BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00019114
         (2578 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      560   e-156
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   546   e-152
ref|XP_007051395.1| Homeodomain-like superfamily protein isoform...   511   e-142
ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prun...   498   e-138
ref|XP_007051399.1| Homeodomain-like superfamily protein isoform...   492   e-136
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             485   e-134
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...   484   e-133
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...   482   e-133
gb|ABK96054.1| unknown [Populus trichocarpa]                          479   e-132
ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citr...   478   e-132
ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citr...   477   e-131
ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Popu...   473   e-130
dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|2196...   472   e-130
ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cice...   443   e-121
gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum cry...   442   e-121
ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca...   431   e-118
gb|AHW98794.1| LATE ELONGATED HYPOCOTYL [Cicer arietinum]             422   e-115
ref|NP_001235187.1| late elongated hypocotyl and circadian clock...   421   e-114
ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circ...   418   e-114
ref|XP_004140527.1| PREDICTED: protein LHY-like [Cucumis sativus]     417   e-113

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  560 bits (1442), Expect = e-156
 Identities = 355/776 (45%), Positives = 442/776 (56%), Gaps = 86/776 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G+D+I KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDIYSSGEDLIIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXIDTS----AHTSFSVRVN 1966
            IRSHAQKFFSKLE EA V                                A  +      
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-- 1792
            DGK L S SS +P KQ+  +E DP PE+  +G EK     E  DE N SEV TLFQEA  
Sbjct: 121  DGKLLASVSSSHPGKQILDLEKDPLPERP-SGDEKPGNENENQDEDNCSEVFTLFQEAPC 179

Query: 1791 -SISLASKSSIPTSAVLTSSCTFREFIPSKNEIS-------------------------- 1693
             S+S A+K+SIPT   L +SCTFREF+P   E S                          
Sbjct: 180  TSMSSANKNSIPTPVPLRNSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFR 239

Query: 1692 ----DHGSNKAPNLENR----------ERTNEPKKLEKLGTLSTNEVQTNRSCPRHVPVH 1555
                D G +KA NLEN           E+T+EP + E  G+   NE+Q  ++ PRHVPVH
Sbjct: 240  QKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVH 299

Query: 1554 IVDGNQGTCMQTQLSNM-YLSSF-----FYGNPNFFTNPTASSTTEW------SSVHQSL 1411
            ++DG+ GTC Q   S M Y  S       +G+PN F NP AS+ TE       SS+HQS 
Sbjct: 300  VLDGSLGTCTQAPSSEMTYGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIHQSF 359

Query: 1410 PNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGET 1231
            P    P   P  SNQD+Y+SFL ISSTF+SLIVSTL++NP          +FWPC+N E 
Sbjct: 360  PTFHTP-FGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWPCSNMEA 418

Query: 1230 S--------GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPS 1075
            S        GGFP R ++P+P+M                AHG+LPLC+ PLH  GFTC  
Sbjct: 419  SADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCA-PLH-TGFTCAP 476

Query: 1074 AS-------DIGQVPFVNKEGKDNNPQD----LDFSESPKPQHSVSRSPVLTSSTFEESG 928
            AS       + GQ P  N E ++N PQD    L+ SE+ + QHS S+SP ++SS  EESG
Sbjct: 477  ASATSVPPTNTGQAPAANTERRENTPQDQQLDLECSEALQAQHSASKSPAMSSSDSEESG 536

Query: 927  GARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHE 748
            GA+ ++ E  A  +E+   ++ E +D T+ K++ +V R          SEVET+ALEKHE
Sbjct: 537  GAKPNT-ESTAPDNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVETDALEKHE 595

Query: 747  -----LKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPP 583
                  KE D++  A +            NESWKEVSEEGR+AF AL SRE+LPQ+FSPP
Sbjct: 596  NGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSFSPP 655

Query: 582  KDISH---QRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKNAEK 412
             D+ +   Q     E ++  +EK E+  LQL+LN+K       H  +EK   + N N E+
Sbjct: 656  HDLKNKGLQNKDFIENEQGGDEKHEN-ALQLDLNSKAWGPCSSHQDVEKNGLMENDNREE 714

Query: 411  GLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            GL+T+  G GK+K RR GFKPYKRCSVEA + RV N   + EE GPKRIRLEG+ S
Sbjct: 715  GLLTIGLGYGKIKGRRTGFKPYKRCSVEAIDSRVTNCCSQGEEKGPKRIRLEGDVS 770


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  546 bits (1406), Expect = e-152
 Identities = 348/764 (45%), Positives = 434/764 (56%), Gaps = 86/764 (11%)
 Frame = -2

Query: 2277 KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQIRSHAQKFFSKL 2098
            +TRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQIRSHAQKFFSKL
Sbjct: 99   QTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKL 158

Query: 2097 EGEAHVXXXXXXXXXXXXXXXXXXXXXXXXIDTS----AHTSFSVRVNDGKHLTSASSLY 1930
            E EA V                                A  +      DGK L S SS +
Sbjct: 159  EKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTKDGKLLASVSSXH 218

Query: 1929 PEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA---SISLASKSSIP 1759
            P KQ+  +E DP PE+  +G EK     E  DE N SEV TLFQEA   S+S A+K+SIP
Sbjct: 219  PGKQILDLEKDPLPERP-SGDEKPGNENENQDEDNCSEVFTLFQEAPCTSMSSANKNSIP 277

Query: 1758 TSAVLTSSCTFREFIPSKNEIS------------------------------DHGSNKAP 1669
            T   L +SCTFREF+P   E S                              D G +KA 
Sbjct: 278  TPVPLRNSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKAS 337

Query: 1668 NLENR----------ERTNEPKKLEKLGTLSTNEVQTNRSCPRHVPVHIVDGNQGTCMQT 1519
            NLEN           E+T+EP + E  G+   NE+Q  ++ PRHVPVH++DG+ GTC Q 
Sbjct: 338  NLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQA 397

