BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00033210
         (1414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               375   e-101
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   374   e-101
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   370   1e-99
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   368   3e-99
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               363   1e-97
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       362   2e-97
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...   359   2e-96
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   359   2e-96
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   357   5e-96
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           357   5e-96
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                353   1e-94
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   351   4e-94
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   348   4e-93
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   346   2e-92
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   340   9e-91
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   330   7e-88
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             326   2e-86
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   324   7e-86
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   320   7e-85
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   320   1e-84

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  375 bits (963), Expect = e-101
 Identities = 187/455 (41%), Positives = 276/455 (60%), Gaps = 1/455 (0%)
 Frame = +3

Query: 6    ISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLS 185
            I+  QSAF++ R + +N+LL+ E++++YH++    R A+K+D+ KAFDS+ W  L + L 
Sbjct: 205  IAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLV 264

Query: 186  KMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSIL 365
             M F  TF+ WI +CI+T  FSV +NG L GYF+ KRGLRQG  LSPYLFV+ M+VLS +
Sbjct: 265  AMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKM 324

Query: 366  LKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMN 545
            L      +K   HP C    +THL FADDLM+ + G  +S + I E  +EF   SGL+++
Sbjct: 325  LDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRIS 384

Query: 546  STKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARI 725
              KSTL+ A V   +K  I A      G LPV+YLGLPL++ RL S D  P+L+++  RI
Sbjct: 385  LEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRI 444

Query: 726  KSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAM 905
             +W  RF SFAGR  LI+SVL SI  +W + F +P +  ++++ +C+ FLW+G+  +S  
Sbjct: 445  ATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHK 504

Query: 906  HCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFW 1085
              +SW  VCKP  EGGLGL+++K+ N  + L+LVW I +N ++LW KW+ ++ +R K  W
Sbjct: 505  AKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIW 564

Query: 1086 TM-ECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRY 1262
            ++ +     SW WRKILK R +A S  +  + NG   S W++ W   G L      +   
Sbjct: 565  SLKQSTSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGDKGTI 624

Query: 1263 DSTMHSEAMVSALIDNGQWRQHYQRYQQTRLATSL 1367
            D  +  EA V+       W +  +R  +T L   +
Sbjct: 625  DLGIPREASVA-----DAWTRRSRRRHRTSLLNEI 654


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  374 bits (961), Expect = e-101
 Identities = 181/432 (41%), Positives = 263/432 (60%), Gaps = 1/432 (0%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            ++ P QS FI  RRI DNILL+ EII +YH+  G PR    VD+ KA D++ W  +   L
Sbjct: 378  IVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEWDFIIATL 437

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
                 P T + WI  CIS+ KFSV +NG L G+F  +RGLRQGDPLSPYLFV+ MEVLS+
Sbjct: 438  QAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVIAMEVLSL 497

Query: 363  LLKNQVR-NKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQ 539
             ++ ++  +     H  C++  ++HL FADDL++F  G+  S + + +    F++ S L+
Sbjct: 498  CIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLK 557

Query: 540  MNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGA 719
             N ++S +F A V G    S+      S G+ PV+YLG+PLI+S+LR QDC P+LD++  
Sbjct: 558  ANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIET 617

Query: 720  RIKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTS 899
            RIKSW+ + LSFAGR++LI+SVL+SI +YW+S  I+P K+ K +      FLWAG     
Sbjct: 618  RIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWAGNCSGR 677

Query: 900  AMHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKH 1079
            A   V+W  +C P  EGGLG+KD+  WN++ ++  +W + ++  N W  W++ + ++   
Sbjct: 678  AATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNS 737

Query: 1080 FWTMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELR 1259
            FW    P   SW WRK+LK R L  S   + I +G  TSLW + WH  G      P  LR
Sbjct: 738  FWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRATSLWFDNWHPLG------PLTLR 791

Query: 1260 YDSTMHSEAMVS 1295
            + S +  E+ +S
Sbjct: 792  WSSNIIGESGLS 803


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  370 bits (949), Expect = 1e-99
 Identities = 174/408 (42%), Positives = 260/408 (63%), Gaps = 1/408 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAF++ R + +N+LL+ E++++YH++    R A+K+D+ KAFDS+ W  L +  + +GF
Sbjct: 562  QSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGF 621

