BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00027885
         (1289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22720.3| unnamed protein product [Vitis vinifera]              541   e-151
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   509   e-141
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   446   e-123
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              439   e-120
ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III s...   435   e-119
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   435   e-119
ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citr...   435   e-119
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   430   e-118
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   424   e-116
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   416   e-114
ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   416   e-113
ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polyp...   395   e-107
ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Popu...   385   e-104
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   380   e-103
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   377   e-102
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas...   374   e-101
ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III s...   370   e-100
ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III s...   368   4e-99
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   365   2e-98
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   363   7e-98

>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  541 bits (1394), Expect = e-151
 Identities = 283/411 (68%), Positives = 333/411 (81%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M +Q+G++LAV+LISSHFG+LV+KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAFAIQQE GFG  PRVVTQY  +F NILHR+RF+KFL IVS+ L KEC E+LEGL
Sbjct: 61   HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRLTLEQI+ RA SN++EG    QDALR SF+KLV A +VERCPA+EPFLAPPSE+E
Sbjct: 121  LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            TP A KRGAKSAKL+EE  T+EQRA  AA P++A+RFS+  +TGTDV        D P  
Sbjct: 181  TP-ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDV-------DDSPNV 232

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
            T GEKRK + LE+D +  A+ CEK+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL
Sbjct: 233  TAGEKRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVL 291

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1139
            +AMLEATR  EKK KTE S PLSMD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 292  SAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 351

Query: 1140 -TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
              ESYSVD+KNIIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD+
Sbjct: 352  AAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDK 402


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  509 bits (1310), Expect = e-141
 Identities = 275/411 (66%), Positives = 324/411 (78%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M +Q+G++LAV+LISSHFG+LV+KVC+CLLRKGTLTL  + R+TE+P QQVK+ +LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAFAIQQE      PRVVTQY  +F NILHR+RF+KFL IVS+ L KEC E+LEGL
Sbjct: 61   HNCVQAFAIQQEA-----PRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 115

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRLTLEQI+ RA SN+ E     QDALR SF+KLV A +VERCPA+EPFLAPPSE+E
Sbjct: 116  LQHGRLTLEQILDRAKSNQRE--PVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 173

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            TP A KRGAKSAKL+EE  T+EQRA  AA P++A+RFS+  +TGTDV        D P  
Sbjct: 174  TP-ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVD-------DSP-- 223

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
                 RK + LE+D +  A+ CEK+VLWRANFEEFVR LR KAC+ NV++RLDD A IVL
Sbjct: 224  ----NRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVL 278

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1139
            +AMLEATR  EKK KTE S PLSMD I E VMKSE GRSMT+E VR +L QLGC P  RG
Sbjct: 279  SAMLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRG 338

Query: 1140 -TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
              ESYSVD+KNIIE+AQN+EVES  LKRYGRDAYR+FRLLSK+ RL+ TD+
Sbjct: 339  AAESYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDK 389


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  446 bits (1148), Expect = e-123
 Identities = 245/411 (59%), Positives = 303/411 (73%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MV+QHGIK AV LI++HFG LV+KVCECLLRKG LTL  I R+TE+ S QVKN LLVLIQ
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAF ++Q G  G   ++ +QY  +F NI+HR RF KFL IVS+ L K+CVEL+E L
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L HGRLTL+Q+  RA S +NEG+    DA+R +F+KL+NA +VERCPAAEP L  P+E+E
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            T SA KR  KSAK++E + T+EQR   AATP EA RF + T T        K   +    
Sbjct: 181  T-SARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRT-EPAADGGKDENNSSSM 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
            TVG+KRK + LE +++  AT  E+ VLWRANFEEF+R LR KA + NVR+ LDD A IV+
Sbjct: 239  TVGKKRKLDALESETEGEAT-DEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVI 297

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1139
            +AMLEATR  EKK KTE S PLS+++I EEV+KSEEGR++T + VRA+L QL C P  + 
Sbjct: 298  SAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKA 357