Query: 1518 QLSNM-YLSSF-----FYGNPNFFTNPTASSTTEW------SSVHQSLPNASPPPVTPFL 1375
              S M Y  S       +G+PN F NP AS+ TE       SS+HQS P    P   P  
Sbjct: 398  PSSEMTYGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIHQSFPTFHTP-FGPIR 456

Query: 1374 SNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS--------GGF 1219
            SNQD+Y+SFL ISSTF+SLIVSTL++NP          +FWPC+N E S        GGF
Sbjct: 457  SNQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWPCSNMEASADSPSGTIGGF 516

Query: 1218 PLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS-------DIG 1060
            P R ++P+P+M                AHG+LPLC+ PLH  GFTC  AS       + G
Sbjct: 517  PARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCA-PLH-TGFTCAPASATSVPPTNTG 574

Query: 1059 QVPFVNKEGKDNNPQD----LDFSESPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAA 892
            Q P  N E ++N PQD    L+ SE+ + QHS S+SP ++SS  EESGGA+ ++ E  A 
Sbjct: 575  QAPAANTERRENTPQDQQLDLECSEALQAQHSASKSPAMSSSDSEESGGAKPNT-ESTAP 633

Query: 891  GHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHE-----LKEPDLS 727
             +E+   ++ E +D T+ K++ +V R          SEVET+ALEKHE      KE D++
Sbjct: 634  DNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVETDALEKHENGEEECKEADVN 693

Query: 726  HLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPKDISH---QRNG 556
              A +            NESWKEVSEEGR+AF AL SRE+LPQ+FSPP D+ +   Q   
Sbjct: 694  QAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQNKD 753

Query: 555  GEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKNAEKGLMTMEFGNGKL 376
              E ++  +EK E+  LQL+LN+K       H  +EK   + N N E+GL+T+  G GK+
Sbjct: 754  FIENEQGGDEKHEN-ALQLDLNSKAWGPCSSHQDVEKNGLMENDNREEGLLTIGLGYGKI 812

Query: 375  KARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            K RR GFKPYKRCSVEA + RV N   + EE GPKRIRLEG+ S
Sbjct: 813  KGRRTGFKPYKRCSVEAIDSRVTNCCSQGEEKGPKRIRLEGDXS 856


>ref|XP_007051395.1| Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]
            gi|590720710|ref|XP_007051405.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590720714|ref|XP_007051406.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508703656|gb|EOX95552.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703666|gb|EOX95562.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703667|gb|EOX95563.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 739

 Score =  511 bits (1317), Expect = e-142
 Identities = 334/747 (44%), Positives = 437/747 (58%), Gaps = 57/747 (7%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G++++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFSVRVND 1963
            IRSHAQKFFSKLE EA    V                          T A T+  V   D
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAKD 120

Query: 1962 GKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA--- 1792
            GK  T  SSL   KQ+  +E +P PE+ + G EK +  K+  D+ + SEV+TL  EA   
Sbjct: 121  GKSETPLSSLRC-KQVLDLEKEPLPERPN-GDEKPINLKDNQDD-SCSEVVTLLHEANCS 177

Query: 1791 SISLASKSSIPTSAVLTSSCTFREFIPS-KNEISDHGSNKAPNLENRERTNE-----PKK 1630
            S+S  +K+SIPTSA L +SCTFREF+PS K  I D+G++KA NL+N   ++E      KK
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1629 LEKLGTLSTNEVQTNRSCPRHVPVHIVDGNQGTCMQTQLSNM-YLSSFF------YGNPN 1471
             +  G L  +E Q  ++ PRHV VH++DG+ GT  Q    +M +  S F      +G  N
Sbjct: 238  DDVDGGLRADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDVHGQTN 297

Query: 1470 FFTNPTASSTTEWS-----SVHQSLPNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVST 1306
             F NP AS+TTE       S HQ+ P    PP T    N ++Y+SFL++SSTF+SLI ST
Sbjct: 298  LFANPAASATTEHQNNAPRSTHQAFPTFH-PPFTHVCPNPEDYRSFLHVSSTFSSLIAST 356

Query: 1305 LIKNPXXXXXXXXXXSFWPCTNGETS--------GGFPLRHMSPSPNMXXXXXXXXXXXX 1150
            L++NP          +FWP  N ++S        GGFP R M+P+P+M            
Sbjct: 357  LLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAAT 416

Query: 1149 XXXXAHGMLPLCSLPLHHPGFTCPSAS-------DIGQVPFVNKEGKDNNPQDL------ 1009
                AHG+LPLC+ PL H GFTC  AS       D  Q P    E KDNN QDL      
Sbjct: 417  AWWAAHGLLPLCA-PL-HTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQ 474

Query: 1008 ---DFSESPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAAGHEQKPASIIEQHDSTEE 838
               ++SE+ + QHS S+SP  +SS  E  G A+ ++  +KAA  ++K A++ E  D+ + 
Sbjct: 475  LDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVNTG-VKAA-DDEKAAAVTEPQDANKT 532

Query: 837  KTKTKVVRXXXXXXXXXXSEVETEALEKHE-----LKEPDLSHLAVDHXXXXXXXXXXXN 673
            K + +V R          SEVET+ LEK+E      K  D +H  V+            +
Sbjct: 533  KNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSCSNPS 592

Query: 672  ESWKEVSEEGRMAFEALLSREILPQNFSPP---KDISHQRNGGEEGKETSNEKDEDDTLQ 502
            +SWKEVSE GR+AF+AL SRE+LPQ+FSPP   K+   Q++  E+ K+ S+EKD   T  
Sbjct: 593  DSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD-GATSA 651

