BLASTX nr result
ID: Akebia23_contig00020821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00020821 (1539 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine... 290 e-119 ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Popu... 288 e-119 ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine... 290 e-118 ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601... 291 e-118 ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citr... 284 e-117 ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619... 284 e-117 ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prun... 281 e-117 gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus... 286 e-116 ref|XP_007009964.1| Pseudouridine synthase family protein isofor... 275 e-114 ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine... 284 e-114 emb|CBI31423.3| unnamed protein product [Vitis vinifera] 271 e-113 gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabi... 276 e-113 ref|XP_007009963.1| Pseudouridine synthase family protein isofor... 268 e-112 ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutr... 279 e-112 ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine... 284 e-112 ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, part... 276 e-112 ref|XP_002879786.1| pseudouridine synthase family protein [Arabi... 275 e-111 ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsi... 270 e-110 ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine... 265 e-109 gb|AFK43008.1| unknown [Medicago truncatula] 252 e-105 >ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464 isoform 1 [Vitis vinifera] Length = 393 Score = 290 bits (743), Expect(2) = e-119 Identities = 159/278 (57%), Positives = 187/278 (67%) Frame = -1 Query: 1449 FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270 FSSFH+S +P L+ R+FR +S + + P ++ Q Sbjct: 19 FSSFHLS-----RPSLARRHFRTIPVRSSISPPST-----TSAEFNISFAPKSKNPKPQS 68 Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090 + + PWIVR E+G L++QSTPP R+L M Sbjct: 69 ETL-------------LIPWIVRDENGNLRVQSTPPERYLQDM----AKAKALSAKKKKK 111 Query: 1089 XXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 910 + EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTV Sbjct: 112 KEESTARAVAVEPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTV 171 Query: 909 NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 730 NGSVCNTPQTRVD +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV LF Sbjct: 172 NGSVCNTPQTRVDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLF 231 Query: 729 DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 DDY+KSW+K+NPG+PKPR+FTVGRLDV TTGLII+TND Sbjct: 232 DDYLKSWNKQNPGVPKPRIFTVGRLDVATTGLIILTND 269 Score = 167 bits (424), Expect(2) = e-119 Identities = 79/104 (75%), Positives = 92/104 (88%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V+KRHL+ ISEGT+IEG+ CTPD VELLP P+ S+PRLR+VVHEGRNHEVR Sbjct: 287 YIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 346 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVK+AGL++HSLKR RIGG++LPSDLG GKHVELK GD+K LG Sbjct: 347 ELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALG 390 >ref|XP_002311995.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa] gi|550332354|gb|EEE89362.2| hypothetical protein POPTR_0008s03540g [Populus trichocarpa] Length = 397 Score = 288 bits (738), Expect(2) = e-119 Identities = 146/199 (73%), Positives = 156/199 (78%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAA 1033 WIVRGEDG LKLQS PP R +HA+ KA L EP SKAA Sbjct: 75 WIVRGEDGNLKLQSNPPARLIHAIADAKTQPKKKKDKVKKESSGNVKAKLEAEPTRSKAA 134 Query: 1032 RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 853 RRFYN+NFRD QRLSKVLA+AGVASRRSSE LIFEG+VTVNGSVCNTPQTRVD G+D I Sbjct: 135 RRFYNENFRDQAQRLSKVLAAAGVASRRSSEALIFEGKVTVNGSVCNTPQTRVDPGRDAI 194 Query: 852 YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 673 YVNGNR+ KKLPPK+Y+ALNKPKGYICS GEKESKSV L DDY +SWDKRNPGLPKPRL Sbjct: 195 YVNGNRLPKKLPPKIYIALNKPKGYICSLGEKESKSVMCLLDDYFQSWDKRNPGLPKPRL 254 Query: 672 FTVGRLDVGTTGLIIVTND 616 FTVGRLDV TTGLIIVTND Sbjct: 255 FTVGRLDVATTGLIIVTND 273 Score = 167 bits (423), Expect(2) = e-119 Identities = 79/104 (75%), Positives = 89/104 (85%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA +DG V KRHL +SEGT+IEG++C PD VELLPQ PD RPRLRIVVHEGRNHEVR Sbjct: 291 YIATVDGVVSKRHLFAVSEGTVIEGVRCVPDSVELLPQQPDRPRPRLRIVVHEGRNHEVR 350 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LPSDLGLGKH ELK D+K LG Sbjct: 351 ELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHAELKQTDLKTLG 394 >ref|XP_004250054.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like [Solanum lycopersicum] Length = 414 Score = 290 bits (743), Expect(2) = e-118 Identities = 156/240 (65%), Positives = 170/240 (70%), Gaps = 5/240 (2%) Frame = -1 Query: 1320 KQTLKPKP-----NPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVR 1156 K KP+P NP S D + PWIVR E G L LQSTPP R Sbjct: 56 KPKTKPEPAIPIINPNSDSNSDSV---PNLDAEVGDQLYIPWIVRDEKGNLTLQSTPPAR 112 Query: 1155 FLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVL 976 LH M V TPEPK+SKAARRFYN+NFRDPPQRLSKVL Sbjct: 113 LLHEM--ANASTGKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVL 170 Query: 975 ASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLAL 796 A+AGVASRRSSEELIF+GRVTVNGSVC TPQT+VD +D+IYVNGNR+ KKLP KVYLAL Sbjct: 171 AAAGVASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLAL 230 Query: 795 NKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 NKPKGYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTND Sbjct: 231 NKPKGYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTND 290 Score = 164 bits (415), Expect(2) = e-118 Identities = 78/104 (75%), Positives = 89/104 (85%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG VHKRHL+ ISEGT+I+G+ CTPD VELLP PD SRPRLRIVVHEGRNHEVR Sbjct: 308 YIATIDGEVHKRHLIAISEGTIIDGVHCTPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 367 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL+L +LKR RIGG++LP+DL LGKHVEL ++K LG Sbjct: 368 ELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQANLKALG 411 >ref|XP_006361680.1| PREDICTED: uncharacterized protein LOC102601559 [Solanum tuberosum] Length = 413 Score = 291 bits (746), Expect(2) = e-118 Identities = 155/236 (65%), Positives = 168/236 (71%), Gaps = 5/236 (2%) Frame = -1 Query: 1308 KPKPNPE-----DSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHA 1144 KPKP PE +S PWIVR E G L LQSTPP R LH Sbjct: 56 KPKPKPEPAIPINSDSDSDSNSVPNLEAEIGDQLYIPWIVRDEKGNLTLQSTPPARLLHE 115 Query: 1143 MDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAG 964 M V TPEPK+SKAARRFYN+NFRDPPQRLSKVLA+AG Sbjct: 116 M--ANASTSKKKKKGKEVASKAATVVPTPEPKHSKAARRFYNENFRDPPQRLSKVLAAAG 173 Query: 963 VASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPK 784 VASRRSSEELIF+GRVTVNGSVC TPQT+VD +D+IYVNGNR+ KKLP KVYLALNKPK Sbjct: 174 VASRRSSEELIFQGRVTVNGSVCKTPQTKVDPARDVIYVNGNRLPKKLPTKVYLALNKPK 233 Query: 783 GYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 GYICSSGEKE+KSV SLFDD++KSWDKR+PG PKPRLFTVGRLDV TTGLIIVTND Sbjct: 234 GYICSSGEKETKSVMSLFDDFIKSWDKRHPGQPKPRLFTVGRLDVATTGLIIVTND 289 Score = 161 bits (408), Expect(2) = e-118 Identities = 77/104 (74%), Positives = 88/104 (84%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG VHKRHL+ ISEGT+I+G+ C PD VELLP PD SRPRLRIVVHEGRNHEVR Sbjct: 307 YIATIDGEVHKRHLIAISEGTVIDGVHCIPDNVELLPGQPDLSRPRLRIVVHEGRNHEVR 366 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL+L +LKR RIGG++LP+DL LGKHVEL ++K LG Sbjct: 367 ELVKNAGLQLRALKRIRIGGFRLPADLALGKHVELNQANLKALG 410 >ref|XP_006436494.1| hypothetical protein CICLE_v10031516mg [Citrus clementina] gi|557538690|gb|ESR49734.1| hypothetical protein CICLE_v10031516mg [Citrus clementina] Length = 451 Score = 284 bits (726), Expect(2) = e-117 Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 3/202 (1%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXKAVLTPE--PKYS 1042 WIVRGEDG LKLQ+ PP R +H + D A P+ PK S Sbjct: 126 WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 185 Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862 KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD + Sbjct: 186 KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 245 Query: 861 DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682 D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+ Sbjct: 246 DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 305 Query: 681 PRLFTVGRLDVGTTGLIIVTND 616 PRLFTVGRLDV TTGLIIVTND Sbjct: 306 PRLFTVGRLDVATTGLIIVTND 327 Score = 168 bits (425), Expect(2) = e-117 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V+KRHL+ ISEGT+IEG CTPD VELLP PD RPR+RIVVHEGRNHEVR Sbjct: 345 YIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 404 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGLKL+SLKR RIGG++LPSDLG+G HVELK D+KL+G Sbjct: 405 ELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMG 448 >ref|XP_006485600.1| PREDICTED: uncharacterized protein LOC102619728 [Citrus sinensis] Length = 401 Score = 284 bits (726), Expect(2) = e-117 Identities = 145/202 (71%), Positives = 159/202 (78%), Gaps = 3/202 (1%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAM-DXXXXXXXXXXXXXXXXXXXXXKAVLTPE--PKYS 1042 WIVRGEDG LKLQ+ PP R +H + D A P+ PK S Sbjct: 76 WIVRGEDGNLKLQTHPPARLVHTLADAKTQNLKVNKKKNDTSAAAAAAAAGGPKAAPKLS 135 Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862 KAARRFYN NFRD P+RLSKVLA+AGVASRRSSEELIF+G+VTVNGSVCNTPQTRVD + Sbjct: 136 KAARRFYNDNFRDTPERLSKVLAAAGVASRRSSEELIFQGQVTVNGSVCNTPQTRVDPAR 195 Query: 861 DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682 D+IYVNG R+ KKLPPKVYLALNKPKGYICS+GEKE KSV SLFDDY+KSWDKRNPGLP+ Sbjct: 196 DIIYVNGKRLPKKLPPKVYLALNKPKGYICSAGEKEVKSVMSLFDDYLKSWDKRNPGLPR 255 Query: 681 PRLFTVGRLDVGTTGLIIVTND 616 PRLFTVGRLDV TTGLIIVTND Sbjct: 256 PRLFTVGRLDVATTGLIIVTND 277 Score = 168 bits (425), Expect(2) = e-117 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V+KRHL+ ISEGT+IEG CTPD VELLP PD RPR+RIVVHEGRNHEVR Sbjct: 295 YIATIDGAVNKRHLIAISEGTVIEGTHCTPDVVELLPPQPDIPRPRIRIVVHEGRNHEVR 354 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGLKL+SLKR RIGG++LPSDLG+G HVELK D+KL+G Sbjct: 355 ELVKNAGLKLYSLKRLRIGGFRLPSDLGIGMHVELKQSDLKLMG 398 >ref|XP_007218062.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica] gi|462414524|gb|EMJ19261.1| hypothetical protein PRUPE_ppa006826mg [Prunus persica] Length = 393 Score = 281 bits (718), Expect(2) = e-117 Identities = 162/282 (57%), Positives = 185/282 (65%), Gaps = 9/282 (3%) Frame = -1 Query: 1434 ISPSVFSKPRLSC---RNFRXXXXXXXXXXXXXXXSFG-----SSTKQTLKP-KPNPEDS 1282 +S S+FSKP LS R F S K LKP P+ Sbjct: 12 LSSSLFSKPSLSLIPIRTLPRITCSLSTSSSSSSLEFNITFAPSKPKPKLKPDSAEPDPE 71 Query: 1281 SKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXX 1102 + QLI PWIVRGEDG LKLQS PP RFL A++ Sbjct: 72 ALAGQLI--------------IPWIVRGEDGNLKLQSHPPARFLQAIETKSKTKKKKEGA 117 Query: 1101 XXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEG 922 V T EPKYSKAARRFYN+NFRD QRLSKVLA+AGVASRRSSE+LIF+G Sbjct: 118 EKR--------VPTAEPKYSKAARRFYNENFRDASQRLSKVLAAAGVASRRSSEQLIFDG 169 Query: 921 RVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSV 742 +VTVNGSVCNTPQ+RVD G+D+IYVNGNR+ K+LPPKVYLALNKPKGYIC+SG E+KSV Sbjct: 170 KVTVNGSVCNTPQSRVDPGRDIIYVNGNRLPKRLPPKVYLALNKPKGYICASG--ENKSV 227 Query: 741 FSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 SLF+DY+K+WDKRN G+P+PRLFTVGRLDV TTGLIIVTND Sbjct: 228 LSLFEDYLKTWDKRNSGIPRPRLFTVGRLDVATTGLIIVTND 269 Score = 170 bits (430), Expect(2) = e-117 Identities = 81/104 (77%), Positives = 91/104 (87%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA I+G V KRHL+ ISEGT+IEG+ CTPD VELLPQ PD SRPRLRIVVHEGRNHEVR Sbjct: 287 YIAAIEGVVSKRHLLAISEGTVIEGVHCTPDSVELLPQQPDMSRPRLRIVVHEGRNHEVR 346 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LPSDLGLGKH+ LK GD+ LG Sbjct: 347 ELVKNAGLEIHSLKRVRIGGFRLPSDLGLGKHMALKQGDLSALG 390 >gb|EYU32425.1| hypothetical protein MIMGU_mgv1a007390mg [Mimulus guttatus] Length = 409 Score = 286 bits (732), Expect(2) = e-116 Identities = 157/278 (56%), Positives = 185/278 (66%) Frame = -1 Query: 1449 FSSFHISPSVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270 F++ H+S + F PR R+FR + T KPKP + S + Sbjct: 11 FTTLHLSKTSFILPR---RHFRTVITSSLSTTTTTAAAEFKITFAPPKPKPQLQKSDPTN 67 Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090 PWI+R E+G + LQ PP RFL AM Sbjct: 68 A------PGIDSGDQLLVPWILRDENGNISLQKMPPQRFLKAM-ANESTQKKKKRDDKTP 120 Query: 1089 XXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTV 910 A+ EPKYSKAARRFYN+ FR+PPQRL+KVLA+AGVASRRSSEELIF+G+VTV Sbjct: 121 AKKAKAAMQYVEPKYSKAARRFYNERFREPPQRLAKVLATAGVASRRSSEELIFQGKVTV 180 Query: 909 NGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLF 730 NGSVCNTPQTRVD +D+IYVNG+R++KKLPPKVYLALNKPKGYICS+GE+E+KSVFSLF Sbjct: 181 NGSVCNTPQTRVDPARDIIYVNGSRLAKKLPPKVYLALNKPKGYICSAGEEETKSVFSLF 240 Query: 729 DDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 DD+MK WDKRNPG+PKPRLFTVGRLDV TTGLIIVTND Sbjct: 241 DDFMKGWDKRNPGIPKPRLFTVGRLDVATTGLIIVTND 278 Score = 160 bits (405), Expect(2) = e-116 Identities = 75/104 (72%), Positives = 89/104 (85%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA I+G V KR+L+ ISEGT +EG++C PD VELLPQ PD SRPRLRIVVHEGRNHEVR Sbjct: 296 YIATINGAVTKRNLLTISEGTFVEGVKCVPDSVELLPQQPDISRPRLRIVVHEGRNHEVR 355 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++H+LKR RIGG++LPSDL LGKH+EL P ++ LG Sbjct: 356 ELVKNAGLQIHALKRIRIGGFRLPSDLALGKHIELTPAHMRALG 399 >ref|XP_007009964.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] gi|508726877|gb|EOY18774.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma cacao] Length = 398 Score = 275 bits (702), Expect(2) = e-114 Identities = 139/202 (68%), Positives = 153/202 (75%), Gaps = 3/202 (1%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV---LTPEPKYS 1042 WIVRGEDG LKLQ+ PP R +HA+ AV PK S Sbjct: 73 WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 132 Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGK 862 KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQTRVD K Sbjct: 133 KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQTRVDPAK 192 Query: 861 DLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPK 682 D+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV LF+DY+K WDK N G PK Sbjct: 193 DIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKMNRGSPK 252 Query: 681 PRLFTVGRLDVGTTGLIIVTND 616 PRLFTVGRLDV TTGLIIVTND Sbjct: 253 PRLFTVGRLDVATTGLIIVTND 274 Score = 167 bits (424), Expect(2) = e-114 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V KRHL+ ISEGT IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVR Sbjct: 292 YIATIDGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 351 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LP+DLGLGKHVELK D++ +G Sbjct: 352 ELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMG 395 >ref|XP_004308770.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like [Fragaria vesca subsp. vesca] Length = 397 Score = 284 bits (727), Expect(2) = e-114 Identities = 160/270 (59%), Positives = 180/270 (66%) Frame = -1 Query: 1425 SVFSKPRLSCRNFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQDQLIGXXXX 1246 S+F K LS FR +F + K P P SS Q + Sbjct: 14 SLFFKRSLSLTPFRTLPRLTCSSSLEFNITFAPAPKPKPDPNSLPASSSSSGQQL----- 68 Query: 1245 XXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV 1066 PWIVRGEDGKLKLQS PP R LH M + V Sbjct: 69 --------FIPWIVRGEDGKLKLQSHPPARLLHEM---AQADTKTKSKKNKDTAQKKQRV 117 Query: 1065 LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTP 886 LT EPK+SKAARRFYN+NFR+ QRLSKVLA+AGVASRRSSE+LIF+G+VTVNGSVCNTP Sbjct: 118 LTAEPKHSKAARRFYNENFRES-QRLSKVLAAAGVASRRSSEQLIFDGKVTVNGSVCNTP 176 Query: 885 QTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWD 706 QT VD G+D+IYVNGNR+ KKLPPKVYLALNKPKGYIC++GEK KSV SLFDDY+KSWD Sbjct: 177 QTPVDPGRDIIYVNGNRLPKKLPPKVYLALNKPKGYICAAGEK--KSVLSLFDDYLKSWD 234 Query: 705 KRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 KRNPG P+PRLFTVGRLDV TTGLI+VTND Sbjct: 235 KRNPGTPRPRLFTVGRLDVATTGLIVVTND 264 Score = 155 bits (393), Expect(2) = e-114 Identities = 73/104 (70%), Positives = 89/104 (85%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIAVI+G V K+ L+ ISEGT+I+G+ CTPD VELLPQ P+ SR RLRIVVHEGRNHEVR Sbjct: 282 YIAVIEGSVSKKSLIAISEGTVIDGVHCTPDSVELLPQQPEISRSRLRIVVHEGRNHEVR 341 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVK AGL++HSLKR RIGG++LP++LGLG H+EL+ GD+ LG Sbjct: 342 ELVKKAGLEIHSLKRVRIGGFRLPTNLGLGTHMELRQGDLSALG 385 >emb|CBI31423.3| unnamed protein product [Vitis vinifera] Length = 296 Score = 271 bits (693), Expect(2) = e-113 Identities = 129/147 (87%), Positives = 141/147 (95%) Frame = -1 Query: 1056 EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTR 877 EPKYSKAARRFYN+NFRDPPQRLSKVLA+AGVASRR+SEELIFEGRVTVNGSVCNTPQTR Sbjct: 26 EPKYSKAARRFYNENFRDPPQRLSKVLAAAGVASRRNSEELIFEGRVTVNGSVCNTPQTR 85 Query: 876 VDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRN 697 VD +D+IYVNGNR+ KKLPPKVYLALNKPKGYICSSGEKESKSV LFDDY+KSW+K+N Sbjct: 86 VDPARDMIYVNGNRLPKKLPPKVYLALNKPKGYICSSGEKESKSVLCLFDDYLKSWNKQN 145 Query: 696 PGLPKPRLFTVGRLDVGTTGLIIVTND 616 PG+PKPR+FTVGRLDV TTGLII+TND Sbjct: 146 PGVPKPRIFTVGRLDVATTGLIILTND 172 Score = 167 bits (424), Expect(2) = e-113 Identities = 79/104 (75%), Positives = 92/104 (88%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V+KRHL+ ISEGT+IEG+ CTPD VELLP P+ S+PRLR+VVHEGRNHEVR Sbjct: 190 YIATIDGVVNKRHLIAISEGTVIEGVHCTPDSVELLPPQPNISKPRLRVVVHEGRNHEVR 249 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVK+AGL++HSLKR RIGG++LPSDLG GKHVELK GD+K LG Sbjct: 250 ELVKSAGLQIHSLKRIRIGGFRLPSDLGHGKHVELKQGDLKALG 293 >gb|EXB96209.1| putative RNA pseudouridine synthase [Morus notabilis] Length = 404 Score = 276 bits (705), Expect(2) = e-113 Identities = 161/280 (57%), Positives = 178/280 (63%), Gaps = 3/280 (1%) Frame = -1 Query: 1446 SSFHISPSVFSKPRLSCR-NFRXXXXXXXXXXXXXXXSFGSSTKQTLKPKPNPEDSSKQD 1270 S H+S S+ S LS R + R F S KPKP PE +++ D Sbjct: 11 SLHHLSSSLLSLSSLSLRPSIRHILPRVLCSLSSSTSEFNISFAPA-KPKPQPE-ATEVD 68 Query: 1269 QLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXX 1090 L G WI+RG+DG LKLQS PP R LHAM Sbjct: 69 SLFGADGSQLFIP------WIIRGDDGNLKLQSHPPARLLHAMAHADTKNSKKKKPTAAE 122 Query: 1089 XXXXXKAV--LTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRV 916 EPKYSKAARRFYN+NFR+ QRLSKVLA+AGVASRR+SEELI EGRV Sbjct: 123 KKKKNDKADKSVAEPKYSKAARRFYNENFRESDQRLSKVLAAAGVASRRNSEELILEGRV 182 Query: 915 TVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFS 736 TVNGSVCNTPQTRVD KD+IYVNGNR+ K+LPPKVYLALNKPKGYICS G+K KSV S Sbjct: 183 TVNGSVCNTPQTRVDPAKDVIYVNGNRLPKRLPPKVYLALNKPKGYICSVGDK--KSVMS 240 Query: 735 LFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 LFDDY+K WDKRN G KPRLFTVGRLDV TTGLIIVTND Sbjct: 241 LFDDYLKIWDKRNLGQSKPRLFTVGRLDVATTGLIIVTND 280 Score = 162 bits (409), Expect(2) = e-113 Identities = 74/104 (71%), Positives = 88/104 (84%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA I+G V K+HL++ISEGT I+G+ C PD VELLP P+ RPRLR+VVH+GR HEVR Sbjct: 298 YIATIEGTVSKKHLLVISEGTFIDGVHCVPDSVELLPNQPEMPRPRLRVVVHDGRKHEVR 357 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 EL+KNAGL++HSLKR RIGGY+LPSDLGLGKHVELK GD+ LG Sbjct: 358 ELMKNAGLEIHSLKRVRIGGYRLPSDLGLGKHVELKQGDLSALG 401 >ref|XP_007009963.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] gi|508726876|gb|EOY18773.