BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00030394
         (627 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bu...   178   1e-42
gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red...   171   2e-40
ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot r...   167   2e-39
ref|NP_660172.1| hypothetical protein [Beet western yellows ST9 ...   163   4e-38
ref|NP_044732.1| replicase [Galinsoga mosaic virus] gi|2213432|e...   144   2e-32
ref|NP_054006.2| RNA-dependent RNA polymerase [Carrot mottle mim...   141   1e-31
gb|AAB81639.1| RNA-dependent RNA polymerase [Carrot mottle mimic...   141   1e-31
gb|ACJ03572.1| RNA-dependent RNA polymerase [Carrot mottle mimic...   141   1e-31
ref|NP_056825.2| RNA-dependent RNA polymerase [Tobacco necrosis ...   141   2e-31
ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle ...   140   2e-31
gb|ADE10194.1| RNA-dependent RNA polymerase [Tobacco necrosis vi...   138   1e-30
gb|ACJ03575.1| RNA-dependent RNA polymerase [Carrot mottle mimic...   138   1e-30
gb|AAT69238.1| RNA-dependent RNA polymerase [Tobacco necrosis vi...   138   2e-30
gb|AAZ43259.1| RNA dependent RNA polymerase [Olive latent virus 1]    137   2e-30
gb|AAZ43261.1| p52 [Olive latent virus 1]                             137   2e-30
gb|AEC50092.1| RNA-dependent RNA polymerase [Olive mild mosaic v...   137   3e-30
gb|AGG23390.1| RNA-dependent RNA polymerase [Citrus yellow vein-...   136   4e-30
ref|NP_733848.1| RNA-dependent RNA polymerase [Tobacco bushy top...   136   6e-30
emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top ...   136   6e-30
emb|CAR85733.1| RNA-dependent RNA polymerase [Tobacco bushy top ...   135   8e-30

>gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bushy top
            disease-associated RNA]
          Length = 788

 Score =  178 bits (451), Expect = 1e-42
 Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
 Frame = +3

Query: 3    LNYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLER 182
            LNY  RG MLL+ W  + NP  + LDASRFDLHVSV AL++T  +Y  +   +   LL +
Sbjct: 467  LNYLRRGEMLLKKWESFVNPVAICLDASRFDLHVSVEALQYTHILYYTAFGRDP--LLMQ 524

Query: 183  FMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRL-DVSV 359
             +  R +T G+A+C +G++RYKK+GGRCSGD DTSLGNV IML +TY LLE L    + V
Sbjct: 525  LLENRLETRGVAICKEGSYRYKKKGGRCSGDNDTSLGNVIIMLSITYHLLEGLPFPHIEV 584

Query: 360  VNDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVR-DQSG 536
             ND DDQ+ I E E    +   +E  F   GF L  E  VY+   I+FCQT+PVR     
Sbjct: 585  ANDXDDQVLIVEKENELALLEAVEPCFAKFGFRLTVEQPVYEFERIDFCQTRPVRLSPDV 644

Query: 537  WIMVRKPQNSITRDLATFIDVRQPTVRANM 626
              MVR P+ ++T+DL +FI + +  ++ +M
Sbjct: 645  TTMVRHPRLAMTKDLTSFIPIERGLMKYHM 674


>gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red leaf luteovirus
            associated RNA]
          Length = 757

 Score =  171 bits (432), Expect = 2e-40
 Identities = 87/203 (42%), Positives = 125/203 (61%), Gaps = 2/203 (0%)
 Frame = +3

Query: 3    LNYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLER 182
            +NYR R   LLE W  + +P  + LDASRFDLHVSV ALKFTD+IY  +        L+ 
Sbjct: 435  MNYRTRARALLEKWQSFDSPVAVCLDASRFDLHVSVDALKFTDQIYLSAFTGIDRSELKE 494

