BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00025279
         (3205 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...  1468   0.0  
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1412   0.0  
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...  1401   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1400   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...  1385   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...  1381   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...  1375   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1371   0.0  
gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus...  1370   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...  1348   0.0  
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The...  1335   0.0  
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...  1305   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...  1296   0.0  
ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [O...  1295   0.0  
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...  1291   0.0  
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...  1280   0.0  
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...  1280   0.0  
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...  1278   0.0  
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...  1273   0.0  
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...  1271   0.0  

>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score = 1468 bits (3800), Expect = 0.0
 Identities = 710/918 (77%), Positives = 775/918 (84%), Gaps = 3/918 (0%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVTGH 2874
            ++VLNVAEKPSVAKAV+ ILSRNQGLRVREGRSRYNK+FEF YSIRGQ C M+VTSV GH
Sbjct: 1    MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSRYNKLFEFNYSIRGQHCQMVVTSVIGH 60

Query: 2873 LMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCDRE 2694
            LMELEFEDR+RKWHSCDPA LYHA VRK VP+DKL+IKRTLEEE+R CQWLVLWLDCDRE
Sbjct: 61   LMELEFEDRFRKWHSCDPAHLYHAPVRKFVPEDKLDIKRTLEEEARKCQWLVLWLDCDRE 120

Query: 2693 GENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQEIDL 2514
            GENIAFEV+EVC+ VN ++++WRARFSALIDREIHESVQNL+RPNQLFADAVD RQEIDL
Sbjct: 121  GENIAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEIDL 180

Query: 2513 RIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 2334
            RIGASFTRFQTMLL+DAFV+DF  DDR+LVLSYGPCQFPTLGFVVERYWEIQ+HEPEEFW
Sbjct: 181  RIGASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEFW 240

Query: 2333 MINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPHPLN 2154
             INCSH S+EG +TFNWMR H+FDYTCAVIIYEMC+Q+PTATVTKVR Q+KLKYPPHPLN
Sbjct: 241  TINCSHKSDEGTSTFNWMRAHLFDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPHPLN 300

Query: 2153 TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGHPE 1974
            TIELEKRASRYF MSSEHTMKVAEDLYQ GFISYPRTETD FS RTDLH IVQEQ GHP 
Sbjct: 301  TIELEKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHPI 360

Query: 1973 WGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRHFL 1794
            WGSYAQ+LLDPG GLWRNPS+GGHDDKAHPPIHPTKFS GESGWSQDH RLYELVVRHFL
Sbjct: 361  WGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFL 420

Query: 1793 ACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTP 1614
            ACVSQPAVG ET VEIDIAGE FS+SGRVIIAKNYLDVYRFESWGGSMIP Y+FGQQF P
Sbjct: 421  ACVSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIP 480

Query: 1613 TTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPT 1434
            TTLTLDSGVTR           +CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPT
Sbjct: 481  TTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPT 540

Query: 1433 NLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLDARV 1254
            NLGEALVMGYDDMGYELWKPYLRSMMECDMKAVS+GTKR++EVL TCL+QMKACFLDAR+
Sbjct: 541  NLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARL 600

Query: 1253 NRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFP 1074
            N+VKLLEAMA+FF+RSNR  GDEQ  VGD+VR C  C ESDM L+++PDG FMVGCLG+P
Sbjct: 601  NKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYP 660

Query: 1073 QCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDET 894
            QCRNVVWLPGS SEAA+TT  CN CTPGPV+ IQ KFR++EIPPNY+ DHLGC+ GCDE 
Sbjct: 661  QCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEI 720

Query: 893  LRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXX 714
            LRQL EIC TGSR      +A                   +ACIHC QTGHSSNDC    
Sbjct: 721  LRQLTEICGTGSR-----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRV 775

Query: 713  XXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 534
                          SGE+SIPCN+CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS
Sbjct: 776  PRSRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDS 835

Query: 533  INNSTAG-SAPHANSGRSASN-TRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPISG-R 363
            +N+S+ G SA  A +  SASN +R               G  T D  FVSATGDP+SG R
Sbjct: 836  LNSSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRR 895

Query: 362  CYVCGDPSHFANVCPNRG 309
            C+VCGDPSHFANVCPNRG
Sbjct: 896  CFVCGDPSHFANVCPNRG 913


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score = 1412 bits (3655), Expect = 0.0
 Identities = 679/921 (73%), Positives = 754/921 (81%), Gaps = 2/921 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQ--GLRVREGRSRYNKIFEFEYSIRGQRCNMLV 2892
            GGR IRVLNVAEKPSVAKAVSGILS+NQ  G+RVR+GRSRYNKIFEF Y+IR Q C ML 
Sbjct: 5    GGRVIRVLNVAEKPSVAKAVSGILSKNQPGGMRVRDGRSRYNKIFEFNYTIRNQPCQMLF 64

Query: 2891 TSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLW 2712
            TSVTGHLMELEF++RYRKWHSCDP DLY+A VRK VP+DKL+IKRTLE E+R CQW+VLW
Sbjct: 65   TSVTGHLMELEFDERYRKWHSCDPLDLYNAPVRKFVPEDKLDIKRTLEAEARSCQWIVLW 124

Query: 2711 LDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDA 2532
            LDCDREGENIAFEV++VC   N NLN+WRARFSALIDREIH+SVQ L++PNQLF+DAVD 
Sbjct: 125  LDCDREGENIAFEVLDVCRQANHNLNVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDV 184

Query: 2531 RQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAH 2352
            RQEIDLRIGASFTRFQTMLL+ AFV+DF  DDR++VLSYGPCQFPTLGFVVERYWEIQAH
Sbjct: 185  RQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNIVLSYGPCQFPTLGFVVERYWEIQAH 244

Query: 2351 EPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKY 2172
            EPEEFW INC+H S+EG ATFNWMRGH+FDYTC V IYEMC+Q+P ATVTKV+ Q+KLKY
Sbjct: 245  EPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVTIYEMCIQEPIATVTKVKQQEKLKY 304

Query: 2171 PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQE 1992
            PPHPL+TIELEKRASRYFRMSSE TMKVAEDLYQ GFISYPRTETDSFS +TDL  +VQE
Sbjct: 305  PPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDSFSEKTDLRTMVQE 364

Query: 1991 QQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYEL 1812
            Q+GHP WG YAQ+LLDP +GLWRNPS GGHDDKAHPPIHPTKFS GE+ WSQDH R+YEL
Sbjct: 365  QEGHPVWGIYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVYEL 424

Query: 1811 VVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIF 1632
            VVRHFLACVSQPAVG ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y F
Sbjct: 425  VVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSF 484

Query: 1631 GQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 1452
            GQQFTPTTLTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYA KD+N
Sbjct: 485  GQQFTPTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSN 544

Query: 1451 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKAC 1272
            TRFSPT LGEALVMGYDDMGYELWKPYLR+MMECDMKAVS+GTKRK+EVLETCLQQMKAC
Sbjct: 545  TRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMKAC 604

Query: 1271 FLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMV 1092
            F DAR N+ KLLEAMAIFF+RSNR  G EQ  VGD+VR CG C ESDM L+Q+PDG FMV
Sbjct: 605  FSDARTNKGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFMV 664

Query: 1091 GCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCI 912
            GCLG+PQCRNVVWLPGS SEA+VT   C SC+PGPVF IQ KFR++EIPPNY   HLGCI
Sbjct: 665  GCLGYPQCRNVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQHLGCI 724

Query: 911  GGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSN 732
            GGCD+ LRQL+EIC TGSRN    +                     S+C +CRQTGH SN
Sbjct: 725  GGCDDILRQLVEICGTGSRNNSNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQTGHLSN 784

Query: 731  DCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNF 552
            DC                  +GE+SIPCN CG PC +RTANTANN+GRKF+SCQ +ECNF
Sbjct: 785  DC--PSQASRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQSQECNF 842

Query: 551  FVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPI 372
            FVWED++N    G A  AN+  S S+ R               G ++ +  FVSATG+PI
Sbjct: 843  FVWEDNLN---GGRAERANTSASTSSGRGG-----RGRGRGQSGAHSSNVSFVSATGEPI 894

Query: 371  SGRCYVCGDPSHFANVCPNRG 309
            +GRC++CGDP HFANVCP RG
Sbjct: 895  TGRCFICGDPGHFANVCPRRG 915


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score = 1401 bits (3626), Expect = 0.0
 Identities = 681/923 (73%), Positives = 755/923 (81%), Gaps = 2/923 (0%)
 Frame = -3

Query: 3071 MSGGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLV 2892
            MSG  TI+VLNVAEKPSVAK+VSGILSRNQGLRVR+GRSR+N+IFEF YS+RGQ C+ML 
Sbjct: 1    MSG--TIKVLNVAEKPSVAKSVSGILSRNQGLRVRDGRSRFNRIFEFNYSVRGQPCHMLF 58

Query: 2891 TSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLW 2712
            TSVTGHLMELEFEDR+RKWHSCDPADLYHA VRK VP+DK++IKRTLEEE+R CQWLVLW
Sbjct: 59   TSVTGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLW 118

Query: 2711 LDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDA 2532
            LDCDREGENIAFEV++VC AVN +L I RARFSALI+REIH + QNL+ PN  F+DAVDA
Sbjct: 119  LDCDREGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDA 178

Query: 2531 RQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAH 2352
            RQEIDLRIGASFTRFQTM+L+D FVID   DDR+LVLSYGPCQFPTLGFVVERYWE+Q+H
Sbjct: 179  RQEIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSH 238

Query: 2351 EPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKY 2172
            EPEEFW INCSH  +EG+ATFNWMRGH+FD+TCAVI+YEMCVQ+P ATVTKVR Q+KLKY
Sbjct: 239  EPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKY 298

Query: 2171 PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQE 1992
            PP+PL+TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETD FS+RTDLHAIVQE
Sbjct: 299  PPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQE 358

Query: 1991 QQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYEL 1812
            QQ HPEWGSYAQ+LLDPGT LWRNPS GGHDDKAHPPIHPTKFS GE  WSQDH +LYEL
Sbjct: 359  QQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYEL 418

Query: 1811 VVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIF 1632
            VVRHFLACVSQPAVG ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  
Sbjct: 419  VVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTL 478

Query: 1631 GQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 1452
            GQQF PT+LTLD+GVTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKD+N
Sbjct: 479  GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 1451 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKAC 1272
            TRFSPT LGEALVMGYDDMGYELWKP LRSMME DMK VS+G KRK EVL TCLQQMKAC
Sbjct: 539  TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598

Query: 1271 FLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMV 1092
            FLDAR+N+VKLLEAMA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMV
Sbjct: 599  FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658

Query: 1091 GCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCI 912
            GCLGFPQCRN +WLPGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCI
Sbjct: 659  GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718

Query: 911  GGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSN 732
            GGCD+ LRQLIEIC TGSR      +A                    AC++C+QTGHSSN
Sbjct: 719  GGCDDILRQLIEICGTGSR-----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 731  DCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNF 552
            DC                  +GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +ECNF
Sbjct: 774  DC-PSQFSGSRNSRSRTSSQNGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNF 832