Query: 1140 -TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
              ESYS+D K IIE+AQN+EVES VLKRYGRDAYRMFRLLS   RL+ TD+
Sbjct: 358  VNESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  439 bits (1128), Expect = e-120
 Identities = 235/403 (58%), Positives = 294/403 (72%), Gaps = 1/403 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M  ++GIKLAV+LIS+ FG   +KVC+CLLRKGTL L +I R  ++  QQVK YL VLIQ
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAFA++ EGG G  P VVTQY ++F+NILHR+RF K L IVSK L KEC EL E  
Sbjct: 61   HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L+HG LTL+QI+ R  SN+NEGN   QDALR SF KLVNA YVERCPA +PFL PP E++
Sbjct: 121  LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEK 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            TP A K  A SAK +EE    EQ     ATP +A+ F + TDT  D+  + KS G+PP  
Sbjct: 181  TP-ARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDINGD-KSIGNPPGV 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
             +G+KRK + L++D++  A   EK+V WRAN++E V  LR KAC+ NVR+RLD  A IVL
Sbjct: 239  VIGKKRKQDALKLDTESGAA-SEKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVL 297

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1139
            +AMLEAT+  EK  K E S  LS+  I E VM+SE G SMT+E +RA+L QLGCHPN  G
Sbjct: 298  SAMLEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVG 357

Query: 1140 TE-SYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKA 1265
             + +Y++D+K IIE+AQN+EVES VLKRYGR+A+R+FRLLSK+
Sbjct: 358  ADRTYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKS 400


>ref|XP_006490401.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X3 [Citrus sinensis]
          Length = 444

 Score =  435 bits (1119), Expect = e-119
 Identities = 232/411 (56%), Positives = 305/411 (74%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L+HGRLTL+Q+  RA S++ EGN    D+LR + VKLV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1136
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1137 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDK 405


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  435 bits (1119), Expect = e-119
 Identities = 232/411 (56%), Positives = 305/411 (74%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L+HGRLTL+Q+  RA S++ EGN    D+LR + VKLV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1136
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1137 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDK 405


>ref|XP_006421932.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|557523805|gb|ESR35172.1| hypothetical protein
            CICLE_v10004721mg [Citrus clementina]
          Length = 433

 Score =  435 bits (1119), Expect = e-119
 Identities = 232/411 (56%), Positives = 305/411 (74%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L+HGRLTL+Q+  RA S++ EGN    D+LR + VKLV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLG-CHPNAR 1136
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QLG       
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDA 354

Query: 1137 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
             ++SYS+D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+
Sbjct: 355  SSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDK 405


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  430 bits (1106), Expect = e-118
 Identities = 245/412 (59%), Positives = 294/412 (71%), Gaps = 2/412 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M + +GIK AV+LI+SHFG+LV+ VCE LLRKG LTL ++ R+TE+   Q+KN LL+LIQ
Sbjct: 1    MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQ F+ +Q G  G + +V TQY V+F+NILHRLRF KFL IVS+ L K C E+LEGL
Sbjct: 61   HNCVQPFSSEQIGAGGNEVKV-TQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGL 119

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRLTLEQI  RA  N      A QDA+R SF KL+N+R+VERCPA EPF+ P +   
Sbjct: 120  LQHGRLTLEQIYERARDN------AVQDAVRESFQKLLNSRFVERCPAPEPFVEPST--- 170

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
              S+ KRGAKSAKL E   T EQR   AA  L+  RFSI T +GT+   + K G      
Sbjct: 171  IKSSNKRGAKSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSM 230

Query: 780  TVGEKRKHETLEMDSKVMATICEKEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 956
             VGEKRKH   + D    +   E EV LWRANFEEF R LR KAC+ NVR+RLD  A  V
Sbjct: 231  GVGEKRKHGAADSDDAFGSN--ENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATV 288