Query: 183  FMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLR-LDVSV 359
             +R RH T G A C +G   Y+K GGRCSGD DTSLGNV+IML +T  + E L+ + + V
Sbjct: 495  ILRNRHKTTGFATCKEGTFHYEKVGGRCSGDSDTSLGNVSIMLAITRVICEELKGIHIEV 554

Query: 360  VNDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGW 539
             NDGDDQ+ + E   ++ +   +   F   GF +  E  V++   I+FCQT+P+    G 
Sbjct: 555  ANDGDDQVLMVETNQLDNLIKELSPTFARFGFRVKVEDPVWEFERIDFCQTRPIFLSPGE 614

Query: 540  -IMVRKPQNSITRDLATFIDVRQ 605
             +M R P  S+++D+A+F+++ +
Sbjct: 615  PLMCRYPMQSMSKDVASFLNIER 637


>ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot red leaf luteovirus
            associated RNA] gi|2582376|gb|AAB82546.1| putative RNA
            dependent RNA polymerase [carrot red leaf luteovirus
            associated RNA]
          Length = 757

 Score =  167 bits (424), Expect = 2e-39
 Identities = 87/203 (42%), Positives = 124/203 (61%), Gaps = 2/203 (0%)
 Frame = +3

Query: 3    LNYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLER 182
            +NYR R   LLE W  + +P  + LDASRFDLHVSV ALKFTD+IY  +        L+ 
Sbjct: 435  MNYRTRARALLEKWQSFDSPVAVCLDASRFDLHVSVDALKFTDQIYLSAFTGIDRSELKE 494

Query: 183  FMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLR-LDVSV 359
             +R RH T G A   +G   Y+K GGRCSGD DTSLGNV+IML +T  + E L+ + + V
Sbjct: 495  ILRNRHKTTGFATFKEGTFHYEKVGGRCSGDSDTSLGNVSIMLAITRVICEGLKGIHIEV 554

Query: 360  VNDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGW 539
             NDGDDQ+ + E   ++ +   +   F   GF +  E  V++   I+FCQT+P+    G 
Sbjct: 555  ANDGDDQVLMVETNQLDNLVKELSPTFARFGFRVKVEDPVWEFERIDFCQTRPIFLSPGE 614

Query: 540  -IMVRKPQNSITRDLATFIDVRQ 605
             IM R P  S+++D+A+F+++ +
Sbjct: 615  PIMCRYPMQSMSKDVASFLNIER 637


>ref|NP_660172.1| hypothetical protein [Beet western yellows ST9 associated virus]
           gi|289512|gb|AAA42863.1| 5' end of ORF 3 is
           undetermined; putative [Beet western yellows ST9
           associated virus]
          Length = 342

 Score =  163 bits (412), Expect = 4e-38
 Identities = 93/212 (43%), Positives = 131/212 (61%), Gaps = 4/212 (1%)
 Frame = +3

Query: 3   LNYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLL--PESSVLL 176
           LNY  RG+ + E W  +++P  + LDASRFDLHVS  AL+ T  +Y  ++   P+ + +L
Sbjct: 21  LNYLRRGNYMKEKWESFNDPVAICLDASRFDLHVSEDALQHTHLLYTTAIGNDPQLAYIL 80

Query: 177 ERFMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRL-DV 353
           E     R  T G+   SDGA RY K+GGRCSGD DTSLGNV IML +TY   E   +  +
Sbjct: 81  EN----RLVTDGVGWSSDGAFRYHKKGGRCSGDNDTSLGNVIIMLSITYAFCEESEIPHI 136

Query: 354 SVVNDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVR-DQ 530
            + NDGDDQ+ + E E ++T+   IE  FR  GF+L  E  VY+   I+FCQT+PV+   
Sbjct: 137 EITNDGDDQVIMVEREHMHTV-LQIEDTFRKFGFLLKVEDPVYELERIDFCQTRPVQLTP 195

Query: 531 SGWIMVRKPQNSITRDLATFIDVRQPTVRANM 626
               MVR P+ ++T+DL TFI + +  ++ +M
Sbjct: 196 DVCTMVRHPRLAMTKDLTTFIPIERGRLKYHM 227


