BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00020821
         (1539 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...   290   e-119
ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu...   288   e-119
ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine...   290   e-118
ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601...   291   e-118
ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr...   284   e-117
ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619...   284   e-117
ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun...   281   e-117
gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus...   286   e-116
ref|XP_007009964.1| Pseudouridine synthase family protein isofor...   275   e-114
ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine...   284   e-114
emb|CBI31423.3| unnamed protein product [Vitis vinifera]              271   e-113
gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi...   276   e-113
ref|XP_007009963.1| Pseudouridine synthase family protein isofor...   268   e-112
ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr...   279   e-112
ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine...   284   e-112
ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part...   276   e-112
ref|XP_002879786.1| pseudouridine synthase family protein [Arabi...   275   e-111
ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi...   270   e-110
ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine...   265   e-109
gb|AFK43008.1| unknown [Medicago truncatula]                          252   e-105

>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform
            1 [Vitis vinifera]
          Length = 393

 Score =  290 bits (743), Expect(2) = e-119
 Identities = 159/278 (57%), Positives = 187/278 (67%)
 Frame = -1

Query: 1449 FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270
            FSSFH+S     +P L+ R+FR                  +S +  +   P  ++   Q 
Sbjct: 19   FSSFHLS-----RPSLARRHFRTIPVRSSISPPST-----TSAEFNISFAPKSKNPKPQS 68

Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090
            + +               PWIVR E+G L++QSTPP R+L  M                 
Sbjct: 69   ETL-------------LIPWIVRDENGNLRVQSTPPERYLQDM----AKAKALSAKKKKK 111

Query: 1089 XXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 910
                    +  EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTV
Sbjct: 112  KEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTV 171

Query: 909  NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 730
            NGSVCNTPQTRVD  +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV  LF
Sbjct: 172  NGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLF 231

Query: 729  DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            DDY+KSW+K+NPG+PKPR+FTVGRLDV TTGLII+TND
Sbjct: 232  DDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTND 269



 Score =  167 bits (424), Expect(2) = e-119
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V+KRHL+ ISEGT+IEG+ CTPD VELLP  P+ S+PRLR+VVHEGRNHEVR
Sbjct: 287 YIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 346

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVK+AGL++HSLKR RIGG++LPSDLG GKHVELK GD+K LG
Sbjct: 347 ELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALG 390


>ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa]
            gi|550332354|gb|EEE89362.2| hypothetical protein
            POPTR_0008s03540g [Populus trichocarpa]
          Length = 397

 Score =  288 bits (738), Expect(2) = e-119
 Identities = 146/199 (73%), Positives = 156/199 (78%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAA 1033
            WIVRGEDG LKLQS PP R +HA+                      KA L  EP  SKAA
Sbjct: 75   WIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAA 134

Query: 1032 RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 853
            RRFYN+NFRD  QRLSKVLA+AGVASRRSSE LIFEG+VTVNGSVCNTPQTRVD G+D I
Sbjct: 135  RRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDAI 194

Query: 852  YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 673
            YVNGNR+ KKLPPK+Y+ALNKPKGYICS GEKESKSV  L DDY +SWDKRNPGLPKPRL
Sbjct: 195  YVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRL 254

Query: 672  FTVGRLDVGTTGLIIVTND 616
            FTVGRLDV TTGLIIVTND
Sbjct: 255  FTVGRLDVATTGLIIVTND 273



 Score =  167 bits (423), Expect(2) = e-119
 Identities = 79/104 (75%), Positives = 89/104 (85%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA +DG V KRHL  +SEGT+IEG++C PD VELLPQ PD  RPRLRIVVHEGRNHEVR
Sbjct: 291 YIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVR 350

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LPSDLGLGKH ELK  D+K LG
Sbjct: 351 ELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHAELKQTDLKTLG 394


>ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Solanum lycopersicum]
          Length = 414

