BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00025278
         (345 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...    67   2e-09
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr...    64   3e-08
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...    64   3e-08
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4...    62   8e-08
gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Mor...    61   1e-07
ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana] ...    58   2e-06
ref|XP_004239581.1| PREDICTED: uncharacterized protein LOC101251...    57   3e-06
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...    56   6e-06
ref|XP_002873399.1| DNA-directed RNA polymerase III RPC4 family ...    55   8e-06

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 35/62 (56%), Positives = 42/62 (67%)
 Frame = -2

Query: 188 TRKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRINEGSGRGKLKADKKSAPVQ 9
           TRKVRFAPK P R+  K   PK+E+ ED +A Q   L+R  NE S +GK KA+KK AP Q
Sbjct: 14  TRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEKKLAPTQ 72

Query: 8   VA 3
           VA
Sbjct: 73  VA 74


>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
           gi|568853572|ref|XP_006480425.1| PREDICTED:
           uncharacterized protein LOC102622464 [Citrus sinensis]
           gi|557530644|gb|ESR41827.1| hypothetical protein
           CICLE_v10012311mg [Citrus clementina]
          Length = 303

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 8/76 (10%)
 Frame = -2

Query: 206 MEPSTP------TRKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRI--NEGSG 51
           MEP  P      TRK+++APK P R+  K AE KTE+VE+A+A Q  +LL+R   N+G+ 
Sbjct: 1   MEPEPPKSTSNATRKIKYAPKAPPRRVPK-AEVKTEMVENADAAQAMDLLQRFNANQGAL 59

Query: 50  RGKLKADKKSAPVQVA 3
           +G+ K +KK AP Q+A
Sbjct: 60  KGRPKVEKKVAPSQIA 75


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
           gi|449500539|ref|XP_004161125.1| PREDICTED:
           uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%)
 Frame = -2

Query: 185 RKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRINEGSGRGKLKADKKSAPVQV 6
           RK++FAPK P R+  KP E K E+ EDA+A Q ++LL+R NE + R K +  +K+AP QV
Sbjct: 14  RKLKFAPKAPVRRIPKP-EVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQV 72

Query: 5   A 3
           A
Sbjct: 73  A 73


>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
           cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
           polymerase III subunit RPC4, putative [Theobroma cacao]
          Length = 294

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = -2

Query: 185 RKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRINEGSGRGKLKADKKSAPVQV 6
           RK+RFAPK P R+A K  E KTE+VED +A Q ++LL+R+N+ S + K K +KK A  QV
Sbjct: 12  RKMRFAPKAPPRQAPK-LEVKTEVVEDTDAVQARDLLQRLNQTSAKTKPKVEKKVASSQV 70

Query: 5   A 3
           A
Sbjct: 71  A 71


>gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
          Length = 328

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/67 (53%), Positives = 42/67 (62%)
 Frame = -2

Query: 203 EPSTPTRKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRINEGSGRGKLKADKK 24
           EP  P RK RF PK P  +  K AE K E+VE+ +A Q + LLRR NEGS R K K +KK
Sbjct: 9   EPDAP-RKRRFMPKAPPSRVPK-AEVKAEVVEETDADQARVLLRRFNEGSTRAKPKVEKK 66

Query: 23  SAPVQVA 3
            A  QVA
Sbjct: 67  VAAAQVA 73


>ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana]
           gi|9955525|emb|CAC05464.1| putative protein [Arabidopsis
           thaliana] gi|332004001|gb|AED91384.1| RNA polymerase III
           RPC4 [Arabidopsis thaliana]
          Length = 272

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -2

Query: 206 MEPSTPTRKVRFAPKIPSRKATKPAEPKTELVED-AEATQTKNLLRRINEGSGRGKLKAD 30
           ME   P RK++FAPK P ++  KP E K E+VED + + Q   LLRR+NE S R K KAD
Sbjct: 1   MEQKPPVRKMKFAPKAPPKRVPKP-EVKPEVVEDNSNSAQASELLRRVNERSLR-KPKAD 58

Query: 29  KKSAPVQVA 3
           KK    QVA
Sbjct: 59  KKVPASQVA 67


>ref|XP_004239581.1| PREDICTED: uncharacterized protein LOC101251476 [Solanum
           lycopersicum]
          Length = 103

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = -2

Query: 185 RKVRFAPKIPSRKATKPAEPKTELVE-DAEATQTKNLLRRINEGSGRGKLKADKKSAPVQ 9
           RKVRFAPK P R+A K   PKTE VE D +A + + L++R NE S + K K +KK  P Q
Sbjct: 13  RKVRFAPKGPPRRAQKTVLPKTENVEADVDAAKAEELMQRFNEASAKIKHKVEKK-GPTQ 71

Query: 8   VA 3
           VA
Sbjct: 72  VA 73


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
           gi|223544779|gb|EEF46295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 286

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = -2

Query: 200 PSTPTRKVRFAPKIPSRKATKPAEPKTELVEDAEATQTKNLLRRINEGSGRGKLKADKKS 21
           P  P RK+++ PK P R+  KP E K+E  ED +ATQ   L+++  E S R K KA+KK 
Sbjct: 6   PQDPPRKLKYMPKAPPRRPPKP-EVKSEKAEDEDATQAMKLMKQFQERSMRAKPKAEKKV 64

Query: 20  APVQVA 3
              Q+A
Sbjct: 65  QASQIA 70


>ref|XP_002873399.1| DNA-directed RNA polymerase III RPC4 family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297319236|gb|EFH49658.1|
           DNA-directed RNA polymerase III RPC4 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 271

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = -2

Query: 206 MEPSTPTRKVRFAPKIPSRKATKPAEPKTELVE-DAEATQTKNLLRRINEGSGRGKLKAD 30
           ME   P RK++FAPK P ++  KP E K E+VE D+ + Q   LLRR+NE S R K KAD
Sbjct: 1   MEQKPPVRKMKFAPKAPPKRVPKP-EVKPEVVENDSNSAQALELLRRVNERSLR-KPKAD 58

Query: 29  KKSAPVQVA 3
           KK    +VA
Sbjct: 59  KKVPASRVA 67