Query: 957  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1136
            L AML+ATR  EKK KTE S  LSMD I EEVMKSE GRS+T++ VRA+L QLGC  ++ 
Sbjct: 289  LKAMLDATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGC--SSS 346

Query: 1137 GT-ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
            GT ++YS+D+K IIE+AQ EEVES VL+RYGRDAYRMFRLLSKAG L  TD+
Sbjct: 347  GTDDTYSIDLKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDK 398


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  424 bits (1091), Expect = e-116
 Identities = 228/410 (55%), Positives = 298/410 (72%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            M++++G K AV++I++HFG LV+KVCECLLRKG LT   + RYTE+  +QVKN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
             NCVQAF  +Q  GF   P+  TQY V+F+NILHR+RF+KFL I+S+   ++CVEL++GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            L+HGRLTL+Q+  RA S++ EGN    D+LR + VKLV A YVERCPA+EP L P SE+E
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
             P A K+G+KSAK I E  T+EQ+   AA P+EA RFS+ T+  +DV  + K+  +  P 
Sbjct: 181  GP-ARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP- 238

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
              GEKRKH+ LE+D   +A   E+ V++RANFE F+R LR K C+ +VR+ LDD A  VL
Sbjct: 239  --GEKRKHDVLELDECGVAD--EQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNARG 1139
            +AML+AT   EKK KT+ S PLS+ +I EEV+KSE GR+MT++HVRA+L QL        
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-------- 346

Query: 1140 TESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
                  D + IIE+AQNEEVES V KRYGRDAYR+FRLLSK+GRL+ TD+
Sbjct: 347  ------DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDK 390


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  416 bits (1070), Expect = e-114
 Identities = 233/411 (56%), Positives = 296/411 (72%), Gaps = 1/411 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MVS HGIKLAV LISS+FG L +KVC+CLLR+GT TL ++   TE+  + VKN LLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAFAI+Q GGFG + +++TQY  +F+NI+H+LRF KF+ IVS+ LGKEC E+LE L
Sbjct: 61   HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRL+L QII++      +G+S+  DA + SF +LVNAR+VERCPA +P L PP+E+E
Sbjct: 121  LQHGRLSLSQIIVKYKQASKQGDSS-ADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEE 179

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            T +A KRGAKSAK+  +  T+EQ+A  AA P+E+ RF +       V    K   D    
Sbjct: 180  T-AAKKRGAKSAKI--QAQTMEQQALAAAAPMESMRFLVENIWNDSVEKADKRTTD---V 233

Query: 780  TVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVL 959
              G KRK E LE ++K  AT  EKEVLWRANFEEF+R LR KACV NV+ R++++A IVL
Sbjct: 234  KCGMKRKQEDLESNTKDPAT-GEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVL 292

Query: 960  NAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCH-PNAR 1136
             A LE +R  E K + + S P S++AI +EV+K E G  M +E +RA+L  LGC  P   
Sbjct: 293  AATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLME 352

Query: 1137 GTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
              E+YSVD+KNIIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD+
Sbjct: 353  IDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDK 403


>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  416 bits (1068), Expect = e-113
 Identities = 233/413 (56%), Positives = 297/413 (71%), Gaps = 3/413 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MVS HGIKLAV LISS+FG L +KVC+CLLR+GT TL ++   TE+    VKN LLVLI 
Sbjct: 1    MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNCVQAFA+QQ GGFG +P+V+TQY  +F+NI+H+LRF KF+ IVS+ +GKEC E+ EGL
Sbjct: 61   HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRLTL +II R      +G+S+  DA R SF  LVNAR+VERCPA +P L PP+ +E
Sbjct: 121  LQHGRLTLTEIIERYKEASKQGDSS-ADAARDSFNSLVNARFVERCPAPDPLLEPPAAEE 179

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
            T +A KRGAKSAK+  +  T+EQ+A  AA P+E+ RF +      D+ +++    D   T
Sbjct: 180  T-AAKKRGAKSAKI--QAQTMEQQALAAAAPMESMRFLV-----EDIWNDSVERADKRTT 231

