BLASTX nr result

ID: Akebia23_contig00033025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00033025
         (778 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC17829.1| E3 ubiquitin-protein ligase RING1-like protein [M...    55   2e-06
ref|XP_004306138.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    50   2e-06
ref|XP_006827275.1| hypothetical protein AMTR_s00010p00263520 [A...    48   4e-06
ref|XP_007046174.1| Zinc finger-like protein [Theobroma cacao] g...    47   4e-06
ref|XP_007046159.1| Zinc finger-like protein [Theobroma cacao] g...    48   5e-06
ref|XP_006476564.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    49   7e-06

>gb|EXC17829.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
          Length = 289

 Score = 55.5 bits (132), Expect(2) = 2e-06
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = +3

Query: 624 CAHMFHSNCILEWLKQKPTCPLCRFTLP 707
           C+HMFHS+CI+EWL +  TCPLCRF+LP
Sbjct: 260 CSHMFHSDCIVEWLNKSHTCPLCRFSLP 287



 Score = 23.5 bits (49), Expect(2) = 2e-06
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 569 CGVCLEEMKVGVEAMNM 619
           C +C+EE+K+G     M
Sbjct: 242 CSICMEEVKIGSHITRM 258


>ref|XP_004306138.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
           subsp. vesca]
          Length = 126

 Score = 50.1 bits (118), Expect(2) = 2e-06
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +3

Query: 624 CAHMFHSNCILEWLKQKPTCPLCRFTLP 707
           C H FHS+CI  WL+ + +CPLCRFT+P
Sbjct: 86  CTHRFHSDCIENWLRMRASCPLCRFTMP 113



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 542 VCIIDDGDTCGVCLEEMKVGVEAMNM 619
           V + ++G  C +CLE  KV  EA  M
Sbjct: 59  VIVTEEGTDCSICLESFKVSGEAKEM 84


>ref|XP_006827275.1| hypothetical protein AMTR_s00010p00263520 [Amborella trichopoda]
           gi|548831704|gb|ERM94512.1| hypothetical protein
           AMTR_s00010p00263520 [Amborella trichopoda]
          Length = 266

 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +3

Query: 624 CAHMFHSNCILEWLKQKPTCPLCRFTLP 707
           C H +HS CIL WLK   TCP+CRF +P
Sbjct: 167 CLHKYHSECILPWLKLHSTCPVCRFQMP 194



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 548 IIDDGDTCGVCLEEMKVGVEAMNM 619
           I + G  C +CLE+ +VGVEA  M
Sbjct: 142 ISESGLVCSICLEDFEVGVEAKEM 165


>ref|XP_007046174.1| Zinc finger-like protein [Theobroma cacao]
           gi|508710109|gb|EOY02006.1| Zinc finger-like protein
           [Theobroma cacao]
          Length = 254

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = +3

Query: 624 CAHMFHSNCILEWLKQKPTCPLCRFTLP 707
           C+H FH +CI +WLKQ   CP+CRF +P
Sbjct: 226 CSHTFHGDCIEKWLKQSHYCPVCRFEMP 253



 Score = 31.2 bits (69), Expect(2) = 4e-06
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 560 GDTCGVCLEEMKVGVEAMNM 619
           GD C +CLEE+KVG +A  M
Sbjct: 205 GDNCVICLEELKVGSDASQM 224


>ref|XP_007046159.1| Zinc finger-like protein [Theobroma cacao]
           gi|508710094|gb|EOY01991.1| Zinc finger-like protein
           [Theobroma cacao]
          Length = 257

 Score = 48.1 bits (113), Expect(2) = 5e-06
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 624 CAHMFHSNCILEWLKQKPTCPLCRFTLP 707
           C+H+FH +C+ EWLKQ   CP+CRF +P
Sbjct: 228 CSHIFHGDCLEEWLKQSHYCPVCRFEMP 255



 Score = 29.3 bits (64), Expect(2) = 5e-06
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 557 DGDTCGVCLEEMKVGVEAMNM 619
           + + C +CLEE+KVG EA  M
Sbjct: 206 EAENCVICLEELKVGSEASRM 226


>ref|XP_006476564.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
          Length = 120

 Score = 48.9 bits (115), Expect(2) = 7e-06
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +3

Query: 621 GCAHMFHSNCILEWLKQKPTCPLCRFTL 704
           GC+HM+H NCI+ WLK   +CPLCR  L
Sbjct: 87  GCSHMYHDNCIVRWLKNNNSCPLCRHRL 114



 Score = 28.1 bits (61), Expect(2) = 7e-06
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 467 LIRHGKNKQSMGFWEFFSETWHLRRVCIIDDGD-TCGVCLEEMKVGVEAMNMG 622
           LI H +  +S    E      +L+RV I +    +C +CLEE  VG EA  +G
Sbjct: 35  LIDHRQELRSRRRDESKQANTNLKRVKIEESQSCSCAICLEEFSVGSEACCVG 87


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