Query: 501  LNLNNKTSKVRPDHSGLEKRERLINKN-AEKGLMTMEFGNGKLKARRIGFKPYKRCSVEA 325
            L+LN++T +      G+EK      ++   +GL+T+   + KLKARR GFKPYKRCSVEA
Sbjct: 652  LDLNSQTVRSCSYRQGVEKNGLSRGEDIVGEGLLTIGLEHAKLKARRTGFKPYKRCSVEA 711

Query: 324  EERRVRNGSGKEEENGPKRIRLEGEAS 244
            +E +V N   + EE GPKRIRLEGEAS
Sbjct: 712  KENKVMNAGSQGEEKGPKRIRLEGEAS 738


>ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prunus persica]
            gi|462415391|gb|EMJ20128.1| hypothetical protein
            PRUPE_ppa001765mg [Prunus persica]
          Length = 768

 Score =  498 bits (1282), Expect = e-138
 Identities = 335/777 (43%), Positives = 430/777 (55%), Gaps = 88/777 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M T S G+D++ K RKPYTITKQRERWTEEEHNRFL+ALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTQSSGEDLVIKARKPYTITKQRERWTEEEHNRFLDALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAH----VXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS---V 1975
            IRSHAQKFFSKLE EAH    +                           SA  +++   V
Sbjct: 61   IRSHAQKFFSKLEKEAHNKGVLAGQSIDIDIPPPRPKRKPSNPYPRKSCSAAPTWATSHV 120

Query: 1974 RVNDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE 1795
               DGK L+S SS +  KQ+  +E +P  E+     E     KE  DE N SEVLT+  E
Sbjct: 121  AAKDGKLLSSTSSSHC-KQVLDLEKEPLDERP-TKEENPRNGKENQDE-NCSEVLTMLLE 177

Query: 1794 ---ASISLASKSSIPTSAVLTSSCTFREFIPSKNE------------------------- 1699
               +S+S A+K+SIPT   L ++CTFREF+PS  E                         
Sbjct: 178  DHCSSVSSANKNSIPTQVALRNACTFREFVPSPKEVISQDVTNDSYVTTELNGNQNLKKN 237

Query: 1698 -----ISDHGSNKAPNLEN----RERTNEPKKLEKLG-TLSTNEVQTNRSCPRHVPVHIV 1549
                 + D+G++ A   EN     ++  + +K + L   L T+ +Q  ++ PR+VPVH++
Sbjct: 238  DAKKIVQDNGTSGASESENSNAFHKKLVQGEKADDLNCALPTDGMQGTQTYPRNVPVHVL 297

Query: 1548 DGNQGTCMQTQLSNMYLSSF-------FYGNPNFFTNPTASSTTEW------SSVHQSLP 1408
            DG+ G C Q   ++M  +          +G PN F NPTAS+TTE       SSVHQS P
Sbjct: 298  DGSLGACNQITPADMSFADTAFHPMGKVHGQPNLFANPTASTTTEHESNTSRSSVHQSFP 357

Query: 1407 NASPPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS 1228
             A  PP TP    Q +YQSFL++SSTF+SLIVS+L++NP          +FWP  N E +
Sbjct: 358  -AFHPPFTPLHHGQKDYQSFLHMSSTFSSLIVSSLLQNPAAHAAASFAATFWPYANAENT 416

Query: 1227 --------GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSA 1072
                    GGFP R M+  P+M                +HG+LPLC+ P+    F+CP  
Sbjct: 417  EDSPACPPGGFPSRQMNSPPSMAAIAAATVAAASAWWASHGLLPLCA-PV-QTAFSCPPV 474

Query: 1071 S-------DIGQVPFVNKEGKDNNPQ---------DLDFSESPKPQHSVSRSPVLTSSTF 940
            S       D G+ P  N E  +N+ Q         D +  E+ + QH  S+SP + SS+ 
Sbjct: 475  SMTGVPSMDTGEAPAANIERGENSLQIPSLQDQQVDPEHLEAVEAQHPASKSPSM-SSSH 533

Query: 939  EESGGARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEAL 760
             ++GGA  ++  LKAA  E+  AS  E +DS   K++ +V R          SEVET+AL
Sbjct: 534  SDNGGAEPNT-VLKAAADEKVVASTDEVNDSNNAKSRKQVDRSSCGSNTPSSSEVETDAL 592

Query: 759  E-----KHELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQN 595
            E     K ELKEPDL+H A D            ++ WKEVSEEGRMAF+AL SRE+LPQ+
Sbjct: 593  EKQEKGKEELKEPDLNHPASDSTYRRSRSIINISDPWKEVSEEGRMAFQALFSREVLPQS 652

Query: 594  FS-PPKDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKNA 418
            FS PPKD  HQ     EGKE + EKDED +L L+LN KT      H G+EK    +  N 
Sbjct: 653  FSPPPKDKEHQTT--TEGKENAEEKDEDASL-LDLNKKTWVPFSCHLGVEKNVSPVGDND 709

Query: 417  EKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEA 247
             +GL+T+    GKLKARR GFKPYKRCSVEA E R  N     EE GPKR+RLEGEA
Sbjct: 710  AEGLLTIGLSQGKLKARRTGFKPYKRCSVEANENRAANAISHCEEKGPKRLRLEGEA 766


>ref|XP_007051399.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
            gi|590720702|ref|XP_007051403.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|590720706|ref|XP_007051404.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|508703660|gb|EOX95556.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
          Length = 707

 Score =  492 bits (1266), Expect = e-136
 Identities = 325/740 (43%), Positives = 425/740 (57%), Gaps = 50/740 (6%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G++++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFSVRVND 1963
            IRSHAQKFFSKLE EA    V                          T A T+  V   D
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGAATTAQVGAKD 120

