BLASTX nr result
ID: Akebia23_contig00028958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00028958
(342 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 3e-12
ref|XP_006842191.1| hypothetical protein AMTR_s00078p00161460 [A... 66 4e-09
gb|EXB37790.1| DEAD-box ATP-dependent RNA helicase 39 [Morus not... 65 1e-08
ref|XP_004290472.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 62 6e-08
ref|XP_004252562.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 62 8e-08
ref|XP_002527090.1| dead box ATP-dependent RNA helicase, putativ... 62 1e-07
ref|XP_007019655.1| DEAD-box ATP-dependent RNA helicase 39 isofo... 60 4e-07
ref|XP_006397149.1| hypothetical protein EUTSA_v10028511mg [Eutr... 59 7e-07
ref|XP_002307523.2| hypothetical protein POPTR_0005s22020g [Popu... 59 7e-07
ref|XP_006383646.1| hypothetical protein POPTR_0005s22020g [Popu... 59 7e-07
gb|EYU36549.1| hypothetical protein MIMGU_mgv1a002525mg [Mimulus... 57 3e-06
ref|XP_006286471.1| hypothetical protein CARUB_v10000464mg [Caps... 56 5e-06
dbj|BAD43116.1| unnamed protein product [Arabidopsis thaliana] 56 6e-06
emb|CAB39640.1| putative protein [Arabidopsis thaliana] gi|72676... 56 6e-06
ref|NP_849348.1| DEAD-box ATP-dependent RNA helicase 39 [Arabido... 56 6e-06
ref|XP_004489911.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 55 8e-06
>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
Length = 635
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/74 (52%), Positives = 53/74 (71%), Gaps = 4/74 (5%)
Frame = -2
Query: 263 YPFLTTSPSRVFLRFRPLC----STTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKTQQ 96
Y + +RVFL F+P+ S+TTA+E D +L+PMRHSILLE+LR RHLKDS+K+ Q
Sbjct: 32 YKLAIPTTTRVFLGFKPISCSSSSSTTAIEADQALQPMRHSILLEKLRFRHLKDSAKSPQ 91
Query: 95 TRTPSVRSVEKEQE 54
TR+P + + KE E
Sbjct: 92 TRSPPLSTGGKEGE 105
>ref|XP_006842191.1| hypothetical protein AMTR_s00078p00161460 [Amborella trichopoda]
gi|548844240|gb|ERN03866.1| hypothetical protein
AMTR_s00078p00161460 [Amborella trichopoda]
Length = 587
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = -2
Query: 245 SPSRVFLRFRPLCSTTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKTQQTRTPSV 78
S +RVF+ F+PLC TT+ E ++ RHSILLERLRIRHLK S K QQ + PS+
Sbjct: 30 SKTRVFVGFKPLCFTTSTAEPVQQIQADRHSILLERLRIRHLKGSGKKQQDKNPSL 85
>gb|EXB37790.1| DEAD-box ATP-dependent RNA helicase 39 [Morus notabilis]
Length = 636
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/70 (45%), Positives = 51/70 (72%), Gaps = 5/70 (7%)
Frame = -2
Query: 242 PSRVFLRFRPLCSTTTA-----VEQDNSLEPMRHSILLERLRIRHLKDSSKTQQTRTPSV 78
P+R++ FRPL ++ T V+ D++++P++HSILLERLR+RHLKDS+K Q+T+T
Sbjct: 42 PTRIYPGFRPLRTSATTTETETVDTDDTIQPLKHSILLERLRLRHLKDSAKPQETKT--- 98
Query: 77 RSVEKEQEED 48
S +K +E+
Sbjct: 99 -STKKNSDEN 107
>ref|XP_004290472.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Fragaria
vesca subsp. vesca]
Length = 606
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Frame = -2
Query: 257 FLTTSPSRVFLRFRPLCSTTTA----VEQDNSLEPMRHSILLERLRIRHLKDSSKTQQT- 93
F P+RV FRPLC+TT VE + L+P++HS+LLERLR+RHLK SS Q
Sbjct: 30 FSLPKPTRVLTGFRPLCTTTITPAVQVEDQDVLQPLKHSVLLERLRLRHLKSSSAKPQNN 89
Query: 92 ----RTPSVRSVEKEQEE 51
R RSV K++ E
Sbjct: 90 PNGERQSEDRSVRKKKVE 107
>ref|XP_004252562.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Solanum
lycopersicum]
Length = 636
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 7/62 (11%)
Frame = -2