Query: 780  TV--GEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
             V  G KRK   LE ++K  AT  +KEVLWRANFEEF+R LR KACV NV+ R++++A +
Sbjct: 232  DVKCGMKRKQGDLESNTKDSAT-GKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAV 290

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCH-PN 1130
            VL A LE +R  E K + + S P S++AI +EV+K E G  M +E +RA+L  LGC  P 
Sbjct: 291  VLAATLELSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPL 350

Query: 1131 ARGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
                E+YSVD+KNIIE A+ EEVES VLKRYGR+AYRMFRLLSKA RLV TD+
Sbjct: 351  MEIDETYSVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDK 403


>ref|XP_002510780.1| DNA-directed RNA polymerase III 62 kDa polypeptide, putative [Ricinus
            communis] gi|223549895|gb|EEF51382.1| DNA-directed RNA
            polymerase III 62 kDa polypeptide, putative [Ricinus
            communis]
          Length = 485

 Score =  395 bits (1016), Expect = e-107
 Identities = 215/410 (52%), Positives = 288/410 (70%), Gaps = 2/410 (0%)
 Frame = +3

Query: 66   SQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQHN 245
            +QHGIK A ++I++HFG+LV+KVC+CLLRKG LT+ ++  +TE+   QVKN LLVLIQHN
Sbjct: 4    TQHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHN 63

Query: 246  CVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLLQ 425
            CVQA+        G   ++ T Y  +F+NILHR+RFSKFL I+S+   K CV+++EGLL+
Sbjct: 64   CVQAYRS------GDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLE 117

Query: 426  HGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDETP 605
            HGRLT++QI+ RA    N  NS   D+++ +  KLVN RY+E CPA+EP LAPP+E+E  
Sbjct: 118  HGRLTVKQIVDRA----NSRNSIGLDSVKENLCKLVNGRYIEHCPASEPVLAPPTEEED- 172

Query: 606  SAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTTV 785
             A KR AKSAK++ E  T+EQR    A P++A+RFS+  DT      E K   +      
Sbjct: 173  RAKKRSAKSAKIVIESETLEQRVLAVAVPMDAKRFSVDLDT------ELKDDAE------ 220

Query: 786  GEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIVLNA 965
             ++ K     +  KV     ++ VLWRANFEEF+R LR KAC+ NVR RLDD A IVL+A
Sbjct: 221  NDQNKSSDKHVGDKVAE---DQVVLWRANFEEFIRRLRHKACIENVRGRLDDGAAIVLSA 277

Query: 966  MLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPN-ARGT 1142
            ML+A+R  EKK KT  S PLS+++I EEV+K+E GR+MT++H+ +AL QLG  P   +  
Sbjct: 278  MLDASRTEEKKVKTASSVPLSLNSIYEEVIKNENGRNMTIDHIESALGQLGSPPPFVKAV 337

Query: 1143 ES-YSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
            E  Y++D K+IIE AQ++EVES VLKRYGRDAYR+FRLLSKA RL+ TD+
Sbjct: 338  EDLYTIDFKHIIEAAQSDEVESIVLKRYGRDAYRIFRLLSKASRLLETDK 387


>ref|XP_006374620.1| hypothetical protein POPTR_0015s13040g [Populus trichocarpa]
            gi|550322613|gb|ERP52417.1| hypothetical protein
            POPTR_0015s13040g [Populus trichocarpa]
          Length = 437

 Score =  385 bits (990), Expect = e-104
 Identities = 213/413 (51%), Positives = 284/413 (68%), Gaps = 3/413 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MVSQ+GIK AV++I++HFG LV+KVC+CLL+KG L L EI RYTE+    V+N LLVLIQ
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNC+Q F +++EGGFG   +V + Y V+F+N+LHR+RFSKF+ IVS+   K CV+L+E L
Sbjct: 61   HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRL+ EQI       ++  +S   +AL+ +  KLV ARYVERCP +EPFLA PSE+E
Sbjct: 121  LQHGRLSSEQIF---DGFRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEE 177