Query: 1962 GKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA--- 1792
            GK  T  SSL   KQ+  +E +P PE+ + G EK +  K+  D+ + SEV+TL  EA   
Sbjct: 121  GKSETPLSSLRC-KQVLDLEKEPLPERPN-GDEKPINLKDNQDD-SCSEVVTLLHEANCS 177

Query: 1791 SISLASKSSIPTSAVLTSSCTFREFIPS-KNEISDHGSNKAPNLENRERTNE-----PKK 1630
            S+S  +K+SIPTSA L +SCTFREF+PS K  I D+G++KA NL+N   ++E      KK
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1629 LEKLGTLSTNEVQTNRSCPRHVPVHIVDGNQGTCMQTQLSNMYLSSFFYGNPNFFTNPTA 1450
             +  G L  +E Q  ++ PRHV VH++DG+ GT                          A
Sbjct: 238  DDVDGGLRADETQATQNYPRHVAVHVLDGSLGT-------------------------AA 272

Query: 1449 SSTTEWS-----SVHQSLPNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXX 1285
            S+TTE       S HQ+ P    PP T    N ++Y+SFL++SSTF+SLI STL++NP  
Sbjct: 273  SATTEHQNNAPRSTHQAFPTFH-PPFTHVCPNPEDYRSFLHVSSTFSSLIASTLLQNPAA 331

Query: 1284 XXXXXXXXSFWPCTNGETS--------GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHG 1129
                    +FWP  N ++S        GGFP R M+P+P+M                AHG
Sbjct: 332  HAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAWWAAHG 391

Query: 1128 MLPLCSLPLHHPGFTCPSAS-------DIGQVPFVNKEGKDNNPQDL---------DFSE 997
            +LPLC+ PL H GFTC  AS       D  Q P    E KDNN QDL         ++SE
Sbjct: 392  LLPLCA-PL-HTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQDQQLDPEYSE 449

Query: 996  SPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVV 817
            + + QHS S+SP  +SS  E  G A+ ++  +KAA  ++K A++ E  D+ + K + +V 
Sbjct: 450  ALQAQHSASKSPTSSSSDSEACGDAKVNTG-VKAA-DDEKAAAVTEPQDANKTKNRKQVD 507

Query: 816  RXXXXXXXXXXSEVETEALEKHE-----LKEPDLSHLAVDHXXXXXXXXXXXNESWKEVS 652
            R          SEVET+ LEK+E      K  D +H  V+            ++SWKEVS
Sbjct: 508  RSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSCSNPSDSWKEVS 567

Query: 651  EEGRMAFEALLSREILPQNFSPP---KDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKT 481
            E GR+AF+AL SRE+LPQ+FSPP   K+   Q++  E+ K+ S+EKD   T  L+LN++T
Sbjct: 568  EGGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD-GATSALDLNSQT 626

Query: 480  SKVRPDHSGLEKRERLINKN-AEKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRN 304
             +      G+EK      ++   +GL+T+   + KLKARR GFKPYKRCSVEA+E +V N
Sbjct: 627  VRSCSYRQGVEKNGLSRGEDIVGEGLLTIGLEHAKLKARRTGFKPYKRCSVEAKENKVMN 686

Query: 303  GSGKEEENGPKRIRLEGEAS 244
               + EE GPKRIRLEGEAS
Sbjct: 687  AGSQGEEKGPKRIRLEGEAS 706


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  485 bits (1249), Expect = e-134
 Identities = 343/780 (43%), Positives = 431/780 (55%), Gaps = 89/780 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G++++ K RKPYTITKQRERWTE+EHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKARKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS-VRVN 1966
            IRSHAQKFFSKLE EA    V                          TS     S V   
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPTSQVGTK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE--- 1795
            DGK  TSASS    KQ   +E +P PEK + G EK   AK+  D+ N SEV TL QE   
Sbjct: 121  DGKLFTSASSS-DCKQALDLEKEPLPEKPN-GDEKPENAKDNQDD-NCSEVFTLHQEVHC 177

Query: 1794 ASISLASKSSIPTSAVLTSSCTFREFIPS------------------------------K 1705
            +S+S A++SS+PT   L +  T REF+PS                              K
Sbjct: 178  SSVSSANRSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAK 237

Query: 1704 NEISDHGSNKAPNLEN----RERTNEPKKLEKLG-TLSTNEVQTNRSCPRHVPVHIVDGN 1540
              I D G++    L N     E+  +  K + L   L  +E+Q  ++ PRHVPV +VDG+
Sbjct: 238  QTIQDTGTSNGSKLGNHNVLHEKPIQGDKTQDLNCALPMDEMQATQNYPRHVPVQVVDGS 297

Query: 1539 QGTCMQTQLSNM-YLSSFF------YGNPNFFTNPTASSTTEWS-----SVHQSLPNASP 1396
             GTC QT  S+M +  S F      + + N FTNP AS+TTE       SV+QS P A  
Sbjct: 298  LGTCTQTPSSDMSFQDSIFHPMGEVHRHHNPFTNPAASATTEHQNNVPRSVNQSFP-AFH 356

Query: 1395 PPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGE------ 1234
            PP TP   NQD+YQSFL++SSTF+SLIVSTL++NP          + WP  N E      
Sbjct: 357  PPFTPIRHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAATVWPYANVEASADSP 416

Query: 1233 --TSGGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS--- 1069
              T G FP R M  +P+M                AHG++PLC+ PL    FTC  AS   
Sbjct: 417  ASTQGVFPPRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLCA-PL-PTAFTCNPASTAA 474