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao] Length = 453 Score = 268 bits (685), Expect(2) = e-112 Identities = 139/208 (66%), Positives = 153/208 (73%), Gaps = 9/208 (4%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAV---LTPEPKYS 1042 WIVRGEDG LKLQ+ PP R +HA+ AV PK S Sbjct: 122 WIVRGEDGNLKLQAHPPARLIHALADAKTQKPKKKVDKAVKKKKEISAVGNASVEPPKLS 181 Query: 1041 KAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQ------T 880 KAARRFYN+NF +PPQRLSKVLA+AGVASRR SEELIF+G+VTVNGSVCN PQ T Sbjct: 182 KAARRFYNENFTEPPQRLSKVLAAAGVASRRGSEELIFDGKVTVNGSVCNAPQASDNLQT 241 Query: 879 RVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKR 700 RVD KD+IYVNG+R+ KKLPPK+YLALNKPKGYICSSGEKE KSV LF+DY+K WDK Sbjct: 242 RVDPAKDIIYVNGSRLPKKLPPKIYLALNKPKGYICSSGEKEFKSVLDLFEDYLKRWDKM 301 Query: 699 NPGLPKPRLFTVGRLDVGTTGLIIVTND 616 N G PKPRLFTVGRLDV TTGLIIVTND Sbjct: 302 NRGSPKPRLFTVGRLDVATTGLIIVTND 329 Score = 167 bits (424), Expect(2) = e-112 Identities = 80/104 (76%), Positives = 90/104 (86%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V KRHL+ ISEGT IEGI C PD VELLP+ PD SRPRLRIVVHEGRNHEVR Sbjct: 347 YIATIDGEVKKRHLIAISEGTEIEGIHCIPDSVELLPRQPDLSRPRLRIVVHEGRNHEVR 406 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LP+DLGLGKHVELK D++ +G Sbjct: 407 ELVKNAGLEIHSLKRVRIGGFRLPADLGLGKHVELKQSDLRAMG 450 >ref|XP_006411139.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum] gi|557112308|gb|ESQ52592.1| hypothetical protein EUTSA_v10016747mg [Eutrema salsugineum] Length = 403 Score = 279 bits (713), Expect(2) = e-112 Identities = 142/206 (68%), Positives = 158/206 (76%), Gaps = 7/206 (3%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTP-------E 1054 WIVRGEDGKLK+QS PP R +HA+ A TP + Sbjct: 75 WIVRGEDGKLKVQSQPPARLIHALADATTQNPKKKDKSKKKKPQSTSA-STPSSPASHSK 133 Query: 1053 PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRV 874 PK SKAARRFYN+NF+DPPQRLSKVLA+AGVASRR+SEELIF+G+VTVNGS+C PQ RV Sbjct: 134 PKLSKAARRFYNENFKDPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGSLCTAPQIRV 193 Query: 873 DIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNP 694 D +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFDD++ SWDKRNP Sbjct: 194 DPTRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDDFLASWDKRNP 253 Query: 693 GLPKPRLFTVGRLDVGTTGLIIVTND 616 G PKPRLFTVGRLDV TTGLI+VTND Sbjct: 254 GTPKPRLFTVGRLDVATTGLIVVTND 279 Score = 157 bits (396), Expect(2) = e-112 Identities = 72/104 (69%), Positives = 87/104 (83%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YI + G VHKRHL+ ISEGT++EG+ C PD VEL+P+ D R RLRIVVHEGRNHEVR Sbjct: 297 YITTVVGDVHKRHLMTISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 356 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 E+VKNAGL++HSLKR RIGG++LPSDLGLGKHVELK ++K +G Sbjct: 357 EIVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMG 400 >ref|XP_004140075.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like [Cucumis sativus] gi|449490423|ref|XP_004158601.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like [Cucumis sativus] Length = 398 Score = 284 bits (727), Expect(2) = e-112 Identities = 145/199 (72%), Positives = 157/199 (78%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLHAMDXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAA 1033 WIVRGEDG LKLQS PP RFLH++ +T PK+SKAA Sbjct: 84 WIVRGEDGNLKLQSHPPTRFLHSVSEDETKPKKKKVSAGKP--------ITEPPKHSKAA 135 Query: 1032 RRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLI 853 RRFYN+N R+ QRLSKVLA+AGVASRRSSEELIF GRVTVNGSVCNTPQTRVD +D+I Sbjct: 136 RRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSVCNTPQTRVDPARDII 195 Query: 852 YVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRL 673 YVNGNR+ KKLPPKVYLALNKPKGYICSSG+KESKSV SLFDDY+KSWDK PG PKPRL Sbjct: 196 YVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRL 255 Query: 672 FTVGRLDVGTTGLIIVTND 616 FTVGRLDV TTGLIIVTND Sbjct: 256 FTVGRLDVATTGLIIVTND 274 Score = 151 bits (382), Expect(2) = e-112 Identities = 71/104 (68%), Positives = 88/104 (84%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA IDG V K++L+ ISEGT+I+G+ CTPD VELLP+ PD S+ RLRIVVHEGRNHEVR Sbjct: 292 YIAAIDGTVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDISKSRLRIVVHEGRNHEVR 351 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVK AGL+++SLKR RIGG++LPSDLGLG + ELK ++K +G Sbjct: 352 ELVKAAGLEIYSLKRVRIGGFRLPSDLGLGSYTELKQSELKAIG 395 >ref|XP_006294188.