 Score =  290 bits (743), Expect(2) = e-118
 Identities = 156/240 (65%), Positives = 170/240 (70%), Gaps = 5/240 (2%)
 Frame = -1

Query: 1320 KQTLKPKP-----NPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVR 1156
            K   KP+P     NP   S  D +                PWIVR E G L LQSTPP R
Sbjct: 56   KPKTKPEPAIPIINPNSDSNSDSV---PNLDAEVGDQLYIPWIVRDEKGNLTLQSTPPAR 112

Query: 1155 FLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVL 976
             LH M                        V TPEPK+SKAARRFYN+NFRDPPQRLSKVL
Sbjct: 113  LLHEM--ANASTGKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVL 170

Query: 975  ASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLAL 796
            A+AGVASRRSSEELIF+GRVTVNGSVC TPQT+VD  +D+IYVNGNR+ KKLP KVYLAL
Sbjct: 171  AAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLAL 230

Query: 795  NKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            NKPKGYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 231  NKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTND 290



 Score =  164 bits (415), Expect(2) = e-118
 Identities = 78/104 (75%), Positives = 89/104 (85%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG VHKRHL+ ISEGT+I+G+ CTPD VELLP  PD SRPRLRIVVHEGRNHEVR
Sbjct: 308 YIATIDGEVHKRHLIAISEGTIIDGVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 367

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL+L +LKR RIGG++LP+DL LGKHVEL   ++K LG
Sbjct: 368 ELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQANLKALG 411


>ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum]
          Length = 413

 Score =  291 bits (746), Expect(2) = e-118
 Identities = 155/236 (65%), Positives = 168/236 (71%), Gaps = 5/236 (2%)
 Frame = -1

Query: 1308 KPKPNPE-----DSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHA 1144
            KPKP PE     +S                      PWIVR E G L LQSTPP R LH 
Sbjct: 56   KPKPKPEPAIPINSDSDSDSNSVPNLEAEIGDQLYIPWIVRDEKGNLTLQSTPPARLLHE 115

Query: 1143 MDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAG 964
            M                        V TPEPK+SKAARRFYN+NFRDPPQRLSKVLA+AG
Sbjct: 116  M--ANASTSKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAG 173

Query: 963  VASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPK 784
            VASRRSSEELIF+GRVTVNGSVC TPQT+VD  +D+IYVNGNR+ KKLP KVYLALNKPK
Sbjct: 174  VASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPK 233

Query: 783  GYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            GYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 234  GYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTND 289



 Score =  161 bits (408), Expect(2) = e-118
 Identities = 77/104 (74%), Positives = 88/104 (84%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG VHKRHL+ ISEGT+I+G+ C PD VELLP  PD SRPRLRIVVHEGRNHEVR
Sbjct: 307 YIATIDGEVHKRHLIAISEGTVIDGVHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 366

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL+L +LKR RIGG++LP+DL LGKHVEL   ++K LG
Sbjct: 367 ELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQANLKALG 410


>ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina]
            gi|557538690|gb|ESR49734.1| hypothetical protein
            CICLE_v10031516mg [Citrus clementina]
          Length = 451

 Score =  284 bits (726), Expect(2) = e-117
 Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 3/202 (1%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXKAVLTPE--PKYS 1042
            WIVRGEDG LKLQ+ PP R +H + D                      A   P+  PK S
Sbjct: 126  WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 185

Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862
            KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD  +
Sbjct: 186  KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 245

Query: 861  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682
            D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+
Sbjct: 246  DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 305

Query: 681  PRLFTVGRLDVGTTGLIIVTND 616
            PRLFTVGRLDV TTGLIIVTND
Sbjct: 306  PRLFTVGRLDVATTGLIIVTND 327



 Score =  168 bits (425), Expect(2) = e-117
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V+KRHL+ ISEGT+IEG  CTPD VELLP  PD  RPR+RIVVHEGRNHEVR
Sbjct: 345 YIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 404