Query: 1068 ----DIGQVPFVNKEGKDNNPQ-------DLDFSESPKPQHSVSRSPVLTSSTFEESGGA 922
                D GQ P    EG+ N  Q       D ++SE+ + QHS S+ P+ +SS  EESGGA
Sbjct: 475  VPPTDSGQAPAAKTEGEVNTLQTPPLQQLDPEYSEAVQAQHSDSKLPIPSSSDSEESGGA 534

Query: 921  RSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHEL- 745
            + +S   KA  HE    +  E HDS + K + +V R          S+ ET+ALEK E+ 
Sbjct: 535  KLNSGP-KATDHE-NAVTATELHDSNKTKGRKQVDRSSCGSNTASSSDRETDALEKQEMG 592

Query: 744  ----KEPDLSHLAVDH-----XXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNF 592
                KEPD +H A D                 N+SWK VSEEGR+AF+AL SRE+LPQ+F
Sbjct: 593  KEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEEGRLAFQALFSREVLPQSF 652

Query: 591  SPP---KDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKN 421
            SPP   K++ +Q++   + K+ +NE D + +L L+LN++ S       G+   E   N N
Sbjct: 653  SPPHDLKNMGNQKDNTTDDKQNANENDGNASL-LDLNSQKSGSCSVQQGILNFEP--NNN 709

Query: 420  AEKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEASI 241
             E GL+T+    GKLKARR GFKPYKRCSVEA+E RV N SG+ EE GPKRIRLEGEASI
Sbjct: 710  GE-GLLTIGLAYGKLKARRTGFKPYKRCSVEAKENRVANASGQGEEKGPKRIRLEGEASI 768


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
            gi|223545573|gb|EEF47077.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 768

 Score =  484 bits (1245), Expect = e-133
 Identities = 334/778 (42%), Positives = 432/778 (55%), Gaps = 88/778 (11%)
 Frame = -2

Query: 2313 MGTYSPG-DDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAV 2137
            M TYS G +D++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAV
Sbjct: 1    MDTYSSGGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 60

Query: 2136 QIRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAH-TSFSVRV 1969
            QIRSHAQKFFSKLE EA    V                          T A  T   V  
Sbjct: 61   QIRSHAQKFFSKLEKEAIAKGVPIGQALDIDIPPPRPKRKPSNPYPRKTGAGPTPSQVAA 120

Query: 1968 NDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA- 1792
             DGK L S  S     Q+  +E +P PE+ + G EK  +A E   + N SEV TL QEA 
Sbjct: 121  KDGK-LPSLVSFPRCTQVLDLEKEPLPERLN-GHEKQTDATENQGD-NCSEVFTLLQEAH 177

Query: 1791 --SISLASKSSIPTSAVLTSSCTFREFIPS------------------------------ 1708
              S+S A+K+S+ T+  L +SC+FREF+PS                              
Sbjct: 178  CSSVSSANKNSVVTAEALKNSCSFREFVPSLKKVVNQDATNESYVTIELEGNQKLDKPDA 237

Query: 1707 KNEISDHGSNKAPNLEN---RERTNEPKKLEKLGT-LSTNEVQTNRSCPRHVPVHIVDGN 1540
            K  + D+GS+KA   E+    E+ ++ KK ++  + L T+E++T +  PRHVPVH+++G+
Sbjct: 238  KQTVQDNGSSKASKSESCLFHEKFDQAKKSDEFNSALPTDEMETMQGYPRHVPVHVLEGS 297

Query: 1539 QGTCMQTQLSNMYL-------SSFFYGNPNFFTNPTASSTTEW------SSVHQSLPNAS 1399
             GTCMQT  S++         +   +G+PN +++P AS+TTE       SS HQS P  S
Sbjct: 298  LGTCMQTPTSDVSFQEPIFCPTGEVHGHPNLYSHPAASATTEHQNTAPRSSTHQSFP--S 355

Query: 1398 PPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS--- 1228
             PP      NQD+Y+SFL+ISSTF+SLIVSTL++NP          +FWP  N E+S   
Sbjct: 356  FPPFNSTQHNQDDYRSFLHISSTFSSLIVSTLLQNPAAHSAASFAATFWPYANLESSADS 415

Query: 1227 -----GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS-- 1069
                 GGFP R M+ +P+M                AHG+LPLC+ PL H  FTCP AS  
Sbjct: 416  PICPQGGFPSRQMNSAPSMAAIAAATVAAATAWWAAHGLLPLCA-PL-HAAFTCPPASGT 473

Query: 1068 -----DIGQVPFVNKEGK--------DNNPQDLDFSESPKPQHSVSRSPVLTSSTFEESG 928
                   GQVP    E K         N   D++ S+  + Q+S S+S  ++ S  EESG
Sbjct: 474  AVASTGAGQVPAAKTERKLTVENPLLQNQQFDVEHSKVLQAQNSASKSLEMSLSDSEESG 533

Query: 927  GARSSSNELKAAGHEQ-KPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEK- 754
            G + ++   KA  HE   PA   E  D ++ K +    R          SEVET+ALEK 
Sbjct: 534  GPKKNTGS-KATDHEMATPAP--EVQDPSKAKARKPADRSSCGSNTSSSSEVETDALEKL 590

Query: 753  ----HELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSP 586
                 ELKE D +    +            ++SWKEVSEEGR+AF+AL SRE+LPQ+FSP
Sbjct: 591  EKGNEELKETDTNPEPTESSCRRSRSNSSISDSWKEVSEEGRLAFQALFSREVLPQSFSP 650

Query: 585  P---KDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRER-LINKNA 418
            P   K+ + Q++  EE K+ + EK+E + L L+LN   S     H   EK E      N 
Sbjct: 651  PHVLKNEARQKDEIEEDKQNTVEKNE-NALLLSLNGNISGFCTSHQEAEKIEMPRCENNG 709