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
                 +RGAKSAK   E  T+EQR   AA P E  RFS   +   ++ ++     +   +
Sbjct: 178  AAPVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSF--ELNPEIGADRDKVENNSSS 235

Query: 780  TVGEKRKHETLEMDSKVMATICEKEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 956
             +G+KRK + LE D  +   + +K+V LWR NFEEF+R LR K C+  VR+RLDD A  V
Sbjct: 236  NIGDKRKLDALESD--IDGGVADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATV 293

Query: 957  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1136
              AML+A+R  EKK KT  S PLS ++I  EV+KSE+GR+MT+++V + L  L   P   
Sbjct: 294  FTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFV 353

Query: 1137 GT--ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
                 SYS+D K+ IE+AQ +EVES V K+YG+DAYRMFRLLSKAG L+ TD+
Sbjct: 354  RVVDNSYSIDFKHTIEVAQTDEVESIVYKKYGKDAYRMFRLLSKAGCLLETDK 406


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
            gi|462415465|gb|EMJ20202.1| hypothetical protein
            PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  380 bits (977), Expect = e-103
 Identities = 219/415 (52%), Positives = 291/415 (70%), Gaps = 6/415 (1%)
 Frame = +3

Query: 63   VSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQH 242
            ++Q+GIK AV++I+S+FG+LV+KVCE LLR+G L+L ++  +TE+  QQVKN LL+LIQH
Sbjct: 3    LTQYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 243  NCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLL 422
            NCVQ F+  Q  G    P+V TQY  +F+NI+HR RF+KFL +VS+ L  +   +L+ LL
Sbjct: 63   NCVQPFSFDQSEG----PKV-TQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLL 117

Query: 423  QHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDET 602
            ++GRLTL+QII  A S+K++G+SA +D+++ SF+KLVNA +VERCPA EP L   ++ E 
Sbjct: 118  ENGRLTLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEG 177

Query: 603  PSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPTT 782
            P A KRGAKSAK++E   T+EQR   AA P EA RFSI  D+  D       GG     +
Sbjct: 178  P-AKKRGAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEADAP-----GGKSDNMS 231

Query: 783  VGEKRKHETLEMDSKVMATICE---KEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
            VGEK       +   ++ +I +   + VLWRANFEEF+R LR KACV NVR+RLDD A +
Sbjct: 232  VGEK-------VGIGIVISIYQGYDEVVLWRANFEEFIRCLRHKACVENVRARLDDEAAV 284

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1133
            VL AML+ATR  EKK KTE S PLS++ I EEV+ SE GRS+T+  VR +LS L      
Sbjct: 285  VLRAMLKATRTAEKKVKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCDSSQE 344

Query: 1134 RGT---ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
            R     ESYS D+K I+E+AQ++EVE  VLKRYG+DAY MFR+LS AGR + TD+
Sbjct: 345  RDVDEDESYSADLKKILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDK 399


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  377 bits (968), Expect = e-102
 Identities = 211/413 (51%), Positives = 282/413 (68%), Gaps = 3/413 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MVSQ+GIK AV++I++HFG LV+KVC+CLL+KG L L EI RYTE+    V+N LLVLIQ
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGL 419
            HNC+Q F +++EGGFG   +V + Y V+F+N+LHR+RFSKF+ IVS+   K CV+L+E L
Sbjct: 61   HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 420  LQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSEDE 599
            LQHGRL+ EQI       ++  +S   +AL+ +  KLV ARYVERCP +EPFLA PSE+E
Sbjct: 121  LQHGRLSSEQIF---DGFRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEE 177