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGLKL+SLKR RIGG++LPSDLG+G HVELK  D+KL+G
Sbjct: 405 ELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMG 448


>ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis]
          Length = 401

 Score =  284 bits (726), Expect(2) = e-117
 Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 3/202 (1%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXKAVLTPE--PKYS 1042
            WIVRGEDG LKLQ+ PP R +H + D                      A   P+  PK S
Sbjct: 76   WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 135

Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862
            KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD  +
Sbjct: 136  KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 195

Query: 861  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682
            D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+
Sbjct: 196  DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 255

Query: 681  PRLFTVGRLDVGTTGLIIVTND 616
            PRLFTVGRLDV TTGLIIVTND
Sbjct: 256  PRLFTVGRLDVATTGLIIVTND 277



 Score =  168 bits (425), Expect(2) = e-117
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V+KRHL+ ISEGT+IEG  CTPD VELLP  PD  RPR+RIVVHEGRNHEVR
Sbjct: 295 YIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 354

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGLKL+SLKR RIGG++LPSDLG+G HVELK  D+KL+G
Sbjct: 355 ELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMG 398


>ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica]
            gi|462414524|gb|EMJ19261.1| hypothetical protein
            PRUPE_ppa006826mg [Prunus persica]
          Length = 393

 Score =  281 bits (718), Expect(2) = e-117
 Identities = 162/282 (57%), Positives = 185/282 (65%), Gaps = 9/282 (3%)
 Frame = -1

Query: 1434 ISPSVFSKPRLSC---RNFRXXXXXXXXXXXXXXXSFG-----SSTKQTLKP-KPNPEDS 1282
            +S S+FSKP LS    R                   F      S  K  LKP    P+  
Sbjct: 12   LSSSLFSKPSLSLIPIRTLPRITCSLSTSSSSSSLEFNITFAPSKPKPKLKPDSAEPDPE 71

Query: 1281 SKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXX 1102
            +   QLI               PWIVRGEDG LKLQS PP RFL A++            
Sbjct: 72   ALAGQLI--------------IPWIVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKEGA 117

Query: 1101 XXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEG 922
                       V T EPKYSKAARRFYN+NFRD  QRLSKVLA+AGVASRRSSE+LIF+G
Sbjct: 118  EKR--------VPTAEPKYSKAARRFYNENFRDASQRLSKVLAAAGVASRRSSEQLIFDG 169

Query: 921  RVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSV 742
            +VTVNGSVCNTPQ+RVD G+D+IYVNGNR+ K+LPPKVYLALNKPKGYIC+SG  E+KSV
Sbjct: 170  KVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLALNKPKGYICASG--ENKSV 227

Query: 741  FSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
             SLF+DY+K+WDKRN G+P+PRLFTVGRLDV TTGLIIVTND
Sbjct: 228  LSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTGLIIVTND 269



 Score =  170 bits (430), Expect(2) = e-117
 Identities = 81/104 (77%), Positives = 91/104 (87%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA I+G V KRHL+ ISEGT+IEG+ CTPD VELLPQ PD SRPRLRIVVHEGRNHEVR
Sbjct: 287 YIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELLPQQPDMSRPRLRIVVHEGRNHEVR 346

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LPSDLGLGKH+ LK GD+  LG
Sbjct: 347 ELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMALKQGDLSALG 390


>gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus]
          Length = 409

 Score =  286 bits (732), Expect(2) = e-116
 Identities = 157/278 (56%), Positives = 185/278 (66%)
 Frame = -1

Query: 1449 FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270
            F++ H+S + F  PR   R+FR               +    T    KPKP  + S   +
Sbjct: 11   FTTLHLSKTSFILPR---RHFRTVITSSLSTTTTTAAAEFKITFAPPKPKPQLQKSDPTN 67

Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090
                              PWI+R E+G + LQ  PP RFL AM                 
Sbjct: 68   A------PGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAM-ANESTQKKKKRDDKTP 120