>ref|NP_044732.1| replicase [Galinsoga mosaic virus] gi|2213432|emb|CAA73863.1|
           replicase [Galinsoga mosaic virus]
          Length = 729

 Score =  144 bits (364), Expect = 2e-32
 Identities = 77/196 (39%), Positives = 116/196 (59%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           E+ S+  E W+ +S P  + LDASRFD HVSV ALK+  ++Y  +   + +  L++ ++ 
Sbjct: 414 EQASIAREKWDRFSKPVAIGLDASRFDQHVSVAALKWEHKLYHHAFNHDKT--LKKLLKW 471

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  IM G+ Y LL +  +D  ++N+GD
Sbjct: 472 QIHNEGTAFASDGCIKYKKTGCRMSGDMNTSLGNCLIMCGMVYDLLVTHDIDAELLNNGD 531

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + I E      +   I Q+FR  GF +  E  V+    +EFCQT+PV     WIMVRK
Sbjct: 532 DCVLICERSEEAHLLEVIPQYFRQYGFTMEVEKPVHIFEKLEFCQTQPVYVDGKWIMVRK 591

Query: 555 PQNSITRDLATFIDVR 602
           P  ++++DL   + ++
Sbjct: 592 PNPAMSKDLTCLLPIQ 607


>ref|NP_054006.2| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
          Length = 882

 Score =  141 bits (356), Expect = 1e-31
 Identities = 79/200 (39%), Positives = 115/200 (57%)
 Frame = +3

Query: 6    NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
            N  + G ++ + W+ + NP C+ LDASRFD HVSV ALKFT  +Y+R     SS      
Sbjct: 541  NAFQTGEIIRKKWDSFRNPVCVGLDASRFDQHVSVEALKFTHSVYKRF---NSSKEFVDL 597

Query: 186  MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
            + + +   GL  C DG  +YK +G R SGD+DT+LGN  +M+ +T  L   L +   +++
Sbjct: 598  LNQMYVNRGLGTCKDGLVKYKVKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMD 657

Query: 366  DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
            +GDD + I E E +    A ++ +F   GF +  E  VY    +EFCQT+PV D + W M
Sbjct: 658  NGDDCIVIFEKEHLQRFNAAVKPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRM 717

Query: 546  VRKPQNSITRDLATFIDVRQ 605
            VR+   SI +DL + ID  Q
Sbjct: 718  VRQIP-SIAKDLCSVIDWEQ 736


>gb|AAB81639.1| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
          Length = 569

 Score =  141 bits (356), Expect = 1e-31
 Identities = 79/200 (39%), Positives = 115/200 (57%)
 Frame = +3

Query: 6   NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
           N  + G ++ + W+ + NP C+ LDASRFD HVSV ALKFT  +Y+R     SS      
Sbjct: 228 NAFQTGEIIRKKWDSFRNPVCVGLDASRFDQHVSVEALKFTHSVYKRF---NSSKEFVDL 284

Query: 186 MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
           + + +   GL  C DG  +YK +G R SGD+DT+LGN  +M+ +T  L   L +   +++
Sbjct: 285 LNQMYVNRGLGTCKDGLVKYKVKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMD 344

Query: 366 DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
           +GDD + I E E +    A ++ +F   GF +  E  VY    +EFCQT+PV D + W M
Sbjct: 345 NGDDCIVIFEKEHLQRFNAAVKPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRM 404

Query: 546 VRKPQNSITRDLATFIDVRQ 605
           VR+   SI +DL + ID  Q
Sbjct: 405 VRQIP-SIAKDLCSVIDWEQ 423


>gb|ACJ03572.1| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
          Length = 882

 Score =  141 bits (356), Expect = 1e-31
 Identities = 79/200 (39%), Positives = 115/200 (57%)
 Frame = +3