Query: 551  FVWEDSINNSTAG-SAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDP 375
            F+WED  NN T G S P A    SASN  S+             G    D  FVSATGDP
Sbjct: 833  FIWEDEHNNGTGGRSIPRAGINGSASN--SSRGGGRGRGRFGQNGARAADVTFVSATGDP 890

Query: 374  ISG-RCYVCGDPSHFANVCPNRG 309
            ISG RCYVCGDPSHFANVCPNRG
Sbjct: 891  ISGRRCYVCGDPSHFANVCPNRG 913


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score = 1400 bits (3624), Expect = 0.0
 Identities = 675/922 (73%), Positives = 759/922 (82%), Gaps = 4/922 (0%)
 Frame = -3

Query: 3062 GRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSV 2883
            GR + VLNVAEKPSVAK+V+ ILSRNQGLRVR+GRSRYN+IFEF Y+IRGQ C+ML TSV
Sbjct: 3    GRGVTVLNVAEKPSVAKSVANILSRNQGLRVRDGRSRYNRIFEFNYTIRGQPCHMLFTSV 62

Query: 2882 TGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDC 2703
             GHLMELEFEDRYRKWHSCDPADLYHA VRKSVP+DK +IKRTLEEE+R CQWLVLWLDC
Sbjct: 63   IGHLMELEFEDRYRKWHSCDPADLYHAPVRKSVPEDKKDIKRTLEEEARRCQWLVLWLDC 122

Query: 2702 DREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQE 2523
            DREGENIAFEVV+VC+A NP+L I RARFSALIDREIH++VQNL+ PN+ FADAVDARQE
Sbjct: 123  DREGENIAFEVVDVCTAANPHLTIKRARFSALIDREIHQAVQNLVEPNKWFADAVDARQE 182

Query: 2522 IDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPE 2343
            IDLRIGASFTRFQTML+KDAF+ID   DDR+++LSYGPCQFPTLGFVVERYWEIQAHEPE
Sbjct: 183  IDLRIGASFTRFQTMLMKDAFIIDTITDDRNIILSYGPCQFPTLGFVVERYWEIQAHEPE 242

Query: 2342 EFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPH 2163
            EFW INCSH S+EG+A F+W RGH+FDYTCAVIIYEMC ++PTATVT VR Q+KLKYPPH
Sbjct: 243  EFWSINCSHRSDEGVANFSWGRGHLFDYTCAVIIYEMCTEEPTATVTNVRQQEKLKYPPH 302

Query: 2162 PLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQG 1983
            PL+TIELEKRASRYFRMSSEHTMKVAE+LYQ+GFISYPRTETD+FS+RTDLHAIVQEQQG
Sbjct: 303  PLSTIELEKRASRYFRMSSEHTMKVAEELYQSGFISYPRTETDNFSSRTDLHAIVQEQQG 362

Query: 1982 HPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVR 1803
            HP+WG YAQ+LLDP  GLWRNP  GGHDDKAHPPIHPTKFS GESGWSQDH +LYELVVR
Sbjct: 363  HPQWGVYAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYELVVR 422

Query: 1802 HFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQ 1623
            HFLACVS+PAVG ETTVEIDIAGELFSA GRVI+ KNYLDVY++ESWGGS+IP Y  GQQ
Sbjct: 423  HFLACVSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTIGQQ 482

Query: 1622 FTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRF 1443
            F PTTLTLDSGVTR           SCMDK GIGTDATMHDHIKKLLDRFYATKDA+ RF
Sbjct: 483  FIPTTLTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDASMRF 542

Query: 1442 SPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLD 1263
            +PTNLGEALVMGYDDMGY+LWKPYLR++ME DMK+VS GTK K+EVL+T LQQMKACFLD
Sbjct: 543  TPTNLGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKACFLD 602

Query: 1262 ARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCL 1083
            AR+N+VKLLEAM IFF+RSNR GG+EQ+ +G++VR CG C ESDM LK+  DG FMVGCL
Sbjct: 603  ARLNKVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMVGCL 662

Query: 1082 GFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGC 903
            GFPQCRN VWLPGS SEA VTT  C++CTPGPV+ IQ KFRQ+EIPPNYD +HLGCIGGC
Sbjct: 663  GFPQCRNAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCIGGC 722

Query: 902  DETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDC- 726
            DE L QL EIC TG     P   A                   + C++C++TGHSSNDC 
Sbjct: 723  DEILTQLTEICGTG-----PRMPARPRGPTTSTGNAHHTNPRQAVCMNCQETGHSSNDCP 777

Query: 725  -XXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 549
                               SGE S+ CN CGTPC +RTANTANN+GRKFYSC  +ECNFF
Sbjct: 778  SQTLRSRNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQECNFF 837

Query: 548  VWEDSINNST-AGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPI 372
            VWED +N+ T  GS   +NS  +++  R+                ++ +  FVSATGDPI
Sbjct: 838  VWEDDLNSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRGRNASSSSNVTFVSATGDPI 897

Query: 371  SG-RCYVCGDPSHFANVCPNRG 309
            SG RC+VCGDPSHFANVCPNRG
Sbjct: 898  SGRRCFVCGDPSHFANVCPNRG 919


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score = 1385 bits (3584), Expect = 0.0
 Identities = 669/921 (72%), Positives = 745/921 (80%), Gaps = 2/921 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQ--GLRVREGRSRYNKIFEFEYSIRGQRCNMLV 2892
            GGR IRVLNVAEKPSVAKAVSGILS+NQ  G+RVR+GRSRYNKIFEF Y+IR Q C ML 
Sbjct: 5    GGRVIRVLNVAEKPSVAKAVSGILSKNQPGGIRVRDGRSRYNKIFEFNYTIRNQPCQMLF 64

Query: 2891 TSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLW 2712
            TSVTGHLME+EF +RYRKWHSCDP DLY+A +RK VP+DKL+IKRTLE E+R CQW++LW
Sbjct: 65   TSVTGHLMEIEFHERYRKWHSCDPLDLYNAPIRKFVPEDKLDIKRTLEAEARSCQWIILW 124

Query: 2711 LDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDA 2532
            LDCDREGENIAFEV++VC   N NL +WRARFSALIDREIH+SVQ L++PNQLF+DAVD 
Sbjct: 125  LDCDREGENIAFEVLDVCRQANHNLTVWRARFSALIDREIHQSVQTLVQPNQLFSDAVDV 184

Query: 2531 RQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAH 2352
            RQEIDLRIGASFTRFQTMLL+ AFV+DF  DDR+LVLSYGPCQFPTLGFVVERYWEIQAH
Sbjct: 185  RQEIDLRIGASFTRFQTMLLRGAFVLDFATDDRNLVLSYGPCQFPTLGFVVERYWEIQAH 244

Query: 2351 EPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKY 2172
            EPEEFW INC+H S+EG ATFNWMRGH+FDYTC V+IYEMC+Q+P ATVTKV+ Q+KLKY
Sbjct: 245  EPEEFWTINCTHNSDEGTATFNWMRGHLFDYTCGVMIYEMCIQEPIATVTKVKQQEKLKY 304

Query: 2171 PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQE 1992
            PPHPL+TIELEKRASRYFRMSSE TMKVAEDLYQ GFISYPRTETD FS +TDL  +VQE
Sbjct: 305  PPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQNGFISYPRTETDCFSDKTDLRTMVQE 364

Query: 1991 QQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYEL 1812
            Q+GHP WG+YAQ+LLDP +GLWRNPS GGHDDKAHPPIHPTKFS GE+ WSQDH R+YEL
Sbjct: 365  QEGHPVWGTYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVYEL 424

Query: 1811 VVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIF 1632
            VVRHFLACVSQPAVG ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y F
Sbjct: 425  VVRHFLACVSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSF 484

Query: 1631 GQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 1452
            GQQFTPTTLTLDSGV R            CMDKAGIGTDATMHDHIKKLLDRFYA KD+N
Sbjct: 485  GQQFTPTTLTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSN 544

Query: 1451 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKAC 1272
            TRFSPT LGEALVMGYDDMGYELWKPYLR+MMECDMKAVS GTKRK+EVLETCLQQMKAC
Sbjct: 545  TRFSPTKLGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMKAC 604

Query: 1271 FLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMV 1092
            F DAR N+ KLLEAMAIFF+RSNR    EQ  VG +VR CG C ESDM L+Q+PDG FMV
Sbjct: 605  FSDARTNKEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNFMV 664

Query: 1091 GCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCI 912
            GCLG+PQCRNVVWLPGS SEA+VT   C +C+PGPVF IQ KFRQ EIPP+Y   HLGCI
Sbjct: 665  GCLGYPQCRNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQHLGCI 724

Query: 911  GGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSN 732
            GGCD+ LRQL+EIC TGSR     N+                    S+C +CRQTGH SN
Sbjct: 725  GGCDDILRQLVEICGTGSR-----NSRGRGNPTAFSSAQRDNSRAQSSCAYCRQTGHLSN 779

Query: 731  DCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNF 552
            DC                  +GE+S+PCN CG PC +RTANTANN+GRKF+SCQ  ECNF
Sbjct: 780  DC--PSQASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECNF 837

Query: 551  FVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPI 372
            FVWED   N + G A  AN+  S S+ R               G ++ +  FVSATG+PI
Sbjct: 838  FVWED---NLSGGRAERANTSASTSSGRGG-----RGRGRGQSGAHSSNVSFVSATGEPI 889

Query: 371  SGRCYVCGDPSHFANVCPNRG 309
            + RC++CGDP HFANVCP RG
Sbjct: 890  TVRCFICGDPGHFANVCPRRG 910


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score = 1381 bits (3575), Expect = 0.0
 Identities = 676/926 (73%), Positives = 751/926 (81%), Gaps = 10/926 (1%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVTGH 2874
            I+VLNVAEKPSVAK+V+ ILSRNQ LRVR+GRSRYNKIFEF YSI GQ+C+MLVTSVTGH
Sbjct: 2    IKVLNVAEKPSVAKSVATILSRNQ-LRVRDGRSRYNKIFEFNYSINGQQCHMLVTSVTGH 60

Query: 2873 LMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCDRE 2694
            LME+EFEDR+RKWHSCDPADLY A VRK VP+DKL+IKRTLEEE+R C WLVLWLDCDRE
Sbjct: 61   LMEVEFEDRFRKWHSCDPADLYTAPVRKYVPEDKLDIKRTLEEEARRCHWLVLWLDCDRE 120

Query: 2693 GENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQEIDL 2514
            GENIAFEV+EVC  VN NL I RARFSALI+R+IHE+ QNLI PNQ F+DAVDARQEIDL
Sbjct: 121  GENIAFEVMEVCKGVNRNLTIRRARFSALIERDIHEAAQNLIAPNQWFSDAVDARQEIDL 180