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            P  F+ WI +CI+T  FSV +NG L GYF+  RGLRQG  LSPYLFV+ M+VLS +L   
Sbjct: 622  PREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKA 681

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
               +    HP C    +THL FADDLM+ + G ++S + I +  +EF  +SGL+++  KS
Sbjct: 682  AAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKS 741

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            T++ A +    +  +      S G LPV+YLGLPLI+ RL + DC P+L+++  RI SW 
Sbjct: 742  TVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWT 801

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             RFLS+AGR+ LI SVL SI  +W + F +P K  +++  MC+ FLW+GT   S    +S
Sbjct: 802  SRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKIS 861

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTM-E 1094
            W  VCKP  EGGLGL+ +K+ N    L+LVW I ++ ++LWVKW+ +  +R   FW + +
Sbjct: 862  WHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQ 921

Query: 1095 CPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQ 1238
               + SW W+K+LK R +A ++ K  + NG  TS W++ W   G L +
Sbjct: 922  TVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLE 969


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  368 bits (945), Expect = 3e-99
 Identities = 183/442 (41%), Positives = 271/442 (61%), Gaps = 1/442 (0%)
 Frame = +3

Query: 6    ISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLS 185
            I+P QSAFI+ R + +N+LL+ E++++YH+     R A+K+D+ KAFD + W  L + L 
Sbjct: 705  IAPNQSAFIKDRLMMENLLLASELVKDYHKESISSRSALKIDISKAFDFVQWPFLINVLK 764

Query: 186  KMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSIL 365
             +  PE F+ WI +CI T  FSV +NG L G+F  +RGLRQG  LSPYL+V+ M VLS +
Sbjct: 765  AIHLPEMFIHWIELCIGTASFSVQVNGELSGFFRSERGLRQGCSLSPYLYVICMNVLSCM 824

Query: 366  LKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMN 545
            L      KKI  HP C    +THL FADD+M+F+ G  KS +      E+F   S L+++
Sbjct: 825  LDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKIS 884

Query: 546  STKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARI 725
              KST+F A +    K SI        G+LPVKYLGLPL++ R+   D  P+++K+ ARI
Sbjct: 885  LEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARI 944

Query: 726  KSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAM 905
             SW  RFLSFAGR++LI+SVL+SI  +W S F +P    +++  M + FLW+G +  +  
Sbjct: 945  TSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKK 1004

Query: 906  HCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFW 1085
              ++W  VCK  +EGGLGLK +K+ N+ ++L+L+W I + +D+LWVKW+ K  +R + FW
Sbjct: 1005 AKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFW 1064

Query: 1086 TM-ECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRY 1262
            ++ E     SW WRKILK R  A    +  + +G  TS WH+ W   G L Q        
Sbjct: 1065 SVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLHQHMGSRGTI 1124

Query: 1263 DSTMHSEAMVSALIDNGQWRQH 1328
            D  + + A V+ +++  + ++H
Sbjct: 1125 DLGIPNNATVAEVMNTHRRKRH 1146


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  363 bits (932), Expect = 1e-97
 Identities = 175/406 (43%), Positives = 255/406 (62%), Gaps = 1/406 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QS+F++ R + +N+LL+ +++++YH++    R A+K+D+ KA DS+ W  L + L+ M F
Sbjct: 115  QSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHF 174

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            PE F+ WI +CI+TP FSV +NG L G+F+  RGLRQG  LSPYLFV+ M+VLS LL   
Sbjct: 175  PEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKV 234

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
            V   +I  HP C    +THL FADDLMI   G  +S + I E  + F  +SGL+++  KS
Sbjct: 235  VGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKS 294

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            T+F A +    +A +  +     G LP++YLGLPL++ RL S D  P+++++  RI SW 
Sbjct: 295  TIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWS 354

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             RFLSFAGR  LI S++ S   +W S F +P    +++  +C+ FLW+GTN  S    +S
Sbjct: 355  SRFLSFAGRFNLISSIIWSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKIS 414

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTM-E 1094
            W +VCKP  EGGLGL+ +K+ N    L+LVW I ++ D+LWVKW++   ++ + FW + E
Sbjct: 415  WNQVCKPKSEGGLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVKE 474

