BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00028816
         (670 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   262   8e-68
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   262   8e-68
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              243   4e-62
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   229   6e-58
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   228   2e-57
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su...   227   2e-57
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su...   227   2e-57
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub...   226   5e-57
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   226   5e-57
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   224   1e-56
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...   220   4e-55
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   211   2e-52
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   211   2e-52
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   211   2e-52
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   207   2e-51
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   205   1e-50
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus...   202   6e-50
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi...   200   4e-49
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   197   2e-48
ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutr...   196   6e-48

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  262 bits (669), Expect = 8e-68
 Identities = 133/222 (59%), Positives = 165/222 (74%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHVC+E  K+R L   SII+AL  +C S     K +LP LQI S+DC + D EKE+   
Sbjct: 1027 HFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV-DMEKEDSDC 1085

Query: 488  FCISVAVEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSRS 309
            FCI+V++  SK S I LDTVRD V+PFLLG+V+KG+   +KVDILWN  P+ S   KS S
Sbjct: 1086 FCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDVLKSSS 1144

Query: 308  GELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFL 129
            G L L+V+VS +C     W +L++A L+IMD+IDWERSHPDNIHDIF  YGIDA  KYFL
Sbjct: 1145 GRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFL 1204

Query: 128  RSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
             SLKS +SDIGKT+LPEHLLLVA CLS TGEF+GLNA+G+++
Sbjct: 1205 NSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1246


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  262 bits (669), Expect = 8e-68
 Identities = 133/222 (59%), Positives = 165/222 (74%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHVC+E  K+R L   SII+AL  +C S     K +LP LQI S+DC + D EKE+   
Sbjct: 1142 HFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV-DMEKEDSDC 1200

Query: 488  FCISVAVEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSRS 309
            FCI+V++  SK S I LDTVRD V+PFLLG+V+KG+   +KVDILWN  P+ S   KS S
Sbjct: 1201 FCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDVLKSSS 1259

Query: 308  GELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFL 129
            G L L+V+VS +C     W +L++A L+IMD+IDWERSHPDNIHDIF  YGIDA  KYFL
Sbjct: 1260 GRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFL 1319

Query: 128  RSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
             SLKS +SDIGKT+LPEHLLLVA CLS TGEF+GLNA+G+++
Sbjct: 1320 NSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1361


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  243 bits (620), Expect = 4e-62
 Identities = 126/222 (56%), Positives = 157/222 (70%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHVC+E  K+R L   SII+AL  +C S     K +LP LQI S+DC + D EKE+   
Sbjct: 896  HFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV-DMEKEDSDC 954

Query: 488  FCISVAVEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSRS 309
            FCI+V++  SK S I LDTVRD V+PFLLG+V+KG    +  D+L           KS S
Sbjct: 955  FCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGC-CIKNSDVL-----------KSSS 1002

Query: 308  GELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFL 129
            G L L+V+VS +C     W +L++A L+IMD+IDWERSHPDNIHDIF  YGIDA  KYFL
Sbjct: 1003 GRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFL 1062

Query: 128  RSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
             SLKS +SDIGKT+LPEHLLLVA CLS TGEF+GLNA+G+++
Sbjct: 1063 NSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMAR 1104


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  229 bits (584), Expect = 6e-58
 Identities = 123/223 (55%), Positives = 155/223 (69%), Gaps = 3/223 (1%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILS--RDCSITDAEKEND 495
            HFHVCK+ MKRR L VQSII++L+  C +     K  LP +QI S  R CS  D   E+D
Sbjct: 1016 HFHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHIDMPNEDD 1075

Query: 494  GTFCISVA-VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQK 318
             TFCI+V  VE SK S + LD +RD V+P+LL +VIKG    +KVDILW      SK  K
Sbjct: 1076 -TFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLKVSKPHK 1134

Query: 317  SRSGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARK 138
            S  GEL L+VFVS +    K+W +L+N  L+IMD+IDW RSHPDNI+ +   YGIDA  K
Sbjct: 1135 SSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWK 1194

Query: 137  YFLRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGI 9
            +FL +LKS +SD GKTIL EHLL+VA+CLS TGEF+GLN++G+
Sbjct: 1195 FFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGL 1237