Query: 2513 RIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 2334
            RIGASFTRFQTMLL+D FVID   DDR+LVLSYGPCQFPTLGFVVERYWEIQ+HEPEEFW
Sbjct: 181  RIGASFTRFQTMLLRDRFVIDSAQDDRNLVLSYGPCQFPTLGFVVERYWEIQSHEPEEFW 240

Query: 2333 MINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQ-KLKYPPHPL 2157
             INC+H S+EG+A+FNWMRGH+FDYT +VI+YEMCV++PTATV+    QQ KLKYPP+PL
Sbjct: 241  TINCTHRSDEGLASFNWMRGHLFDYTSSVILYEMCVEEPTATVSNRNHQQEKLKYPPYPL 300

Query: 2156 NTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGHP 1977
            +TIELEKRASRYFRMSSE TMKVAEDLYQAGFISYPRTETDSFS+RTDLH IVQE Q HP
Sbjct: 301  STIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHP 360

Query: 1976 EWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRHF 1797
             WGSYAQ+LLDPG GLWRNPS+GGHDDKAHPPIHPTKFS GES WSQDH RLYELVVRHF
Sbjct: 361  VWGSYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVVRHF 420

Query: 1796 LACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFT 1617
            LACVSQPAVG ET VEIDIAGE FSASGRVI+AKNYLDVYRFESWG SMIP Y+ GQQF 
Sbjct: 421  LACVSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFI 480

Query: 1616 PTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSP 1437
            P TLTLDSGVTR           SCMDKAGIGTDATMHDHIKKLLDRFY TKDANTRFSP
Sbjct: 481  PATLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSP 540

Query: 1436 TNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLDAR 1257
            TNLGEALVMGYDDMGYELWKP LRS+MECDMK VS+G K K+EVL TCLQQMKACFLDA+
Sbjct: 541  TNLGEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAK 600

Query: 1256 VNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGF 1077
            VN+VKLLEAMAIFF+RS+R  GD+ S +G+ VRPCG C E++M LK+  DG FMVGC GF
Sbjct: 601  VNKVKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRDGNFMVGCSGF 660

Query: 1076 PQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDE 897
            PQCRN VWLPG   EA +T  +CNSCTPGPV++IQ KFRQ+EIPP ++ +HLGCIGGCDE
Sbjct: 661  PQCRNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVNHLGCIGGCDE 720

Query: 896  TLRQLIEICRTGSR--------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGH 741
            TLRQLIEIC TGSR         T P N                     + CI+C QTGH
Sbjct: 721  TLRQLIEICGTGSRVQGGNGPPTTTPSN-------------PQRSNSRQAPCIYCYQTGH 767

Query: 740  SSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRE 561
            +S DC                  +GE+SIPC+ CGTPC +RTANTANN+GRKFYSC  + 
Sbjct: 768  ASTDCPSRISATRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQA 827

Query: 560  CNFFVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATG 381
            CNFFVWED++NN   GSAP +    + SN+ SNP                 D  FVSATG
Sbjct: 828  CNFFVWEDNLNN---GSAPRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVTFVSATG 884

Query: 380  DPISG-RCYVCGDPSHFANVCPNRGT 306
            +PISG RC+VCGDPSHFAN CP+RG+
Sbjct: 885  EPISGRRCFVCGDPSHFANACPSRGS 910


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score = 1375 bits (3559), Expect = 0.0
 Identities = 665/919 (72%), Positives = 736/919 (80%), Gaps = 4/919 (0%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVTGH 2874
            +RVLNVAEKPSVAK+V+ ILSR QGLR+REGRSRYNKI+EF YSI G  C ML TSVTGH
Sbjct: 2    VRVLNVAEKPSVAKSVANILSRGQGLRMREGRSRYNKIYEFNYSINGCHCQMLFTSVTGH 61

Query: 2873 LMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCDRE 2694
            LMELEFEDR+RKWHSCDPA L+ A VRK VP+DKL+IKRTLEEE+R CQWLVLWLDCDRE
Sbjct: 62   LMELEFEDRFRKWHSCDPALLFQAPVRKFVPEDKLDIKRTLEEEARNCQWLVLWLDCDRE 121

Query: 2693 GENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQEIDL 2514
            GENIAFEV++VC++VN +L I RARFSALIDR+IH +VQNL   N+ FADAVDARQEIDL
Sbjct: 122  GENIAFEVIDVCTSVNRHLTIKRARFSALIDRDIHHAVQNLDNANKYFADAVDARQEIDL 181

Query: 2513 RIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 2334
            RIGASFTRFQTMLL+DAFVID   DDR+LVLSYGPCQFPTLGF+VERYWEIQ+HEPEEFW
Sbjct: 182  RIGASFTRFQTMLLRDAFVIDSATDDRNLVLSYGPCQFPTLGFIVERYWEIQSHEPEEFW 241

Query: 2333 MINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPHPLN 2154
             INCSH S+EG ATF WMRGH+FD+ CAVIIYEMCV+DP ATVTKVR Q+K KYPP+PLN
Sbjct: 242  TINCSHRSDEGTATFGWMRGHLFDHACAVIIYEMCVEDPIATVTKVRQQEKPKYPPYPLN 301

Query: 2153 TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGHPE 1974
            TIELEKRASRYFRMSSEHTMKVAE+LYQAGFISYPRTETD FS RTDLHAIVQEQQGHP 
Sbjct: 302  TIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDGFSPRTDLHAIVQEQQGHPG 361

Query: 1973 WGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRHFL 1794
            WGSYAQ+LLDP +GLWRNPS GGHDDKAHPPIHPTKFS GES WSQDH RLYELVVRHFL
Sbjct: 362  WGSYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGESNWSQDHNRLYELVVRHFL 421

Query: 1793 ACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTP 1614
            ACVSQPAVG ETTVEIDIAGE+FSASGRVI+AKNYLDVYRFESWGGS++P Y  GQQF P
Sbjct: 422  ACVSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLPTYAVGQQFMP 481

Query: 1613 TTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPT 1434
            TTLTLDSGVTR            CMDK GIGTDATMHDHIKKLLDRFYATKDANTRFSPT
Sbjct: 482  TTLTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFSPT 541

Query: 1433 NLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLDARV 1254
            NLGEALVMGYDDMGY+LWKPYLR++ME DMKAVS G K K+EVLETCLQQMK CFLDAR 
Sbjct: 542  NLGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGCFLDARQ 601

Query: 1253 NRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFP 1074
            N+VKL EAMA+FF+RSNRPGGD+Q   G+ +R CG C E+DM L++  DG FMVGC+G+P
Sbjct: 602  NKVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMVGCMGYP 661

Query: 1073 QCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDET 894
            QCRN +WLPGS SEA  TT +CNSCTPGPV +IQ  FR++EIPPNY T+HLGCIGGCDE 
Sbjct: 662  QCRNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCIGGCDEI 721

Query: 893  LRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXX 714
            LRQL EIC TGSR      +A                    ACI+C Q+GHSS DC    
Sbjct: 722  LRQLTEICGTGSR------SAARGRGPTTSSNVQQNNTRQGACIYCHQSGHSSGDCPSQS 775

Query: 713  XXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 534
                          SGE S+ C  CG PC +RTANT  N+GRKFY C  +ECNFFVWED+
Sbjct: 776  SGPRSVRPRTMNAQSGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDN 835

Query: 533  INNSTAG---SAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPISG- 366
            ++N   G      + ++GR A    S                +     FVSATGDP SG 
Sbjct: 836  VSNGNGGRGFQRANVSAGRGAGGRGSG-------GRGAQGAGHATGGTFVSATGDPNSGR 888

Query: 365  RCYVCGDPSHFANVCPNRG 309
            RC+VCGDPSHFANVCPNRG
Sbjct: 889  RCFVCGDPSHFANVCPNRG 907


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score = 1371 bits (3549), Expect = 0.0
 Identities = 676/927 (72%), Positives = 746/927 (80%), Gaps = 1/927 (0%)
 Frame = -3

Query: 3083 SASTMSGGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRC 2904
            S     GGR I VLNVAEKPSVAK+V+GILS+NQGLR+REGRSRYNKI+EF YSIRGQ C
Sbjct: 28   STQMAGGGRPINVLNVAEKPSVAKSVAGILSKNQGLRIREGRSRYNKIYEFNYSIRGQPC 87

Query: 2903 NMLVTSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQW 2724
            +ML+TSVTGHLMEL+F++RYRKWHSCDPADLYHA VRK VP+DK +IK+TLEEE+R CQW
Sbjct: 88   HMLMTSVTGHLMELDFDERYRKWHSCDPADLYHAPVRKHVPEDKKDIKKTLEEEARRCQW 147

Query: 2723 LVLWLDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFAD 2544
            LVLWLDCDREGENIAFEV+EVC AVN +L + RARFSALIDREIH++VQNL+ PNQ FAD
Sbjct: 148  LVLWLDCDREGENIAFEVIEVCRAVNCHLVLRRARFSALIDREIHQAVQNLVDPNQWFAD 207

Query: 2543 AVDARQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWE 2364
            AVDARQEIDLRIGASFTRFQTMLLK+ F ID   DDR+LVLSYGPCQFPTLGFVVERYWE
Sbjct: 208  AVDARQEIDLRIGASFTRFQTMLLKN-FHIDSVTDDRNLVLSYGPCQFPTLGFVVERYWE 266

Query: 2363 IQAHEPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQ 2184
            IQAHE EEFW INCSH SEEG ATF+WMRGH+FDYT AVIIYEMCVQ+PTATVTKVR Q+
Sbjct: 267  IQAHESEEFWTINCSHKSEEGTATFSWMRGHLFDYTSAVIIYEMCVQEPTATVTKVRQQE 326

Query: 2183 KLKYPPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHA 2004
            KLKYPP+PL+TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFS+ T+LH 
Sbjct: 327  KLKYPPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSSGTNLHG 386

Query: 2003 IVQEQQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCR 1824
            IVQEQ GHP+WG YAQ+LLD   GLWRNP  GGHDDKAHPPIHPTKFS+GES WSQDH +
Sbjct: 387  IVQEQIGHPDWGPYAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYK 446

Query: 1823 LYELVVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIP 1644
            LYELVVRHFLACVSQPAVG ET VEI+IAGE+FS SGRVI+AKNYLDVYRFESWGG +IP
Sbjct: 447  LYELVVRHFLACVSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIP 506

Query: 1643 KYIFGQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYAT 1464
             Y+ GQQF PTTLTLDSGVTR           SCMDKAGIGTDATMHDHIKKLLDRFYA 
Sbjct: 507  TYVHGQQFIPTTLTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAI 566

Query: 1463 KDANTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQ 1284
            KDANTRF+PTN+GEALVMGYDDMGYELWKP LRSMME DMK VS+G K K++VL  CLQQ
Sbjct: 567  KDANTRFAPTNIGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQ 626