Query: 600  TPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPPT 779
                 +RGAKSAK   E  T+EQR   AA P E  RFS   +   ++ ++     +   +
Sbjct: 178  AAPVRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSF--ELNPEIGADRDKVENNSSS 235

Query: 780  TVGEKRKHETLEMDSKVMATICEKEV-LWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 956
             +G+KRK + LE D  +   + +K+V LWR NFEEF+R LR K C+  VR+RLDD A  V
Sbjct: 236  NIGDKRKLDALESD--IDGGVADKQVALWRVNFEEFIRRLRHKICIETVRTRLDDEAATV 293

Query: 957  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1136
              AML+A+R  EKK KT  S PLS ++I  EV+KSE+GR+MT+++V + L  L   P   
Sbjct: 294  FTAMLDASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFV 353

Query: 1137 GT--ESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
                 SYS+D K+ IE+AQ +  ES V K+YG+DAYRMFRLLSKAG L+ TD+
Sbjct: 354  RVVDNSYSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGCLLETDK 404


>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
            gi|561016615|gb|ESW15419.1| hypothetical protein
            PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  374 bits (961), Expect = e-101
 Identities = 216/412 (52%), Positives = 278/412 (67%), Gaps = 2/412 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MV+Q GIK AV+LI++HFG+LV+KVCE L   G+LTL ++ RY+E+   QVKN LLVL+Q
Sbjct: 1    MVTQFGIKFAVHLITNHFGNLVAKVCENLFSHGSLTLDQLVRYSELTKDQVKNSLLVLVQ 60

Query: 240  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 413
            HNC QAF  A + +     + RV TQY V+F+NI+HRLRF KFL  VS+ L +ECVELL+
Sbjct: 61   HNCCQAFISAPEDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLD 120

Query: 414  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSE 593
            GLL+ GRLTL+Q++ RA   K   N+     +R    KL+ AR VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRASQGKE--NAVDTKVVREILSKLLTARLVERCPAPEPVVSTSFK 178

Query: 594  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 773
            + T    KRGAKSAK+ E   T+EQR   AA P  A RFS T D  ++V  E  S  D  
Sbjct: 179  ETTTR--KRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADMRSNVDGETNSDDDQI 236

Query: 774  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
             T+V +         D+K      E+E+LWRANFEEF+R +R KA + N+R++ DD    
Sbjct: 237  -TSVEQN--------DAK------EEEILWRANFEEFIRHIRHKALIENIRTQHDDGTAT 281

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1133
            VL+A+LEAT+ VEKK K E S PLS+D I  EVMK++ GR+MT++ +RA+LSQLGC    
Sbjct: 282  VLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRM 341

Query: 1134 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
               ++YS+D+K IIE AQNEEVES VLKRYGRDAYRMFRLLSK      TDQ
Sbjct: 342  IVDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQ 393


>ref|XP_006589539.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  370 bits (951), Expect = e-100
 Identities = 211/412 (51%), Positives = 273/412 (66%), Gaps = 2/412 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MV+QHGIK AV+LI+ HFG +V+KVCE L   G LTL ++ RYT++   QV+N LLVL+Q
Sbjct: 1    MVTQHGIKFAVHLITKHFGKIVAKVCENLFIHGPLTLDQLVRYTDLTKDQVRNSLLVLVQ 60

Query: 240  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 413
            HNCVQAF  A Q +     + RV TQY V+F++ILHRLRF KFL IVS+ L +ECV+LL+
Sbjct: 61   HNCVQAFVSAPQDDDDDADRLRVRTQYLVLFDSILHRLRFPKFLEIVSRKLDEECVKLLD 120

Query: 414  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSE 593
            GLL+ GRLTL+Q++ R    K   N+     +R +  KL+ AR+VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRESQRKE--NAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFK 178

Query: 594  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 773
            + T    KRGAKSAK+ E   T+EQR   AA P +  RFS+  DT   V  E  S     
Sbjct: 179  ETTTR--KRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLAADTRCSVDRETNS----- 231

Query: 774  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
                      +  +M S       E ++LWRANFEEF+R LR K  + NVR++ DD    
Sbjct: 232  ----------DDAQMISVEEEVAKEGQILWRANFEEFIRHLRHKVLIENVRTQHDDGTAT 281

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1133
            VL+A+LEATR V+KK KTE S PLS+D I+ EVMK++ GR+MTV+ +RA+L QLGC P+ 
Sbjct: 282  VLSAVLEATRSVQKKVKTENSVPLSLDTIITEVMKTDTGRTMTVDRIRASLVQLGCSPSM 341

Query: 1134 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
               ESYS+D+K IIE A+NEEVES VLKRYG D YR+FRLL+K      TDQ
Sbjct: 342  ILEESYSIDLKKIIEPARNEEVESIVLKRYGTDGYRIFRLLAKDCCFHDTDQ 393


>ref|XP_003555382.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Glycine
            max]
          Length = 518

 Score =  368 bits (944), Expect = 4e-99
 Identities = 209/412 (50%), Positives = 273/412 (66%), Gaps = 2/412 (0%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            MV++HGIK  V+LI+ HFG +V+KVCE L   G LTL ++ RYT+    QV+N LLVL+Q
Sbjct: 1    MVTEHGIKFGVHLITKHFGKIVAKVCEKLFSHGPLTLDQLVRYTDFTKDQVRNSLLVLVQ 60

Query: 240  HNCVQAF--AIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLE 413
            HNC QAF  A Q +     + RV TQY V+F+NI+HRLRF KFL IVS+ L +ECV+LL 
Sbjct: 61   HNCAQAFVSAPQDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLDIVSRKLDEECVKLLV 120

Query: 414  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSE 593
            GLL+ GRLTL+Q++ R    K   N+     +R +  KL+ AR+VERCPA EP ++   +
Sbjct: 121  GLLRDGRLTLKQMVDRESQGKE--NAVPTKVVRETLCKLLTARFVERCPAPEPVVSTSFK 178

Query: 594  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 773
            + T    KRGAKSAK+ E   T+EQR   AA P +  RFS+T + G++V  E  S  D P
Sbjct: 179  ETTTK--KRGAKSAKIFEAPETLEQRVVDAAVPGDVIRFSLTANMGSNVDRETNSD-DVP 235

Query: 774  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
              +V E                  E+++LWRANFEEF+R LR K  + NVR++ DD    
Sbjct: 236  MISVEED--------------VAKEEQILWRANFEEFIRHLRHKVLIENVRTQHDDGTAT 281

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1133
            VL+A+LEAT  VEKK K + S PLS+D I+ EVMK++ GR+MT++ +RA+L QLGC P+ 
Sbjct: 282  VLSAVLEATGSVEKKVKMDNSVPLSLDTIITEVMKTDTGRTMTIDRIRASLVQLGCSPSM 341

Query: 1134 RGTESYSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
               ESY +D+K IIE A+NEEVES VLKRYGRDAYRMFRLL+K      TDQ
Sbjct: 342  ILEESYCIDLKKIIEPARNEEVESIVLKRYGRDAYRMFRLLAKDCCFHDTDQ 393


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  365 bits (937), Expect = 2e-98
 Identities = 214/418 (51%), Positives = 277/418 (66%), Gaps = 8/418 (1%)
 Frame = +3

Query: 60   MVSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQ 239
            +++Q+GIK AV+++++HFG+LV+KVCE LLRKG LTL  + R+TE+   QV N LL+LIQ
Sbjct: 2    VMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQ 61

Query: 240  HNCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALG--KECVELLE 413
            HNCVQAF       FG  P+  T Y  +F NILHR+RFSKF+ I S+ LG  K C ELLE
Sbjct: 62   HNCVQAFT-----DFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLE 116

