BLASTX nr result
ID: Akebia23_contig00025167
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00025167
(787 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 258 2e-66
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 258 2e-66
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 252 9e-65
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor... 243 8e-62
ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III s... 240 4e-61
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s... 230 4e-58
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s... 228 3e-57
ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phas... 225 1e-56
gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus... 223 5e-56
ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prun... 220 4e-55
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s... 220 4e-55
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 220 5e-55
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s... 216 6e-54
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s... 214 3e-53
ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Caps... 213 5e-53
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp.... 212 1e-52
ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutr... 211 3e-52
ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containin... 210 5e-52
ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III s... 209 7e-52
ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, part... 209 7e-52
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 258 bits (659), Expect = 2e-66
Identities = 124/192 (64%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LSLIEHT +EAIKGEL+SLFLDK+IANLGLCISVYDI+SIDGGF+F
Sbjct: 1 MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGASTYTV FRLVMFRPFVGEI++ K++ SDANGLRLSLGFF DIY+PVHL+PNP
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120
Query: 370 GDDGK------WTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
+ + W W++Q IRF+V S+ YPPIP+EQ K++KPF+PMVI S
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGS 180
Query: 532 IDYDGLGPVSWW 567
+DYDGLGPVSWW
Sbjct: 181 LDYDGLGPVSWW 192
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 258 bits (658), Expect = 2e-66
Identities = 123/192 (64%), Positives = 147/192 (76%), Gaps = 6/192 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MFFLSLIEHT +EAIKGEL+SLFLDK++ANLGLCISVYDI+SIDGGF+F
Sbjct: 1 MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGASTYTV FRLVMFRPFVGEI++ K++ SDANGL+LSLGFF DIY+PVHL+PNP
Sbjct: 61 PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120
Query: 370 GDDGK------WTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D + W W++Q IRF+V S+ YPPIP+EQ K++KPF+PM+I S
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGS 180
Query: 532 IDYDGLGPVSWW 567
+DYDGLGPVSWW
Sbjct: 181 LDYDGLGPVSWW 192
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 252 bits (644), Expect = 9e-65
Identities = 126/200 (63%), Positives = 148/200 (74%), Gaps = 14/200 (7%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LSLIEHT DEAIK EL++LFLDK+IANLGLCISVYDI+SI GGFI+
Sbjct: 1 MFYLSLIEHTLRLPPHLLNLPLDEAIKIELEALFLDKVIANLGLCISVYDIRSIKGGFIY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGASTYTV FRL++FRPFVGEI+ K++ SDANGLRLSLGFF DIY+PVHLLP PS+F
Sbjct: 61 PGDGASTYTVEFRLIVFRPFVGEIIVAKLKESDANGLRLSLGFFDDIYIPVHLLPIPSRF 120
Query: 370 GDD------GKWTWEF--------QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPF 507
D G+W W+F + I+FRVHS+ YP IPLEQ +++KPF
Sbjct: 121 ESDPNNRNQGRWIWDFGEAEEAQSEEPRFVIDGMDQIKFRVHSVIYPSIPLEQPENSKPF 180
Query: 508 SPMVITASIDYDGLGPVSWW 567
+PMVIT SIDYDGLGPVSWW
Sbjct: 181 APMVITGSIDYDGLGPVSWW 200
