BLASTX nr result

ID: Akebia23_contig00029343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00029343
         (788 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007213285.1| hypothetical protein PRUPE_ppa000031mg [Prun...    59   3e-06
ref|XP_007041050.1| Chromatin remodeling complex subunit [Theobr...    58   4e-06
ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    58   4e-06

>ref|XP_007213285.1| hypothetical protein PRUPE_ppa000031mg [Prunus persica]
            gi|462409150|gb|EMJ14484.1| hypothetical protein
            PRUPE_ppa000031mg [Prunus persica]
          Length = 2327

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 39/108 (36%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
 Frame = -1

Query: 788  ASCVGPGP------SFLGSELPPPKPLEP--IGQGGSFESKDLRGKQKAGQSPVLGKWGQ 633
            ASCV PGP          S     KP  P  + Q G  +S+   G ++A +   L     
Sbjct: 2220 ASCVAPGPHLSAASGMASSSFHDTKPSLPNSVDQVGLLDSQTAFGSKEAKRGSPLKVCDS 2279

Query: 632  LSDERTARTESGDSSKTHSDPRQIDRPXXXXXXXXETVSDSHGCEQDP 489
            L  +RT  TESGDSSKT SDP + +RP         TVSD    +++P
Sbjct: 2280 LGKDRTCDTESGDSSKTQSDPSRTERPDVEEISSEGTVSDHPLSDREP 2327


>ref|XP_007041050.1| Chromatin remodeling complex subunit [Theobroma cacao]
            gi|508704985|gb|EOX96881.1| Chromatin remodeling complex
            subunit [Theobroma cacao]
          Length = 2342

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
 Frame = -1

Query: 788  ASCVGPGP-----------SFLGSELPPPKPLEPIGQGGSFESKDLRGKQKAGQSPVLGK 642
            ASCV PGP           S L S+LP PK +  +G     +S+ +  K+ A QS  +  
Sbjct: 2235 ASCVAPGPHMSSSSAMTNSSLLDSKLPLPKSVNEVGYP---DSQGVSDKRMAKQSSPIDV 2291

Query: 641  WGQLSDERTARTESGDSSKTHSDPRQIDRPXXXXXXXXETVSDSHGCEQDP 489
              Q  +ER    +SGDSSKT SDP + ++P         TVSD    + +P
Sbjct: 2292 QDQPPEERRDEHDSGDSSKTQSDPSRPEQPDVEEISSEGTVSDHPVSDHEP 2342


>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
 Frame = -1

Query: 788  ASCVGPGP-----------SFLGSELPPPKPLEPIGQGGSFESKDLRGKQKAGQSPVLGK 642
            ASCV PGP            FL S+LP PK ++   +G   +S    G QK  Q+  L  
Sbjct: 2245 ASCVAPGPHIPPVPGMPSSGFLDSKLPLPKFID---RGEFPDSTGASGNQKGKQTSTLSV 2301

Query: 641  WGQLSDERTARTESGD-SSKTHSDPRQIDRPXXXXXXXXETVSDSHGCEQDP 489
               L+ ER  + ESGD SSKT SDP   + P         TVSD    + +P
Sbjct: 2302 HAPLNQERREQIESGDSSSKTQSDPSHAEHPNVEEISSEGTVSDHRVSDHEP 2353


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