Query: 1089 XXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 910
                  A+   EPKYSKAARRFYN+ FR+PPQRL+KVLA+AGVASRRSSEELIF+G+VTV
Sbjct: 121  AKKAKAAMQYVEPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEELIFQGKVTV 180

Query: 909  NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 730
            NGSVCNTPQTRVD  +D+IYVNG+R++KKLPPKVYLALNKPKGYICS+GE+E+KSVFSLF
Sbjct: 181  NGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEEETKSVFSLF 240

Query: 729  DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            DD+MK WDKRNPG+PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 241  DDFMKGWDKRNPGIPKPRLFTVGRLDVATTGLIIVTND 278



 Score =  160 bits (405), Expect(2) = e-116
 Identities = 75/104 (72%), Positives = 89/104 (85%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA I+G V KR+L+ ISEGT +EG++C PD VELLPQ PD SRPRLRIVVHEGRNHEVR
Sbjct: 296 YIATINGAVTKRNLLTISEGTFVEGVKCVPDSVELLPQQPDISRPRLRIVVHEGRNHEVR 355

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++H+LKR RIGG++LPSDL LGKH+EL P  ++ LG
Sbjct: 356 ELVKNAGLQIHALKRIRIGGFRLPSDLALGKHIELTPAHMRALG 399


>ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
            cacao] gi|508726877|gb|EOY18774.1| Pseudouridine synthase
            family protein isoform 2, partial [Theobroma cacao]
          Length = 398

 Score =  275 bits (702), Expect(2) = e-114
 Identities = 139/202 (68%), Positives = 153/202 (75%), Gaps = 3/202 (1%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV---LTPEPKYS 1042
            WIVRGEDG LKLQ+ PP R +HA+                       AV       PK S
Sbjct: 73   WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 132

Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862
            KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQTRVD  K
Sbjct: 133  KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAK 192

Query: 861  DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682
            D+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV  LF+DY+K WDK N G PK
Sbjct: 193  DIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPK 252

Query: 681  PRLFTVGRLDVGTTGLIIVTND 616
            PRLFTVGRLDV TTGLIIVTND
Sbjct: 253  PRLFTVGRLDVATTGLIIVTND 274



 Score =  167 bits (424), Expect(2) = e-114
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V KRHL+ ISEGT IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVR
Sbjct: 292 YIATIDGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 351

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LP+DLGLGKHVELK  D++ +G
Sbjct: 352 ELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMG 395


>ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Fragaria vesca subsp. vesca]
          Length = 397

 Score =  284 bits (727), Expect(2) = e-114
 Identities = 160/270 (59%), Positives = 180/270 (66%)
 Frame = -1

Query: 1425 SVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQDQLIGXXXX 1246
            S+F K  LS   FR               +F  + K    P   P  SS   Q +     
Sbjct: 14   SLFFKRSLSLTPFRTLPRLTCSSSLEFNITFAPAPKPKPDPNSLPASSSSSGQQL----- 68

Query: 1245 XXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV 1066
                      PWIVRGEDGKLKLQS PP R LH M                      + V
Sbjct: 69   --------FIPWIVRGEDGKLKLQSHPPARLLHEM---AQADTKTKSKKNKDTAQKKQRV 117

Query: 1065 LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTP 886
            LT EPK+SKAARRFYN+NFR+  QRLSKVLA+AGVASRRSSE+LIF+G+VTVNGSVCNTP
Sbjct: 118  LTAEPKHSKAARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTP 176

Query: 885  QTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWD 706
            QT VD G+D+IYVNGNR+ KKLPPKVYLALNKPKGYIC++GEK  KSV SLFDDY+KSWD
Sbjct: 177  QTPVDPGRDIIYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWD 234

Query: 705  KRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            KRNPG P+PRLFTVGRLDV TTGLI+VTND
Sbjct: 235  KRNPGTPRPRLFTVGRLDVATTGLIVVTND 264



