BLASTX nr result

ID: Akebia23_contig00019787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00019787
         (589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007020622.1| FRIGIDA like 1, putative [Theobroma cacao] g...    59   8e-07

>ref|XP_007020622.1| FRIGIDA like 1, putative [Theobroma cacao]
           gi|508720250|gb|EOY12147.1| FRIGIDA like 1, putative
           [Theobroma cacao]
          Length = 596

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 42/122 (34%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
 Frame = +3

Query: 21  SGNKRSRTAAHNT--GAVMTITTVNSQVYP------KSMGMVPGQMAPYLGSSA-QYGWP 173
           SGNKR RT A      A + +   +S V P      +  G++P   A YLGS A  YG  
Sbjct: 476 SGNKRPRTFASAVPMAAPLGVAGASSAVPPFQQSHLQPAGLLPDCSAAYLGSPAGPYGLA 535

Query: 174 ATTTPSQYPNAAAGPSGFGATPMNAGMHLNPSMPNFYPSDPHSTPDLYRAMAYGGYGLPP 353
            + T   Y  ++ G  G    PM   M+ NP+  + YP D        R   Y  YGLPP
Sbjct: 536 GSATVPPYAGSSVGLYGLAGAPMGFSMNPNPAASHLYPYD--------RLTTYSAYGLPP 587

Query: 354 SY 359
            Y
Sbjct: 588 HY 589


Top