BLASTX nr result
ID: Akebia23_contig00031181
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00031181
(463 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prun... 117 1e-24
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 115 6e-24
emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera] 111 9e-23
ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Popu... 110 3e-22
ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Popu... 110 3e-22
ref|XP_002314781.2| metallo-beta-lactamase family protein [Popul... 110 3e-22
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 105 9e-21
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr... 105 9e-21
gb|EXC54202.1| hypothetical protein L484_001390 [Morus notabilis] 104 1e-20
ref|XP_007045271.1| Cleavage and polyadenylation specificity fac... 102 4e-20
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 97 2e-18
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 95 9e-18
ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 92 7e-17
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec... 91 1e-16
gb|AAS80153.1| ACT11D09.9 [Cucumis melo] 91 2e-16
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 82 8e-14
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 75 9e-12
gb|EYU39703.1| hypothetical protein MIMGU_mgv1a002729mg [Mimulus... 69 5e-10
ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Caps... 68 1e-09
ref|NP_178282.2| cleavage and polyadenylation specificity factor... 67 2e-09
>ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
gi|462422065|gb|EMJ26328.1| hypothetical protein
PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 117 bits (294), Expect = 1e-24
Identities = 67/147 (45%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = -1
Query: 454 DSQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHL 275
+S++ N P ++ +ERV+EGVLVME+ K+AK+V QDELL ++G K+H VQFAYCCP +
Sbjct: 486 NSRNNNFTPRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVQFAYCCPADI 545
Query: 274 HGLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWS-LLHQLFLKISSELDGVRIQ 98
L K SS+ N+ L S+ S LL QL K+S+E IQ
Sbjct: 546 GHLGETK-----------------SSTTNDGQLCKSETCSRLLRQLSAKLSNEFSQGNIQ 588
Query: 97 EFSDHLQLESFNVSICSNGNCPYKIKD 17
+F DHLQ+ESF+VSIC NCPY++ D
Sbjct: 589 DFEDHLQVESFHVSICLKNNCPYRLMD 615
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 115 bits (288), Expect = 6e-24
Identities = 62/145 (42%), Positives = 85/145 (58%)
Frame = -1
Query: 451 SQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLH 272
S + +P ++ ++RV+EG+LVMEK K+AK+V QDEL ++G K+H V+FAYCCP H
Sbjct: 477 SSNSKSIPRLRVSDDRVAEGILVMEKNKKAKVVHQDELPLMLGEKKHQVKFAYCCPAH-- 534
Query: 271 GLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEF 92
I +S EN +L S N LL K+++EL IQ F
Sbjct: 535 ---------------------IGNSQENTSLPLSSTNNDLLQLFSAKLANELSEGNIQHF 573
Query: 91 SDHLQLESFNVSICSNGNCPYKIKD 17
DHLQLES +VSICSN +CPY++ D
Sbjct: 574 GDHLQLESIHVSICSNNDCPYRLSD 598
>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
Length = 328
Score = 111 bits (278), Expect = 9e-23
Identities = 61/149 (40%), Positives = 91/149 (61%)
Frame = -1
Query: 463 SILDSQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCP 284
S L S++ Q+ +ERV+EG+L++EK+K+AK+V Q+ELL +IG +H VQFAYCCP
Sbjct: 159 SNLVSKETKATSXLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCP 218
Query: 283 IHLHGLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVR 104
+ + LE K +D + N ++ SD S LHQLF K+S++L G
Sbjct: 219 VQIGNLERTK--------------GMDFALSKN-VVSTSDECSWLHQLFAKLSTKLGG-N 262
Query: 103 IQEFSDHLQLESFNVSICSNGNCPYKIKD 17
IQ+F HLQ++S ++S+C CPY+ D
Sbjct: 263 IQDFGQHLQVDSIHISVCLKDICPYRTTD 291
>ref|XP_006378435.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329588|gb|ERP56232.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 368
Score = 110 bits (274), Expect = 3e-22
Identities = 56/144 (38%), Positives = 85/144 (59%)
Frame = -1
Query: 448 QDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHG 269
