BLASTX nr result
ID: Akebia23_contig00034087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00034087
(486 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006845969.1| hypothetical protein AMTR_s03506p00006730, p... 77 2e-12
gb|AEK71755.1| hypothetical chloroplast RF1 [Ficus sp. M. J. Moo... 77 2e-12
gb|AEK71451.1| hypothetical chloroplast RF1 [Celtis occidentalis] 77 2e-12
gb|AEK71444.1| hypothetical chloroplast RF1 [Ceanothus prostratus] 77 2e-12
gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315] 77 2e-12
gb|ACN74144.1| hypothetical protein [Cischweinfia sp. Whitten 2461] 77 2e-12
ref|YP_762318.1| hypothetical chloroplast RF1 [Morus indica] gi|... 77 2e-12
gb|AEK71605.1| hypothetical chloroplast RF1 [Ehretia acuminata] 77 3e-12
gb|ADD30905.1| putative RF1 protein [Ehretia acuminata] 77 3e-12
gb|ACN74000.1| hypothetical protein [Leochilus inconspicuus] 77 3e-12
gb|ACN73990.1| hypothetical protein [Leochilus inconspicuus] 77 3e-12
ref|YP_008999990.1| hypothetical chloroplast RF19 (chloroplast) ... 76 4e-12
ref|YP_005089389.1| ycf1 gene product (chloroplast) [Silene vulg... 76 4e-12
ref|YP_005089632.1| ycf1 gene product (chloroplast) [Silene lati... 76 4e-12
gb|AEK78274.1| hypothetical chloroplast RF1 [Rivina humilis] 76 4e-12
gb|AEK78254.1| hypothetical chloroplast RF1 [Phaulothamnus spine... 76 4e-12
gb|AEK78187.1| hypothetical chloroplast RF1 [Gisekia africana] 76 4e-12
gb|AGM15031.1| Ycf1 (chloroplast) [Panax ginseng] gi|506444557|g... 76 6e-12
gb|AHE41716.1| Ycf1, partial (chloroplast) [Ribes fasciculatum v... 76 6e-12
gb|AHE41714.1| Ycf1, partial (chloroplast) [Philadelphus coronar... 76 6e-12
>ref|XP_006845969.1| hypothetical protein AMTR_s03506p00006730, partial [Amborella
trichopoda] gi|548848703|gb|ERN07644.1| hypothetical
protein AMTR_s03506p00006730, partial [Amborella
trichopoda]
Length = 302
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 104 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 151
>gb|AEK71755.1| hypothetical chloroplast RF1 [Ficus sp. M. J. Moore 315]
Length = 315
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 116 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 163
>gb|AEK71451.1| hypothetical chloroplast RF1 [Celtis occidentalis]
Length = 249
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 118 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 165
>gb|AEK71444.1| hypothetical chloroplast RF1 [Ceanothus prostratus]
Length = 249
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 118 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 165
>gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315]
Length = 1877
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 116 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 163
>gb|ACN74144.1| hypothetical protein [Cischweinfia sp. Whitten 2461]
Length = 351
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T RNSM NLSI CVFLN LICQ FNHFI+PSS + + NIYMFRCNNK
Sbjct: 98 TTRNSMRNLSIQCVFLNNLICQLFNHFIIPSSTLARLVNIYMFRCNNK 145
>ref|YP_762318.1| hypothetical chloroplast RF1 [Morus indica]
gi|118574756|sp|Q09WW0.1|YCF1_MORIN RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|78100373|gb|ABB21014.1| hypothetical chloroplast RF1
[Morus indica]
Length = 1879
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSSM + NIYMFRCNNK
Sbjct: 119 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNK 166
>gb|AEK71605.1| hypothetical chloroplast RF1 [Ehretia acuminata]
Length = 351
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK*VVTLPYFL 370
T RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK + FL
Sbjct: 113 TTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFL 169
>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
Length = 1814
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK*VVTLPYFL 370
T RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK + FL
Sbjct: 113 TTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNKMLFVTSSFL 169
>gb|ACN74000.1| hypothetical protein [Leochilus inconspicuus]
Length = 351
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSS + I NIYMFRCNNK
Sbjct: 98 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARIVNIYMFRCNNK 145
>gb|ACN73990.1| hypothetical protein [Leochilus inconspicuus]
Length = 352
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
TNRNSM NLSI CVFLN LI Q FNHFILPSS + I NIYMFRCNNK
Sbjct: 98 TNRNSMRNLSIQCVFLNNLIFQLFNHFILPSSTLARIVNIYMFRCNNK 145
>ref|YP_008999990.1| hypothetical chloroplast RF19 (chloroplast) [Agrostemma githago]
gi|555944077|gb|AGZ17981.1| hypothetical chloroplast
RF19 (chloroplast) [Agrostemma githago]
Length = 1856
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 118 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 165
>ref|YP_005089389.1| ycf1 gene product (chloroplast) [Silene vulgaris]
gi|329755742|gb|AEC04303.1| hypothetical chloroplast
RF19 (chloroplast) [Silene vulgaris]
Length = 1883
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>ref|YP_005089632.1| ycf1 gene product (chloroplast) [Silene latifolia]
gi|329755577|gb|AEC04140.1| hypothetical chloroplast
RF19 (chloroplast) [Silene latifolia]
Length = 1883
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>gb|AEK78274.1| hypothetical chloroplast RF1 [Rivina humilis]
Length = 194
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>gb|AEK78254.1| hypothetical chloroplast RF1 [Phaulothamnus spinescens]
Length = 212
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>gb|AEK78187.1| hypothetical chloroplast RF1 [Gisekia africana]
Length = 212
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T+RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TSRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>gb|AGM15031.1| Ycf1 (chloroplast) [Panax ginseng] gi|506444557|gb|AGM15117.1| Ycf1
(chloroplast) [Panax ginseng]
gi|506444673|gb|AGM15203.1| Ycf1 (chloroplast) [Panax
ginseng]
Length = 1919
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 119 TTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 166
>gb|AHE41716.1| Ycf1, partial (chloroplast) [Ribes fasciculatum var. chinense]
Length = 195
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 98 TTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 145
>gb|AHE41714.1| Ycf1, partial (chloroplast) [Philadelphus coronarius]
Length = 193
Score = 75.9 bits (185), Expect = 6e-12
Identities = 37/48 (77%), Positives = 39/48 (81%)
Frame = +2
Query: 200 TNRNSMCNLSIYCVFLNKLICQ*FNHFILPSSMFS*ISNIYMFRCNNK 343
T RNSM NLSI CVFLN LI Q FNHFILPSSM + + NIYMFRCNNK
Sbjct: 96 TTRNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYMFRCNNK 143