>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
Length = 200
Score = 243 bits (619), Expect = 8e-62
Identities = 118/192 (61%), Positives = 141/192 (73%), Gaps = 6/192 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT EAIK EL+ LFLDK+IANLGLCISVYDI SI+GGFIF
Sbjct: 1 MFYLSRIEHTLRVPPDILSRPLTEAIKVELEKLFLDKVIANLGLCISVYDIISIEGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA+TYT F ++MFRPFVGEI+S KV+ SDANGLRL+LGFF+DIY+P + LP+PS+
Sbjct: 61 PGDGAATYTAVFTMIMFRPFVGEIISAKVKESDANGLRLTLGFFEDIYIPANFLPDPSRP 120
Query: 370 GDDGK------WTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D + W WEF IRF+VHS+ YPPIP+EQ K++KPF+PMVIT S
Sbjct: 121 EPDPRKRDRVTWIWEFGEQKYVIDGEDEIRFQVHSVNYPPIPVEQPKESKPFAPMVITGS 180
Query: 532 IDYDGLGPVSWW 567
+D DGLGPVSWW
Sbjct: 181 LDCDGLGPVSWW 192
>ref|XP_006479590.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Citrus sinensis]
gi|568851835|ref|XP_006479591.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Citrus
sinensis]
Length = 192
Score = 240 bits (613), Expect = 4e-61
Identities = 117/192 (60%), Positives = 143/192 (74%), Gaps = 6/192 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT +EAIK EL+++FLDK+IANLGLCIS+YDIK I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PG+GAST+TV FRLV+FRPFVGEI++ K++ SDANGLRLSLGFF+DIYVP HLLP+PS+
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D KW WEF I+FRV S+ YP IP+EQ + +KPF+PMVI S
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGSKPFAPMVINGS 180
Query: 532 IDYDGLGPVSWW 567
IDYDGLGPVSWW
Sbjct: 181 IDYDGLGPVSWW 192
>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum lycopersicum]
Length = 193
Score = 230 bits (587), Expect = 4e-58
Identities = 109/193 (56%), Positives = 141/193 (73%), Gaps = 6/193 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS++EHT +EAIKGEL+ LF+DK+IANLGL IS+YDI+S+D GFI+
Sbjct: 1 MFYLSVLEHTLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLGISIYDIRSVDDGFIY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
P +GASTY V FRLV+FRPFVGE++S K++ S+A GLRLSLGFF DIYVP LLP+PS+
Sbjct: 61 PSEGASTYKVKFRLVVFRPFVGEVISAKLKESNAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D +W W+F IRF+VH++ YP +PLEQ+KD+KPF+PMVI S
Sbjct: 121 EPDPENKNQVRWIWKFDELDYPIDGIDEIRFQVHNVSYPSMPLEQDKDSKPFAPMVIKGS 180
Query: 532 IDYDGLGPVSWWV 570
+D DGLGP+SWW+
Sbjct: 181 LDADGLGPISWWI 193
>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum tuberosum]
Length = 193
Score = 228 bits (580), Expect = 3e-57
Identities = 109/193 (56%), Positives = 138/193 (71%), Gaps = 6/193 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEH +EAIKGEL+ LF+DK+IANLGL IS+YDI+SID GFI+
Sbjct: 1 MFYLSEIEHKLRLPPHLLNLPLNEAIKGELEGLFVDKVIANLGLIISIYDIRSIDDGFIY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
P +GASTYTV FRLV+FRPFVGE+++ K++ S A GLRLSLGFF DIYVP LLP+PS+
Sbjct: 61 PSEGASTYTVKFRLVVFRPFVGEVITAKLKESKAEGLRLSLGFFDDIYVPAPLLPDPSRS 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D +W W+F IRF+VH++ YP +PLEQ+KD+ PF+PMVI S
Sbjct: 121 APDPENKNQVRWIWKFDELDYPIDGVDEIRFQVHNVSYPSMPLEQDKDSNPFAPMVIKGS 180
Query: 532 IDYDGLGPVSWWV 570
+D DGLGP+SWW+
Sbjct: 181 LDADGLGPISWWI 193
>ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
gi|561007160|gb|ESW06109.1| hypothetical protein
PHAVU_010G020200g [Phaseolus vulgaris]
Length = 215
Score = 225 bits (574), Expect = 1e-56
Identities = 109/205 (53%), Positives = 139/205 (67%), Gaps = 19/205 (9%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEH EAI EL+ LFLDK+IAN+GLCISVYDI+SIDGGFIF
Sbjct: 1 MFYLSKIEHKLPLPPSRLVLPIREAIHMELEKLFLDKVIANVGLCISVYDIRSIDGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA TYTV F L+MFRPFVGEI++ ++ +SD++GLRL+LGFF+DIYVP H +P P+ F
