BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00021486
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740556.1| RNA polymerase beta [Platanus occidentalis] gi|...   138   7e-31
ref|YP_740641.1| RNA polymerase beta [Nandina domestica] gi|1221...   136   3e-30
gb|ADD31178.1| RNA polymerase beta' subunit protein [Gunnera man...   134   1e-29
ref|YP_008993683.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993511.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993425.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993339.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993253.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993167.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
ref|YP_008993855.1| RNA polymerase beta (chloroplast) [Magnolia ...   134   1e-29
gb|AEX99078.1| RNA polymerase beta' subunit (chloroplast) [Magno...   134   1e-29
ref|YP_007474527.1| RNA polymerase beta' subunit (chloroplast) [...   134   1e-29
gb|AEX98242.1| RNA polymerase beta' subunit (chloroplast) [Magno...   134   1e-29
ref|YP_006576106.1| RpoC1 (chloroplast) [Magnolia denudata] gi|3...   134   1e-29
ref|YP_004769705.1| RNA polymerase beta [Magnolia kwangsiensis] ...   134   1e-29
ref|YP_008993597.1| RNA polymerase beta (chloroplast) [Magnolia ...   132   4e-29
ref|YP_008592630.1| RNA polymerase beta (chloroplast) [Berberis ...   132   4e-29
gb|ADD31163.1| RNA polymerase beta' subunit protein [Dillenia in...   132   4e-29
ref|YP_001671674.1| RNA polymerase beta' subunit [Carica papaya]...   132   4e-29
gb|ADD31167.1| RNA polymerase beta' subunit protein [Meliosma af...   132   5e-29

>ref|YP_740556.1| RNA polymerase beta [Platanus occidentalis]
           gi|122166044|sp|Q09G55.1|RPOC1_PLAOC RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|114054375|gb|ABI49769.1| RNA polymerase beta
           [Platanus occidentalis]
          Length = 682

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/68 (95%), Positives = 67/68 (98%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 615 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 674

Query: 182 CRACSYST 205
           CRACSY T
Sbjct: 675 CRACSYGT 682


>ref|YP_740641.1| RNA polymerase beta [Nandina domestica]
           gi|122165970|sp|Q09FX0.1|RPOC1_NANDO RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|114054461|gb|ABI49854.1| RNA polymerase beta [Nandina
           domestica]
          Length = 680

 Score =  136 bits (343), Expect = 3e-30
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVRN+KKEILCI IRTTVGHISFYREIEEAIQGF
Sbjct: 613 IASREVPIEVQYESLGTYHEIYGHYLIVRNVKKEILCIDIRTTVGHISFYREIEEAIQGF 672

Query: 182 CRACSYST 205
           CRACSY T
Sbjct: 673 CRACSYGT 680


>gb|ADD31178.1| RNA polymerase beta' subunit protein [Gunnera manicata]
          Length = 680

 Score =  134 bits (338), Expect = 1e-29
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEV YESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 613 IASREVPIEVHYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 672

Query: 182 CRACSY 199
           CRACSY
Sbjct: 673 CRACSY 678


>ref|YP_008993683.1| RNA polymerase beta (chloroplast) [Magnolia salicifolia]
          Length = 685

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>ref|YP_008993511.1| RNA polymerase beta (chloroplast) [Magnolia liliifera]
          Length = 685

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>ref|YP_008993425.1| RNA polymerase beta (chloroplast) [Magnolia kobus]
          Length = 685

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>ref|YP_008993339.1| RNA polymerase beta (chloroplast) [Magnolia pyramidata]
          Length = 673

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 606 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 665

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 666 CRAYSYDT 673


>ref|YP_008993253.1| RNA polymerase beta (chloroplast) [Magnolia dealbata]
          Length = 685

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>ref|YP_008993167.1| RNA polymerase beta (chloroplast) [Magnolia cathcartii]
          Length = 684

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 617 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 676

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 677 CRAYSYDT 684


>ref|YP_008993855.1| RNA polymerase beta (chloroplast) [Magnolia sprengeri]
          Length = 685

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>gb|AEX99078.1| RNA polymerase beta' subunit (chloroplast) [Magnolia grandiflora]
          Length = 681

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 614 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 673

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 674 CRAYSYDT 681


>ref|YP_007474527.1| RNA polymerase beta' subunit (chloroplast) [Magnolia grandiflora]
           gi|372862834|gb|AEX98910.1| RNA polymerase beta' subunit
           (chloroplast) [Magnolia grandiflora]
          Length = 681

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 614 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 673