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  228 bits (580), Expect = 2e-57
 Identities = 116/220 (52%), Positives = 152/220 (69%), Gaps = 1/220 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHV KE MK+R LNV SIIN LN  CKSN      +LP +QI  + CSI D  +E + T
Sbjct: 996  HFHVYKEIMKKRNLNVDSIINILNGRCKSN-----TNLPNVQISCKSCSIADNHREKEET 1050

Query: 488  FCISVA-VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             CI+V  VE SK S   L T++D ++PFLL +V+KG+    KVDILW   P  SK+    
Sbjct: 1051 LCITVTIVERSKNSSTRLATIQDLMIPFLLETVLKGLMEINKVDILWKDWPRISKTHNQP 1110

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
             GEL L+V +S + +  ++WNLL++  L IMD+IDW  S PDN+ D    YGIDA  K+F
Sbjct: 1111 YGELYLRVSMSADSEKTRLWNLLMDYCLPIMDMIDWTCSRPDNVRDFSLAYGIDAGWKFF 1170

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARG 12
            L+ L+S +SD+GK++LPEH+LLVA+CLSVTGEF+GLNA+G
Sbjct: 1171 LQRLESAISDVGKSVLPEHMLLVANCLSVTGEFVGLNAKG 1210


>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Solanum tuberosum]
          Length = 1233

 Score =  227 bits (579), Expect = 2e-57
 Identities = 117/222 (52%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE +K R L ++SI++ALN   ++       DLP L I  +DCS+ +A KE    
Sbjct: 771  HFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKS-E 829

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             CI+V+V E SK     LDT+RD V+PFLL +VIKG SAF+KVDILW  LP+ SKS +  
Sbjct: 830  ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGS 889

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
            +GEL L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YF
Sbjct: 890  TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 949

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L  L S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++
Sbjct: 950  LCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLT 991


>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Solanum tuberosum]
          Length = 1446

 Score =  227 bits (579), Expect = 2e-57
 Identities = 117/222 (52%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE +K R L ++SI++ALN   ++       DLP L I  +DCS+ +A KE    
Sbjct: 984  HFHIDKENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKS-E 1042

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             CI+V+V E SK     LDT+RD V+PFLL +VIKG SAF+KVDILW  LP+ SKS +  
Sbjct: 1043 ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGS 1102

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
            +GEL L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YF
Sbjct: 1103 TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 1162

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L  L S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++
Sbjct: 1163 LCKLHSAVSETGKKILPEHLVLAADSLTATGEFVPLSAKGLT 1204


>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
            lycopersicum]
          Length = 1446

 Score =  226 bits (576), Expect = 5e-57
 Identities = 115/222 (51%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE +K R L ++S+++ALN   ++       DLP L I  +DCS+ + +KE    
Sbjct: 984  HFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKS-E 1042

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             CI+V+V E SK     LDT+RD V+PFLL +VIKG SAF+KVDILW  LP+ SKS +  
Sbjct: 1043 ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGP 1102

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
            +GEL L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YF
Sbjct: 1103 TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 1162

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L  L S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++
Sbjct: 1163 LCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLT 1204


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  226 bits (576), Expect = 5e-57
 Identities = 115/222 (51%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE +K R L ++S+++ALN   ++       DLP L I  +DCS+ + +KE    
Sbjct: 676  HFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKS-E 734

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             CI+V+V E SK     LDT+RD V+PFLL +VIKG SAF+KVDILW  LP+ SKS +  
Sbjct: 735  ICITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGP 794

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
            +GEL L+VF+SE+C   K WN L+++ L+I DLIDWERS+PD++HD+   YGID A +YF
Sbjct: 795  TGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYF 854

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L  L S VS+ GK ILPEHL+L AD L+ TGEF+ L+A+G++
Sbjct: 855  LCKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLT 896


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  224 bits (572), Expect = 1e-56
 Identities = 114/223 (51%), Positives = 150/223 (67%), Gaps = 1/223 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+CKE +++R L V S++++L   C S     K  L  L I S+ CS       +D T
Sbjct: 899  HFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCNGDDDT 958