Sbjct: 61 PGDGAPTYTVVFNLIMFRPFVGEIITARLISSDSDGLRLTLGFFEDIYVPAHHMPYPNHF 120
Query: 370 GDD-------------------GKWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEK 492
+D G W W+F I+FRV ++ YP IP+EQ K
Sbjct: 121 VEDEQGKRVSSSEESTTNSVRKGVWYWDFNEQEYPIQETDVIKFRVQNVSYPQIPVEQPK 180
Query: 493 DAKPFSPMVITASIDYDGLGPVSWW 567
++KPF+PM++T S+D+DGLGPVSWW
Sbjct: 181 ESKPFAPMLVTGSLDHDGLGPVSWW 205
>gb|EYU46504.1| hypothetical protein MIMGU_mgv1a014157mg [Mimulus guttatus]
Length = 199
Score = 223 bits (569), Expect = 5e-56
Identities = 113/199 (56%), Positives = 137/199 (68%), Gaps = 13/199 (6%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MFFLS +EH+ D+AIKGEL+SLFLD +I LGLCISVYDI+SIDGGFIF
Sbjct: 1 MFFLSELEHSLRLPPHLLNQPLDKAIKGELESLFLDTVIDKLGLCISVYDIRSIDGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PG GASTYTV FRLVMFRPF+GE++S +++ S +GLRLSLGFF DIYV V LLP P+ +
Sbjct: 61 PGHGASTYTVKFRLVMFRPFLGEVISARLKESTTSGLRLSLGFFDDIYVYVPLLPAPNDY 120
Query: 370 GDDGK------WTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQ-------EKDAKPFS 510
D W+W + IRF+VHS+ Y PIP+EQ +KD+KPF+
Sbjct: 121 APDPSRKDGVIWSWNYHADPLTIDWTDEIRFKVHSVNYHPIPVEQGDDDDPEKKDSKPFA 180
Query: 511 PMVITASIDYDGLGPVSWW 567
PMV+ SID DGLGPVSWW
Sbjct: 181 PMVVIGSIDDDGLGPVSWW 199
>ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
gi|462414878|gb|EMJ19615.1| hypothetical protein
PRUPE_ppa011518mg [Prunus persica]
Length = 207
Score = 220 bits (561), Expect = 4e-55
Identities = 111/195 (56%), Positives = 136/195 (69%), Gaps = 8/195 (4%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT ++A++GEL+ LFLDK+IANLGLCISV+ I+SI GFI
Sbjct: 1 MFYLSRIEHTLRLPPHLLSLRLEDAVRGELEKLFLDKVIANLGLCISVHSIQSIKDGFIL 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPS-K 366
P DG T+ V F L+MFRPFVGEI+ K++ S ANGLRLSL FF DIYVPVHLLP PS
Sbjct: 61 PNDGHPTFRVEFTLIMFRPFVGEIIVAKLKESTANGLRLSLEFFDDIYVPVHLLPVPSHS 120
Query: 367 FGDDGK-----WTWEF--QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVIT 525
D GK W W+F I+F+VHS+ +PPIP+EQ +D+KPF+PMV+T
Sbjct: 121 VPDPGKRDRVMWIWKFPDSDEELVIDGIDQIKFQVHSVNFPPIPIEQPEDSKPFAPMVVT 180
Query: 526 ASIDYDGLGPVSWWV 570
SID+DGLGPVSWWV
Sbjct: 181 GSIDFDGLGPVSWWV 195
>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Cucumis sativus] gi|449523449|ref|XP_004168736.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Cucumis sativus]
Length = 226
Score = 220 bits (561), Expect = 4e-55
Identities = 110/208 (52%), Positives = 139/208 (66%), Gaps = 22/208 (10%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT +AIKGEL+ LF+DK++ANLGLCISVYDI+S+DGGFIF
Sbjct: 1 MFYLSRIEHTLRVPPSLLNLPILDAIKGELEKLFIDKVVANLGLCISVYDIRSVDGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
P DGA+TY V F L++FRPF GE++ GKV+ S+ NGLR+SLGFF+DIYVPV L+P+ S+F
Sbjct: 61 PSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISLGFFEDIYVPVELMPSGSEF 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDA----------- 498
D +W W + I+F+VHSI YP I +EQ K++
Sbjct: 121 TPDENNGGRCRWVWIYNEVPFDIYESDEIKFKVHSIEYPAILVEQPKESNSKFPMEEKPK 180
Query: 499 -----KPFSPMVITASIDYDGLGPVSWW 567
KPF+PMVITAS+D DGLGPVSWW
Sbjct: 181 ESINVKPFAPMVITASLDQDGLGPVSWW 208
>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
[Ricinus communis] gi|223539824|gb|EEF41404.1|
DNA-directed RNA polymerase III 25 kD polypeptide,
putative [Ricinus communis]
Length = 194
Score = 220 bits (560), Expect = 5e-55
Identities = 112/196 (57%), Positives = 136/196 (69%), Gaps = 10/196 (5%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT +A+K EL+ +FLDK+IANLGLCISVYD+ IDGGFIF
Sbjct: 1 MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGASTYTV FR+V+FRPFVGEI+ K++ S+ +GLRLSLGFF DIY+P H LP PS