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 674 CRAYSYDT 681


>gb|AEX98242.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliiflora]
          Length = 681

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 614 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 673

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 674 CRAYSYDT 681


>ref|YP_006576106.1| RpoC1 (chloroplast) [Magnolia denudata] gi|343887530|gb|AEM65209.1|
           RpoC1 [Magnolia denudata] gi|372862242|gb|AEX98325.1|
           RNA polymerase beta' subunit (chloroplast) [Magnolia
           denudata]
          Length = 681

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 614 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 673

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 674 CRAYSYDT 681


>ref|YP_004769705.1| RNA polymerase beta [Magnolia kwangsiensis]
           gi|452848679|ref|YP_007474361.1| RNA polymerase beta'
           subunit (chloroplast) [Magnolia officinalis]
           gi|452848762|ref|YP_007474443.1| RNA polymerase beta'
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|619275727|ref|YP_009026872.1| RNA polymerase
           beta' subunit [Magnolia tripetala]
           gi|302424171|gb|ADL39047.1| RNA polymerase beta
           [Magnolia kwangsiensis] gi|372862412|gb|AEX98493.1| RNA
           polymerase beta' subunit (chloroplast) [Magnolia
           officinalis] gi|372862495|gb|AEX98575.1| RNA polymerase
           beta' subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|372862580|gb|AEX98659.1| RNA polymerase beta'
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|372862665|gb|AEX98743.1| RNA polymerase beta'
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|608608395|gb|AHW51949.1| RNA polymerase beta'
           subunit [Magnolia tripetala]
          Length = 681

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 614 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 673

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 674 CRAYSYDT 681


>ref|YP_008993597.1| RNA polymerase beta (chloroplast) [Magnolia odora]
          Length = 685

 Score =  132 bits (333), Expect = 4e-29
 Identities = 63/68 (92%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTT GHISFYREIEEAIQGF
Sbjct: 618 IASREVPIEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTAGHISFYREIEEAIQGF 677

Query: 182 CRACSYST 205
           CRA SY T
Sbjct: 678 CRAYSYDT 685


>ref|YP_008592630.1| RNA polymerase beta (chloroplast) [Berberis bealei]
           gi|536462671|gb|AGU37036.1| RNA polymerase beta
           (chloroplast) [Berberis bealei]
          Length = 684

 Score =  132 bits (333), Expect = 4e-29
 Identities = 65/68 (95%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCI IRTTVGHISFYREIEEAIQGF
Sbjct: 617 IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIDIRTTVGHISFYREIEEAIQGF 676

Query: 182 CRACSYST 205
            RACSY T
Sbjct: 677 YRACSYDT 684


>gb|ADD31163.1| RNA polymerase beta' subunit protein [Dillenia indica]
          Length = 689

 Score =  132 bits (333), Expect = 4e-29
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASRE PIEV YESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHIS YREIEEAIQGF
Sbjct: 622 IASREAPIEVHYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISLYREIEEAIQGF 681

Query: 182 CRACSYST 205
           CRACSY T
Sbjct: 682 CRACSYGT 689


>ref|YP_001671674.1| RNA polymerase beta' subunit [Carica papaya]
           gi|212288463|sp|B1A926.1|RPOC1_CARPA RecName:
           Full=DNA-directed RNA polymerase subunit beta'; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta'; Short=RNA polymerase subunit beta'
           gi|166344123|gb|ABY86773.1| RNA polymerase beta' chain
           [Carica papaya]
          Length = 680

 Score =  132 bits (333), Expect = 4e-29
 Identities = 62/68 (91%), Positives = 64/68 (94%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASRE PIEV YESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHIS YREIEEAIQGF
Sbjct: 613 IASREAPIEVHYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISLYREIEEAIQGF 672

Query: 182 CRACSYST 205
           CRACSY T
Sbjct: 673 CRACSYDT 680


>gb|ADD31167.1| RNA polymerase beta' subunit protein [Meliosma aff. cuneifolia
           Moore 333]
          Length = 703

 Score =  132 bits (332), Expect = 5e-29
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = +2

Query: 2   IASREVPIEVQYESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGF 181
           IASREVP+EVQYESLGTYHEIYGHYLIVR++KKEILCIYIRTTVGHISFYREIEEAIQGF
Sbjct: 615 IASREVPVEVQYESLGTYHEIYGHYLIVRSVKKEILCIYIRTTVGHISFYREIEEAIQGF 674

Query: 182 CRACSYS 202
            RACSY+
Sbjct: 675 WRACSYT 681