Query: 269 TRYPFLTTSPSRVFLRFRPLCSTTTAV-------EQDNSLEPMRHSILLERLRIRHLKDS 111
TR P L P RV+L FRPL STTT E++++L+P++HSILLERLR+RHL++S
Sbjct: 21 TRNPLLP-QPRRVYLGFRPLSSTTTTAPSYAAVAEEEDALQPVKHSILLERLRLRHLRES 79
Query: 110 SK 105
K
Sbjct: 80 PK 81
>ref|XP_002527090.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533513|gb|EEF35253.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 601
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/88 (47%), Positives = 54/88 (61%), Gaps = 17/88 (19%)
Frame = -2
Query: 263 YPFLT-TSPSRVFL--RFRPLCSTT---TAVEQDNSL-----EPMRHSILLERLRIRHLK 117
YPFL PSRV L F+PLC+TT T E + + +HSILLERLR+RHLK
Sbjct: 21 YPFLRFPKPSRVLLGFNFKPLCTTTASATVTETSTTTTFSDPDQAKHSILLERLRLRHLK 80
Query: 116 DSSKTQ------QTRTPSVRSVEKEQEE 51
+SSKTQ QT+T V +VE E+++
Sbjct: 81 NSSKTQQLKTQTQTQTKLVVNVETEKDD 108
>ref|XP_007019655.1| DEAD-box ATP-dependent RNA helicase 39 isoform 1 [Theobroma cacao]
gi|590601750|ref|XP_007019656.1| DEAD-box ATP-dependent
RNA helicase 39 isoform 1 [Theobroma cacao]
gi|508724983|gb|EOY16880.1| DEAD-box ATP-dependent RNA
helicase 39 isoform 1 [Theobroma cacao]
gi|508724984|gb|EOY16881.1| DEAD-box ATP-dependent RNA
helicase 39 isoform 1 [Theobroma cacao]
Length = 617
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = -2
Query: 263 YPFLTT-SPSRVFLRFRPLCSTTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKTQQTRT 87
YPFL PSRV F+PLC+ T + +RHS+LLERLR RHLKDS++T
Sbjct: 29 YPFLKLPKPSRVLPGFKPLCTATAPTPTIIEPDQLRHSMLLERLRTRHLKDSTRTPSPSK 88
Query: 86 PSVRSVEKEQEED 48
P + ++E D
Sbjct: 89 PQEKVTAFDKEGD 101
>ref|XP_006397149.1| hypothetical protein EUTSA_v10028511mg [Eutrema salsugineum]
gi|557098166|gb|ESQ38602.1| hypothetical protein
EUTSA_v10028511mg [Eutrema salsugineum]
Length = 633
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = -2
Query: 239 SRVFLRFRPLCSTTTAVEQDNSLEP--MRHSILLERLRIRHLKDSSKTQQTRTPSVRSVE 66
SR + FRPLC+ TA + N +P ++H+ILLERLR+RHLK+S+ Q R SV E
Sbjct: 37 SRFYHAFRPLCAAATAPTETNIADPDQLKHTILLERLRLRHLKESAPKPQQRPSSVVGAE 96
Query: 65 KEQEED 48
+E +
Sbjct: 97 EENNSN 102
>ref|XP_002307523.2| hypothetical protein POPTR_0005s22020g [Populus trichocarpa]
gi|550339504|gb|EEE94519.2| hypothetical protein
POPTR_0005s22020g [Populus trichocarpa]
Length = 577
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Frame = -2
Query: 254 LTTSPSRVFL--RFRPLC---STTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKTQ--- 99
L P+RV L FRPLC STT A E+D ++HSILLERLR+RHLK S K Q
Sbjct: 32 LPKKPTRVLLGFNFRPLCTLSSTTAATERDE----VKHSILLERLRLRHLKGSKKPQLTD 87
Query: 98 ---QTRTPSVRSVEKEQEED 48
QT V +E E+EED
Sbjct: 88 TQTQTALKPVVLIEGEEEED 107
>ref|XP_006383646.1| hypothetical protein POPTR_0005s22020g [Populus trichocarpa]
gi|550339503|gb|ERP61443.1| hypothetical protein
POPTR_0005s22020g [Populus trichocarpa]
Length = 650
Score = 58.9 bits (141), Expect = 7e-07
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
Frame = -2
Query: 254 LTTSPSRVFL--RFRPLC---STTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKTQ--- 99
L P+RV L FRPLC STT A E+D ++HSILLERLR+RHLK S K Q
Sbjct: 32 LPKKPTRVLLGFNFRPLCTLSSTTAATERDE----VKHSILLERLRLRHLKGSKKPQLTD 87
Query: 98 ---QTRTPSVRSVEKEQEED 48
QT V +E E+EED
Sbjct: 88 TQTQTALKPVVLIEGEEEED 107
>gb|EYU36549.1| hypothetical protein MIMGU_mgv1a002525mg [Mimulus guttatus]
Length = 663
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 6/55 (10%)
Frame = -2
Query: 248 TSPSRV-FLRFRPLCS-----TTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKT 102
