BLASTX nr result
ID: Akebia23_contig00019812
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00019812
(921 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 47 7e-09
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 47 1e-08
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 51 2e-08
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 45 3e-08
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 44 1e-07
gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis] 41 2e-07
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN... 52 3e-07
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 47 2e-06
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 45 2e-06
emb|CCH50976.1| T4.15 [Malus x robusta] 48 5e-06
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 47.0 bits (110), Expect(2) = 7e-09
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 518 CVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDKI 694
C + +P++L KF +LYG E CA +K++ E++MLRWMSG T DKI
Sbjct: 391 CDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAEVKMLRWMSGHTRLDKI 449
Score = 40.4 bits (93), Expect(2) = 7e-09
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLV-DLRVS-KFKIRNMEE*LR--GLW*KQ 315
+PY +V+ L HI VPWC+LF DDI+L+ +LR K+ +E L GL +
Sbjct: 262 SPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRISR 321
Query: 316 PR-QSMYCNLLRTLFGMKQLVEADK*KLSQENHFCYLGSIIYKDGE 450
+ + M C VE + L + F YLG II +GE
Sbjct: 322 SKTEYMECKFSLRRENTNIEVEIGENILRKVKSFKYLGCIIQDNGE 367
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKFKIRNMEE*LRGLW*KQPRQS 327
+PY LV+ + I G++PWCMLF DD++LVD S+ + E LW +Q +S
Sbjct: 286 SPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVD--DSRTGVNRKLE----LW-RQILES 338
Query: 328 MYCNLLRTLFGM-------------KQLVEADK*KLSQENHFCYLGSIIYKDGE 450
L RT ++ V D + Q++ F YLGS++ KDG+
Sbjct: 339 KGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGD 392
Score = 40.0 bits (92), Expect(2) = 1e-08
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 518 CVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDKI 694
C + +P +L KF ILYG E + ++ EMRMLRWM G T +D++
Sbjct: 416 CDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDRV 474
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 51.2 bits (121), Expect(2) = 2e-08
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +2
Query: 512 VPCVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDK 691
V C +PI+L KF ILYG E A+ NK+ EMRMLRWM GKT +DK
Sbjct: 223 VLCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDK 282
Query: 692 I 694
I
Sbjct: 283 I 283
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKFKIRNMEE*LRGL------W* 309
+PY L++ L I P CMLF DDI+L+ + R +E R L
Sbjct: 97 SPYLFTLILDVLTEQIQEIAPRCMLFADDIVLLGESREELNER-LETWRRALETHGFRLS 155
Query: 310 KQPRQSMYCNLLRTLFGMKQLVEADK*KLSQENHFCYLGSIIYKDGE 450
+ + M C + ++ D + Q F YLGS+I DGE
Sbjct: 156 RSKSEYMECQFNKRRVSNSEVKIGDH-IIPQVTRFKYLGSVIQDDGE 201
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 44.7 bits (104), Expect(2) = 3e-08
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +2
Query: 512 VPCVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDK 691
V C +PI+L KF +LYG E A+ + KM+ EMRMLRWMSG T D+
Sbjct: 507 VLCDVEMPIKLKGKFYRTVIRPAMLYGSECWAIKRQHIAKMSVIEMRMLRWMSGHTRMDR 566
Query: 692 I 694
I
Sbjct: 567 I 567
Score = 40.8 bits (94), Expect(2) = 3e-08
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKFKIRNMEE*LRGLW*KQPRQS 327
+PY + +V+ L I VPWCM F DI+LVD R +E LW KQ ++
Sbjct: 381 SPYLITIVMDELTREIQDRVPWCMFFAGDIVLVDEHREGVN-RKLE-----LW-KQTLET 433
Query: 328 MYCNLLRT-----------LFGMKQLVEADK*KLSQENHFCYLGSIIYKDGE 450
L RT + D +L F YLGSI+ +G+
Sbjct: 434 KGFKLSRTKTEYMHCRFSNSSNQSDGISLDGVELGASRKFRYLGSIVQYEGD 485
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 44.3 bits (103), Expect(2) = 1e-07
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKFKIRNMEE*LRGLW*KQPRQS 327
+P LV+ + I G++PWCMLF DD++LVD S+ + E LW +Q +S
Sbjct: 26 SPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVD--DSRTGVNRKLE----LW-RQTLES 78
Query: 328 MYCNLLRTLFGM-------------KQLVEADK*KLSQENHFCYLGSIIYKDGE 450
L RT ++ V D + Q++ F YLGS++ KDG+
Sbjct: 79 KGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGD 132
Score = 38.9 bits (89), Expect(2) = 1e-07