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella] gi|482562896|gb|EOA27086.1| hypothetical protein CARUB_v10023183mg, partial [Capsella rubella] Length = 456 Score = 276 bits (705), Expect(2) = e-112 Identities = 142/213 (66%), Positives = 157/213 (73%), Gaps = 14/213 (6%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTPE----- 1054 WIVRG+DG LKLQS PP R +H A+D + Sbjct: 120 WIVRGDDGTLKLQSQPPARLIHSLAIDATTQNPKKKEKSKKKQTQATSSSATASSSASAS 179 Query: 1053 -------PKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 895 PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C Sbjct: 180 SPPPQSVPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 239 Query: 894 NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 715 NTPQTRVD +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+YM Sbjct: 240 NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEVKSVISLFDEYMA 299 Query: 714 SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 SWDKRNPG PKPRLFTVGRLDV TTGLIIVTND Sbjct: 300 SWDKRNPGTPKPRLFTVGRLDVATTGLIIVTND 332 Score = 157 bits (396), Expect(2) = e-112 Identities = 72/104 (69%), Positives = 86/104 (82%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YI + G +HKRHL+ ISEGT++EG+ C PD VEL+P+ D R RLRIVVHEGRNHEVR Sbjct: 350 YITTVVGDIHKRHLMAISEGTIVEGVHCVPDLVELMPKQHDIPRARLRIVVHEGRNHEVR 409 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL +HSLKR RIGG++LPSDLGLGKH ELK ++K+LG Sbjct: 410 ELVKNAGLVVHSLKRVRIGGFRLPSDLGLGKHAELKQSELKVLG 453 >ref|XP_002879786.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325625|gb|EFH56045.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] Length = 412 Score = 275 bits (702), Expect(2) = e-111 Identities = 140/213 (65%), Positives = 158/213 (74%), Gaps = 14/213 (6%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTP------ 1057 WIVRG+DG LKLQS PP R +H A+D + Sbjct: 76 WIVRGDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKPKKKQPQATSSSASATASASSP 135 Query: 1056 ------EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVC 895 +PK SKAARRFYN+NF++PPQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +C Sbjct: 136 ASHSEVKPKLSKAARRFYNENFKEPPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILC 195 Query: 894 NTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMK 715 NTPQTRVD +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KSV SLFD+Y+ Sbjct: 196 NTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSVISLFDEYLS 255 Query: 714 SWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 SWDKRNPG PKPRLFTVGRLDV TTGLI+VTND Sbjct: 256 SWDKRNPGTPKPRLFTVGRLDVATTGLIVVTND 288 Score = 157 bits (397), Expect(2) = e-111 Identities = 72/104 (69%), Positives = 87/104 (83%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YI + G +HKRHL+ ISEGT++EG+ C PD VEL+P+ D R RLRIVVHEGRNHEVR Sbjct: 306 YITTVVGDIHKRHLMAISEGTIVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 365 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LPSDLGLGKHVELK ++K +G Sbjct: 366 ELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKAMG 409 >ref|NP_181447.2| protein SUPPRESSOR OF VARIEGATION 1 [Arabidopsis thaliana] gi|21617894|gb|AAM66944.1| unknown [Arabidopsis thaliana] gi|26450440|dbj|BAC42334.1| unknown protein [Arabidopsis thaliana] gi|330254545|gb|AEC09639.1| pseudouridine synthase family protein [Arabidopsis thaliana] Length = 410 Score = 270 bits (689), Expect(2) = e-110 Identities = 138/212 (65%), Positives = 156/212 (73%), Gaps = 13/212 (6%) Frame = -1 Query: 1212 WIVRGEDGKLKLQSTPPVRFLH--AMDXXXXXXXXXXXXXXXXXXXXXKAVLTP------ 1057 WIVR +DG LKLQS PP R +H A+D + T Sbjct: 75 WIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPA 134 Query: 1056 -----EPKYSKAARRFYNQNFRDPPQRLSKVLASAGVASRRSSEELIFEGRVTVNGSVCN 892 +PK SKAARRFYN+NF++ PQRLSKVLA+AGVASRR+SEELIF+G+VTVNG +CN Sbjct: 135 SHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCN 194 Query: 891 TPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKGYICSSGEKESKSVFSLFDDYMKS 712 TPQTRVD +D+IYVNGNRI KKLPPKVY ALNKPKGYICSSGEKE KS SLFD+Y+ S Sbjct: 195 TPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSS 254 Query: 711 WDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 WDKRNPG PKPRLFTVGRLDV TTGLI+VTND Sbjct: 255 WDKRNPGTPKPRLFTVGRLDVATTGLIVVTND 286 Score = 158 bits (399), Expect(2) = e-110 Identities = 73/104 (70%), Positives = 87/104 (83%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YI + G +HKRHL+ ISEGT++EG+ C PD VEL+P+ D R RLRIVVHEGRNHEVR Sbjct: 304 YITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVR 363 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLG 302 ELVKNAGL++HSLKR RIGG++LPSDLGLGKHVELK ++K LG Sbjct: 364 ELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALG 407 >ref|XP_004496237.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like [Cicer arietinum] Length = 410 Score = 265 bits (677), Expect(2) = e-109 Identities = 143/235 (60%), Positives = 162/235 (68%), Gaps = 4/235 (1%) Frame = -1 Query: 1308 KPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAM---- 1141 KPKPNP+ + Q PWIVRGEDG KL S PP FL AM Sbjct: 49 KPKPNPKP---EPQTESPNQFPDDNEGQLIIPWIVRGEDGNFKLLSEPPPSFLKAMANDK 105 Query: 1140 DXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPPQRLSKVLASAGV 961 K T P+YSKAARRFYN+NF+D RLSKVLA++GV Sbjct: 106 TGTKKSDKNQTTKNKKKSENETKVRATAPPQYSKAARRFYNENFKDSGTRLSKVLAASGV 165 Query: 960 ASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKPKG 781 ASRRS E+LIFEG+VTVNGSVCNTPQTRVD KD+IYVNG+R+ K+ P KVYLALNKPKG Sbjct: 166 ASRRSCEDLIFEGKVTVNGSVCNTPQTRVDPAKDVIYVNGSRLPKRQPHKVYLALNKPKG 225 Query: 780 YICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 YICSSGEKESKSV SLFDD++ SWDK++PG+P PRLFTVGRLDV TTGL+IVTND Sbjct: 226 YICSSGEKESKSVLSLFDDFLSSWDKKHPGVPMPRLFTVGRLDVATTGLLIVTND 280 Score = 159 bits (402), Expect(2) = e-109 Identities = 75/105 (71%), Positives = 86/105 (81%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA ++G VHKRHL ISEGT IEG+ C PD VELLP PDA R RLRIVVH+GR HEVR Sbjct: 298 YIATVNGLVHKRHLTAISEGTTIEGVHCVPDSVELLPSMPDAQRARLRIVVHDGRKHEVR 357 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLGG 299 ELVKNAGL++HSLKR RIGG++LP DLGLGK++EL P +K LGG Sbjct: 358 ELVKNAGLEIHSLKRVRIGGFRLPPDLGLGKYIELNPTKLKALGG 402 >gb|AFK43008.1| unknown [Medicago truncatula] Length = 408 Score = 252 bits (644), Expect(2) = e-105 Identities = 137/237 (57%), Positives = 158/237 (66%), Gaps = 6/237 (2%) Frame = -1 Query: 1308 KPKPNPEDSSKQDQLIGXXXXXXXXXXXXXXPWIVRGEDGKLKLQSTPPVRFLHAM---- 1141 KPKP P+ ++ PWIVRGEDG KL S PP FL M Sbjct: 50 KPKPTPQPKTQTPH-------DDDDEGPLMIPWIVRGEDGNFKLLSEPPPSFLKEMANAQ 102 Query: 1140 -DXXXXXXXXXXXXXXXXXXXXXKAVLTPEPKYSKAARRFYNQNFRDPP-QRLSKVLASA 967 +T PKYSKAARRFYN+N +D RLSKVLA++ Sbjct: 103 TGTKKSEKDQITKNKKKGEKETKIRAVTAPPKYSKAARRFYNENIKDDSGTRLSKVLAAS 162 Query: 966 GVASRRSSEELIFEGRVTVNGSVCNTPQTRVDIGKDLIYVNGNRISKKLPPKVYLALNKP 787 GVASRRS E+LIF+G+VTVNGSVCNTPQT+VD KD IYVNG+R+ K+ P KVYLALNKP Sbjct: 163 GVASRRSCEDLIFKGKVTVNGSVCNTPQTKVDPSKDNIYVNGSRLPKRQPHKVYLALNKP 222 Query: 786 KGYICSSGEKESKSVFSLFDDYMKSWDKRNPGLPKPRLFTVGRLDVGTTGLIIVTND 616 KGYICSSGEKESKSV SLFDD++ SWDK++PG+P PRLFTVGRLDV TTGL+IVTND Sbjct: 223 KGYICSSGEKESKSVISLFDDFLSSWDKKHPGVPPPRLFTVGRLDVATTGLLIVTND 279 Score = 158 bits (399), Expect(2) = e-105 Identities = 73/105 (69%), Positives = 87/105 (82%) Frame = -3 Query: 613 YIAVIDGPVHKRHLVIISEGTLIEGIQCTPDFVELLPQSPDASRPRLRIVVHEGRNHEVR 434 YIA +DG VHKRHL ISEGT IEG+ C PD VELLP+ PD R RLRIVVH+GR HEVR Sbjct: 297 YIATVDGLVHKRHLTAISEGTTIEGVHCVPDSVELLPRMPDTQRSRLRIVVHDGRKHEVR 356 Query: 433 ELVKNAGLKLHSLKRTRIGGYKLPSDLGLGKHVELKPGDVKLLGG 299 ELVK+AGL++HSLKR RIGG++LP DLG+GK++EL P ++K LGG Sbjct: 357 ELVKSAGLEIHSLKRVRIGGFRLPPDLGIGKYIELNPTNLKALGG 401