BLASTX nr result

ID: Akebia23_contig00030054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00030054
         (226 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                60   4e-07
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    59   9e-07
gb|EMS58462.1| hypothetical protein TRIUR3_26054 [Triticum urartu]     56   6e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = +1

Query: 13  YNGLGTKD---DV*KLSGIRGRKTKDLDNVRCIKGEDEMVMSRDEEIKKRCRGYF*KLLN 183
           Y  L TK+   D+ KL+  R +KT+DL+ VRCIK ED  V++ +  +K R RGYF  L N
Sbjct: 474 YKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFN 533

Query: 184 DDHQR 198
           + H+R
Sbjct: 534 EGHER 538


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = +1

Query: 13  YNGLGTKD---DV*KLSGIRGRKTKDLDNVRCIKGEDEMVMSRDEEIKKRCRGYF*KLLN 183
           Y  L TK+   D+ KL+  R +KT+DL+ VRCIK ED  V++ +  +K + RGYF  L N
Sbjct: 78  YKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNLFN 137

Query: 184 DDHQR 198
           + H+R
Sbjct: 138 EGHER 142


>gb|EMS58462.1| hypothetical protein TRIUR3_26054 [Triticum urartu]
          Length = 1206

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
 Frame = +1

Query: 13  YNGLGTKD---DV*KLSGIRGRKTKDLDNVRCIKGEDEMVMSRDEEIKKRCRGYF*KLLN 183
           Y  LGTK+   D+ K++ IR RKT+D+  V+CIK     ++ +DEEIK R R YF KL N
Sbjct: 92  YQRLGTKEGERDIYKMAKIRERKTRDIGQVKCIKDGAGQLLVKDEEIKHRWREYFDKLFN 151

Query: 184 DDHQ 195
            +++
Sbjct: 152 GENE 155


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