Query: 417  EKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            E GL+T   G+GKLKARR GFKPYKRCSVEA+E R+     + EE GPKRIR+EG+AS
Sbjct: 710  EDGLLTFGLGHGKLKARRTGFKPYKRCSVEAKENRMLTAGSQGEEKGPKRIRVEGKAS 767


>dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|219687749|dbj|BAH09385.1|
            PnLHY2 [Populus nigra]
          Length = 764

 Score =  482 bits (1240), Expect = e-133
 Identities = 325/776 (41%), Positives = 439/776 (56%), Gaps = 85/776 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  +S G+D++ KTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQ+IEEHIGTKT VQ
Sbjct: 1    MEIFSSGEDLVIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTVVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXIDTS----AHTSFSVRVN 1966
            IRSHAQKFFSKLE EA V                                   +  V   
Sbjct: 61   IRSHAQKFFSKLEKEAIVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAK 120

Query: 1965 DGKHLTSASSLYPE-KQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE-- 1795
            DGK LTSAS  +P  KQ+ G+E +P PEK + G E+  +AKE  D+ N SEV +L QE  
Sbjct: 121  DGKLLTSAS--FPCCKQVLGLEKEPLPEKLN-GNERPTDAKENQDD-NCSEVFSLLQEPH 176

Query: 1794 -ASISLASKSSIPTSAVLTSSCTFREFIPSKNEISDHGSNKAP---------NLENRE-- 1651
             +S+   +K+S+PT  +L  +  FREF+ S  E +   SN++           L+N +  
Sbjct: 177  CSSVPSVNKNSVPTLDILKKASPFREFVSSPKEGNHDASNQSSVTVDLGANQKLDNSDVK 236

Query: 1650 ---RTNEPKKLEK-----------------LGTLSTNEVQTNRSCPRHVPVHIVDGNQGT 1531
                T+E  K E                  +G L T+ +Q  ++ PRHVPVH++DG+ GT
Sbjct: 237  QDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQNYPRHVPVHVLDGSLGT 296

Query: 1530 CMQTQLSNM-YLSSFFY------GNPNFFTNPTASSTTEW------SSVHQSLPNASPPP 1390
            CMQT  S+  +  S F+        PN +++P AS TT+       SS+HQS P+  PPP
Sbjct: 297  CMQTPPSDFSFQESIFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSF-PPP 355

Query: 1389 VTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS------ 1228
             TP   NQD+Y+SFL++SSTF+SL+VS+L++NP          +FWP  N E+S      
Sbjct: 356  FTPTHHNQDDYRSFLHMSSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVESSADSPAC 415

Query: 1227 --GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS----- 1069
              GGF  R ++ +P+M                AHG+LP+C+ PLH   F CP AS     
Sbjct: 416  AQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCA-PLH-TSFACPPASATAIQ 473

Query: 1068 --DIGQVPFVNKEGKDN--NP------QDLDFSESPKPQHSVSRSPVLTSSTFEESGGAR 919
              D GQV     E K+   NP      QD + +E+ + Q+S S+SP +TSS  EESGG +
Sbjct: 474  SVDTGQVSATKTERKETAENPSLQGQIQDQEHTEALQAQNSASKSPKITSSDSEESGGPQ 533

Query: 918  SSSNELKAAGHE--QKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEK--- 754
             ++   +   HE   KP  +    DS++ K++  + R          SE+ET+ALEK   
Sbjct: 534  LNTRP-EVIDHELTTKPHEV---QDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKAEK 589

Query: 753  --HELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
               E KE D +H A +            N+SWKEVSEEGR+AF+ L +RE+LPQ+FSPP 
Sbjct: 590  GTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQTLFAREVLPQSFSPPH 649

Query: 579  DISHQRNGGEEG--KETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKN-AEKG 409
            D+  + +  E+   K+ ++EKD D +L +NLN KT +    H   EK      +N  E+G
Sbjct: 650  DLKSKMHQNEDAGEKKDADEKDGDASL-INLNTKTWECCSGHQEGEKNALSRCENYGEEG 708

Query: 408  LMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEASI 241
            L+T+  G+GKLK RR GFKPYKRCS+EA+E R   GSG+ EE GPKR+RLEGEAS+
Sbjct: 709  LLTIGLGHGKLKVRRTGFKPYKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEASV 764


>gb|ABK96054.1| unknown [Populus trichocarpa]
          Length = 764

 Score =  479 bits (1232), Expect = e-132
 Identities = 326/776 (42%), Positives = 438/776 (56%), Gaps = 85/776 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  +S G+D++ KTRKPYTITKQRERWTEEEH+RFLEALKLYGRAWQ+IEEHIGTKT VQ
Sbjct: 1    MEIFSSGEDLVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTVVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXIDTS----AHTSFSVRVN 1966
            IRSHAQKFFSKLE EA V                                   +  V   
Sbjct: 61   IRSHAQKFFSKLEKEAVVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAK 120

Query: 1965 DGKHLTSASSLYPE-KQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE-- 1795
            DGK LTSAS  +P  KQ+ G+E +P PEK + G E+   AKE  D+ N SEV +L QE  
Sbjct: 121  DGKLLTSAS--FPCCKQVLGLEKEPLPEKLN-GDERPTNAKENQDD-NCSEVFSLLQEPH 176

Query: 1794 -ASISLASKSSIPTSAVLTSSCTFREFIPSKNEISDHGSNKAP---------NLENRE-- 1651
             +S+   +K+S+PT  +L  +  FREF+ S  E +   SN++           L+N +  
Sbjct: 177  CSSVPSINKNSVPTLDILKKASPFREFVSSPKEGNHDASNQSSVTVELGANQKLDNSDVK 236