 Score =  155 bits (393), Expect(2) = e-114
 Identities = 73/104 (70%), Positives = 89/104 (85%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIAVI+G V K+ L+ ISEGT+I+G+ CTPD VELLPQ P+ SR RLRIVVHEGRNHEVR
Sbjct: 282 YIAVIEGSVSKKSLIAISEGTVIDGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVR 341

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVK AGL++HSLKR RIGG++LP++LGLG H+EL+ GD+  LG
Sbjct: 342 ELVKKAGLEIHSLKRVRIGGFRLPTNLGLGTHMELRQGDLSALG 385


>emb|CBI31423.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  271 bits (693), Expect(2) = e-113
 Identities = 129/147 (87%), Positives = 141/147 (95%)
 Frame = -1

Query: 1056 EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTR 877
            EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTVNGSVCNTPQTR
Sbjct: 26   EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85

Query: 876  VDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRN 697
            VD  +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV  LFDDY+KSW+K+N
Sbjct: 86   VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145

Query: 696  PGLPKPRLFTVGRLDVGTTGLIIVTND 616
            PG+PKPR+FTVGRLDV TTGLII+TND
Sbjct: 146  PGVPKPRIFTVGRLDVATTGLIILTND 172



 Score =  167 bits (424), Expect(2) = e-113
 Identities = 79/104 (75%), Positives = 92/104 (88%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V+KRHL+ ISEGT+IEG+ CTPD VELLP  P+ S+PRLR+VVHEGRNHEVR
Sbjct: 190 YIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 249

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVK+AGL++HSLKR RIGG++LPSDLG GKHVELK GD+K LG
Sbjct: 250 ELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALG 293


>gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis]
          Length = 404

 Score =  276 bits (705), Expect(2) = e-113
 Identities = 161/280 (57%), Positives = 178/280 (63%), Gaps = 3/280 (1%)
 Frame = -1

Query: 1446 SSFHISPSVFSKPRLSCR-NFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270
            S  H+S S+ S   LS R + R                F  S     KPKP PE +++ D
Sbjct: 11   SLHHLSSSLLSLSSLSLRPSIRHILPRVLCSLSSSTSEFNISFAPA-KPKPQPE-ATEVD 68

Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090
             L G               WI+RG+DG LKLQS PP R LHAM                 
Sbjct: 69   SLFGADGSQLFIP------WIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAE 122

Query: 1089 XXXXXKAV--LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRV 916
                         EPKYSKAARRFYN+NFR+  QRLSKVLA+AGVASRR+SEELI EGRV
Sbjct: 123  KKKKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRV 182

Query: 915  TVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFS 736
            TVNGSVCNTPQTRVD  KD+IYVNGNR+ K+LPPKVYLALNKPKGYICS G+K  KSV S
Sbjct: 183  TVNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMS 240

Query: 735  LFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            LFDDY+K WDKRN G  KPRLFTVGRLDV TTGLIIVTND
Sbjct: 241  LFDDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTND 280



 Score =  162 bits (409), Expect(2) = e-113
 Identities = 74/104 (71%), Positives = 88/104 (84%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA I+G V K+HL++ISEGT I+G+ C PD VELLP  P+  RPRLR+VVH+GR HEVR
Sbjct: 298 YIATIEGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVR 357

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           EL+KNAGL++HSLKR RIGGY+LPSDLGLGKHVELK GD+  LG
Sbjct: 358 ELMKNAGLEIHSLKRVRIGGYRLPSDLGLGKHVELKQGDLSALG 401


>ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508726876|gb|EOY18773.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 453

 Score =  268 bits (685), Expect(2) = e-112
 Identities = 139/208 (66%), Positives = 153/208 (73%), Gaps = 9/208 (4%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV---LTPEPKYS 1042
            WIVRGEDG LKLQ+ PP R +HA+                       AV       PK S
Sbjct: 122  WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 181

Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQ------T 880
            KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQ      T
Sbjct: 182  KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQT 241

Query: 879  RVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKR 700
            RVD  KD+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV  LF+DY+K WDK 
Sbjct: 242  RVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKM 301

Query: 699  NPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            N G PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 302  NRGSPKPRLFTVGRLDVATTGLIIVTND 329



 Score =  167 bits (424), Expect(2) = e-112
 Identities = 80/104 (76%), Positives = 90/104 (86%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V KRHL+ ISEGT IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVR
Sbjct: 347 YIATIDGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 406

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LP+DLGLGKHVELK  D++ +G
Sbjct: 407 ELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMG 450


>ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum]
            gi|557112308|gb|ESQ52592.1| hypothetical protein
            EUTSA_v10016747mg [Eutrema salsugineum]
          Length = 403

 Score =  279 bits (713), Expect(2) = e-112
 Identities = 142/206 (68%), Positives = 158/206 (76%), Gaps = 7/206 (3%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTP-------E 1054
            WIVRGEDGKLK+QS PP R +HA+                       A  TP       +
Sbjct: 75   WIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSA-STPSSPASHSK 133

Query: 1053 PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRV 874
            PK SKAARRFYN+NF+DPPQRLSKVLA+AGVASRR+SEELIF+G+VTVNGS+C  PQ RV
Sbjct: 134  PKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRV 193

Query: 873  DIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNP 694
            D  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFDD++ SWDKRNP
Sbjct: 194  DPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNP 253

Query: 693  GLPKPRLFTVGRLDVGTTGLIIVTND 616
            G PKPRLFTVGRLDV TTGLI+VTND
Sbjct: 254  GTPKPRLFTVGRLDVATTGLIVVTND 279



 Score =  157 bits (396), Expect(2) = e-112
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YI  + G VHKRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVR
Sbjct: 297 YITTVVGDVHKRHLMTISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 356

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           E+VKNAGL++HSLKR RIGG++LPSDLGLGKHVELK  ++K +G
Sbjct: 357 EIVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMG 400


>ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cucumis sativus] gi|449490423|ref|XP_004158601.1|
            PREDICTED: uncharacterized RNA pseudouridine synthase
            aq_1464-like [Cucumis sativus]
          Length = 398

 Score =  284 bits (727), Expect(2) = e-112
 Identities = 145/199 (72%), Positives = 157/199 (78%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAA 1033
            WIVRGEDG LKLQS PP RFLH++                         +T  PK+SKAA
Sbjct: 84   WIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVSAGKP--------ITEPPKHSKAA 135

Query: 1032 RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 853
            RRFYN+N R+  QRLSKVLA+AGVASRRSSEELIF GRVTVNGSVCNTPQTRVD  +D+I
Sbjct: 136  RRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDII 195

Query: 852  YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 673
            YVNGNR+ KKLPPKVYLALNKPKGYICSSG+KESKSV SLFDDY+KSWDK  PG PKPRL
Sbjct: 196  YVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRL 255

Query: 672  FTVGRLDVGTTGLIIVTND 616
            FTVGRLDV TTGLIIVTND
Sbjct: 256  FTVGRLDVATTGLIIVTND 274



 Score =  151 bits (382), Expect(2) = e-112
 Identities = 71/104 (68%), Positives = 88/104 (84%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA IDG V K++L+ ISEGT+I+G+ CTPD VELLP+ PD S+ RLRIVVHEGRNHEVR
Sbjct: 292 YIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVR 351

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVK AGL+++SLKR RIGG++LPSDLGLG + ELK  ++K +G
Sbjct: 352 ELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIG 395


>ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella]
            gi|482562896|gb|EOA27086.1| hypothetical protein
            CARUB_v10023183mg, partial [Capsella rubella]
          Length = 456