Sbjct: 61 PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120
Query: 370 GDDGK------WTWEF----QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMV 519
D + W WEF I+FRV S++YPP+PLEQ++ KPF+PMV
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLEQQE--KPFAPMV 178
Query: 520 ITASIDYDGLGPVSWW 567
IT SID +GLGPVSWW
Sbjct: 179 ITGSIDDEGLGPVSWW 194
>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
arietinum]
Length = 196
Score = 216 bits (551), Expect = 6e-54
Identities = 107/196 (54%), Positives = 134/196 (68%), Gaps = 10/196 (5%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEH +AI EL+ LFLDK+IANLGLC VYDI SI+GGFIF
Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHTELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA TYTV F L+MFRP +GEI++ K+ +SDA+GLRLSLGFF DIY+P H +PNPS F
Sbjct: 61 PGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120
Query: 370 ----GDDGK---WTWEF---QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMV 519
G K W W++ + I+F+V S+ YPPIP+EQ K++KPF+PM+
Sbjct: 121 DPIPGKSNKSVVWFWDYKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPML 180
Query: 520 ITASIDYDGLGPVSWW 567
+ S+D DGLGPVSWW
Sbjct: 181 VYGSLDQDGLGPVSWW 196
>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Cicer arietinum]
gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Cicer
arietinum]
Length = 196
Score = 214 bits (545), Expect = 3e-53
Identities = 107/196 (54%), Positives = 133/196 (67%), Gaps = 10/196 (5%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEH +AI EL+ LFLDK+IANLGLC VYDI SI+GGFIF
Sbjct: 1 MFYLSRIEHKLRLPPSLLSLPIRDAIHMELEKLFLDKVIANLGLCTCVYDIISIEGGFIF 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
GDGA TYTV F L+MFRP +GEI++ K+ +SDA+GLRLSLGFF DIY+P H +PNPS F
Sbjct: 61 AGDGAPTYTVVFNLIMFRPIMGEIITAKLHSSDADGLRLSLGFFDDIYIPTHHMPNPSHF 120
Query: 370 ----GDDGK---WTWEF---QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMV 519
G K W W+F + I+F+V S+ YPPIP+EQ K++KPF+PM+
Sbjct: 121 DPMPGKSNKSVVWFWDFKKEEGLSYPIDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPML 180
Query: 520 ITASIDYDGLGPVSWW 567
+ S+D DGLGPVSWW
Sbjct: 181 VYGSLDQDGLGPVSWW 196
>ref|XP_006305915.1| hypothetical protein CARUB_v10011131mg [Capsella rubella]
gi|482574626|gb|EOA38813.1| hypothetical protein
CARUB_v10011131mg [Capsella rubella]
Length = 199
Score = 213 bits (543), Expect = 5e-53
Identities = 100/192 (52%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS +EH+ ++AIK L ++FLDK++ +LGLC+SVYDIKSI+GG +
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLVDLGLCVSVYDIKSIEGGIVL 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA+TY V FR+V+FRPFVGE+++ K + SD NGLRL+LGFF+DIYVPV L+P P++
Sbjct: 61 PGDGAATYKVVFRIVVFRPFVGEVIAAKFKESDTNGLRLTLGFFEDIYVPVPLIPTPNRC 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVITAS 531
D +W W F+ I+FRV I YP +P+E+ +DAKPF+PMVIT +
Sbjct: 121 EPDPYNRKQMRWVWVFEGQEYIIDDSCQIKFRVEGISYPSVPIERAEDAKPFAPMVITGN 180
Query: 532 IDYDGLGPVSWW 567
ID DGLG VSWW
Sbjct: 181 IDDDGLGLVSWW 192
>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335460|gb|EFH65877.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 212 bits (540), Expect = 1e-52
Identities = 101/194 (52%), Positives = 135/194 (69%), Gaps = 8/194 (4%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS +EH+ ++AIK L ++FLDK++A+LGLC+SVYDIKSI+GGF+
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA+TY V FR+V+FRPFVGE+++ K + SD+NGLRL+LGFF DIYVP L+P P++
Sbjct: 61 PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120
Query: 370 GDDGK------WTWEF--QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVIT 525
D W WE+ I+FRV SI YP +P E+ +DAKPF+PMV+T
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180