Query: 6    NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
            N  + G ++ + W+ + NP C+ LDASRFD HVSV ALKFT  +Y+R     SS      
Sbjct: 541  NAFQTGEIIRKKWDSFRNPVCVGLDASRFDQHVSVEALKFTHSVYKRF---NSSKEFVDL 597

Query: 186  MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
            + + +   GL  C DG  +YK +G R SGD+DT+LGN  +M+ +T  L   L +   +++
Sbjct: 598  LNQMYVNRGLGTCKDGLVKYKVKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMD 657

Query: 366  DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
            +GDD + I E E +    A ++ +F   GF +  E  VY    +EFCQT+PV D + W M
Sbjct: 658  NGDDCIVIFEKEHLQRFNAAVKPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRM 717

Query: 546  VRKPQNSITRDLATFIDVRQ 605
            VR+   SI +DL + ID  Q
Sbjct: 718  VRQIP-SIAKDLCSVIDWEQ 736


>ref|NP_056825.2| RNA-dependent RNA polymerase [Tobacco necrosis virus A]
           gi|308153486|sp|P22958.2|RDRP_TNVA RecName:
           Full=RNA-directed RNA polymerase; AltName: Full=Protein
           p82; Contains: RecName: Full=Protein p23
           gi|19549335|gb|AAA86434.2| RNA-dependent RNA polymerase
           [Tobacco necrosis virus A]
          Length = 724

 Score =  141 bits (355), Expect = 2e-31
 Identities = 77/193 (39%), Positives = 115/193 (59%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   WN Y NP  + LDASRFD HVSV AL++  E Y R    +    L+  +++
Sbjct: 409 QQGEIMRSKWNKYVNPVAVGLDASRFDQHVSVEALEYEHEFYLRDYPNDKQ--LKWLLKQ 466

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK+G R SGD++TSLGN  +M  + Y L E L +++S+ N+GD
Sbjct: 467 QLCNVGTAFASDGIIKYKKKGCRMSGDMNTSLGNCILMCAMVYGLKEHLNINLSLANNGD 526

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   +  + + IE +F+  GF +  E  V     IEFCQT+PV D S +IMVRK
Sbjct: 527 DCVIVCEKADLKKLTSSIEPYFKQFGFKMEVEKPVDIFERIEFCQTQPVFDGSQYIMVRK 586

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 587 PSVVTSKDVTSLI 599


>ref|YP_002302259.1| RNA-dependent RNA polymerase [Carrot mottle virus]
            gi|209972132|gb|ACJ03580.1| RNA-dependent RNA polymerase
            [Carrot mottle virus]
          Length = 870

 Score =  140 bits (354), Expect = 2e-31
 Identities = 76/201 (37%), Positives = 120/201 (59%), Gaps = 1/201 (0%)
 Frame = +3

Query: 6    NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLL-PESSVLLER 182
            N  + G ++ + W  + +P C+ LDASRFD HVSV ALKFT ++Y+R +  PE     +R
Sbjct: 522  NAFQTGDIIAKKWRSFRDPVCVGLDASRFDQHVSVAALKFTHKVYKRFVRDPE----FDR 577

Query: 183  FMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVV 362
             ++  +   G     DG  +YK +G R SGD+DT+LGN  +M+ +T +L + L +   ++
Sbjct: 578  LLQLMYTNKGRGTAKDGVVKYKVKGCRMSGDMDTALGNCVLMVPMTRELCKRLEIPHELM 637

Query: 363  NDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWI 542
            ++GDD + I + E ++     ++ +F+D GF +  E  V+    IEFCQT+PV D + W 
Sbjct: 638  DNGDDCIVIFDKEHLSKFQRAVKPYFKDLGFSMKVEAPVFKLEQIEFCQTQPVFDGTQWR 697

Query: 543  MVRKPQNSITRDLATFIDVRQ 605
            MVR+  NSI +DL + I   Q
Sbjct: 698  MVRQ-VNSIAKDLCSVISWEQ 717


>gb|ADE10194.1| RNA-dependent RNA polymerase [Tobacco necrosis virus A]
          Length = 724