Query: 1283 MKACFLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDG 1104
            MKACFLDAR+ +VKLLEAM IFF+RS   GG++Q   G++VR CG C ES+M LK+  DG
Sbjct: 627  MKACFLDARLKKVKLLEAMGIFFERS---GGEDQQAAGEVVRQCGICQESNMVLKKSRDG 683

Query: 1103 KFMVGCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDH 924
              MVGCL FPQCRN VWLPGS SEAAVTT  CNSCTPGPV++IQ KFRQ EIPP ++ +H
Sbjct: 684  NLMVGCLAFPQCRNAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNH 743

Query: 923  LGCIGGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTG 744
            LGCIGGCDETLRQLIEIC TGSR  +P   A                    ACI+C+Q G
Sbjct: 744  LGCIGGCDETLRQLIEICGTGSR--IP---ARGRGPTASSNNGQQSNHRQRACIYCQQMG 798

Query: 743  HSSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIR 564
            HSS+DC                  SGE+SI C  CGTPC +RTANTANN+GRKFYSC  +
Sbjct: 799  HSSSDCPSQFSGSRNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQ 858

Query: 563  ECNFFVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSAT 384
            ECNFFVWED   N T    P A      S + SNP              +     FVSAT
Sbjct: 859  ECNFFVWEDDAKNGTR-RMPQA----GVSGSASNPSQRGGRGRGGQSRGHNTGMTFVSAT 913

Query: 383  GDPISG-RCYVCGDPSHFANVCPNRGT 306
            GDPISG RCYVCG+PSHFAN CPNRG+
Sbjct: 914  GDPISGRRCYVCGEPSHFANACPNRGS 940


>gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus guttatus]
          Length = 923

 Score = 1370 bits (3547), Expect = 0.0
 Identities = 666/925 (72%), Positives = 744/925 (80%), Gaps = 6/925 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQ---GLRVREGRSRYNKIFEFEYSIRGQRCNML 2895
            GGR +R LNVAEKPSVAKAVSGILS+N    GLRVREGRSRYNKIFEF Y+I+ Q+  M 
Sbjct: 5    GGRPLRALNVAEKPSVAKAVSGILSKNPSSGGLRVREGRSRYNKIFEFNYAIQNQQFQMS 64

Query: 2894 VTSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVL 2715
             TSVTGHLMELEFEDRYRKWHSCDP DLYHA VRK VPQDK +I++TLEEE+R CQWL+L
Sbjct: 65   FTSVTGHLMELEFEDRYRKWHSCDPVDLYHAPVRKHVPQDKSDIEKTLEEEARKCQWLIL 124

Query: 2714 WLDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVD 2535
            WLDCDREGENIAFEVVE C   N NLNIWRARFSALIDREIH++VQ+L+RPNQLFADAVD
Sbjct: 125  WLDCDREGENIAFEVVEACLRTNRNLNIWRARFSALIDREIHDAVQHLVRPNQLFADAVD 184

Query: 2534 ARQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQA 2355
             RQEIDLRIGASFTRFQTMLLKDAFV+DF  ++R+++LSYGPCQFPTLGFVVER+WEIQ+
Sbjct: 185  VRQEIDLRIGASFTRFQTMLLKDAFVLDFATEERNVILSYGPCQFPTLGFVVERFWEIQS 244

Query: 2354 HEPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLK 2175
            HEPEEFW INC+H SEEG ATF+WMRGH+FDYTCA IIYEMCV +P ATVT VR+Q+K +
Sbjct: 245  HEPEEFWTINCTHNSEEGTATFSWMRGHLFDYTCATIIYEMCVLEPNATVTNVRNQEKPR 304

Query: 2174 YPPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQ 1995
            YPPHPL+TIELEKRASRYFRMSSE TMKVAEDLYQAGFISYPRTETDSFS RTDLH IVQ
Sbjct: 305  YPPHPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSVRTDLHTIVQ 364

Query: 1994 EQQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYE 1815
            EQQGHP WGSYAQ+LLDP  GLWRNPS GGHDDKAHPPIHPTKFS GESGWSQDH ++YE
Sbjct: 365  EQQGHPTWGSYAQRLLDPEAGLWRNPSSGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYE 424

Query: 1814 LVVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYI 1635
            LVVRHFLACVSQPA+G  TTV+IDIAGE FSASG VI+AKNYLDVYRFE+WGGSMIP Y 
Sbjct: 425  LVVRHFLACVSQPAIGAVTTVDIDIAGEQFSASGTVILAKNYLDVYRFETWGGSMIPTYN 484

Query: 1634 FGQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDA 1455
            +GQQFTPTTLTLDSGVTR           SCMD AGIGTDATMHDHIKKLLDRFYATKD+
Sbjct: 485  YGQQFTPTTLTLDSGVTRPPPLLSEADLLSCMDNAGIGTDATMHDHIKKLLDRFYATKDS 544

Query: 1454 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKA 1275
            N RFSPT LGEALV GYDDMGYELWKP LR+MME DMKAVSMGTKRKSEVL++CLQQMKA
Sbjct: 545  NMRFSPTKLGEALVKGYDDMGYELWKPNLRAMMESDMKAVSMGTKRKSEVLDSCLQQMKA 604

Query: 1274 CFLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFM 1095
            CF+DAR+N+ KL EAM +FF+RSNR  G+EQ  +G++VR CG C ESDM L+++PDG FM
Sbjct: 605  CFVDARLNKEKLFEAMDVFFERSNRANGNEQQAIGEVVRKCGLCQESDMVLRKKPDGNFM 664

Query: 1094 VGCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGC 915
            VGCLG+PQCRNVVWLPGS SEA VTT +C++C+PGPV+MIQ KFR++EIPPNY+ DHLGC
Sbjct: 665  VGCLGYPQCRNVVWLPGSVSEATVTTTICSTCSPGPVYMIQFKFRRLEIPPNYNVDHLGC 724

Query: 914  IGGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSA---CIHCRQTG 744
            IGGCD+TLRQL+EIC TGSR T  V                       A        QT 
Sbjct: 725  IGGCDDTLRQLVEICGTGSRTTSSVPGRGQGHTSSSSSAQQSNYRDQGAWQTASSAWQTA 784

Query: 743  HSSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIR 564
              S+                     GE+SIPC  CG  C++RTANT  NKGRKFYSCQ +
Sbjct: 785  SGSHP-SQSSRGRSARSQRAGGAPDGESSIPCTSCGASCNLRTANTEANKGRKFYSCQAQ 843

Query: 563  ECNFFVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSAT 384
             C+FFVWED+IN  + G+A     GRSAS T                G  T D  FVSAT
Sbjct: 844  GCSFFVWEDNIN--SGGTAARGGGGRSASTTSRR----GGRGRGSRGGGRTNDVAFVSAT 897

Query: 383  GDPISGRCYVCGDPSHFANVCPNRG 309
            G+PISGRC+VCG+P HF+NVCP RG
Sbjct: 898  GEPISGRCFVCGEPGHFSNVCPCRG 922


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score = 1348 bits (3490), Expect = 0.0
 Identities = 663/935 (70%), Positives = 744/935 (79%), Gaps = 14/935 (1%)
 Frame = -3

Query: 3071 MSGGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLV 2892
            MSGGR+I VLNVAEKPSVAK+V+ ILSRNQGLRVR+GRSRYNKIFEF Y+IRGQ CNM+V
Sbjct: 1    MSGGRSITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNMIV 60

Query: 2891 TSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLW 2712
            TSVTGHLMEL FE+RYRKWHSCDP  L+HA V K VP+DKL+IKRTLE+ESR  QWLVLW
Sbjct: 61   TSVTGHLMELAFEERYRKWHSCDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVLW 120

Query: 2711 LDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDA 2532
            LDCDREGENIAFEVVEVC+AVN +LNI RA FSALI+R+IH++VQNL++PN+ FADAVDA
Sbjct: 121  LDCDREGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHDAVQNLVQPNKWFADAVDA 180

Query: 2531 RQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAH 2352
            RQEIDLRIGASFTRFQT+LLKDAF ID   DDR++VLSYGPCQFPTLGFVVERYWEIQ+H
Sbjct: 181  RQEIDLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQSH 240

Query: 2351 EPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKY 2172
            EPEEFW INCSH S++GI+TF+W RG++FDYTCAV+ YEMCVQ+ TATV  VR Q+ LKY
Sbjct: 241  EPEEFWTINCSHNSDDGISTFSWTRGNLFDYTCAVVFYEMCVQESTATVVNVRRQETLKY 300

Query: 2171 PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQE 1992
            PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETD FS RTDLH IV+E
Sbjct: 301  PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQRTDLHGIVRE 360

Query: 1991 QQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYEL 1812
            QQ H  WG+YAQ+LLDP + LWRNPS GGHDDKAHPPIHPTKFS GE GWSQDH RLYEL
Sbjct: 361  QQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHRLYEL 420

Query: 1811 VVRHFLACVSQPAVGGETTVEIDIAGELFSASGRV-IIAKNYLDVYRFESWGGSMIPKYI 1635
            VVRHFLACVSQPAVG  TTVEIDIAGELFS S R   I +NYLDVYRFESWGGS IP Y+
Sbjct: 421  VVRHFLACVSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIPTYV 480

Query: 1634 FGQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDA 1455
             GQQF PTTLTLDSGVTR           SCMDK GIGTDATMHDHIKKLLDRFYATKDA
Sbjct: 481  SGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDA 540

Query: 1454 NTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKA 1275
            NTRF+PTNLGEALVMGYDDMGY LWKP LR++ME +MKAVS GTKRK EVL +CLQQMK 
Sbjct: 541  NTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMKT 600

Query: 1274 CFLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFM 1095
            CFLDARVN+ KLLEAM +FF+RSN  GGDE   VG++V+ CG C +SDM LK+  DG +M
Sbjct: 601  CFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYM 660

Query: 1094 VGCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGC 915
            VGCLGFPQCRNVVWLPGS +EA VT+  C  CTPGPV++IQ KFRQ+EIPPNY+ +HLGC
Sbjct: 661  VGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLGC 720

Query: 914  IGGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSS 735
            +GGCD+ LRQL EIC TGSR                           S CI C+Q GHSS
Sbjct: 721  VGGCDDILRQLTEICGTGSR-------VSARGRGTSSSNVQRDNPGQSVCIFCQQVGHSS 773

Query: 734  NDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECN 555
            NDC                  SGE+S+ C+ CG+PC +RTANTANN+GRKFY CQ +ECN
Sbjct: 774  NDC----PSQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECN 829

Query: 554  FFVWEDSINNSTAGSAPHANSGRSASNTRSN------------PXXXXXXXXXXXXGQNT 411
            FFVWED+++N   G++   ++ RS+ +  SN                         GQ  
Sbjct: 830  FFVWEDNVDNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQ 889

Query: 410  IDAMFVSATGDPISG-RCYVCGDPSHFANVCPNRG 309
            I A FVSATG+PIS  RC+VCGDPSHFANVCPNRG
Sbjct: 890  IAATFVSATGEPISDRRCFVCGDPSHFANVCPNRG 924