 Score =  276 bits (705), Expect(2) = e-112
 Identities = 142/213 (66%), Positives = 157/213 (73%), Gaps = 14/213 (6%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTPE----- 1054
            WIVRG+DG LKLQS PP R +H  A+D                      +          
Sbjct: 120  WIVRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASSSASAS 179

Query: 1053 -------PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 895
                   PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C
Sbjct: 180  SPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 239

Query: 894  NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 715
            NTPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+YM 
Sbjct: 240  NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMA 299

Query: 714  SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            SWDKRNPG PKPRLFTVGRLDV TTGLIIVTND
Sbjct: 300  SWDKRNPGTPKPRLFTVGRLDVATTGLIIVTND 332



 Score =  157 bits (396), Expect(2) = e-112
 Identities = 72/104 (69%), Positives = 86/104 (82%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YI  + G +HKRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVR
Sbjct: 350 YITTVVGDIHKRHLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVR 409

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL +HSLKR RIGG++LPSDLGLGKH ELK  ++K+LG
Sbjct: 410 ELVKNAGLVVHSLKRVRIGGFRLPSDLGLGKHAELKQSELKVLG 453


>ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325625|gb|EFH56045.1| pseudouridine
            synthase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 412

 Score =  275 bits (702), Expect(2) = e-111
 Identities = 140/213 (65%), Positives = 158/213 (74%), Gaps = 14/213 (6%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTP------ 1057
            WIVRG+DG LKLQS PP R +H  A+D                      +          
Sbjct: 76   WIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSP 135

Query: 1056 ------EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 895
                  +PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C
Sbjct: 136  ASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 195

Query: 894  NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 715
            NTPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+Y+ 
Sbjct: 196  NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLS 255

Query: 714  SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            SWDKRNPG PKPRLFTVGRLDV TTGLI+VTND
Sbjct: 256  SWDKRNPGTPKPRLFTVGRLDVATTGLIVVTND 288



 Score =  157 bits (397), Expect(2) = e-111
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YI  + G +HKRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVR
Sbjct: 306 YITTVVGDIHKRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 365

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LPSDLGLGKHVELK  ++K +G
Sbjct: 366 ELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMG 409


>ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana]
            gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana]
            gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis
            thaliana] gi|330254545|gb|AEC09639.1| pseudouridine
            synthase family protein [Arabidopsis thaliana]
          Length = 410

 Score =  270 bits (689), Expect(2) = e-110
 Identities = 138/212 (65%), Positives = 156/212 (73%), Gaps = 13/212 (6%)
 Frame = -1

Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTP------ 1057
            WIVR +DG LKLQS PP R +H  A+D                      +  T       
Sbjct: 75   WIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPA 134

Query: 1056 -----EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCN 892
                 +PK SKAARRFYN+NF++ PQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +CN
Sbjct: 135  SHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCN 194

Query: 891  TPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKS 712
            TPQTRVD  +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KS  SLFD+Y+ S
Sbjct: 195  TPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSS 254

Query: 711  WDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            WDKRNPG PKPRLFTVGRLDV TTGLI+VTND
Sbjct: 255  WDKRNPGTPKPRLFTVGRLDVATTGLIVVTND 286



 Score =  158 bits (399), Expect(2) = e-110
 Identities = 73/104 (70%), Positives = 87/104 (83%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YI  + G +HKRHL+ ISEGT++EG+ C PD VEL+P+  D  R RLRIVVHEGRNHEVR
Sbjct: 304 YITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 363

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302
           ELVKNAGL++HSLKR RIGG++LPSDLGLGKHVELK  ++K LG
Sbjct: 364 ELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALG 407


>ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
            [Cicer arietinum]
          Length = 410

 Score =  265 bits (677), Expect(2) = e-109
 Identities = 143/235 (60%), Positives = 162/235 (68%), Gaps = 4/235 (1%)
 Frame = -1