 Score =  138 bits (348), Expect = 1e-30
 Identities = 77/193 (39%), Positives = 113/193 (58%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   WN Y NP  + LDASRFD HVSV ALK+  E Y R    +    L+  +++
Sbjct: 409 QQGEIMRSKWNKYVNPVAVGLDASRFDQHVSVEALKYEHEFYLRDYPNDKQ--LKWLLKQ 466

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  +M  + Y L E L + +S+ N+GD
Sbjct: 467 QLCNVGTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVYGLKEHLGIQLSLANNGD 526

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   +  + + IE +F+  GF +  E  V     IEFCQT+PV D + +IMVRK
Sbjct: 527 DCVIVCEKADLIKLTSSIEPYFKQFGFKMEVEKPVDIFERIEFCQTQPVFDGNQYIMVRK 586

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 587 PSVVTSKDVTSLI 599


>gb|ACJ03575.1| RNA-dependent RNA polymerase [Carrot mottle mimic virus]
          Length = 880

 Score =  138 bits (348), Expect = 1e-30
 Identities = 77/200 (38%), Positives = 115/200 (57%)
 Frame = +3

Query: 6    NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
            N  + G ++ + W+ + NP C+ LDASRFD HVSV ALKFT  +Y+R     SS      
Sbjct: 541  NAFQTGEIIRKKWDSFRNPVCVGLDASRFDQHVSVEALKFTHSVYKRF---NSSKEFVEL 597

Query: 186  MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
            + + +   GL  C DG  +YK +G R SGD+DT+LGN  +M+ +T  L   L +   +++
Sbjct: 598  LDQMYVNRGLGTCKDGLVKYKVKGCRMSGDMDTALGNCVLMVLMTRNLCLDLSIPHELMD 657

Query: 366  DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
            +GDD + + E E +    A ++ +F   GF +  E  VY    +EFCQT+PV D + W M
Sbjct: 658  NGDDCIVMFEKEHLQKFNAAVKPYFAALGFTMKVEAPVYQFEKVEFCQTQPVFDGTQWRM 717

Query: 546  VRKPQNSITRDLATFIDVRQ 605
            VR+   SI +DL + I+  Q
Sbjct: 718  VRQIP-SIAKDLCSVINWEQ 736


>gb|AAT69238.1| RNA-dependent RNA polymerase [Tobacco necrosis virus A]
          Length = 724

 Score =  138 bits (347), Expect = 2e-30
 Identities = 76/193 (39%), Positives = 114/193 (59%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   WN Y NP  + LDASRFD HVSV AL++  E Y R    +    L+  +++
Sbjct: 409 QQGEIMRSKWNKYVNPVAVGLDASRFDQHVSVEALEYEHEFYLRDYPNDKQ--LKWLLKQ 466

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  +M  + Y L E L + +S+ N+GD
Sbjct: 467 QLCNIGTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVYGLKEHLGIKLSLANNGD 526

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   ++ + + IE +F+  GF +  E  V     IEFCQT+PV D + +IMVRK
Sbjct: 527 DCVIVCEKADLSKLTSSIEPYFKQFGFKMEVEKPVDIFERIEFCQTQPVFDGNQYIMVRK 586

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 587 PSVVTSKDVTSLI 599


>gb|AAZ43259.1| RNA dependent RNA polymerase [Olive latent virus 1]
          Length = 724

 Score =  137 bits (346), Expect = 2e-30
 Identities = 76/193 (39%), Positives = 112/193 (58%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   W  Y NP  + LDASRFD HVSV AL++  E Y R    +    L+  +++
Sbjct: 409 QQGEIMFSKWKKYVNPVAVGLDASRFDQHVSVEALQYEHEFYIRDYPNDKQ--LKWLLKQ 466

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  +M  + Y L E L +++S+ N+GD
Sbjct: 467 QLSNIGTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVYGLKEHLGINLSLANNGD 526

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   +  + + IE +FR  GF +  E  V     IEFCQT+PV D   +IMVRK
Sbjct: 527 DCVIVCEKADLKKLTSSIEPYFRQFGFKMEVEQPVDIFERIEFCQTQPVFDGYQYIMVRK 586

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 587 PSVVTSKDVTSLI 599


>gb|AAZ43261.1| p52 [Olive latent virus 1]
          Length = 460

 Score =  137 bits (346), Expect = 2e-30
 Identities = 76/193 (39%), Positives = 112/193 (58%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   W  Y NP  + LDASRFD HVSV AL++  E Y R    +    L+  +++
Sbjct: 145 QQGEIMFSKWKKYVNPVAVGLDASRFDQHVSVEALQYEHEFYIRDYPNDKQ--LKWLLKQ 202

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  +M  + Y L E L +++S+ N+GD
Sbjct: 203 QLSNIGTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVYGLKEHLGINLSLANNGD 262

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   +  + + IE +FR  GF +  E  V     IEFCQT+PV D   +IMVRK
Sbjct: 263 DCVIVCEKADLKKLTSSIEPYFRQFGFKMEVEQPVDIFERIEFCQTQPVFDGYQYIMVRK 322

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 323 PSVVTSKDVTSLI 335


>gb|AEC50092.1| RNA-dependent RNA polymerase [Olive mild mosaic virus]
          Length = 724

 Score =  137 bits (344), Expect = 3e-30
 Identities = 76/193 (39%), Positives = 113/193 (58%)
 Frame = +3

Query: 15  ERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERFMRE 194
           ++G ++   W  Y NP  + LDASRFD HVS  AL++  E Y R  L +    L+  +++
Sbjct: 409 QQGEIMHSKWKKYVNPVAVGLDASRFDQHVSREALEYEHEFYLRDYLNDKQ--LKWLLKQ 466

Query: 195 RHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVNDGD 374
           +    G A  SDG  +YKK G R SGD++TSLGN  +M  + + L E L +++S+ N+GD
Sbjct: 467 QLSNVGTAFASDGIIKYKKEGCRMSGDMNTSLGNCILMCAMVFGLKEHLGMELSLANNGD 526

Query: 375 DQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIMVRK 554
           D + + E   +  + + IE +FR  GF +  E  V     IEFCQT+PV D S +IMVRK
Sbjct: 527 DCVIVCEKADLLKLTSSIEPYFRQFGFKMEVEKPVDIFERIEFCQTQPVFDGSQYIMVRK 586

Query: 555 PQNSITRDLATFI 593
           P    ++D+ + I
Sbjct: 587 PSVVTSKDVTSLI 599


>gb|AGG23390.1| RNA-dependent RNA polymerase [Citrus yellow vein-associated virus]
          Length = 717

 Score =  136 bits (343), Expect = 4e-30
 Identities = 80/193 (41%), Positives = 114/193 (59%)
 Frame = +3

Query: 3   LNYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLER 182
           LN  E G+ L   W  +S+P C+ LDASRFDLHVSVG LKFT ++Y        S  L+R
Sbjct: 392 LNALESGATLRRKWEKFSSPVCVSLDASRFDLHVSVGMLKFTHKLYDYYC---KSPTLQR 448

Query: 183 FMRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVV 362
           +++     HG+A C + ++ Y+  G R SGD+DT+LGN  IM  +T+ +L  L +   + 
Sbjct: 449 YLKWTLRNHGVASCKELSYEYEVVGRRMSGDMDTALGNCVIMSILTWFMLSELGIKHELF 508

Query: 363 NDGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWI 542
           ++GDD LFI E+  V +    I   F D GF++  E V      IEFCQT PV  + GW+
Sbjct: 509 DNGDDCLFICESHDVPSPEV-ITNWFSDFGFVVRLEGVTSVFERIEFCQTSPVWTERGWL 567

Query: 543 MVRKPQNSITRDL 581
           M R  + S+++DL
Sbjct: 568 MCRNIK-SLSKDL 579