Query: 414  GLLQHGRLTLEQIILRAISNKNEGNSAFQDALRTSFVKLVNARYVERCPAAEPFLAPPSE 593
            GLLQ+GRL++EQ++ RA S     N    D +  S  KL+NA +VERCPA EP L+P  E
Sbjct: 117  GLLQNGRLSMEQLVERAESR----NHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVE 172

Query: 594  DETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPP 773
            +  P   KRGAK+AK+ E   T+EQR   AA P+E  RFS+      D   EA+      
Sbjct: 173  EPPPR--KRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMG-----DTNPEAEKSEHHS 225

Query: 774  PTTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGI 953
              + G+KRKH+ LE+     +   +  +LWRAN++EF+R LR KAC+ +VRS+ DD    
Sbjct: 226  QIS-GQKRKHDDLEIAQD--SGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVN 282

Query: 954  VLNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNA 1133
            VL+A+LEATR  EK  KTE + PLS+D I EEVMK+E GRSMT++ V A+L+ LGC    
Sbjct: 283  VLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGC---- 338

Query: 1134 RGTESY------SVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLLSKAGRLVLTDQ 1289
             G + Y      +VD   IIE AQ +EVES VLKRYGRDAYRMFR LSK G LV T++
Sbjct: 339  PGMDDYKISMFTTVDFSMIIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK 396


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  363 bits (933), Expect = 7e-98
 Identities = 212/421 (50%), Positives = 275/421 (65%), Gaps = 12/421 (2%)
 Frame = +3

Query: 63   VSQHGIKLAVNLISSHFGHLVSKVCECLLRKGTLTLTEISRYTEIPSQQVKNYLLVLIQH 242
            V+  GI+ AV +I+ HFG+LV+KVCE LL+ G L L  + R T +  QQVKN LL+L+QH
Sbjct: 3    VTNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQH 62

Query: 243  NCVQAFAIQQEGGFGVQPRVVTQYTVVFENILHRLRFSKFLVIVSKALGKECVELLEGLL 422
            NCVQ F  + + G  VQ      Y  V++NILHRLRF+KFL +V++ LG EC +L+ GLL
Sbjct: 63   NCVQPFTQESKAGLKVQ------YIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLL 116

Query: 423  QHGRLTLEQIILRAISNKNEGNSAFQD--ALRTSFVKLVNARYVERCPAAEPFLAPPSED 596
            +HGRLT +Q++ RA       ++  QD  A + +FV+LVNAR+VERCPA EP L  P E 
Sbjct: 117  EHGRLTQQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQ 176

Query: 597  ETPSAGKRGAKSAKLIEERVTVEQRATTAATPLEAERFSITTDTGTDVTSEAKSGGDPPP 776
            E P   K   KSAK+++   T+EQR   AA P+EA RF ITT++ TD   + KS  +   
Sbjct: 177  EGPK--KPRGKSAKMVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQ-KSENNFSS 233

Query: 777  TTVGEKRKHETLEMDSKVMATICEKEVLWRANFEEFVRLLRIKACVTNVRSRLDDNAGIV 956
              VGEKRK +  ++DS+   +  +  +LWRANFE+F+R LR KAC+ +VR+R DD A +V
Sbjct: 234  MGVGEKRKFD--DLDSEEHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVV 291

Query: 957  LNAMLEATRRVEKKNKTEYSAPLSMDAILEEVMKSEEGRSMTVEHVRAALSQLGCHPNAR 1136
            L A+L+ATR  E K KT+YS PL MDAI EEVM SE   S+  E VRA L  L   P   
Sbjct: 292  LRAVLKATRNQETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVT 351

Query: 1137 GTES-------YSVDIKNIIEMAQNEEVESTVLKRYGRDAYRMFRLL---SKAGRLVLTD 1286
            G          YSVD+K IIE+ QN+EVES VLKRYG+DAYR+FRLL   S AGR   TD
Sbjct: 352  GEYEDENEDVLYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETD 411

Query: 1287 Q 1289
            +
Sbjct: 412  K 412