BLASTX nr result

ID: Akebia23_contig00029138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00029138
         (274 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297966.1| hypothetical protein POPTR_0001s10920g [Popu...    58   2e-06
gb|EXC14470.1| RING-H2 zinc finger protein RHA4a [Morus notabilis]     57   2e-06
ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    57   3e-06

>ref|XP_002297966.1| hypothetical protein POPTR_0001s10920g [Populus trichocarpa]
           gi|222845224|gb|EEE82771.1| hypothetical protein
           POPTR_0001s10920g [Populus trichocarpa]
          Length = 310

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/53 (52%), Positives = 34/53 (64%)
 Frame = -3

Query: 161 MGVPQTSSPPHLYSQQIQLKLYQAFIFSVPXXXXXXXXXXXXXXXLKRRDSNL 3
           MG+PQ  +PPHLY QQ+QLKLYQAFIFS+P               LKRR S++
Sbjct: 1   MGIPQAPAPPHLYPQQLQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSI 53


>gb|EXC14470.1| RING-H2 zinc finger protein RHA4a [Morus notabilis]
          Length = 218

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/52 (55%), Positives = 33/52 (63%)
 Frame = -3

Query: 161 MGVPQTSSPPHLYSQQIQLKLYQAFIFSVPXXXXXXXXXXXXXXXLKRRDSN 6
           MGVPQ+ +PPHLY Q +QLKLYQAFIFS+P               LKRR SN
Sbjct: 1   MGVPQSPTPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASN 52


>ref|XP_004143861.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Cucumis sativus]
           gi|449532338|ref|XP_004173139.1| PREDICTED: RING-H2 zinc
           finger protein RHA4a-like [Cucumis sativus]
          Length = 196

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 34/53 (64%)
 Frame = -3

Query: 161 MGVPQTSSPPHLYSQQIQLKLYQAFIFSVPXXXXXXXXXXXXXXXLKRRDSNL 3
           MG+PQ+ SPPHLY Q +QLKLYQAFIFS+P               LKRR S+L
Sbjct: 1   MGLPQSPSPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSL 53


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