Query: 1095 CPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGIL 1232
                 SW W+KILK R +A    K  + NG  TS W + W   G L
Sbjct: 475  NANLGSWIWKKILKYRGVAKRFCKAEVGNGESTSFWFDDWSLLGRL 520


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  362 bits (929), Expect = 2e-97
 Identities = 175/412 (42%), Positives = 263/412 (63%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            +IS  QSAF+  R +A+N+LL+ +++  Y+ +   PR  +KVDL+KAFDS+ W  +   L
Sbjct: 551  VISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWEFVIAAL 610

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
              +  PE F++WI  CISTP F+VSINGG  G+F+  +GLRQGDPLSPYLFVL ME  S 
Sbjct: 611  RALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSN 670

Query: 363  LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 542
            LL ++  +  I  HP  +  +I+HLMFADD+MIF  G   S   I ETL++F ++SGL++
Sbjct: 671  LLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKV 730

Query: 543  NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGAR 722
            N  KS L+ A ++ QL+++  A      G+LP++YLGLPL++ +LR  + EP+L+K+ AR
Sbjct: 731  NKDKSHLYLAGLN-QLESNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITAR 789

Query: 723  IKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSA 902
             +SW  + LSFAGR++LI SV+     +W STF++P    K++ S+C++FLW+G  + + 
Sbjct: 790  FRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAK 849

Query: 903  MHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHF 1082
               VSW  +C P  EGGLGL+ + +WN++  +RL+W +   KD+LW  W     +    F
Sbjct: 850  GIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSF 909

Query: 1083 WTMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQ 1238
            W +E  +  SW W+++L  R LA   +   + NG     W++ W   G LF+
Sbjct: 910  WAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNWTSLGPLFR 961


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|7267919|emb|CAB78261.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 662

 Score =  359 bits (921), Expect = 2e-96
 Identities = 166/437 (37%), Positives = 267/437 (61%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAFI+ R + +N+LL+ E++++YH++    R A+K+D+ KAFDS+ W  L++ L  + F
Sbjct: 80   QSAFIKDRLLIENLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDF 139

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            P+ FV WI++C++T  FSV +N  L GYF   RGLRQG  L+PYLFV++M+VLS  L   
Sbjct: 140  PQEFVHWIMLCVTTASFSVQVNRELAGYFNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRA 199

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
               +K   HP C    +THL FADD+M+   G ++S + I E  + F   SGL+++  K+
Sbjct: 200  AGLRKFGYHPKCKNLGLTHLSFADDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKT 259

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            T++FA +   +    +     + G LPV+YL LPL++ R  SQD  P+L+++  RI +W 
Sbjct: 260  TIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWT 319

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             RFLS+AGR+ L+ SVL SI  +W S F +P +  ++++ +C+ FLW+G   ++    ++
Sbjct: 320  ARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIA 379

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTMEC 1097
            W+ VC+P +EGGLGL+ +K+ N    L+L+W I +  D+LWV+WI+ + ++   FW+   
Sbjct: 380  WETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRS 439

Query: 1098 PREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTMH 1277
              + SW W+K+LK R  A +  K  I NG   S W++ W  +G L     +  ++D  + 
Sbjct: 440  ASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYDDWSSKGRLIDVLGERGQFDMGIS 499

Query: 1278 SEAMVSALIDNGQWRQH 1328
                ++   D  + R H
Sbjct: 500  KFKTLAEAWDRRRSRYH 516


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  359 bits (921), Expect = 2e-96
 Identities = 172/438 (39%), Positives = 264/438 (60%), Gaps = 1/438 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAF++ R + +N+LL+ E++++YH+    PR AMK+D+ KAFDS+ W+ L + L  + F
Sbjct: 859  QSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNF 918

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            PETF  WI +CIST  FSV +NG L G+F   RGLRQG  LSPYLFV+ M VLS ++   
Sbjct: 919  PETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEA 978

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
              ++ I  HP C +  +THL FADDLM+F  G+  S + +    +EF   SGLQ++  KS
Sbjct: 979  AVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKS 1038

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            T++ A V    +    ++   + G LPV+YLGLPL++ ++ + D  P+++ +  +I SW 
Sbjct: 1039 TIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWT 1098