T+P RV F RFRPLC+ T +++ +L+P++HSILLERLR RHLKDS++T
Sbjct: 35 TTPYRVDFHRFRPLCTAAATATIPEIDETETLQPIKHSILLERLRQRHLKDSAQT 89
>ref|XP_006286471.1| hypothetical protein CARUB_v10000464mg [Capsella rubella]
gi|482555177|gb|EOA19369.1| hypothetical protein
CARUB_v10000464mg [Capsella rubella]
Length = 625
Score = 56.2 bits (134), Expect = 5e-06
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Frame = -2
Query: 263 YPFLTTS--PSRVFLRFRPL----CSTTTAVEQDNSLEP--MRHSILLERLRIRHLKDSS 108
+PFL P R FRPL +TT+ + N +P ++H+ILLERLR+RHLKDS+
Sbjct: 27 FPFLRLRKPPCRFHHAFRPLYAAASATTSPTTETNVTDPDQLKHTILLERLRLRHLKDSA 86
Query: 107 KTQQTRTPSVRSVEKE 60
K Q R SV VE+E
Sbjct: 87 KPPQQRPSSVVGVEEE 102
>dbj|BAD43116.1| unnamed protein product [Arabidopsis thaliana]
Length = 621
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = -2
Query: 263 YPFLTTSPSRVFLRFRPLCS----TTTAVEQDNSLEP--MRHSILLERLRIRHLKDSSKT 102
+PFL R FRPL S T++ + N +P ++H+ILLERLR+RHLK+S+K
Sbjct: 27 FPFLRLHKPRFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKP 86
Query: 101 QQTRTPSVRSVEKE 60
Q R SV VE+E
Sbjct: 87 PQQRPSSVVGVEEE 100
>emb|CAB39640.1| putative protein [Arabidopsis thaliana] gi|7267668|emb|CAB78096.1|
putative protein [Arabidopsis thaliana]
Length = 496
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = -2
Query: 263 YPFLTTSPSRVFLRFRPLCS----TTTAVEQDNSLEP--MRHSILLERLRIRHLKDSSKT 102
+PFL R FRPL S T++ + N +P ++H+ILLERLR+RHLK+S+K
Sbjct: 27 FPFLRLHKPRFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKP 86
Query: 101 QQTRTPSVRSVEKE 60
Q R SV VE+E
Sbjct: 87 PQQRPSSVVGVEEE 100
>ref|NP_849348.1| DEAD-box ATP-dependent RNA helicase 39 [Arabidopsis thaliana]
gi|108861892|sp|Q56X76.2|RH39_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 39
gi|34365771|gb|AAQ65197.1| At4g09730 [Arabidopsis
thaliana] gi|51968836|dbj|BAD43110.1| unnamed protein
product [Arabidopsis thaliana]
gi|51969012|dbj|BAD43198.1| unnamed protein product
[Arabidopsis thaliana] gi|51969674|dbj|BAD43529.1|
unnamed protein product [Arabidopsis thaliana]
gi|332657387|gb|AEE82787.1| DEAD-box ATP-dependent RNA
helicase 39 [Arabidopsis thaliana]
Length = 621
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Frame = -2
Query: 263 YPFLTTSPSRVFLRFRPLCS----TTTAVEQDNSLEP--MRHSILLERLRIRHLKDSSKT 102
+PFL R FRPL S T++ + N +P ++H+ILLERLR+RHLK+S+K
Sbjct: 27 FPFLRLHKPRFHHAFRPLYSAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKP 86
Query: 101 QQTRTPSVRSVEKE 60
Q R SV VE+E
Sbjct: 87 PQQRPSSVVGVEEE 100
>ref|XP_004489911.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like isoform X1
[Cicer arietinum] gi|502093340|ref|XP_004489912.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like
isoform X2 [Cicer arietinum]
gi|502093343|ref|XP_004489913.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 39-like isoform X3 [Cicer
arietinum] gi|502093348|ref|XP_004489914.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 39-like isoform X4
[Cicer arietinum] gi|502093354|ref|XP_004489915.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like
isoform X5 [Cicer arietinum]
Length = 637
Score = 55.5 bits (132), Expect = 8e-06
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = -2
Query: 266 RYPFLTTSPSRVFL-----RFRPLCSTTTAVEQDNSLEPMRHSILLERLRIRHLKDSSKT 102
R+PFLT+ L RFRPL S T + E+ + +HSILLE+LRIRH+KD+ KT
Sbjct: 20 RFPFLTSLSKPTILLPPRFRFRPLSSITLSPEESLHSDQPKHSILLEKLRIRHIKDAVKT 79
Query: 101 QQTRTPSVRSVEKEQEEDQ 45
+V V+K Q+ ++
Sbjct: 80 ------TVEVVKKNQKPEE 92