Query: 1650 ---RTNEPKKLEK-----------------LGTLSTNEVQTNRSCPRHVPVHIVDGNQGT 1531
                T+E  K E                  +G L T+ +Q  ++ PRHVPVH++DG+ GT
Sbjct: 237  QDNSTSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQNYPRHVPVHVLDGSLGT 296

Query: 1530 CMQTQLSNM-YLSSFFY------GNPNFFTNPTASSTTEW------SSVHQSLPNASPPP 1390
            CMQT  S+  +  S F+        PN +++P AS TT+       SS+HQS P+  PPP
Sbjct: 297  CMQTPPSDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSF-PPP 355

Query: 1389 VTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS------ 1228
             TP   NQD+Y+SFL+ISSTF+SL+VS+L++NP          +FWP  N E+S      
Sbjct: 356  FTPTHHNQDDYRSFLHISSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVESSADSPAC 415

Query: 1227 --GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS----- 1069
              GGF  R ++ +P+M                AHG+LP+C+ PLH   F CP AS     
Sbjct: 416  AQGGFQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCA-PLH-TSFACPPASATAIQ 473

Query: 1068 --DIGQVPFVNKEGKDN--NP------QDLDFSESPKPQHSVSRSPVLTSSTFEESGGAR 919
              D GQV     E K+   NP      Q  + +E+ + Q+S S+SP +TSS  EESGG +
Sbjct: 474  SVDTGQVSATKTERKETAENPSLQGQIQGPEHTEALQAQNSASKSPKITSSDSEESGGPK 533

Query: 918  SSSNELKAAGHE--QKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEK--- 754
             ++   +   HE   KP  +    DS++ K++  + R          SE+ET+ALEK   
Sbjct: 534  LNTGP-EVIDHELTTKPHEV---QDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKAEK 589

Query: 753  --HELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
               E KE D +H A +            N+SWKEVSEEGR+AF+AL +RE+LPQ+FSPP 
Sbjct: 590  GTEEPKEDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFSPPH 649

Query: 579  DISHQRNGGEEG--KETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKN-AEKG 409
            D+  + +  E+   K+ ++EKD D +L +NLN+KT +    H   EK      +N  E+ 
Sbjct: 650  DLKSKMHQNEDAGEKKDADEKDGDASL-INLNSKTWECCSGHQEGEKNALSRCENYGEEE 708

Query: 408  LMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEASI 241
            L+T+  G+GKLK RR GFKPYKRCS+EA+E R   GSG+ EE GPKR+RLEGEAS+
Sbjct: 709  LLTIGLGHGKLKVRRTGFKPYKRCSLEAKESRTGTGSGQGEEKGPKRLRLEGEASV 764


>ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citrus clementina]
            gi|567904438|ref|XP_006444707.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904440|ref|XP_006444708.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904442|ref|XP_006444709.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904444|ref|XP_006444710.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546968|gb|ESR57946.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546969|gb|ESR57947.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546970|gb|ESR57948.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546971|gb|ESR57949.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546972|gb|ESR57950.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
          Length = 765

 Score =  478 bits (1231), Expect = e-132
 Identities = 332/771 (43%), Positives = 416/771 (53%), Gaps = 84/771 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G+D++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTK AVQ
Sbjct: 1    MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS-VRVN 1966
            IRSHAQKFFSKLE EA    V                          T  +   S +   
Sbjct: 61   IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-- 1792
            DGK  +S SSL    Q+  +E +P  ++ + G EK     E+  + N SEV  L QEA  
Sbjct: 121  DGKLRSSVSSLRCN-QVLDLEKEPICDRPN-GDEKPTYTIES-QKDNCSEVFILHQEAHC 177

Query: 1791 -SISLASKSSIPTSAVLTSSCTFREFIPSKNEI--------------------------- 1696
             S+S  +K+S+PT   L  SC  REF+PS  E+                           
Sbjct: 178  SSVSSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGKPDAK 237

Query: 1695 ---SDHGSNKAPNLENRERTNE-----PKKLEKLGTLSTNEVQTNRSCPRHVPVHIVDGN 1540
                D+GS+K  NLEN   ++E      K+ +    L T EVQ  ++ PRHV VHI+DG+
Sbjct: 238  LALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQATQNYPRHVNVHILDGS 297

Query: 1539 QGTCMQTQLSNMYLSSFF------YGNPNFFTNPTASSTTE-----WSSVHQSLPNASPP 1393
             GT  Q+        S F      +GNPN FTNP AS+TTE       S HQS P    P
Sbjct: 298  LGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQSFPTFH-P 356

Query: 1392 PVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS----- 1228
            P T F  +QD+Y+SFL+ISS F+SLIVSTL++NP          +FWP TN ETS     
Sbjct: 357  PFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETSADSPT 416

Query: 1227 ---GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCP------- 1078
               GGF  R MS  P+M                AHG+LPLC+ P H P FTCP       
Sbjct: 417  CPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCA-PFHTP-FTCPPACATAV 474

Query: 1077 SASDIGQVPFVNKEGKDNNP---------QDLDFSESPKPQHSVSRSPVLTSSTFEESGG 925
            S+ D  QVP    +  DN P          DL++SE+ + Q+S S+S  + +S  EES  
Sbjct: 475  SSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESAS 534

Query: 924  ARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALE---- 757
            A+    ELKA  HE K +   E HDS + K + +V R          SEVET+ALE    
Sbjct: 535  AKLKM-ELKATDHE-KNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEKQEK 592

Query: 756  -KHELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
             K E KE D S  A D             +SWKEVSE GR+AF+AL SRE+LPQ+FSPP 
Sbjct: 593  GKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSFSPPH 652

Query: 579  DISHQ-RNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRE-RLINKNAEKGL 406
            D+  + +    E K+  N+KD D +L  +LN+KT      H  +EK     +  N  +GL
Sbjct: 653  DLKDKMQQDNVEDKQNGNKKDGDKSL-FDLNSKTWGSCFGHQEVEKSTVSGVENNGGEGL 711