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R LS+AGR+ L+ SV+ SI  +W S + +P    +++  +C+ FLW+G         ++
Sbjct: 1099 ARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPKKAKIA 1158

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTM-E 1094
            W  +C+P KEGGLG+K + + N+ + L+L+W + + + +LWV WI  F +R   FW+  E
Sbjct: 1159 WSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTFWSANE 1218

Query: 1095 CPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTM 1274
                 SW W+K+LK R LA S+ K  + NG+ TS W++ W H G L          D  +
Sbjct: 1219 RSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITGTRRVIDLGI 1278

Query: 1275 HSEAMVSALIDNGQWRQH 1328
              E  +  ++   Q RQH
Sbjct: 1279 PLETNLETVLRTHQHRQH 1296


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  357 bits (917), Expect = 5e-96
 Identities = 178/440 (40%), Positives = 260/440 (59%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            +I   QSAF+  R +A+N+LL+ E++  Y+R    PR  +KVDL+KAFDS+ W  +   L
Sbjct: 411  VIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAAL 470

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
              +  PE +++WI  CI+TP F++S+NG   G+F   +GLRQGDPLSPYLFVL MEV S 
Sbjct: 471  RALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSK 530

Query: 363  LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 542
            LL ++  +  I  HP   + +I+HLMFADD+MIF  G   S   I ETL++F ++SGL++
Sbjct: 531  LLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKV 590

Query: 543  NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGAR 722
            N  KS LF A +    + +  A      G+ P++YLGLPL+  +LR  D  P+L+KL AR
Sbjct: 591  NKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSAR 649

Query: 723  IKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSA 902
            ++SW  + LSFAGR +LI SV+  +  +W STF++P    KK+ S+C+KFLWAG+     
Sbjct: 650  LRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709

Query: 903  MHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHF 1082
               VSW   C P  EGGLG +   +WN++ +LRL+W++     +LW +W +  ++    F
Sbjct: 710  SSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASF 769

Query: 1083 WTMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRY 1262
            W +   +   W W+ +L  R LA   IK  + NG   S W + W   G L ++       
Sbjct: 770  WQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSR 829

Query: 1263 DSTMHSEAMVSALIDNGQWR 1322
               +   A V+  ID   WR
Sbjct: 830  PLRIPFSAKVADAIDGSGWR 849


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  357 bits (917), Expect = 5e-96
 Identities = 178/440 (40%), Positives = 260/440 (59%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            +I   QSAF+  R +A+N+LL+ E++  Y+R    PR  +KVDL+KAFDS+ W  +   L
Sbjct: 411  VIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAAL 470

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
              +  PE +++WI  CI+TP F++S+NG   G+F   +GLRQGDPLSPYLFVL MEV S 
Sbjct: 471  RALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVLAMEVFSK 530

Query: 363  LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 542
            LL ++  +  I  HP   + +I+HLMFADD+MIF  G   S   I ETL++F ++SGL++
Sbjct: 531  LLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKV 590

Query: 543  NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGAR 722
            N  KS LF A +    + +  A      G+ P++YLGLPL+  +LR  D  P+L+KL AR
Sbjct: 591  NKDKSQLFQAGLDLSERIT-SAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSAR 649

Query: 723  IKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSA 902
            ++SW  + LSFAGR +LI SV+  +  +W STF++P    KK+ S+C+KFLWAG+     
Sbjct: 650  LRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRK 709

Query: 903  MHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHF 1082
               VSW   C P  EGGLG +   +WN++ +LRL+W++     +LW +W +  ++    F
Sbjct: 710  SSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHASF 769

Query: 1083 WTMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRY 1262
            W +   +   W W+ +L  R LA   IK  + NG   S W + W   G L ++       
Sbjct: 770  WQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTVSFWFDCWTSLGPLIKYLGDVGSR 829

Query: 1263 DSTMHSEAMVSALIDNGQWR 1322
               +   A V+  ID   WR
Sbjct: 830  PLRIPFSAKVADAIDGSGWR 849


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  353 bits (905), Expect = 1e-94
 Identities = 169/438 (38%), Positives = 267/438 (60%), Gaps = 1/438 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAF++ R + +N+LL+ E++++YH++   PR AMK+D+ KAFDS+ W+ L + L  + F
Sbjct: 135  QSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNF 194