>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
            gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
            2, partial [Theobroma cacao]
          Length = 845

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 639/851 (75%), Positives = 711/851 (83%), Gaps = 2/851 (0%)
 Frame = -3

Query: 3071 MSGGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLV 2892
            MSG  TI+VLNVAEKPSVAK+VSGILSRNQGLRVR+GRSR+N+IFEF YS+RGQ C+ML 
Sbjct: 1    MSG--TIKVLNVAEKPSVAKSVSGILSRNQGLRVRDGRSRFNRIFEFNYSVRGQPCHMLF 58

Query: 2891 TSVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLW 2712
            TSVTGHLMELEFEDR+RKWHSCDPADLYHA VRK VP+DK++IKRTLEEE+R CQWLVLW
Sbjct: 59   TSVTGHLMELEFEDRFRKWHSCDPADLYHAPVRKHVPEDKMDIKRTLEEEARRCQWLVLW 118

Query: 2711 LDCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDA 2532
            LDCDREGENIAFEV++VC AVN +L I RARFSALI+REIH + QNL+ PN  F+DAVDA
Sbjct: 119  LDCDREGENIAFEVIDVCRAVNCHLTIRRARFSALIEREIHHATQNLVDPNPWFSDAVDA 178

Query: 2531 RQEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAH 2352
            RQEIDLRIGASFTRFQTM+L+D FVID   DDR+LVLSYGPCQFPTLGFVVERYWE+Q+H
Sbjct: 179  RQEIDLRIGASFTRFQTMMLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSH 238

Query: 2351 EPEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKY 2172
            EPEEFW INCSH  +EG+ATFNWMRGH+FD+TCAVI+YEMCVQ+P ATVTKVR Q+KLKY
Sbjct: 239  EPEEFWTINCSHKLDEGVATFNWMRGHLFDHTCAVIVYEMCVQEPNATVTKVRHQEKLKY 298

Query: 2171 PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQE 1992
            PP+PL+TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETD FS+RTDLHAIVQE
Sbjct: 299  PPYPLSTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTDLHAIVQE 358

Query: 1991 QQGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYEL 1812
            QQ HPEWGSYAQ+LLDPGT LWRNPS GGHDDKAHPPIHPTKFS GE  WSQDH +LYEL
Sbjct: 359  QQDHPEWGSYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYEL 418

Query: 1811 VVRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIF 1632
            VVRHFLACVSQPAVG ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  
Sbjct: 419  VVRHFLACVSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTL 478

Query: 1631 GQQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDAN 1452
            GQQF PT+LTLD+GVTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKD+N
Sbjct: 479  GQQFIPTSLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSN 538

Query: 1451 TRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKAC 1272
            TRFSPT LGEALVMGYDDMGYELWKP LRSMME DMK VS+G KRK EVL TCLQQMKAC
Sbjct: 539  TRFSPTKLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKAC 598

Query: 1271 FLDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMV 1092
            FLDAR+N+VKLLEAMA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMV
Sbjct: 599  FLDARLNKVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMV 658

Query: 1091 GCLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCI 912
            GCLGFPQCRN +WLPGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCI
Sbjct: 659  GCLGFPQCRNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCI 718

Query: 911  GGCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSN 732
            GGCD+ LRQLIEIC TGSR      +A                    AC++C+QTGHSSN
Sbjct: 719  GGCDDILRQLIEICGTGSR-----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSN 773

Query: 731  DC--XXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIREC 558
            DC                     GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +EC
Sbjct: 774  DCPSQFSGSRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQEC 833

Query: 557  NFFVWEDSINN 525
            NFF+WED  NN
Sbjct: 834  NFFIWEDEHNN 844


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score = 1305 bits (3378), Expect = 0.0
 Identities = 634/916 (69%), Positives = 720/916 (78%), Gaps = 1/916 (0%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVTGH 2874
            IRVLNVAEKPSVAKAV+GILS+ + LRVREGRSRYNK++EFE++IRGQRC+ML TSVTGH
Sbjct: 81   IRVLNVAEKPSVAKAVAGILSQGR-LRVREGRSRYNKVYEFEHAIRGQRCHMLFTSVTGH 139

Query: 2873 LMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCDRE 2694
            LME+ F +RY+KWHSCDPADL+ A ++K VPQDKL+IKRTLEEE+R CQWLVLWLDCDRE
Sbjct: 140  LMEIVFHERYKKWHSCDPADLFSAPIQKHVPQDKLDIKRTLEEEARTCQWLVLWLDCDRE 199

Query: 2693 GENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQEIDL 2514
            GENIAFEVVEVC+  N NL+IWRA FSALIDREI  +VQNL RPNQLF+DAVDARQEIDL
Sbjct: 200  GENIAFEVVEVCTTANRNLDIWRAHFSALIDREIRHAVQNLGRPNQLFSDAVDARQEIDL 259

Query: 2513 RIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 2334
            RIGASFTRFQTMLLK+AFV++ + DD+++++SYGPCQFPTLGFVVERYWEIQAHEPEEFW
Sbjct: 260  RIGASFTRFQTMLLKNAFVLNISDDDKNVIVSYGPCQFPTLGFVVERYWEIQAHEPEEFW 319

Query: 2333 MINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPHPLN 2154
             INCSH ++EGIATFNW RGH+FDY+CA+IIYEMCV++PTATV KV  Q++ KYPPHPL+
Sbjct: 320  TINCSHKTDEGIATFNWTRGHLFDYSCALIIYEMCVEEPTATVKKVSHQERRKYPPHPLS 379

Query: 2153 TIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGHPE 1974
            T+EL+KRAS+YFRMSSEHTMKVAEDLYQAGFISYPRTETDSFS  TDL A+V+EQQGHPE
Sbjct: 380  TLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSPNTDLQALVREQQGHPE 439

Query: 1973 WGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRHFL 1794
            WGSYAQ+LL P  GLWRNPS GGHDDKAHPPIHPTKFS GES WS DH RLYELVVRHFL
Sbjct: 440  WGSYAQRLLSP-EGLWRNPSSGGHDDKAHPPIHPTKFSAGESSWSPDHHRLYELVVRHFL 498

Query: 1793 ACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTP 1614
            ACVSQPA+G  TTVEIDIAGE+F ASG +II KNYL+VYRFESWGGS IP Y FGQQF P
Sbjct: 499  ACVSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYRFESWGGSTIPTYAFGQQFIP 558

Query: 1613 TTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPT 1434
            T LTLDS VTR           SCMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT
Sbjct: 559  TRLTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPT 618

Query: 1433 NLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLDARV 1254
             LGEALVMGYD MG++LWKP LRS ME DMKAVS G K KSEVL +CLQQMK CFLD + 
Sbjct: 619  TLGEALVMGYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLASCLQQMKDCFLDVKS 678

Query: 1253 NRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFP 1074
            ++ KL E M IFF+RSN PGGD   + G  VR C  C ES+M L++RPDG FMVGCL FP
Sbjct: 679  HKAKLFETMGIFFERSNTPGGDNLHLAGGKVRSCQQCQESEMVLRRRPDGSFMVGCLRFP 738

Query: 1073 QCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDET 894
             CRNVVWLPG+ SEA VT  VCN C P PVF IQ KFR+MEIPPN+DT+HLGCIGGCDET
Sbjct: 739  LCRNVVWLPGAISEALVTEHVCNVCNPEPVFKIQFKFRRMEIPPNFDTEHLGCIGGCDET 798

Query: 893  LRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDCXXXX 714
            LR+LI+IC TG RN    +                       C  CRQ+GHSSNDC    
Sbjct: 799  LRELIQICGTGPRNLSSGSGTRGRQPTQFSGSAQRRNTSQVVCARCRQSGHSSNDCPQIS 858

Query: 713  XXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 534
                          SG   + C  C  PC+VRTANT NN+GR+FY C  +ECNFF+WED+
Sbjct: 859  RSQDAQRPGHGNSNSGGADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDA 918

Query: 533  INNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPISG-RCY 357
            I +   G++         +  RS+             G  +  A FV+ATG+P+S  RC+
Sbjct: 919  IGSGNRGAS-------RVNGNRSSVRGGQAGRGRGRRGARSGAATFVTATGEPVSDRRCF 971

Query: 356  VCGDPSHFANVCPNRG 309
             CGDPSHFANVCPNRG
Sbjct: 972  SCGDPSHFANVCPNRG 987


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score = 1296 bits (3355), Expect = 0.0
 Identities = 624/845 (73%), Positives = 695/845 (82%), Gaps = 10/845 (1%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQ--GLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVT 2880
            I VLNVAEKPSVAK+V+ ILSRNQ  GLRVREG+SRYNKIFEF Y I GQ C+MLVTSVT
Sbjct: 2    INVLNVAEKPSVAKSVATILSRNQQHGLRVREGQSRYNKIFEFNYVINGQNCHMLVTSVT 61

Query: 2879 GHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCD 2700
            GHLMELEF+DR+RKWHSCDPADLYHA VRK VP+DK  IKRTLEEE+R CQWL+LWLDCD
Sbjct: 62   GHLMELEFDDRFRKWHSCDPADLYHAPVRKFVPEDKTNIKRTLEEEARRCQWLILWLDCD 121

Query: 2699 REGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQEI 2520
            REGENIAFEVV+VC + N  L + RARFSALIDREIHE+ QNL+ PNQ F+DAVDARQEI
Sbjct: 122  REGENIAFEVVDVCRSANRYLTVRRARFSALIDREIHEAAQNLVSPNQWFSDAVDARQEI 181

Query: 2519 DLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEE 2340
            DLRIGASFTRFQT+LL+D FVID   DDR+LVLSYGPCQFPTLGF+VERYWEIQ+HE EE
Sbjct: 182  DLRIGASFTRFQTLLLRDKFVIDSAQDDRNLVLSYGPCQFPTLGFIVERYWEIQSHESEE 241

Query: 2339 FWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPHP 2160
            FW INCSHTS EGIA F+WMRGH+FDYT AVI+YE+CV +PTATVTKV+ ++K KYPP+P
Sbjct: 242  FWTINCSHTSVEGIANFSWMRGHLFDYTSAVILYELCVLEPTATVTKVQQKEKQKYPPYP 301

Query: 2159 LNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGH 1980
            L+TIELEKRASRYF MSSE TMKVAEDLYQ+GFISYPRTETD FS+RTDLH IV++QQ H
Sbjct: 302  LSTIELEKRASRYFHMSSEQTMKVAEDLYQSGFISYPRTETDGFSSRTDLHTIVRDQQAH 361

Query: 1979 PEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRH 1800
            P WGSYAQ+LLDPGTGLWRNPS GGHDDKAHPPIHPTKFS GE+GWSQDH R+YELVVRH
Sbjct: 362  PIWGSYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVRH 421

Query: 1799 FLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQF 1620
            FLACVSQPAVG ETTVEIDIAGE FSASGRVI+AKNYLDVYRFESWGGSMIP Y+ GQQF
Sbjct: 422  FLACVSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQF 481