++ NP Q+ +ERV+EG+L+MEK K+A++V QD+LL ++ K+H VQFAYCC L
Sbjct: 228 RNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQL-- 285
Query: 268 LEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFS 89
+N++ + + L SD S L LF ++S+ GV I++
Sbjct: 286 ------------------DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLG 327
Query: 88 DHLQLESFNVSICSNGNCPYKIKD 17
+HLQ+ESF+VS+C NCPY+I D
Sbjct: 328 EHLQVESFHVSVCLKDNCPYRIID 351
>ref|XP_006378434.1| hypothetical protein POPTR_0010s11650g [Populus trichocarpa]
gi|550329587|gb|ERP56231.1| hypothetical protein
POPTR_0010s11650g [Populus trichocarpa]
Length = 464
Score = 110 bits (274), Expect = 3e-22
Identities = 56/144 (38%), Positives = 85/144 (59%)
Frame = -1
Query: 448 QDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHG 269
++ NP Q+ +ERV+EG+L+MEK K+A++V QD+LL ++ K+H VQFAYCC L
Sbjct: 324 RNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQL-- 381
Query: 268 LEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFS 89
+N++ + + L SD S L LF ++S+ GV I++
Sbjct: 382 ------------------DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLG 423
Query: 88 DHLQLESFNVSICSNGNCPYKIKD 17
+HLQ+ESF+VS+C NCPY+I D
Sbjct: 424 EHLQVESFHVSVCLKDNCPYRIID 447
>ref|XP_002314781.2| metallo-beta-lactamase family protein [Populus trichocarpa]
gi|550329586|gb|EEF00952.2| metallo-beta-lactamase
family protein [Populus trichocarpa]
Length = 625
Score = 110 bits (274), Expect = 3e-22
Identities = 56/144 (38%), Positives = 85/144 (59%)
Frame = -1
Query: 448 QDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHG 269
++ NP Q+ +ERV+EG+L+MEK K+A++V QD+LL ++ K+H VQFAYCC L
Sbjct: 485 RNTNPTAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQL-- 542
Query: 268 LEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFS 89
+N++ + + L SD S L LF ++S+ GV I++
Sbjct: 543 ------------------DNLEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLG 584
Query: 88 DHLQLESFNVSICSNGNCPYKIKD 17
+HLQ+ESF+VS+C NCPY+I D
Sbjct: 585 EHLQVESFHVSVCLKDNCPYRIID 608
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 105 bits (261), Expect = 9e-21
Identities = 58/144 (40%), Positives = 87/144 (60%)
Frame = -1
Query: 433 LPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMK 254
LPL I++ERV+EG+LV+EK+++AK+V QDELL ++G K H VQFAYCCP+++ LE
Sbjct: 486 LPLW-IKDERVAEGILVLEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKF- 543
Query: 253 PHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQL 74
S + +L + SL+ L K+S +L IQ+F +HLQ+
Sbjct: 544 --------------TTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQV 589
Query: 73 ESFNVSICSNGNCPYKIKDCVGSK 2
ESF++S+C CPY+I + + K
Sbjct: 590 ESFHLSVCLKDTCPYRITNGLEDK 613
>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
gi|557550770|gb|ESR61399.1| hypothetical protein
CICLE_v10014563mg [Citrus clementina]
Length = 646
Score = 105 bits (261), Expect = 9e-21
Identities = 58/144 (40%), Positives = 87/144 (60%)
Frame = -1
Query: 433 LPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMK 254
LPL I++ERV+EG+LV+EK+++AK+V QDELL ++G K H VQFAYCCP+++ LE
Sbjct: 486 LPLW-IKDERVAEGILVLEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKF- 543
Query: 253 PHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQL 74
S + +L + SL+ L K+S +L IQ+F +HLQ+
Sbjct: 544 --------------TTTSLTPTARMLRDPNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQV 589
Query: 73 ESFNVSICSNGNCPYKIKDCVGSK 2
ESF++S+C CPY+I + + K
Sbjct: 590 ESFHLSVCLKDTCPYRITNGLEDK 613
>gb|EXC54202.1| hypothetical protein L484_001390 [Morus notabilis]
Length = 244
Score = 104 bits (260), Expect = 1e-20
Identities = 56/140 (40%), Positives = 80/140 (57%)
Frame = -1
Query: 421 QIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKPHAP 242
Q+ +ERV+EG+ VMEK K+AK+V QDELL ++G K+H VQ AYCCPIH+
Sbjct: 75 QVTDERVAEGIFVMEKGKKAKVVHQDELLLMLGEKQHIVQHAYCCPIHVKN--------- 125
Query: 241 SVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLESFN 62
E+ D + NN L +D F + E +++F +HLQ+ESF+