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            PE F  WI +CIST  FSV +NG L G+F  KRGLRQG  LSPYLFV+ M VLS ++   
Sbjct: 195  PENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVA 254

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
              ++ I  HP C + ++THL FADDLM+F  G  +S + +    +EF   SGL ++  KS
Sbjct: 255  AVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKS 314

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            TL+ A V    + +I +    + G LPV+YLGLPL++ ++ + D  P+LDK+ ++I SW 
Sbjct: 315  TLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWT 374

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R LS+AGR+ LI SV+ S+  +W S + +P    K++  +C+ FLW+G         ++
Sbjct: 375  ARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKIT 434

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTM-E 1094
            W  +CK  +EGGLG+K + + N+ + L+L+W + + + +LWV W+  + +R   FW+  +
Sbjct: 435  WTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSAND 494

Query: 1095 CPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTM 1274
                 SW W+K+LK R +A S+ K  I +G+ TS W++ W   G L          D  +
Sbjct: 495  RSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVDVTNARRTIDMGI 554

Query: 1275 HSEAMVSALIDNGQWRQH 1328
               A V+ ++ + + + H
Sbjct: 555  PLAATVATVLASHRTKHH 572


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  351 bits (901), Expect = 4e-94
 Identities = 181/451 (40%), Positives = 261/451 (57%)
 Frame = +3

Query: 6    ISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLS 185
            ISP QSAF++ R + +N+LL+ E+++ + +     R  +KVDLRKAFDS+ W  + + L 
Sbjct: 551  ISPSQSAFVKGRLLTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLK 610

Query: 186  KMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSIL 365
                P  FV+WI  CI++  FS++++G L GYF+G +GLRQGDPLSP LFV+ ME+LS L
Sbjct: 611  AANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRL 670

Query: 366  LKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMN 545
            L+N+  +  I  HP  +E  I+ L FADDLMIF  G   S + I+  LE FKN SGL+MN
Sbjct: 671  LENKFSDGSIGYHPKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMN 730

Query: 546  STKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARI 725
            + KS ++ A +    K    A      G+ P +YLGLPL+  +LR  D   ++DK+ AR 
Sbjct: 731  TEKSAVYTAGLEDTDKEDTLA-FGFVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARF 789

Query: 726  KSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAM 905
              W  + LSFAGR++LI SV+ S   +W S+FI+P    K +  MC +FLW         
Sbjct: 790  NHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGD 849

Query: 906  HCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFW 1085
              VSWQ  C P  EGGLGL++   WN++  LRL+WM+ A +D+LWV W    ++R  +FW
Sbjct: 850  IKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFW 909

Query: 1086 TMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYD 1265
              E     SW W+ IL  R LA   ++ ++ NG   S W++ W + G L +         
Sbjct: 910  NAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAIGASGPQL 969

Query: 1266 STMHSEAMVSALIDNGQWRQHYQRYQQTRLA 1358
            + +H  A+V+    +  W     R +   LA
Sbjct: 970  TGIHESAVVTEASSSTGWILPSARTRNASLA 1000


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  348 bits (892), Expect = 4e-93
 Identities = 177/439 (40%), Positives = 264/439 (60%), Gaps = 1/439 (0%)
 Frame = +3

Query: 6    ISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLS 185
            IS  QSAF+  R   +N+LL+ E++  Y++    P   +KVDLRKAFDS+ W  +   L 
Sbjct: 449  ISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRWDFIVSALR 508

Query: 186  KMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSIL 365
             +  PE F  WIL C+ST  FSV +NG   G+F   +GLRQGDP+SPYLFVL MEV S L
Sbjct: 509  ALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGL 568

Query: 366  LKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMN 545
            L+++  +  I  HP  ++  I+HLMFADD+MIF  G   S   I E+LE+F  +SGL MN
Sbjct: 569  LQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMN 628

Query: 546  STKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARI 725
            + K+ L+ A +  Q ++   A+     GSLPV+YLGLPL+S +L   +  P+++K+ AR 
Sbjct: 629  TNKTQLYHAGL-SQSESDSMASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARF 687