Query: 1619 TPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFS 1440
             PTTLTLDSGVTR           SCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFS
Sbjct: 482  MPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFS 541

Query: 1439 PTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFLDA 1260
            PTNLGEALVMGYDDMGYELWKP LRSMME DMK VSMG K K+EVLETCLQQMK CFLDA
Sbjct: 542  PTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDA 601

Query: 1259 RVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLG 1080
            R+N+VKLLEAMA+FF+RS+R  G++     DIVR CG C E++M L++  DG FMVGC+G
Sbjct: 602  RINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMVGCMG 661

Query: 1079 FPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCD 900
            +PQCRN +WLPG   EA VTT VCN CTPGPV++IQ KFRQ+EIPP +  +HLGCIGGCD
Sbjct: 662  YPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVNHLGCIGGCD 721

Query: 899  ETLRQLIEICRTGSR--------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTG 744
            +TLRQL +IC TGSR        NT P N+                    + C+HC QTG
Sbjct: 722  DTLRQLTDICGTGSRVQARARAPNTTPSNS-------------QQSNTRFATCVHCHQTG 768

Query: 743  HSSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIR 564
            H+S DC                   GE+S+ C  CGTPC++RTANTANN+GRKFYSC  +
Sbjct: 769  HASIDCPLQLSGSRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQ 828

Query: 563  ECNFF 549
             CNFF
Sbjct: 829  SCNFF 833


>ref|XP_006649448.1| PREDICTED: DNA topoisomerase 3-alpha-like [Oryza brachyantha]
          Length = 923

 Score = 1295 bits (3350), Expect = 0.0
 Identities = 625/921 (67%), Positives = 726/921 (78%), Gaps = 2/921 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSR-NQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVT 2889
            GG  IRVLNVAEKPSVAK+V+ ILSR + G+R REGRSRYN++FEF YSI G+ C+MLVT
Sbjct: 6    GGGAIRVLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFGYSIGGRACHMLVT 65

Query: 2888 SVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWL 2709
            SVTGHLMELEF+DR+R+WHSCDPADL+HA VRKSVPQDK +IKRTLEEE+R CQWLVLWL
Sbjct: 66   SVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARNCQWLVLWL 125

Query: 2708 DCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDAR 2529
            DCDREGENIA+EV+++CS  N  LNIWRARFSALIDREIHE+VQ+L RPN+LFADAVDAR
Sbjct: 126  DCDREGENIAYEVIDICSGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDAR 185

Query: 2528 QEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHE 2349
            QEIDLRIGASFTRFQTMLL+DAFV+D TGD+R+++LSYGPCQFPTLGF+VER+WEIQAHE
Sbjct: 186  QEIDLRIGASFTRFQTMLLRDAFVLDDTGDERNMILSYGPCQFPTLGFIVERFWEIQAHE 245

Query: 2348 PEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYP 2169
            PEEFW INCSHTS+EG A+F W+RGH+FDY+ AV+IYEMCV++P ATV  VR+Q+KLKYP
Sbjct: 246  PEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYP 305

Query: 2168 PHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQ 1989
            P+PL+TIEL+KRASRYFRMSSEHTMKVAE+LYQAGFISYPRTETD+FS  TDLH+IVQEQ
Sbjct: 306  PYPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVQEQ 365

Query: 1988 QGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELV 1809
              HP WG+YAQ+LLDP   LWRNPS+GGHDDKAHPPIHPTKFS GE+ WS +H +LYELV
Sbjct: 366  TAHPVWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWSDNHKKLYELV 425

Query: 1808 VRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFG 1629
            VRHFLAC SQPAVG ETTVEIDIAGE F+ASGRV+++KNYLDVYRF+SWGG+++P Y  G
Sbjct: 426  VRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLSKNYLDVYRFDSWGGTLLPTYTIG 485

Query: 1628 QQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 1449
            QQF PTTLTLDSGVTR           SCMDKAGIGTDATMHDHIKKLLDR YATKDANT
Sbjct: 486  QQFIPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDANT 545

Query: 1448 RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            RFSPTNLGEALVMGYD+MGYELWKPYLRSMME DMK+VS+GTK K+EVLE CLQQMKACF
Sbjct: 546  RFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKAEVLENCLQQMKACF 605

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            LDAR N+VKL +AM  FF RS+RP  + Q+ + + VRPC AC+ES+M LK+RP G+FMVG
Sbjct: 606  LDARANKVKLFDAMGAFFARSSRPINETQNSI-EAVRPCAACNESEMVLKRRPTGEFMVG 664

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C GFPQCRNVVWLPGS SEA+VT QVC +C PGPV+ IQ KFR+ +IPP++D DHLGCIG
Sbjct: 665  CRGFPQCRNVVWLPGSLSEASVTDQVCPTCAPGPVYKIQFKFRRRDIPPSFDVDHLGCIG 724

Query: 908  GCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSND 729
            GCD+ L++L EI R GS N     A                    +     RQ    +N 
Sbjct: 725  GCDDILKELTEISRFGSHNQTATPARNQSQNPSGARQGAPRQDLHTDFRPARQ---FTNG 781

Query: 728  CXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 549
                               +    + C  CG PC +RTANT  N+GRKFY CQ   C FF
Sbjct: 782  HTPVVNPQGFRSTHTGSSGNASGQVQCTSCGEPCILRTANTEANRGRKFYKCQDPACGFF 841

Query: 548  VWEDSINNST-AGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPI 372
             WED + NS   G      SG   ++  +              G+N    MFV+ATG+P+
Sbjct: 842  AWEDDVQNSVPRGRGRGGRSGSRQASASAGRRGGSQARGRRGRGRNADGMMFVAATGEPV 901

Query: 371  SGRCYVCGDPSHFANVCPNRG 309
             G C+VCGDP+HFAN CP+RG
Sbjct: 902  HGSCFVCGDPTHFANACPSRG 922


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
            gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
            Japonica Group]
          Length = 928

 Score = 1291 bits (3341), Expect = 0.0
 Identities = 625/934 (66%), Positives = 729/934 (78%), Gaps = 15/934 (1%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSR-NQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVT 2889
            GG  IRVLNVAEKPSVAK+V+ ILSR + G+R REGRSRYN++FEF+YSI G+ C+MLVT
Sbjct: 6    GGGAIRVLNVAEKPSVAKSVAEILSRPSGGMRSREGRSRYNRVFEFDYSIGGRACHMLVT 65

Query: 2888 SVTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWL 2709
            SVTGHLMELEF+DR+R+WHSCDPADL+HA VRKSVPQDK +IKRTLEEE+R CQWLVLWL
Sbjct: 66   SVTGHLMELEFDDRFRRWHSCDPADLFHAPVRKSVPQDKQDIKRTLEEEARKCQWLVLWL 125

Query: 2708 DCDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDAR 2529
            DCDREGENIA+EV+++C+  N  LNIWRARFSALIDREIHE+VQ+L RPN+LFADAVDAR
Sbjct: 126  DCDREGENIAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDAR 185

Query: 2528 QEIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHE 2349
            QEIDLRIGASFTRFQTMLLKDAFV+D TGDDR+++LSYGPCQFPTLGF+VER+WEIQAHE
Sbjct: 186  QEIDLRIGASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEIQAHE 245

Query: 2348 PEEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYP 2169
            PEEFW INCSHTS+EG A+F W+RGH+FDY+ AV+IYEMCV++P ATV  VR+Q+KLKYP
Sbjct: 246  PEEFWTINCSHTSDEGTASFGWIRGHLFDYSSAVVIYEMCVEEPMATVQNVRNQEKLKYP 305

Query: 2168 PHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQ 1989
            P+PL+TIEL+KRASRYFRMSSEHTMKVAE+LYQAGFISYPRTETD+FS  TDLH+IV EQ
Sbjct: 306  PYPLSTIELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQ 365

Query: 1988 QGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELV 1809
              HP WG+YAQ+LLDP   LWRNPS+GGHDDKAHPPIHPTKFS GE+ W+ +H +LYELV
Sbjct: 366  VAHPNWGTYAQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWTDNHKKLYELV 425

Query: 1808 VRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFG 1629
            VRHFLAC SQPAVG ETTVEIDIAGE F+ASGRV++AKNYLDVYRF+SWGG+++P YI G
Sbjct: 426  VRHFLACCSQPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLLPTYIIG 485

Query: 1628 QQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 1449
            QQF PTTLTLDSG+TR            CMDKAGIGTDATMHDHIKKLLDR YATKDANT
Sbjct: 486  QQFVPTTLTLDSGMTRPPPLLAEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDANT 545

Query: 1448 RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            RFSPTNLGEALVMGYD+MGYELWKPYLRSMME DMK+VS+GTK KSEVLE CLQQMKACF
Sbjct: 546  RFSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSEVLENCLQQMKACF 605

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            LDAR N+VKL +AM  FF RS+RP  + Q+ + + VRPC AC+ES+M LKQRP G+FMVG
Sbjct: 606  LDARANKVKLFDAMGTFFARSSRPVNETQNSI-ETVRPCAACNESEMFLKQRPTGEFMVG 664

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C GFPQCRNVVWLP S S AAVT QVC +C PGPV+ IQ KFR+ +IPPN+D DHLGCIG
Sbjct: 665  CRGFPQCRNVVWLPRSLSGAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVDHLGCIG 724

Query: 908  GCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSS-- 735
            GCD+ L++L+E+ R GS +     A                          RQ  H+S  
Sbjct: 725  GCDDILKELMELSRFGSHSQTATPARNQSQTASGVRQG-----------SSRQDLHTSFH 773

Query: 734  ------NDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSC 573
                  N                    +    + C  C  PC +RTANT  N+GRKFY C
Sbjct: 774  PAVQFTNGQTPVVNPQGFRSTHTQSSGNASGQVQCTSCREPCVLRTANTEANRGRKFYKC 833

Query: 572  QIRECNFFVWEDSINNST------AGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNT 411
            Q   C FF WED + NS        G    ++S +S+++  +              G+N 
Sbjct: 834  QNLACGFFAWEDDVENSAPRGRGGRGRGGRSSSRQSSASASAGRRGGTQGRGRRGRGRNA 893

Query: 410  IDAMFVSATGDPISGRCYVCGDPSHFANVCPNRG 309
               MFV+ATG+P+ G C++CGDP+HFANVCPN G
Sbjct: 894  DGMMFVAATGEPVYGSCFICGDPTHFANVCPNLG 927


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score = 1280 bits (3311), Expect = 0.0
 Identities = 626/920 (68%), Positives = 716/920 (77%), Gaps = 2/920 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTS 2886
            GG  + VLNVAEKPSVAK+V+GILSR    R REGRSRYNKIFEF+Y+I GQ C ML+TS
Sbjct: 5    GGGPVTVLNVAEKPSVAKSVAGILSRGT-FRTREGRSRYNKIFEFDYAINGQPCRMLMTS 63

