BLASTX nr result

ID: Akebia23_contig00031489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00031489
         (224 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525397.1| Signal recognition particle receptor subunit...    60   2e-07
gb|EXB82566.1| Signal recognition particle receptor subunit beta...    56   6e-06
ref|XP_006438326.1| hypothetical protein CICLE_v10032463mg [Citr...    55   8e-06

>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
           [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
           recognition particle receptor subunit beta, putative
           [Ricinus communis]
          Length = 259

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/73 (46%), Positives = 40/73 (54%)
 Frame = +2

Query: 5   MEGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIHFFRRTKSYTIVL 184
           MEG++Q  N+  QWL +  +   +IP                    I FFRRTKS TIVL
Sbjct: 1   MEGVEQWKNEAKQWLQQGIEFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVL 60

Query: 185 AGLSGSGKTVLFY 223
            GLSGSGKTVLFY
Sbjct: 61  TGLSGSGKTVLFY 73


>gb|EXB82566.1| Signal recognition particle receptor subunit beta [Morus notabilis]
          Length = 259

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/73 (41%), Positives = 39/73 (53%)
 Frame = +2

Query: 5   MEGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIHFFRRTKSYTIVL 184
           MEG ++  +Q  QW ++  Q I +IP                    +  F+RTKS TIVL
Sbjct: 1   MEGFEEWKSQAEQWASQALQYIHQIPPNQLYAASGVLLFTILFLFFVRLFKRTKSNTIVL 60

Query: 185 AGLSGSGKTVLFY 223
            GLSG+GKTVLFY
Sbjct: 61  TGLSGAGKTVLFY 73


>ref|XP_006438326.1| hypothetical protein CICLE_v10032463mg [Citrus clementina]
           gi|568860798|ref|XP_006483901.1| PREDICTED: signal
           recognition particle receptor subunit beta-like [Citrus
           sinensis] gi|557540522|gb|ESR51566.1| hypothetical
           protein CICLE_v10032463mg [Citrus clementina]
          Length = 263

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/72 (44%), Positives = 38/72 (52%)
 Frame = +2

Query: 8   EGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIHFFRRTKSYTIVLA 187
           EG++Q      +WLNR  + I +IP                    +  FRR KS TIVLA
Sbjct: 6   EGMEQWKKDLEEWLNRGIEFINQIPPTQLYIACAVLLLTTALLLLLQVFRRKKSNTIVLA 65

Query: 188 GLSGSGKTVLFY 223
           GLSGSGKTVLFY
Sbjct: 66  GLSGSGKTVLFY 77


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