Query: 726  KSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAM 905
             SW  R LSFAGRV+L+ SV++ I  +W S+FI+P    KK+ S+C++FLW+       +
Sbjct: 688  NSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSRIDKKGI 747

Query: 906  HCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKV-RTKHF 1082
              V+W +VC P  EGG+GL+     N++  LR++W++ +N  +LWV W ++  + ++  F
Sbjct: 748  AKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAWHKQHSLGKSTSF 807

Query: 1083 WTMECPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRY 1262
            W        SW W+ +L+ R +A   I+ ++ NG D S W + W   G L ++   E   
Sbjct: 808  WNQPEKPHDSWNWKCLLRLRVVAERFIRCNVGNGRDASFWFDNWTPFGPLIKFLGNEGPR 867

Query: 1263 DSTMHSEAMVSALIDNGQW 1319
            D  +H  A +S +  +  W
Sbjct: 868  DLRVHLNAKISDVCTSEGW 886


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  346 bits (887), Expect = 2e-92
 Identities = 167/406 (41%), Positives = 249/406 (61%), Gaps = 1/406 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAF++ R + +N+LL+ E++++YH++    R AMK+D+ KAFDSL W  L   L+ M F
Sbjct: 283  QSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNF 342

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            P  F+ WI +C+ST  FS+ +NG L GYF   RGLRQG  LSPYLFV+ M+VLS +L   
Sbjct: 343  PGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKA 402

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
               ++   HP C    +THL FADDLMI   G ++S   I + L +F    GL++   K+
Sbjct: 403  AGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKT 462

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            TL+ A V    +  + +      G LPV+YLGLPL++ RL + D  P++D++  RI  W 
Sbjct: 463  TLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWT 522

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R+LSFAGR+ LI SVL SI  +W + F +P +   ++N + +  LW+G         VS
Sbjct: 523  SRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVS 582

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTMEC 1097
            W  +CKP KEGGLGL+ +++ N+ + L+L+W + + +D+LWVKW +   ++ + FW++  
Sbjct: 583  WDEICKPKKEGGLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGT 642

Query: 1098 PRE-ASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGIL 1232
                 SW WR++LK R +A S  K  + NG +TS W + W  +G L
Sbjct: 643  HSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDNWSEKGPL 688


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  340 bits (872), Expect = 9e-91
 Identities = 164/438 (37%), Positives = 263/438 (60%), Gaps = 1/438 (0%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            QSAF++ R + +N+LL+ E++++YH++   PR AMK+D+ KAFDS+ W+ L + L  + F
Sbjct: 704  QSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALKF 763

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            PE F  WI +CIST  FSV +N    G+F  KRGLRQG  LSPYLFV+ M VLS ++   
Sbjct: 764  PEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVA 823

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
              ++ I  HP C + ++THL FADDLM+F  G  +S + +    ++F   SGL ++  KS
Sbjct: 824  AVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKS 883

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            TL+ A V    + +I +    + G LPV+YLG PL++ ++ + D  P+LDK+ ++I SW 
Sbjct: 884  TLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWT 943

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R LS+AGR+ LI SV+ S+  +W S + +P    K++  +C+ FLW+G         ++
Sbjct: 944  ARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKIT 1003

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTM-E 1094
            W  +CK  +EGGLG+K + + N+ + L+L+W + + + +LWV W+  + +R   FW+  +
Sbjct: 1004 WTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWSAND 1063

Query: 1095 CPREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGILFQWFPQELRYDSTM 1274
                 SW W+K+L  R +A S+ K  I +G+ TS W++ W     L          D  +
Sbjct: 1064 RSSLGSWMWKKLLNYRDVAKSMCKVEIKSGSSTSFWYDNWSQLRQLVDVTNARRTIDMGI 1123

Query: 1275 HSEAMVSALIDNGQWRQH 1328
               A V+ ++ + + +QH
Sbjct: 1124 PLAATVATVLASHRTKQH 1141


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  330 bits (847), Expect = 7e-88
 Identities = 168/405 (41%), Positives = 236/405 (58%), Gaps = 2/405 (0%)
 Frame = +3

Query: 120  MKVDLRKAFDSLNWRALQDCLSKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRG 299
            MK+D+ KAFDSL W  L + LS M FP  F+ WI  CI+T  FSV +NG L GYF   RG
Sbjct: 1    MKIDISKAFDSLQWSFLINALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARG 60