Query: 2885 VTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLD 2706
            V GHLMELEF DRYRKWHSCDPADLY A V K VP+DK +IK+TLEEE+R   WLVLWLD
Sbjct: 64   VIGHLMELEFADRYRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARKSDWLVLWLD 123

Query: 2705 CDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQ 2526
            CDREGENIAFEVV+VC AV  NL I RA FSALIDR+IHE+VQNL  PNQLFA+AVDARQ
Sbjct: 124  CDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIDRDIHEAVQNLRDPNQLFAEAVDARQ 183

Query: 2525 EIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEP 2346
            EIDLRIGASFTRFQTMLL+D F ID TG++RS V+SYGPCQFPTLGF+VERYWEIQAHEP
Sbjct: 184  EIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEP 243

Query: 2345 EEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKV-RDQQKLKYP 2169
            EEFW INCSH SEEG+ATFNWMRGH+FDY  AVI+YEMCV++PTATV  V   +++ KYP
Sbjct: 244  EEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKYP 303

Query: 2168 PHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQ 1989
            P+PLNTIELEKRASRYFR+SSEHTMKVAE+LYQAGFISYPRTETDSFS+RTDL A+V+EQ
Sbjct: 304  PYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLRAMVEEQ 363

Query: 1988 QGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELV 1809
              HP WGSYAQ+LL+P  GLWRNP++GGHDDKAHPPIHPTKFS+GES WS+DH  +YELV
Sbjct: 364  TRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELV 423

Query: 1808 VRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFG 1629
            VRH+LACVSQPAV  ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  G
Sbjct: 424  VRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKG 483

Query: 1628 QQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 1449
            QQF PTTLTLD+ VTR           SCMDKAGIGTDATMHDHIKKLLDR YATKDANT
Sbjct: 484  QQFIPTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT 543

Query: 1448 RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            RFSPTNLGEALVMGYDDMGYELWKP LR++ME DM  VS+G K K+EVLETCLQQMKACF
Sbjct: 544  RFSPTNLGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQMKACF 603

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            LDARV + KLLEAM IFF+RSN     E    G++VR C  C+ESDM L++  DG FMVG
Sbjct: 604  LDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDGNFMVG 663

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C+ +PQCRN VWLPG T EA+VTT VC SC PGPV+ I  KFRQ+ IPP +D +HLGC+G
Sbjct: 664  CMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNHLGCVG 723

Query: 908  GCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSND 729
            GCD+ L+QLI+IC TGSR+     A                    + CIHC+Q GH+S +
Sbjct: 724  GCDDILKQLIDICGTGSRS----QARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHASTN 779

Query: 728  CXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 549
            C                  + E+++ CN CG+ C +RTANT  N+GR+F+SC  + C+FF
Sbjct: 780  CPSRVPASRNSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFF 839

Query: 548  VWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPIS 369
             WEDSINNS+  +   +NSG S     S              G+      FVSATG+P+S
Sbjct: 840  AWEDSINNSSGNATTGSNSGGS-GRRGSRGRGRGGRGGQSSGGRRGSGTSFVSATGEPVS 898

Query: 368  G-RCYVCGDPSHFANVCPNR 312
            G RC+ CGDPSHFAN CPNR
Sbjct: 899  GIRCFSCGDPSHFANACPNR 918


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score = 1280 bits (3311), Expect = 0.0
 Identities = 628/929 (67%), Positives = 720/929 (77%), Gaps = 9/929 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTS 2886
            GG  + VLNVAEKPSVAK+V+GILSR    R REGRSRYNKIFEF+Y+I GQ C ML+TS
Sbjct: 5    GGGPVTVLNVAEKPSVAKSVAGILSRGS-FRTREGRSRYNKIFEFDYAINGQPCRMLMTS 63

Query: 2885 VTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLD 2706
            V GHLMELEF DRYRKWHSCDPADLY A V K VP+DK +IK+TLEEE+R   WLVLWLD
Sbjct: 64   VIGHLMELEFSDRYRKWHSCDPADLYQAPVMKHVPEDKRDIKKTLEEEARKSDWLVLWLD 123

Query: 2705 CDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQ 2526
            CDREGENIAFEVV+VC AV  NL I RA FSALIDREIHE+VQNL  PNQLFA+AVDARQ
Sbjct: 124  CDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIDREIHEAVQNLRDPNQLFAEAVDARQ 183

Query: 2525 EIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEP 2346
            EIDLRIGASFTRFQTMLL+D F ID TG++RS V+SYGPCQFPTLGF+VERYWEIQAHEP
Sbjct: 184  EIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEP 243

Query: 2345 EEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKV-RDQQKLKYP 2169
            EEFW INCSH SEEGIATFNWMRGH+FDY  AVI+YEMCV++PTATV  V   +++ KYP
Sbjct: 244  EEFWTINCSHQSEEGIATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKYP 303

Query: 2168 PHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQ 1989
            P+PLNTIELEKRASRYFR+SSEHTMKVAE+LYQAGFISYPRTETD+FS+RTDL A+V+EQ
Sbjct: 304  PYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDAFSSRTDLRAMVEEQ 363

Query: 1988 QGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELV 1809
              HPEWG+YAQ+LL+P  GLWRNP +GGHDDKAHPPIHPTKFS+GES WS+DH  +YELV
Sbjct: 364  TRHPEWGAYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELV 423

Query: 1808 VRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFG 1629
            VRH+LACVSQPAV  ETTVEIDI+GE FSASGR I+AKNYL+VYRFESWGGS+IP Y  G
Sbjct: 424  VRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKG 483

Query: 1628 QQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 1449
            QQF PT+LTLDS VTR           SCMDKAGIGTDATMHDHIKKLLDR YATKDANT
Sbjct: 484  QQFIPTSLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT 543

Query: 1448 RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            RFSPTNLGEALVMGYDDMGYELWKP LR++ME DM  VS+G K K+EVLETCLQQMKACF
Sbjct: 544  RFSPTNLGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGRKTKAEVLETCLQQMKACF 603

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            LDARV + KLLEAM IFF+RSN     E    G++VR C  C+ESDM L++  DG FMVG
Sbjct: 604  LDARVKKSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNFMVG 663

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C+ +PQCRN VWLPG T EA+VTT VC SC PGPV+ I  KFRQ+ IPP ++ +HLGC+G
Sbjct: 664  CMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFEVNHLGCVG 723

Query: 908  GCDETLRQLIEICRTGSR-------NTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQ 750
            GCD  L+QLI+IC TGSR       +TVP N                     + CIHC+Q
Sbjct: 724  GCDGILKQLIDICGTGSRSQARRAPDTVPPN-----------NIRGSNTRQSNVCIHCQQ 772

Query: 749  TGHSSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQ 570
             GH+S++C                  + E+++ CN CGT C +RTANT  N+GR+F+SC 
Sbjct: 773  RGHASSNCPSRVSASRNSRPTGTNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCP 832

Query: 569  IRECNFFVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVS 390
             + C+FF WED I+NS+  +   +NSG   S  R N             G+      FVS
Sbjct: 833  TQGCSFFAWEDGISNSSGNATTGSNSG--GSGRRGNRGRGRGGRGGQSGGRRGSGTSFVS 890

Query: 389  ATGDPISG-RCYVCGDPSHFANVCPNRGT 306
            ATG+P+SG RC+ CGDPSHFAN CPNR +
Sbjct: 891  ATGEPVSGIRCFSCGDPSHFANACPNRNS 919


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score = 1278 bits (3308), Expect = 0.0
 Identities = 629/927 (67%), Positives = 719/927 (77%), Gaps = 9/927 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTS 2886
            GG  + VLNVAEKPSVAK+V+GILSR    R REGRSRYNKIFEF+Y+I GQ C ML+TS
Sbjct: 5    GGGPVTVLNVAEKPSVAKSVAGILSRGT-FRTREGRSRYNKIFEFDYAINGQPCRMLMTS 63

Query: 2885 VTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLD 2706
            V GHLMELEF +RYRKWHSCDPADLY A V K VP+DK +IK+TLEEE+R   WLVLWLD
Sbjct: 64   VIGHLMELEFANRYRKWHSCDPADLYQAPVMKHVPEDKKDIKKTLEEEARKSDWLVLWLD 123

Query: 2705 CDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQ 2526
            CDREGENIAFEVV+VC AV  NL I RA FSALIDR+IHE+VQNL  PNQLFA+AVDARQ
Sbjct: 124  CDREGENIAFEVVDVCRAVKHNLFIRRAHFSALIDRDIHEAVQNLRDPNQLFAEAVDARQ 183

Query: 2525 EIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEP 2346
            EIDLRIGASFTRFQTMLL+D F ID TG++RS V+SYGPCQFPTLGF+VERYWEIQAHEP
Sbjct: 184  EIDLRIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEP 243

Query: 2345 EEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKV-RDQQKLKYP 2169
            EEFW INCSH SEEG+ATFNWMRGH+FDY  AVI+YEMCV++PTATV  V   +++ KYP
Sbjct: 244  EEFWTINCSHQSEEGLATFNWMRGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKYP 303

Query: 2168 PHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQ 1989
            P+PLNTIELEKRASRYFR+SSEHTMKVAE+LYQAGFISYPRTETDSFS+RTDL A+V+EQ
Sbjct: 304  PYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLCAMVEEQ 363

Query: 1988 QGHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELV 1809
            + HP WGSYAQ+LL+P  GLWRNP +GGHDDKAHPPIHPTKFS+GES WS+DH  +YELV
Sbjct: 364  RRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELV 423

Query: 1808 VRHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFG 1629
            VRH+LACVSQPA   ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  G
Sbjct: 424  VRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKG 483

Query: 1628 QQFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT 1449
            QQF PTTLTLDS VTR           SCMDKAGIGTDATMHDHIKKLLDR YATKDANT
Sbjct: 484  QQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT 543

Query: 1448 RFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            RFSPTNLGEALVMGYDDMGYELWKP LR++ME DM  VS+G K K+EVLETCLQQMKACF
Sbjct: 544  RFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKACF 603

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            LDARV + KLLEAM IFF+RSN     E    G+++R C  C+ESDM L++  DG FMVG
Sbjct: 604  LDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDGNFMVG 663

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C+ +PQCRN VWLPG T EA+VTT VC +C PGPV+ I  KFRQ+ IPP +D +HLGCIG
Sbjct: 664  CMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNHLGCIG 723

Query: 908  GCDETLRQLIEICRTGSRN-------TVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQ 750
            GCD+ L+QLI+IC TGSR+       TVP N                     + CIHC+Q
Sbjct: 724  GCDDILKQLIDICGTGSRSQARRAPGTVPSN-----------NIQGSNTRQGNFCIHCQQ 772

Query: 749  TGHSSNDCXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQ 570
             GH+S +C                  + E+++ CN CGT C +RTANT  N+GR+F+SC 
Sbjct: 773  RGHASANCPSRATAFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCP 832