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 518 CVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDKI 694
C + +P +L KF ILYG E + ++ EMRMLRWM G T +D +
Sbjct: 156 CDKRVPQKLKGKFYRTAIRPAILYGAECWPTKRRHVQQLGVAEMRMLRWMCGHTRRDHV 214
>gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]
Length = 1059
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +1
Query: 154 YFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKF--KIRNMEE*LRGLW*KQPR-- 321
Y +VI L I +PWCMLF DDI+LVD K+ + L K R
Sbjct: 62 YLFTIVIDELTREIQDGIPWCMLFADDIVLVDEHWEGINRKLERWRQTLEAQGFKLSRIK 121
Query: 322 -QSMYCNLLRTLFGMKQLVEADK*KLSQENHFCYLGSIIYKDGE 450
+ M+C L + D + F YLGSI+ +G+
Sbjct: 122 IEYMHCR-FGNLRDQSDGISLDGVVIGASRKFRYLGSIVQCEGD 164
Score = 41.2 bits (95), Expect(2) = 2e-07
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +2
Query: 518 CVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDKI 694
C +PI+L KF +LYG E A+ + KM+ EMRMLRWM+G D+I
Sbjct: 188 CDNKMPIKLKGKFYRTAIRPSMLYGSECWAIKRQQIYKMSVAEMRMLRWMNGYMRMDRI 246
>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
putative [Medicago truncatula]
Length = 195
Score = 52.0 bits (123), Expect(3) = 3e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +2
Query: 512 VPCVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDK 691
V C + +P++L KF +LYG E A+ N+++ TEMRMLRWMSGKT +D+
Sbjct: 115 VLCDKKVPLKLKGKFYRTAIRPALLYGTECWAVKSQHENQVSVTEMRMLRWMSGKTRQDR 174
Query: 692 I 694
I
Sbjct: 175 I 175
Score = 26.6 bits (57), Expect(3) = 3e-07
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 254 E*VNSKLEIWRNNLEVYG 307
E VN +LE WR LE YG
Sbjct: 25 EEVNGRLETWRQALEAYG 42
Score = 22.7 bits (47), Expect(3) = 3e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 394 LSQENHFCYLGSIIYKDGE 450
+ Q F YLGS + DGE
Sbjct: 75 IPQVTRFKYLGSFVQNDGE 93
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 47.4 bits (111), Expect(2) = 2e-06
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIMLVDLRVSKFKIRNMEE*LRGLW*KQPRQS 327
+PY LV+ + I G++PWCMLF DD++LVD S+ + E LW +Q +S
Sbjct: 236 SPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVD--DSRTGVNRKLE----LW-RQTLES 288
Query: 328 MYCNLLRT-----LFGM------KQLVEADK*KLSQENHFCYLGSIIYKDG 447
L RT + G ++ V D + +++ F YLGS++ +DG
Sbjct: 289 KGFRLSRTKTEYMMCGFSTTRCEEEEVSLDGQVVPRKDTFWYLGSLLQEDG 339
Score = 32.0 bits (71), Expect(2) = 2e-06
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 518 CVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDKI 694
C + +P +L KF +LYG E + +++ EM MLR M G T KD++
Sbjct: 364 CDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQQLDVAEMCMLRCMCGHTRKDRV 422
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
chalumnae]
Length = 1500
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Frame = +1
Query: 148 TPYFLVLVICGLGTHIPGEVPWCMLFEDDIML-------VDLRVSKFKIRNMEE*LRGLW 306
+P+ +LV+ L I E PWCMLF DDIML V+ + ++ ++ MEE RGL
Sbjct: 569 SPFLFILVLDTLTKDIQKEPPWCMLFADDIMLCAESREEVEKDLERW-VQCMEE--RGL- 624
Query: 307 *KQPRQSMYCNLLRTLFGMKQL--VEADK*KLSQENHFCYLGSIIYKDG 447
K R + + G ++ ++ + KL + F YLGSII DG
Sbjct: 625 -KMSRMMTGYMVAKFSEGSDEMESMKIGEKKLRRTEEFKYLGSIISTDG 672
Score = 33.5 bits (75), Expect(2) = 2e-06
Identities = 23/65 (35%), Positives = 28/65 (43%)
Frame = +2
Query: 500 ECDRVPCVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKT 679
E V C IP L K +++ E + K M+ TEMRMLRWM G
Sbjct: 691 EVSGVICDNGIPAWLKGKVYKNVIRQALVFRAECWCIRKKEEQDMSVTEMRMLRWMLGMM 750
Query: 680 MKDKI 694
DKI
Sbjct: 751 RTDKI 755
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 47.8 bits (112), Expect(2) = 5e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +2
Query: 512 VPCVQHIPIRLNRKFTT*K*ELVILYGVEYCALIK*LGNKMNATEMRMLRWMSGKTMKDK 691
V C + +P++L KF +LYG E A+ +KM EMRMLRWM G T KDK
Sbjct: 831 VLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDK 890
Query: 692 I 694
I
Sbjct: 891 I 891
Score = 30.0 bits (66), Expect(2) = 5e-06
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Frame = +1
Query: 193 IPGEVPW-------CMLFEDDIMLVDLRVS--KFKIRNMEE*LRGLW*KQPR---QSMYC 336
+P ++ W CMLF DDI+L+D K+ E L + R + M C
Sbjct: 712 VPRDILWRILEKKGCMLFADDIVLIDETQEGVNAKLNLWREVLESKGLRLSRSKTEYMEC 771
Query: 337 NLLRTLFGMKQL-VEADK*KLSQENHFCYLGSIIYKDGE 450
G +L V ++ + + F YLGSI+ K+GE
Sbjct: 772 KFSAN-GGQNELGVRIGDQEIPKSDRFRYLGSILQKNGE 809