Query: 1308 KPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAM---- 1141
            KPKPNP+    + Q                 PWIVRGEDG  KL S PP  FL AM    
Sbjct: 49   KPKPNPKP---EPQTESPNQFPDDNEGQLIIPWIVRGEDGNFKLLSEPPPSFLKAMANDK 105

Query: 1140 DXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGV 961
                                  K   T  P+YSKAARRFYN+NF+D   RLSKVLA++GV
Sbjct: 106  TGTKKSDKNQTTKNKKKSENETKVRATAPPQYSKAARRFYNENFKDSGTRLSKVLAASGV 165

Query: 960  ASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKG 781
            ASRRS E+LIFEG+VTVNGSVCNTPQTRVD  KD+IYVNG+R+ K+ P KVYLALNKPKG
Sbjct: 166  ASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKRQPHKVYLALNKPKG 225

Query: 780  YICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            YICSSGEKESKSV SLFDD++ SWDK++PG+P PRLFTVGRLDV TTGL+IVTND
Sbjct: 226  YICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRLFTVGRLDVATTGLLIVTND 280



 Score =  159 bits (402), Expect(2) = e-109
 Identities = 75/105 (71%), Positives = 86/105 (81%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA ++G VHKRHL  ISEGT IEG+ C PD VELLP  PDA R RLRIVVH+GR HEVR
Sbjct: 298 YIATVNGLVHKRHLTAISEGTTIEGVHCVPDSVELLPSMPDAQRARLRIVVHDGRKHEVR 357

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLGG 299
           ELVKNAGL++HSLKR RIGG++LP DLGLGK++EL P  +K LGG
Sbjct: 358 ELVKNAGLEIHSLKRVRIGGFRLPPDLGLGKYIELNPTKLKALGG 402


>gb|AFK43008.1| unknown [Medicago truncatula]
          Length = 408

 Score =  252 bits (644), Expect(2) = e-105
 Identities = 137/237 (57%), Positives = 158/237 (66%), Gaps = 6/237 (2%)
 Frame = -1

Query: 1308 KPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAM---- 1141
            KPKP P+  ++                    PWIVRGEDG  KL S PP  FL  M    
Sbjct: 50   KPKPTPQPKTQTPH-------DDDDEGPLMIPWIVRGEDGNFKLLSEPPPSFLKEMANAQ 102

Query: 1140 -DXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPP-QRLSKVLASA 967
                                      +T  PKYSKAARRFYN+N +D    RLSKVLA++
Sbjct: 103  TGTKKSEKDQITKNKKKGEKETKIRAVTAPPKYSKAARRFYNENIKDDSGTRLSKVLAAS 162

Query: 966  GVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKP 787
            GVASRRS E+LIF+G+VTVNGSVCNTPQT+VD  KD IYVNG+R+ K+ P KVYLALNKP
Sbjct: 163  GVASRRSCEDLIFKGKVTVNGSVCNTPQTKVDPSKDNIYVNGSRLPKRQPHKVYLALNKP 222

Query: 786  KGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616
            KGYICSSGEKESKSV SLFDD++ SWDK++PG+P PRLFTVGRLDV TTGL+IVTND
Sbjct: 223  KGYICSSGEKESKSVISLFDDFLSSWDKKHPGVPPPRLFTVGRLDVATTGLLIVTND 279



 Score =  158 bits (399), Expect(2) = e-105
 Identities = 73/105 (69%), Positives = 87/105 (82%)
 Frame = -3

Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434
           YIA +DG VHKRHL  ISEGT IEG+ C PD VELLP+ PD  R RLRIVVH+GR HEVR
Sbjct: 297 YIATVDGLVHKRHLTAISEGTTIEGVHCVPDSVELLPRMPDTQRSRLRIVVHDGRKHEVR 356

Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLGG 299
           ELVK+AGL++HSLKR RIGG++LP DLG+GK++EL P ++K LGG
Sbjct: 357 ELVKSAGLEIHSLKRVRIGGFRLPPDLGIGKYIELNPTNLKALGG 401