Sbjct: 126 --------SESADHTLVNNVLC-ITDRCFWHRLFFAVLCDEFSDGNVRDFGEHLQVESFH 176
Query: 61 VSICSNGNCPYKIKDCVGSK 2
+SICS +CPY+I D +K
Sbjct: 177 LSICSKDSCPYRITDSAQNK 196
>ref|XP_007045271.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao] gi|508709206|gb|EOY01103.1| Cleavage
and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 102 bits (255), Expect = 4e-20
Identities = 58/145 (40%), Positives = 86/145 (59%)
Frame = -1
Query: 451 SQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLH 272
S D +P Q+ +ERV+EG+LV+EK K+AK++ QDELL ++G +H VQFAYC P+
Sbjct: 483 SNDSKAIPGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTE 542
Query: 271 GLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEF 92
LE + E++ S+ + LL D +L+ L K+S+EL IQ+
Sbjct: 543 RLEKTRS------------EDLPSADD---LLCGLDKCTLISLLSTKLSNELSDGNIQDL 587
Query: 91 SDHLQLESFNVSICSNGNCPYKIKD 17
+ LQ+ESF +SIC NCP++I D
Sbjct: 588 GEQLQVESFCLSICLKDNCPHRISD 612
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 97.1 bits (240), Expect = 2e-18
Identities = 56/149 (37%), Positives = 84/149 (56%)
Frame = -1
Query: 463 SILDSQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCP 284
S L S++ + Q+ +ERV+EG+L++EK+K+AK+V Q+ELL +IG +H VQFAYCCP
Sbjct: 535 SNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCP 594
Query: 283 IHLHGLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVR 104
N+ S+ SD S LH LF K++++L G
Sbjct: 595 ------------------------NVVST---------SDECSWLHLLFAKLATKLGG-N 620
Query: 103 IQEFSDHLQLESFNVSICSNGNCPYKIKD 17
IQ+F HLQ++S ++S+C CPY+ D
Sbjct: 621 IQDFGQHLQVDSIHISVCLKDICPYRTTD 649
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/136 (39%), Positives = 84/136 (61%)
Frame = -1
Query: 463 SILDSQDINPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCP 284
S L S++ + Q+ +ERV+EG+L++EK+K+AK+V Q+ELL +IG +H VQFAYCCP
Sbjct: 1729 SNLVSKETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCP 1788
Query: 283 IHLHGLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVR 104
+ + LE K +D + N ++ SD S LH LF K++++L G
Sbjct: 1789 VQIGNLERTK--------------GMDFALSKN-VVSTSDECSWLHLLFAKLATKLGG-N 1832
Query: 103 IQEFSDHLQLESFNVS 56
IQ+F HLQ++S ++S
Sbjct: 1833 IQDFGQHLQVDSIHIS 1848
>ref|XP_004166505.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like, partial [Cucumis
sativus]
Length = 472
Score = 92.0 bits (227), Expect = 7e-17
Identities = 53/138 (38%), Positives = 77/138 (55%)
Frame = -1
Query: 430 PLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKP 251
P Q+ ++RV+EG+LVME K+ K + QDELL L+G +EH V+FA+C PI+ L+
Sbjct: 319 PALQVSDDRVNEGILVMENGKKXKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLD---- 374
Query: 250 HAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLE 71
+ ++DSL S L QL K+S+EL +Q ++LQ+E
Sbjct: 375 ---EIHVMDSL----------------SRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVE 415
Query: 70 SFNVSICSNGNCPYKIKD 17
S +SICS NCPY+ D
Sbjct: 416 SITLSICSKENCPYRTID 433
>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Cucumis sativus]
Length = 649
Score = 91.3 bits (225), Expect = 1e-16
Identities = 54/139 (38%), Positives = 79/139 (56%)
Frame = -1
Query: 433 LPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMK 254
+PLQ + ++RV+EG+LVME K+ K + QDELL L+G +EH V+FA+C PI+ L+
Sbjct: 496 IPLQ-VSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLD--- 551
Query: 253 PHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQL 74
+ ++DSL S L QL K+S+EL +Q ++LQ+
Sbjct: 552 ----EIHVMDSL----------------SRKSLWLSQLSFKLSTELSDRNVQNLGEYLQV 591
Query: 73 ESFNVSICSNGNCPYKIKD 17
ES +SICS NCPY+ D
Sbjct: 592 ESITLSICSKENCPYRTID 610
>gb|AAS80153.1| ACT11D09.9 [Cucumis melo]
Length = 708
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/135 (38%), Positives = 76/135 (56%)
Frame = -1
Query: 430 PLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKP 251
P Q+ ++RV+EG+LVME K+ K + QDELL L+G +EH V+FA+C PI+ L+
Sbjct: 555 PELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCRPIYFGSLD---- 610