Query: 526 ASIDYDGLGPVSWW 567
++D DGLGPVSWW
Sbjct: 181 GNMDEDGLGPVSWW 194
>ref|XP_006396961.1| hypothetical protein EUTSA_v10028967mg [Eutrema salsugineum]
gi|557097978|gb|ESQ38414.1| hypothetical protein
EUTSA_v10028967mg [Eutrema salsugineum]
Length = 204
Score = 211 bits (536), Expect = 3e-52
Identities = 101/194 (52%), Positives = 135/194 (69%), Gaps = 8/194 (4%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF LS +EHT ++AIK L +LFLDK++A+LGLC+S+YDI+S++GGF+
Sbjct: 1 MFTLSELEHTLRVPPHLLNHPLEDAIKSVLQNLFLDKVLADLGLCVSIYDIRSVEGGFVL 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA+TY V FR+V+FRPFV E+++ K + SDANGLRL+LGFF+DIYVP L+P P++
Sbjct: 61 PGDGAATYKVRFRMVVFRPFVTEVIAAKFKESDANGLRLTLGFFEDIYVPAPLIPTPNRC 120
Query: 370 GDDG------KWTWEF--QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVIT 525
D +W WEF I+FRV SI YP +P+E+ + +KPF+PMVIT
Sbjct: 121 EPDPYNRNQMRWVWEFGEPKEDYIIDDSCQIKFRVESISYPTVPIERTEGSKPFAPMVIT 180
Query: 526 ASIDYDGLGPVSWW 567
+ID DGLGPVSWW
Sbjct: 181 GNIDDDGLGPVSWW 194
>ref|NP_172164.1| RNA polymerase Rpb7 N-terminal domain-containing protein
[Arabidopsis thaliana]
gi|7523702|gb|AAF63141.1|AC011001_11 hypothetical
protein [Arabidopsis thaliana]
gi|17529108|gb|AAL38764.1| putative RNA polymerase
[Arabidopsis thaliana] gi|23296904|gb|AAN13199.1|
putative RNA polymerase [Arabidopsis thaliana]
gi|332189917|gb|AEE28038.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Arabidopsis
thaliana]
Length = 204
Score = 210 bits (534), Expect = 5e-52
Identities = 99/194 (51%), Positives = 134/194 (69%), Gaps = 8/194 (4%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS +EH+ ++AIK L ++FLDK++A+LGLC+S+YDIKS++GGF+
Sbjct: 1 MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PGDGA+TY V R+V+FRPFVGE+++ K + SDANGLRL+LGFF DIYVP L+P P++
Sbjct: 61 PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120
Query: 370 GDDGK------WTWEF--QXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVIT 525
D W WE+ I+FRV SI YP +P E+ +DAKPF+PMV+T
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVVT 180
Query: 526 ASIDYDGLGPVSWW 567
++D DGLGPVSWW
Sbjct: 181 GNMDDDGLGPVSWW 194
>ref|XP_006479592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X3 [Citrus sinensis]
Length = 187
Score = 209 bits (533), Expect = 7e-52
Identities = 104/177 (58%), Positives = 130/177 (73%), Gaps = 6/177 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT +EAIK EL+++FLDK+IANLGLCIS+YDIK I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PG+GAST+TV FRLV+FRPFVGEI++ K++ SDANGLRLSLGFF+DIYVP HLLP+PS+
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVI 522
D KW WEF I+FRV S+ YP IP+EQ + +KPF+PMVI
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGSKPFAPMVI 177
>ref|XP_006443913.1| hypothetical protein CICLE_v10023915mg, partial [Citrus clementina]
gi|557546175|gb|ESR57153.1| hypothetical protein
CICLE_v10023915mg, partial [Citrus clementina]
Length = 178
Score = 209 bits (533), Expect = 7e-52
Identities = 104/177 (58%), Positives = 130/177 (73%), Gaps = 6/177 (3%)
Frame = +1
Query: 10 MFFLSLIEHTXXXXXXXXXXXXDEAIKGELDSLFLDKIIANLGLCISVYDIKSIDGGFIF 189
MF+LS IEHT +EAIK EL+++FLDK+IANLGLCIS+YDIK I+GGF++
Sbjct: 1 MFYLSKIEHTLRLPPHLLRLPLNEAIKLELENVFLDKVIANLGLCISIYDIKEIEGGFVY 60
Query: 190 PGDGASTYTVAFRLVMFRPFVGEILSGKVETSDANGLRLSLGFFKDIYVPVHLLPNPSKF 369
PG+GAST+TV FRLV+FRPFVGEI++ K++ SDANGLRLSLGFF+DIYVP HLLP+PS+
Sbjct: 61 PGEGASTHTVKFRLVVFRPFVGEIIAAKLKESDANGLRLSLGFFEDIYVPSHLLPSPSRS 120
Query: 370 GDDG------KWTWEFQXXXXXXXXXXXIRFRVHSIRYPPIPLEQEKDAKPFSPMVI 522
D KW WEF I+FRV S+ YP IP+EQ + +KPF+PMVI
Sbjct: 121 EPDPYGRYEVKWIWEFGDTKYVIDGLDEIKFRVLSVNYPSIPIEQAEGSKPFAPMVI 177