BLASTX nr result

ID: Akebia23_contig00024202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00024202
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5...   109   5e-22
ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4...   109   5e-22
ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3...   109   5e-22
ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1...   109   5e-22
ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatul...   109   5e-22
dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thalia...   108   1e-21
ref|XP_006407578.1| hypothetical protein EUTSA_v10019985mg [Eutr...   108   1e-21
ref|XP_006299607.1| hypothetical protein CARUB_v10015786mg [Caps...   108   1e-21
ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana] gi|313...   108   1e-21
ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2...   107   1e-21
ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1...   107   1e-21
ref|XP_007143735.1| hypothetical protein PHAVU_007G097100g [Phas...   107   1e-21
gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidops...   107   2e-21
ref|XP_006361672.1| PREDICTED: pumilio homolog 4-like [Solanum t...   107   2e-21
ref|XP_004250064.1| PREDICTED: pumilio homolog 3-like [Solanum l...   107   2e-21
ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3...   106   3e-21
ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1...   106   3e-21
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera...   106   3e-21
ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arab...   106   4e-21
ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prun...   105   5e-21

>ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5 [Cicer arietinum]
          Length = 981

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 918  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 975


>ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4 [Cicer arietinum]
          Length = 982

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 919  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 976


>ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3 [Cicer arietinum]
          Length = 993

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 930  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 987


>ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1 [Cicer arietinum]
            gi|502118392|ref|XP_004496244.1| PREDICTED: pumilio
            homolog 4-like isoform X2 [Cicer arietinum]
          Length = 994

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 931  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 988


>ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
            gi|355480910|gb|AES62113.1| 60S ribosomal protein L4
            [Medicago truncatula]
          Length = 1176

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 923  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 980


>dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
           gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis
           thaliana]
          Length = 330

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -3

Query: 271 MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
           MKDP+GNYVVQKVLETCD+QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTGER
Sbjct: 259 MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGER 316


>ref|XP_006407578.1| hypothetical protein EUTSA_v10019985mg [Eutrema salsugineum]
            gi|557108724|gb|ESQ49031.1| hypothetical protein
            EUTSA_v10019985mg [Eutrema salsugineum]
          Length = 999

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTGER
Sbjct: 924  MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGER 981


>ref|XP_006299607.1| hypothetical protein CARUB_v10015786mg [Capsella rubella]
            gi|482568316|gb|EOA32505.1| hypothetical protein
            CARUB_v10015786mg [Capsella rubella]
          Length = 1002

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTGER
Sbjct: 931  MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGER 988


>ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
            gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio
            homolog 4; Short=APUM-4; Short=AtPUM4
            gi|332641375|gb|AEE74896.1| protein pumilio 4
            [Arabidopsis thaliana]
          Length = 1003

 Score =  108 bits (269), Expect = 1e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTGER
Sbjct: 932  MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGER 989


>ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2 [Glycine max]
          Length = 983

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD++S ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 920  MKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 977


>ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
          Length = 984

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD++S ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 921  MKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 978


>ref|XP_007143735.1| hypothetical protein PHAVU_007G097100g [Phaseolus vulgaris]
            gi|561016925|gb|ESW15729.1| hypothetical protein
            PHAVU_007G097100g [Phaseolus vulgaris]
          Length = 928

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/58 (87%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD++S ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGER
Sbjct: 865  MKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 922


>gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
          Length = 1031

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/59 (86%), Positives = 55/59 (93%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGERH 95
            MKDP+GNYVVQKVLETCD+QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTG +H
Sbjct: 932  MKDPFGNYVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGGKH 990


>ref|XP_006361672.1| PREDICTED: pumilio homolog 4-like [Solanum tuberosum]
          Length = 918

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/59 (81%), Positives = 56/59 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGERH 95
            MKDP+GNYVVQKVLETCD+QSRELILSRI++HL AL +YTYGKH+V+RVEKLI TGE+H
Sbjct: 844  MKDPFGNYVVQKVLETCDDQSRELILSRIRIHLTALKKYTYGKHIVSRVEKLIATGEKH 902


>ref|XP_004250064.1| PREDICTED: pumilio homolog 3-like [Solanum lycopersicum]
          Length = 915

 Score =  107 bits (266), Expect = 2e-21
 Identities = 48/59 (81%), Positives = 56/59 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGERH 95
            MKDP+GNYVVQKVLETCD+QSRELILSRI++HL AL +YTYGKH+V+RVEKLI TGE+H
Sbjct: 841  MKDPFGNYVVQKVLETCDDQSRELILSRIRIHLTALKKYTYGKHIVSRVEKLIATGEKH 899


>ref|XP_006606263.1| PREDICTED: pumilio homolog 4-like isoform X3 [Glycine max]
          Length = 982

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD++S ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGE+
Sbjct: 919  MKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGEK 976


>ref|XP_006606261.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
            gi|571568627|ref|XP_006606262.1| PREDICTED: pumilio
            homolog 4-like isoform X2 [Glycine max]
          Length = 983

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/58 (86%), Positives = 56/58 (96%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD++S ELILSRIKVHLNAL RYTYGKH+V+RVEKLITTGE+
Sbjct: 920  MKDPFGNYVVQKVLETCDDRSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGEK 977


>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
            gi|296085990|emb|CBI31431.3| unnamed protein product
            [Vitis vinifera]
          Length = 1026

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKV+ETCD+Q+RELILSRIKVHLN L RYTYGKH+V+RVEKLI TGER
Sbjct: 959  MKDPFGNYVVQKVIETCDDQTRELILSRIKVHLNTLKRYTYGKHIVSRVEKLIATGER 1016


>ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
            lyrata] gi|297330630|gb|EFH61049.1| hypothetical protein
            ARALYDRAFT_897212 [Arabidopsis lyrata subsp. lyrata]
          Length = 1005

 Score =  106 bits (264), Expect = 4e-21
 Identities = 51/58 (87%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETC++QS  LILSRIKVHLNAL RYTYGKH+VARVEKLITTGER
Sbjct: 934  MKDPFGNYVVQKVLETCNDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLITTGER 991


>ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
            gi|462416744|gb|EMJ21481.1| hypothetical protein
            PRUPE_ppa000731mg [Prunus persica]
          Length = 1021

 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = -3

Query: 271  MKDPYGNYVVQKVLETCDNQSRELILSRIKVHLNALTRYTYGKHVVARVEKLITTGER 98
            MKDP+GNYVVQKVLETCD+QS ELILSRIKVHL AL +YTYGKH+V+RVEKLITTGER
Sbjct: 954  MKDPFGNYVVQKVLETCDDQSLELILSRIKVHLTALKKYTYGKHIVSRVEKLITTGER 1011


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