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FCI+V + E SK S   LD  RD V+PFLLG+V+KG    +KVDILWN  P  SK     
Sbjct: 959  FCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESKKIHGS 1018

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
            SGEL L+V +S      ++W++L++  L+IMDLIDW RSHPDN+HD    YGIDA  KYF
Sbjct: 1019 SGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDNVHDYCIAYGIDAGWKYF 1078

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            L +L++  +DIGK ILP+HL+LVADCLS TGEF+GLNA+GI++
Sbjct: 1079 LNNLETAANDIGKDILPQHLILVADCLSATGEFVGLNAKGIAQ 1121


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score =  220 bits (560), Expect = 4e-55
 Identities = 108/216 (50%), Positives = 153/216 (70%)
 Frame = -3

Query: 650  ERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGTFCISVA 471
            E ++RR L VQS+IN+L     ++ K  K  LP L+I S+DCS+    +E++ T CI+V+
Sbjct: 942  EILRRRRLTVQSVINSLYERHSTSRKGSKVKLPNLRIRSKDCSVPATREEDNDTCCITVS 1001

Query: 470  VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSRSGELCLK 291
            +E SK S+I L TV+D ++PFLL +++KG    EKVDILW+   N SK+ +  SGEL LK
Sbjct: 1002 IECSKNSVIQLITVQDLLIPFLLETIVKGFREIEKVDILWSDRSNTSKATRDSSGELYLK 1061

Query: 290  VFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFLRSLKST 111
            V +S +      W+ L+N  L IMDLIDW RSHP+N+++  + YGID+  K+FL +L+S 
Sbjct: 1062 VSMSGDSGVKSYWSTLMNDCLRIMDLIDWSRSHPENVNEFCSVYGIDSGWKFFLNNLESA 1121

Query: 110  VSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            VSD+GKTILPEHLLLVA+ LSVTG F+GL  +G+++
Sbjct: 1122 VSDVGKTILPEHLLLVANTLSVTGNFVGLTPKGLAR 1157


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  211 bits (536), Expect = 2e-52
 Identities = 109/222 (49%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHV KE MKR GL   SII++L R+CK+     K  +P + I ++DCS  + +KE +  
Sbjct: 979  HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1038

Query: 488  FCISVA-VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FC++V  VE  K + I L+T++ +V+PFLL +V+KG    +KVDILW     ASKS    
Sbjct: 1039 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1098

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
             GEL L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++F
Sbjct: 1099 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1158

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L +L+S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++
Sbjct: 1159 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1200


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  211 bits (536), Expect = 2e-52
 Identities = 109/222 (49%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHV KE MKR GL   SII++L R+CK+     K  +P + I ++DCS  + +KE +  
Sbjct: 1017 HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1076

Query: 488  FCISVA-VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FC++V  VE  K + I L+T++ +V+PFLL +V+KG    +KVDILW     ASKS    
Sbjct: 1077 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1136

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
             GEL L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++F
Sbjct: 1137 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1196

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L +L+S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++
Sbjct: 1197 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1238


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  211 bits (536), Expect = 2e-52
 Identities = 109/222 (49%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHV KE MKR GL   SII++L R+CK+     K  +P + I ++DCS  + +KE +  
Sbjct: 979  HFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDA 1038

Query: 488  FCISVA-VEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FC++V  VE  K + I L+T++ +V+PFLL +V+KG    +KVDILW     ASKS    
Sbjct: 1039 FCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDS 1098

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
             GEL L+V +S  C    +W+ L+N   +IMD+IDW RSHPDNI      YGIDA  ++F
Sbjct: 1099 FGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFF 1158

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L +L+S +SD GK ILPEHLL+VA+ LS TGEF+GLNA+G++
Sbjct: 1159 LTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA 1200


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  207 bits (527), Expect = 2e-51
 Identities = 106/222 (47%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFHVCKE +K+R L + S+I++LN  C S  +  + +LP LQI+++DC + D+  E+  T
Sbjct: 1005 HFHVCKEILKKRRLKMNSVIHSLNMRCDSMRQEGRMNLPSLQIITQDCPLADSLTEDGDT 1064