Query: 300  LRQGDPLSPYLFVLMMEVLSILLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNM 479
            +RQG  LSPYLFV+ MEVLS +L      K+   HP C    +THL FADDLMI   G +
Sbjct: 61   IRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKV 120

Query: 480  KSAKAIRETLEEFKNYSGLQMNSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLP 659
            +S   I E +  F   SGLQ+N  K+TL+ A V    +  + +      G LPV+YLGLP
Sbjct: 121  RSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLP 180

Query: 660  LISSRLRSQDCEPILDKLGARIKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKI 839
            L++ RL  +D  P+ +++  RI +W  R+LSFAGR+ LI SVL S   +W S F +P+  
Sbjct: 181  LVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSAC 240

Query: 840  TKKVNSMCAKFLWAGTNKTSAMHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIA 1019
             K++NS+C+ FLW+G         VSW  +CKP +EGGLGL+ + + N  ++L+L+W + 
Sbjct: 241  LKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVT 300

Query: 1020 ANKDNLWVKWIQKFKVRTKHFWTMECPREA--SWAWRKILKARFLASSIIKHSIANGNDT 1193
            +N D+LWVKW +   ++ + FW++  P  +  SW W+K+LK R  A    +  + NG  T
Sbjct: 301  SNDDSLWVKWSKMNLLKQESFWSL-TPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGART 359

Query: 1194 SLWHEPWHHQGILFQWFPQELRYDSTMHSEAMVSALIDNGQWRQH 1328
            S W + W   G L     Q  + D  +     V+    N + R+H
Sbjct: 360  SFWFDNWSGMGHLMDVTGQRGQIDLGISRNKTVAEAWSNRRRRKH 404


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  326 bits (835), Expect = 2e-86
 Identities = 151/359 (42%), Positives = 238/359 (66%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            Q+AF++ R + +N+LL+ E++++YH+     R A+K+D+ KAF+S+ W  +++ L  M F
Sbjct: 89   QTAFVKDRLLIENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDF 148

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            P  FV WI++CIST  FSV +NG L G+F+ KRGLRQG  LSPYLFV+ M+VLS LL   
Sbjct: 149  PMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQA 208

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
               KK   H  C E ++THL FADDLM+ + G ++S   I E  + F  +SGL+++  KS
Sbjct: 209  ASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKS 268

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
            T++ A V   +   I+   Q   G LPV+YLGLPL++ RL + D  P+L+ +  +I +W 
Sbjct: 269  TIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWT 328

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R+LS+AGR+ LI SVL SI  +W + F +P +  ++++ +C+ FLW+G +       V 
Sbjct: 329  TRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVC 388

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTME 1094
            W  VCKP +EGGLGL+ +K+ N+ + L+L+W I ++ ++LWV+WI+++ ++   FW+++
Sbjct: 389  WGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQ 447


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  324 bits (830), Expect = 7e-86
 Identities = 152/382 (39%), Positives = 230/382 (60%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            ++   Q+ FI  R I DNILL+ E+IR Y+R    PR  +KVD+RKA+DS+ W  L+  L
Sbjct: 545  VVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESML 604

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
             ++GFP  F+ WI+ C+ T  +S+ +NG     F+ ++GLRQGDPLSP+LF L ME LS 
Sbjct: 605  KELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSR 664

Query: 363  LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 542
             + N  ++ + + HP C    +THLMFADDL++FA+ +  S   I      F   SGLQ 
Sbjct: 665  CMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQA 724

Query: 543  NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGAR 722
            +  KS ++F  V  +    +   +Q   GSLP +YLG+PL S +L    C+P++DK+  R
Sbjct: 725  SIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTR 784

Query: 723  IKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSA 902
             + W    LS+AGR++L++++L S+  YW   F +P K+ K V + C KFLW GT  TS 
Sbjct: 785  AQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGTVDTSY 844

Query: 903  MHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHF 1082
               V+W  + +P   GGL + +M  WN++AIL+L+W I   +D LWV+W+  + ++ ++ 
Sbjct: 845  KAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNI 904