Query: 250 HAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLE 71
+ ++DSL S L QL K+S+EL +Q ++LQ+E
Sbjct: 611 ---EIHVMDSL----------------SRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVE 651
Query: 70 SFNVSICSNGNCPYK 26
S +SICS NCPY+
Sbjct: 652 SITLSICSKENCPYR 666
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 82.0 bits (201), Expect = 8e-14
Identities = 46/133 (34%), Positives = 74/133 (55%)
Frame = -1
Query: 421 QIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKPHAP 242
Q+ ++RV+EG ++M+K + K+V Q+EL+ ++ + H VQ AYCCP+ + P +P
Sbjct: 494 QVCDDRVAEGAVIMQKDQHPKIVHQNELMDILEAENHKVQVAYCCPVCV----PDEP--- 546
Query: 241 SVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLESFN 62
+N+ + S + P D SLLH L+ K+S+ V I D LQ++SF
Sbjct: 547 ---------KNV-ALSPGEDMHPVLDKCSLLHLLYTKLSNGFQDVTILNDGDRLQIQSFT 596
Query: 61 VSICSNGNCPYKI 23
VS C CP++I
Sbjct: 597 VSPCLKEKCPHRI 609
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Frame = -1
Query: 463 SILDSQDI-----NPLPLQQIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQF 299
S+ D+ D+ N ++ +ERV+EG+LV+EK K+A++V QDELL ++G K+H VQF
Sbjct: 475 SLKDTSDLVLHSTNATSRLEVSDERVAEGILVVEKNKKARVVHQDELLLMLGAKQHEVQF 534
Query: 298 AYCCPIHLHGLEPMK--PHAPSVKLLDSLVENIDSSSENNALLPF 170
AYCCP+ + ++ + P + +LL E S+ + N LL F
Sbjct: 535 AYCCPVQVDNMDQTRRDPSSTHDELLTLENETGKSAIDLNLLLSF 579
>gb|EYU39703.1| hypothetical protein MIMGU_mgv1a002729mg [Mimulus guttatus]
Length = 643
Score = 69.3 bits (168), Expect = 5e-10
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Frame = -1
Query: 454 DSQDINPLPLQQIREERVSEGVLV-MEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIH 278
DS + +P Q+ E RV++G+L+ ++K + K+V ++EL+ IG + H +FAYCCPI+
Sbjct: 486 DSNNKRKMPQLQVCENRVAQGLLITLQKNQSRKVVTENELIDTIGTEIHEEKFAYCCPIY 545
Query: 277 LHGLEPMKPHAPSVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQ 98
P++ E+ D SS + L+ LF K+S E + IQ
Sbjct: 546 F-------PNS----------ESRDISS-----------FHLI--LFGKLSREFPDLNIQ 575
Query: 97 EFSDHLQLESFNVSICSNGNCPYK 26
+ D ++++SF S CS CPY+
Sbjct: 576 DCEDVIRIQSFVGSFCSKAKCPYR 599
>ref|XP_006290841.1| hypothetical protein CARUB_v10016952mg [Capsella rubella]
gi|482559548|gb|EOA23739.1| hypothetical protein
CARUB_v10016952mg [Capsella rubella]
Length = 555
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/132 (30%), Positives = 65/132 (49%)
Frame = -1
Query: 421 QIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKPHAP 242
++ ++R ++GVLV+EK+K+AK+V QDE+ ++ K H V AYCCP+ G
Sbjct: 420 RVTDQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKNHVVCLAYCCPVKAKG--------- 470
Query: 241 SVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLESFN 62
S+N+ L+ QL KIS + G +I E + LQ+ SF
Sbjct: 471 --------------ESDNDV--------DLIKQLSTKISEIMSGAQIHEAENSLQVGSFK 508
Query: 61 VSICSNGNCPYK 26
++C C ++
Sbjct: 509 GAVCLKEKCMHR 520
>ref|NP_178282.2| cleavage and polyadenylation specificity factor subunit 3-II
[Arabidopsis thaliana]
gi|332278175|sp|Q8GUU3.2|CPS3B_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 3-II; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit II; Short=AtCPSF73-II;
Short=CPSF 73 kDa subunit II; AltName: Full=Protein
EMBRYO SAC DEVELOPMENT ARREST 26
gi|62320470|dbj|BAD94982.1| putative cleavage and
polyadenylation specifity factor [Arabidopsis thaliana]
gi|330250395|gb|AEC05489.1| cleavage and polyadenylation
specificity factor subunit 3-II [Arabidopsis thaliana]
Length = 613
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/132 (30%), Positives = 65/132 (49%)
Frame = -1
Query: 421 QIREERVSEGVLVMEKTKRAKLVCQDELLPLIGVKEHTVQFAYCCPIHLHGLEPMKPHAP 242
++ + R ++GVLV+EK+K+AK+V QDE+ ++ K H V A+CCP+ + G
Sbjct: 478 RVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKG--------- 528
Query: 241 SVKLLDSLVENIDSSSENNALLPFSDNWSLLHQLFLKISSELDGVRIQEFSDHLQLESFN 62
SE+ D+ L+ QL KI + G +I E + LQ+ SF
Sbjct: 529 --------------ESED-------DDVDLIKQLSAKILKTVSGAQIHESENCLQVASFK 567
Query: 61 VSICSNGNCPYK 26
S+C C ++
Sbjct: 568 GSLCLKDKCMHR 579