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
             C++V + E +K S + LD ++D ++ FLLG+VI+G +  ++VDI WN  P   K + S 
Sbjct: 1065 VCLTVTIAENTKNSFLQLDFIQDLLIHFLLGTVIRGFTEIDRVDITWNDRPKVPKPRCSH 1124

Query: 311  SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYF 132
             GEL L+V +S    S + W  L+N  L IMDLIDW RSHPDN H +   YGID+  KYF
Sbjct: 1125 -GELYLRVTMSGEGNS-RFWATLMNNCLPIMDLIDWTRSHPDNTHSLCLAYGIDSGWKYF 1182

Query: 131  LRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
            L SL+S   D+GKTI  EHLLLV++ LS TGEF+GLN +G++
Sbjct: 1183 LNSLESATLDVGKTIRLEHLLLVSNSLSATGEFVGLNVKGLT 1224


>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1438

 Score =  205 bits (521), Expect = 1e-50
 Identities = 113/224 (50%), Positives = 145/224 (64%), Gaps = 2/224 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE ++RR LNVQSII AL   C S G    ADL K+ I+ R+C       +   T
Sbjct: 992  HFHISKEIVRRRRLNVQSIIEALYAMCNSAG----ADL-KIMIIGRECDCCSTPND---T 1043

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FCISV + E    S   LD  R  V+PFLL +V+KG    +KVDILW   P +S      
Sbjct: 1044 FCISVTLTEKYNNSSKELDKTRVLVIPFLLKTVVKGFLEIKKVDILWIDRPGSS------ 1097

Query: 311  SGELCLKVFVS-ENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKY 135
             GELCL+V +S +  K   +WN+L++  + +MD+IDW RSHPDN+HDI   YGID  +K+
Sbjct: 1098 -GELCLRVSMSGKTRKGTTLWNMLMDDCIPVMDMIDWSRSHPDNVHDICTAYGIDVGQKH 1156

Query: 134  FLRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            FL  L+S   D+GKTILP+HLLLVADCLS TGEF+ LNA+GI +
Sbjct: 1157 FLNKLESATKDVGKTILPQHLLLVADCLSATGEFVSLNAKGIGQ 1200


>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Mimulus guttatus]
          Length = 1379

 Score =  202 bits (515), Expect = 6e-50
 Identities = 105/221 (47%), Positives = 146/221 (66%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ KE  ++R L ++S+INAL    K +G N K +LPKLQI SR CS  D   ++D  
Sbjct: 922  HFHINKEVARKRQLQIRSVINALYTNSKFSGVNLKINLPKLQITSRLCSEADICNQSDSI 981

Query: 488  FCISVAVEISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSRS 309
             CISV++  +      LD +RD V+P +L +VIKG   F+KVDILW   P   K  +S  
Sbjct: 982  ICISVSLIETFREFSDLDILRDMVMPVILQTVIKGFREFKKVDILWKDDPKHPKFSRSPP 1041

Query: 308  GELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKYFL 129
            G+  L+V +SE C+  K W++L +  L I ++IDW++SHPD+I DI   YG+DAA + F+
Sbjct: 1042 GKPFLRVVMSEYCERTKFWSILKDKCLPIRNIIDWKQSHPDDILDISEAYGVDAAWQCFV 1101

Query: 128  RSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGIS 6
             SL S +S  GK ILPEHL+L A+CLS TGEF+ LNA+G++
Sbjct: 1102 TSLHSAISGTGKPILPEHLILTANCLSATGEFVPLNAKGLA 1142


>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi|297332282|gb|EFH62700.1|
            NRPD1a [Arabidopsis lyrata subsp. lyrata]
          Length = 1456

 Score =  200 bits (508), Expect = 4e-49
 Identities = 108/224 (48%), Positives = 144/224 (64%), Gaps = 2/224 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ ++ +KR+ LNV+S++++LN + KS  +  K D+  L I S +   +D +   D +
Sbjct: 984  HFHISEKVLKRKQLNVESVVSSLNEQYKSRNRELKLDIVDLDIQSTNHCSSDDKAMKDDS 1043

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQKSR 312
            FCI+V V E SK S++ LD +R  ++PFLL S +KG    +KVDILW   P A K     
Sbjct: 1044 FCITVTVIEASKHSVLELDAIRLVLIPFLLDSPVKGSQEIKKVDILWTDRPKAPKRNGDH 1103