>ref|NP_733848.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
           gi|24528570|gb|AAN62863.1| RNA-dependent RNA polymerase
           [Tobacco bushy top virus]
          Length = 557

 Score =  136 bits (342), Expect = 6e-30
 Identities = 73/200 (36%), Positives = 115/200 (57%)
 Frame = +3

Query: 6   NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
           N  E G ++ + W  +S+P C+ LDASRFD HVS  AL+FT  +Y+R +       + + 
Sbjct: 206 NAVETGEIVAKKWKCFSDPVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGRE---VNKL 262

Query: 186 MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
           +   +  H L    DG  +Y+  G R SGD+DT+LGN  +M+ +T +L ++L +   ++N
Sbjct: 263 LSWMYKNHALGSAKDGFVKYEVEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMN 322

Query: 366 DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
           +GDD + I + + ++T    +E  FR+ GF +  E  VY    ++FCQT+PV D   W M
Sbjct: 323 NGDDCIVIFDRQYLSTFQDAVEPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRM 382

Query: 546 VRKPQNSITRDLATFIDVRQ 605
           VR   +SI +D  + ID  Q
Sbjct: 383 VRH-ISSIAKDCCSVIDWEQ 401


>emb|CAX62133.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 557

 Score =  136 bits (342), Expect = 6e-30
 Identities = 73/200 (36%), Positives = 115/200 (57%)
 Frame = +3

Query: 6   NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
           N  E G ++ + W  +S+P C+ LDASRFD HVS  AL+FT  +Y+R +       + + 
Sbjct: 206 NAVETGEIVAKKWKCFSDPVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGRE---VNKL 262

Query: 186 MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
           +   +  H L    DG  +Y+  G R SGD+DT+LGN  +M+ +T +L ++L +   ++N
Sbjct: 263 LSWMYKNHALGSAKDGFVKYEVEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMN 322

Query: 366 DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
           +GDD + I + + ++T    +E  FR+ GF +  E  VY    ++FCQT+PV D   W M
Sbjct: 323 NGDDCIVIFDRQYLSTFQDAVEPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRM 382

Query: 546 VRKPQNSITRDLATFIDVRQ 605
           VR   +SI +D  + ID  Q
Sbjct: 383 VRH-ISSIAKDCCSVIDWEQ 401


>emb|CAR85733.1| RNA-dependent RNA polymerase [Tobacco bushy top virus]
          Length = 557

 Score =  135 bits (341), Expect = 8e-30
 Identities = 73/200 (36%), Positives = 115/200 (57%)
 Frame = +3

Query: 6   NYRERGSMLLETWNLYSNPACLMLDASRFDLHVSVGALKFTDEIYRRSLLPESSVLLERF 185
           N  E G ++ + W  +S+P C+ LDASRFD HVS  AL+FT  +Y+R +       + + 
Sbjct: 206 NAVETGEIVAKKWKCFSDPVCVGLDASRFDQHVSCDALQFTHSVYKRFVKGRE---VNKL 262

Query: 186 MRERHDTHGLAVCSDGAHRYKKRGGRCSGDVDTSLGNVAIMLGVTYKLLESLRLDVSVVN 365
           +   +  H L    DG  +Y+  G R SGD+DT+LGN  +M+ +T +L ++L +   ++N
Sbjct: 263 LSWMYKNHALGSAKDGFVKYEVEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMN 322

Query: 366 DGDDQLFIGEAETVNTIAAHIEQHFRDAGFILACEPVVYDPSDIEFCQTKPVRDQSGWIM 545
           +GDD + I + + ++T    +E  FR+ GF +  E  VY    ++FCQT+PV D   W M
Sbjct: 323 NGDDCIVIFDRQYLSTFQDAVEPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRM 382

Query: 546 VRKPQNSITRDLATFIDVRQ 605
           VR   +SI +D  + ID  Q
Sbjct: 383 VRH-ISSIAKDCCSVIDWEQ 401