Query: 569  IRECNFFVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVS 390
             + C+FF WEDSINNS+  +   +NSG S    R               G+      FVS
Sbjct: 833  TQGCSFFAWEDSINNSSGNATTGSNSGGSGRRGRGR----GGRGGQSGGGRRNSGTSFVS 888

Query: 389  ATGDPISG-RCYVCGDPSHFANVCPNR 312
            ATG+P+SG RC+ CGDPSHFANVCPNR
Sbjct: 889  ATGEPVSGIRCFSCGDPSHFANVCPNR 915


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score = 1273 bits (3295), Expect = 0.0
 Identities = 626/920 (68%), Positives = 713/920 (77%), Gaps = 2/920 (0%)
 Frame = -3

Query: 3065 GGRTIRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTS 2886
            GG  IRVLNVAEKPSVAKAV+ ILSR    + R GRS+YN+IFEF Y+I G+ C+MLVTS
Sbjct: 5    GGGAIRVLNVAEKPSVAKAVAEILSRRSA-QSRAGRSQYNRIFEFNYAINGRACHMLVTS 63

Query: 2885 VTGHLMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLD 2706
            VTGHLMELEF+DR+R+WHSCDPA+L+HA VRKSVPQDK  IK+TLEEE+R CQWLVLWLD
Sbjct: 64   VTGHLMELEFDDRFRRWHSCDPAELFHAPVRKSVPQDKQAIKQTLEEEARRCQWLVLWLD 123

Query: 2705 CDREGENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIRPNQLFADAVDARQ 2526
            CDREGENIA+EV++VC+  N +LNIWRARFSALIDREIHESVQ+L RPN+LFADAVDARQ
Sbjct: 124  CDREGENIAYEVIDVCTRANSHLNIWRARFSALIDREIHESVQHLGRPNKLFADAVDARQ 183

Query: 2525 EIDLRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEP 2346
            EIDLRIGASFTRFQTMLLKDAFVID TGD+RSLVLSYGPCQFPTLGF+VER+WEIQAHEP
Sbjct: 184  EIDLRIGASFTRFQTMLLKDAFVIDVTGDERSLVLSYGPCQFPTLGFIVERFWEIQAHEP 243

Query: 2345 EEFWMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPP 2166
            EEFW INC+HTS+EG A+F W+RGH+FDY+CA+ IYEMCV +P ATV  VR+Q+KLKYPP
Sbjct: 244  EEFWTINCTHTSDEGTASFGWIRGHLFDYSCAISIYEMCVSEPMATVQNVRNQEKLKYPP 303

Query: 2165 HPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQ 1986
            +PL+T+EL+KRASRYFRMSSEHTMKVAE+LYQAGFISYPRTETD+FS  TDLHAIV+EQ 
Sbjct: 304  YPLSTVELQKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIVREQV 363

Query: 1985 GHPEWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVV 1806
             HP WG+YAQ+LL+P   LWRNPS+GGHDDKAHPPIHPTKFS GE  WS DH RLYE VV
Sbjct: 364  NHPVWGAYAQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHTRLYEFVV 423

Query: 1805 RHFLACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQ 1626
            RHFLAC SQPAVG ETTVEIDIAGE F+ASGRVI+AKNYLDVYRF+SWGG+++P Y  GQ
Sbjct: 424  RHFLACCSQPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLPTYNIGQ 483

Query: 1625 QFTPTTLTLDSGVTRXXXXXXXXXXXSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTR 1446
            QF PTTLTLDSGVTR           SCMDKAGIGTDATMHDHIKKLLDR YATKD NTR
Sbjct: 484  QFVPTTLTLDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDENTR 543

Query: 1445 FSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACFL 1266
            FSPTNLGEALVMGYD+MGYELWKPYLRSMME DMK+VS+GTK KSEVLE+CLQQMKACFL
Sbjct: 544  FSPTNLGEALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSKSEVLESCLQQMKACFL 603

Query: 1265 DARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGC 1086
            DARV + KLL+AM  FF RSNRP  + Q+ V ++VRPCGAC+ S+M LK+R  G+FMVGC
Sbjct: 604  DARVKKAKLLDAMGTFFARSNRPINETQNPV-EVVRPCGACNGSEMLLKRRASGEFMVGC 662

Query: 1085 LGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGG 906
              +PQCRNVVWLPGS SEAAVT QVC  C PGPV+ IQ KFR+ +IPPN+D DHLGC+GG
Sbjct: 663  RSYPQCRNVVWLPGSLSEAAVTNQVCPICAPGPVYKIQFKFRRRDIPPNFDVDHLGCVGG 722

Query: 905  CDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSNDC 726
            CD+ L+ L+EI R GSR+     A                          R     +ND 
Sbjct: 723  CDDILKDLMEISRFGSRSQAATPARGPTPNGVGQGTPRQDLHTIF-----RPASQLNNDN 777

Query: 725  XXXXXXXXXXXXXXXXXXSGETS--IPCNICGTPCSVRTANTANNKGRKFYSCQIRECNF 552
                              +   +  + C  CG  C  R ANT  N+GR+FY CQ   C F
Sbjct: 778  PSVMHSQGFRSTHTQNPSNASDAGQVLCTSCGALCISRIANTEANRGRRFYKCQDPGCGF 837

Query: 551  FVWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPI 372
            F WED ++N T        S R AS + S              G+N    MFVSATGD +
Sbjct: 838  FKWEDEVDNGTGRGRRGRGSSRQASASAS---AGRRGGGRRGRGRNADGGMFVSATGDTV 894

Query: 371  SGRCYVCGDPSHFANVCPNR 312
             G C+ CGDPSHFAN CPNR
Sbjct: 895  LGCCFNCGDPSHFANACPNR 914


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score = 1271 bits (3290), Expect = 0.0
 Identities = 627/921 (68%), Positives = 716/921 (77%), Gaps = 6/921 (0%)
 Frame = -3

Query: 3053 IRVLNVAEKPSVAKAVSGILSRNQGLRVREGRSRYNKIFEFEYSIRGQRCNMLVTSVTGH 2874
            + VLNVAEKP VA+ V+ ILSRNQ +R+REGRSRYNKIFEF Y+IRGQ C+M+ TSVTGH
Sbjct: 1    MNVLNVAEKPMVARTVATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHMIFTSVTGH 60

Query: 2873 LMELEFEDRYRKWHSCDPADLYHATVRKSVPQDKLEIKRTLEEESRWCQWLVLWLDCDRE 2694
            LMELEF+DRYRKWHSCDPADL+ A V K VP+DK +IKRTLEEE+R CQWL+LWLDCD E
Sbjct: 61   LMELEFDDRYRKWHSCDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCDVE 120

Query: 2693 GENIAFEVVEVCSAVNPNLNIWRARFSALIDREIHESVQNLIR-PNQLFADAVDARQEID 2517
            GENIA+EV++VC+AVNP+L I RA FS LIDR+IH + QN +R P++  ADAVD RQEID
Sbjct: 121  GENIAYEVIDVCTAVNPHLTIKRAWFSTLIDRDIHNAAQNDLRDPDKRVADAVDVRQEID 180

Query: 2516 LRIGASFTRFQTMLLKDAFVIDFTGDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEF 2337
            LRIGASFTRFQTML+KDAF+ID   DDR+ VLSYGPCQFPTLGFVVER+WEIQAHEPEEF
Sbjct: 181  LRIGASFTRFQTMLMKDAFIIDTATDDRNRVLSYGPCQFPTLGFVVERFWEIQAHEPEEF 240

Query: 2336 WMINCSHTSEEGIATFNWMRGHMFDYTCAVIIYEMCVQDPTATVTKVRDQQKLKYPPHPL 2157
            W I CSH S+EG A F+WMRG +FDYTCAVIIYEMCV++PTATVT +R Q+K KYPP PL
Sbjct: 241  WSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCVEEPTATVTNIRQQEKPKYPPFPL 300

Query: 2156 NTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSARTDLHAIVQEQQGHP 1977
            NTIEL+KRASRYFRMSS+HTMKVAE+LYQAGFISYPRTETDSFS  TDLH IVQEQQGHP
Sbjct: 301  NTIELQKRASRYFRMSSDHTMKVAEELYQAGFISYPRTETDSFSPGTDLHTIVQEQQGHP 360

Query: 1976 EWGSYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTKFSTGESGWSQDHCRLYELVVRHF 1797
            EWG YAQ+L+DP  GLWRNP  GGHDDKAHPPI+PTKFSTGESGWSQDH +LYELVVRHF
Sbjct: 361  EWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHF 420

Query: 1796 LACVSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFT 1617
            LACVS+PA+G ETTVEI+IAGELFSA GRVI+ KNYLDVYR+ESWGGSMIP Y  GQQF 
Sbjct: 421  LACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFN 480

Query: 1616 PTTLTLDSGVTRXXXXXXXXXXXSCMDK--AGIGTDATMHDHIKKLLDRFYATKDANTRF 1443
            PT LTL+SGVTR           S MD+  A IGTDATM DHIKK+LDR YATKD++TRF
Sbjct: 481  PTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRF 540

Query: 1442 SPTNLGEALVMGYD--DMGYELWKPYLRSMMECDMKAVSMGTKRKSEVLETCLQQMKACF 1269
            +PTNLGEALV+GYD  DM Y+LWKP LRS ME  M  V  G K K+EVL T LQ+M+ACF
Sbjct: 541  TPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACF 600

Query: 1268 LDARVNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVG 1089
            L+AR+N+VKLLEAMAIFF+RS R   DE    G++VR CG C ESDM L++  DG FMVG
Sbjct: 601  LEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVG 660

Query: 1088 CLGFPQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIG 909
            C+G+PQCRN VWLPGS SEA VTT  CN CTPGPV++IQ KFR++EIPPNY  +HLGCIG
Sbjct: 661  CMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIG 720

Query: 908  GCDETLRQLIEICRTGSRNTVPVNAAXXXXXXXXXXXXXXXXXXXSACIHCRQTGHSSND 729
            GCDE L QL EIC  G     P   A                    AC++CR+TGHSS D
Sbjct: 721  GCDEILAQLTEICGRG-----PRMPARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTD 775

Query: 728  CXXXXXXXXXXXXXXXXXXSGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 549
            C                  +GE S+ C+ CGTPC +RTANT NN+GRKFYSCQ +ECNFF
Sbjct: 776  C---PLRYGNVQHHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFF 832

Query: 548  VWEDSINNSTAGSAPHANSGRSASNTRSNPXXXXXXXXXXXXGQNTIDAMFVSATGDPIS 369
            VWEDS+N  T G +   ++   A N R               G  T +  F+SATGDPIS
Sbjct: 833  VWEDSLNAGTGGRSVTRSNSIPALNPRQT-GGRGSRGRGGQYGSRTANTTFMSATGDPIS 891

Query: 368  G-RCYVCGDPSHFANVCPNRG 309
            G RCY CGDPSHFANVCP+RG
Sbjct: 892  GRRCYTCGDPSHFANVCPHRG 912