Query: 311  -SGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKY 135
             +GEL L+V +  +      W  LL   L IMD+IDW RSHPDNI    + YGIDA R  
Sbjct: 1104 LAGELYLRVTMYGDRGKRNCWTALLETCLPIMDMIDWSRSHPDNIRQCCSVYGIDAGRSI 1163

Query: 134  FLRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            F+ +L+S VSD GKTIL EHLLLVAD LSVTGEF+ LNA+G SK
Sbjct: 1164 FVANLESAVSDTGKTILKEHLLLVADSLSVTGEFVALNAKGWSK 1207


>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  197 bits (502), Expect = 2e-48
 Identities = 106/231 (45%), Positives = 149/231 (64%), Gaps = 9/231 (3%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            +F + KE   +R L ++S+++ L   C +  K  K  LP L I ++DCS  D   E+   
Sbjct: 664  NFCINKEVFMKRNLKLESVVHTLRANCNATPKKMKLKLPNLLIENKDCSEADFH-EDSSR 722

Query: 488  FCISVAV---EISK---GSLIP---LDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPN 336
             CISVAV   E+S    GSL     LD +R+ V+P LL +V+KG   F+KVDILW    +
Sbjct: 723  ICISVAVSQNELSNLHFGSLKEYEILDYLRNMVIPVLLRTVVKGFPEFKKVDILWKDEQS 782

Query: 335  ASKSQKSRSGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYG 156
             S+  K  SGE  ++VF+SENC+ A+ WN+L+  SL I  LIDW+RSHPD++HD    +G
Sbjct: 783  RSRFSKCSSGEPYVRVFMSENCERARFWNILVEKSLRIRSLIDWDRSHPDDVHDYGEAFG 842

Query: 155  IDAARKYFLRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            ID A   F+ SL S +S+ GKTILPEHL+  A+CLS+TGEF+ LNA+G+++
Sbjct: 843  IDTAWMCFVNSLNSAISETGKTILPEHLIATANCLSMTGEFVSLNAKGLAQ 893


>ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
            gi|557088296|gb|ESQ29076.1| hypothetical protein
            EUTSA_v10023214mg [Eutrema salsugineum]
          Length = 1465

 Score =  196 bits (498), Expect = 6e-48
 Identities = 108/224 (48%), Positives = 141/224 (62%), Gaps = 2/224 (0%)
 Frame = -3

Query: 668  HFHVCKERMKRRGLNVQSIINALNRECKSNGKNPKADLPKLQILSRDCSITDAEKENDGT 489
            HFH+ K+ MK++ LN +S++++LN++  S     K DL  LQI S +    D +  +D  
Sbjct: 991  HFHISKKAMKQKQLNAESVVSSLNKQYTSRKNELKLDLTDLQIQSTNHCSWDDKAMDDDR 1050

Query: 488  FCISVAV-EISKGSLIPLDTVRDFVVPFLLGSVIKGVSAFEKVDILWNYLPNASKSQ-KS 315
            FCI+V V E S  S + LD +R  ++PFLL S +KG    ++VDILW   P A K    S
Sbjct: 1051 FCITVTVVEASHFSSLELDAIRLVLIPFLLDSPVKGYREIKRVDILWADRPKAPKRNVNS 1110

Query: 314  RSGELCLKVFVSENCKSAKVWNLLLNASLEIMDLIDWERSHPDNIHDIFNFYGIDAARKY 135
              GEL LKV +  +      W+ LL   L +MD+IDW RSHPDNI    + YGIDA R  
Sbjct: 1111 LPGELFLKVTMYGDGGKKNFWSALLETCLPVMDVIDWTRSHPDNIRQCCSVYGIDAGRSI 1170

Query: 134  FLRSLKSTVSDIGKTILPEHLLLVADCLSVTGEFLGLNARGISK 3
            FL +L+S VSD GKTIL EHLLLVADCLSVTGEF+ LN++G  K
Sbjct: 1171 FLANLESAVSDTGKTILREHLLLVADCLSVTGEFVALNSKGWGK 1214