Query: 1083 WTMECPREASWAWRKILKARFL 1148
              +      SW  RKI ++R L
Sbjct: 905  ENVTVSSNTSWILRKIFESREL 926


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  320 bits (821), Expect = 7e-85
 Identities = 144/361 (39%), Positives = 226/361 (62%)
 Frame = +3

Query: 3    MISPCQSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCL 182
            +IS  Q+ FI  R+I DNI+L+HE+++ Y R    PR  +K+DL KA+DS+ W  L+  +
Sbjct: 350  IISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFLEQVM 409

Query: 183  SKMGFPETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSI 362
              +GFP+ F  W++ C+ T  +++ +NG     F+  +GLRQGDP+SP+LF + ME LS 
Sbjct: 410  EGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAMEYLSR 469

Query: 363  LLKNQVRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQM 542
            LLK    +K    HP   +  +THL FADDL++F++G++ S KA+++   EF   SGLQ 
Sbjct: 470  LLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQA 529

Query: 543  NSTKSTLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGAR 722
            N  KS+++   V  +++  I   L  +   LP KYLG+PL S +L +    P+++K+ AR
Sbjct: 530  NLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMAR 589

Query: 723  IKSWKGRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSA 902
            I SW  + LS+AGR +L+++VL  +   W+  FIIP KI K +  +C  +LW+G    + 
Sbjct: 590  INSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTK 649

Query: 903  MHCVSWQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHF 1082
               ++W +VC P  EGGLGL ++K WN+SA+ +L W +A  +D LW+KWI  + ++ +  
Sbjct: 650  KALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQRE 709

Query: 1083 W 1085
            W
Sbjct: 710  W 710


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1| AT4g02490
            [Arabidopsis thaliana]
          Length = 657

 Score =  320 bits (819), Expect = 1e-84
 Identities = 152/405 (37%), Positives = 239/405 (59%)
 Frame = +3

Query: 18   QSAFIQARRIADNILLSHEIIRNYHRNKGCPRFAMKVDLRKAFDSLNWRALQDCLSKMGF 197
            Q  FI+ R + +N+LL+ E++ N+       R  ++VDL KA+D++NW  L + L  +  
Sbjct: 103  QVGFIKGRLLCENVLLASELVDNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNL 162

Query: 198  PETFVDWILMCISTPKFSVSINGGLKGYFEGKRGLRQGDPLSPYLFVLMMEVLSILLKNQ 377
            P  F++WI +CISTP +S++ NG L G+F GK+G+RQGDP+S +LFVL+M++L+  L   
Sbjct: 163  PPIFINWIWVCISTPSYSIAYNGELIGFFVGKKGIRQGDPMSSHLFVLVMDILARSLDLG 222

Query: 378  VRNKKIDLHPLCNEPTITHLMFADDLMIFAKGNMKSAKAIRETLEEFKNYSGLQMNSTKS 557
                +  LHP C  P ITHL FADD+++F  G++ S  AI + L+ FK  SGL +N  K+
Sbjct: 223  AVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKT 282

Query: 558  TLFFAAVHGQLKASIKANLQCSEGSLPVKYLGLPLISSRLRSQDCEPILDKLGARIKSWK 737
             L     + +    + A+L  S+GSLPV+YLG+PL+S +++  D +P++D++ +R  SW 
Sbjct: 283  ALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWT 342

Query: 738  GRFLSFAGRVELIRSVLNSIHIYWSSTFIIPTKITKKVNSMCAKFLWAGTNKTSAMHCVS 917
             R LSFAGR++L++SV+ S   +W+S FI+P +   K+  MC  FLW+G   ++    +S
Sbjct: 343  ARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLWSGAPNSAREAKIS 402

Query: 918  WQRVCKPTKEGGLGLKDMKQWNQSAILRLVWMIAANKDNLWVKWIQKFKVRTKHFWTMEC 1097
            W  VC   + GGLGLK +  WN+   L+L+W++     +LWV W++              
Sbjct: 403  WDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSWVR-------------- 448

Query: 1098 PREASWAWRKILKARFLASSIIKHSIANGNDTSLWHEPWHHQGIL 1232
                 W WRK+ K R +A   +   + +G     W + W   G L
Sbjct: 449  -----WVWRKLCKLREVARPFVICEVGSGITARFWQDNWTGHGPL 488