Query: 405  MTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEG 253
            +T+  G+GKLKARR GFKPYKRCSVEA+E R+ N   + EE  PKRIR+EG
Sbjct: 712  LTIGLGHGKLKARRTGFKPYKRCSVEAKENRILNTGNQAEEKCPKRIRVEG 762


>ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citrus sinensis]
            gi|568876654|ref|XP_006491390.1| PREDICTED: protein
            LHY-like isoform X2 [Citrus sinensis]
            gi|568876656|ref|XP_006491391.1| PREDICTED: protein
            LHY-like isoform X3 [Citrus sinensis]
            gi|568876658|ref|XP_006491392.1| PREDICTED: protein
            LHY-like isoform X4 [Citrus sinensis]
          Length = 765

 Score =  477 bits (1227), Expect = e-131
 Identities = 331/771 (42%), Positives = 415/771 (53%), Gaps = 84/771 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G+D++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTK AVQ
Sbjct: 1    MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS-VRVN 1966
            IRSHAQKFFSKLE EA    V                          T  +   S +   
Sbjct: 61   IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQIGAK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-- 1792
            DGK  +S SSL    Q+  +E +P  ++ + G EK     E+  + N SEV  L QEA  
Sbjct: 121  DGKLRSSVSSLRCN-QVLDLEKEPISDRPN-GDEKPTYTIES-QKDNCSEVFILHQEAHC 177

Query: 1791 -SISLASKSSIPTSAVLTSSCTFREFIPSKNEI--------------------------- 1696
             S+S  +K+S+PT   L  SC  REF+PS  E+                           
Sbjct: 178  SSVSSVNKNSMPTPVGLRDSCNLREFVPSLKEVVNQDETRESYVTVELKANEKFGKPDAK 237

Query: 1695 ---SDHGSNKAPNLENRERTNE-----PKKLEKLGTLSTNEVQTNRSCPRHVPVHIVDGN 1540
                D+GS+K  NLEN   ++E      K+ +    L T EVQ  ++ PRHV VHI+DG+
Sbjct: 238  LALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADALPTAEVQATQNYPRHVNVHILDGS 297

Query: 1539 QGTCMQTQLSNMYLSSFF------YGNPNFFTNPTASSTTE-----WSSVHQSLPNASPP 1393
             GT  Q+        S F      +GNPN FTNP AS+TTE       S HQS P    P
Sbjct: 298  LGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQSFPTFH-P 356

Query: 1392 PVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS----- 1228
            P T F  +QD+Y+SFL+ISS F+SLIVSTL++NP          +FWP TN ETS     
Sbjct: 357  PFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETSADSPT 416

Query: 1227 ---GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCP------- 1078
               GGF  R MS  P+M                AHG+LPLC+ P H P F CP       
Sbjct: 417  CPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCA-PFHAP-FICPPACATAV 474

Query: 1077 SASDIGQVPFVNKEGKDNNP---------QDLDFSESPKPQHSVSRSPVLTSSTFEESGG 925
            S+ D  QVP    +  DN P          DL++SE+ + Q+S S+S  + +S  EES  
Sbjct: 475  SSMDTAQVPAAKTDKNDNTPPNPALKDHQPDLEYSEALQAQNSASKSLTVLTSDSEESAS 534

Query: 924  ARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALE---- 757
            A+    ELKA  HE K +   E HDS + K + +V R          SEVET+ALE    
Sbjct: 535  AKLKM-ELKATDHE-KNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALEKQEK 592

Query: 756  -KHELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
             K E KE D S  A D             +SWKEVSE GR+AF+AL SRE+LPQ+FSPP 
Sbjct: 593  GKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSFSPPH 652

Query: 579  DISHQ-RNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRE-RLINKNAEKGL 406
            D+  + +    E K+  N+KD D +L  +LN+KT      H  +EK     +  N  +GL
Sbjct: 653  DLKDKMQQDNVEDKQNGNKKDGDKSL-FDLNSKTWGSCFGHQEVEKSTVSGVENNGGEGL 711

Query: 405  MTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEG 253
            +T+  G+GKLKARR GFKPYKRCSVEA+E R+ N   + EE  PKRIR+EG
Sbjct: 712  LTIGLGHGKLKARRTGFKPYKRCSVEAKENRILNTGNQAEEKCPKRIRVEG 762


>ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Populus trichocarpa]
            gi|566158675|ref|XP_006386664.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|566158677|ref|XP_002301449.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345281|gb|ERP64460.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345282|gb|ERP64461.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345283|gb|EEE80722.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
          Length = 768

 Score =  473 bits (1218), Expect = e-130
 Identities = 324/779 (41%), Positives = 430/779 (55%), Gaps = 88/779 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G+D++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTYSAGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS-VRVN 1966
            IRSHAQKFFSKLE EA    V                          T      S     
Sbjct: 61   IRSHAQKFFSKLEKEAVAKGVPIGKALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-- 1792
            DGK LTS SS +  K +  +E +P PEK + G E+   AKE  D+ N SEV TL QEA  
Sbjct: 121  DGKLLTSTSSPHCRKVLD-LEKEPRPEKPN-GDERPTNAKENQDD-NCSEVFTLLQEAHC 177

Query: 1791 -SISLASKSSIPTSAVLTSSCTFREFIPSKNE---------------------------- 1699
             S++  +K+ +P   VL  + +FREF+PS  +                            
Sbjct: 178  SSVASVNKNCVPALEVLKKTSSFREFVPSPKKGNHDACNESFITVEHEANQKLDSSDANQ 237

Query: 1698 -ISDHGSNKAPNLENRERTNE-----PKKLEKLGTLSTNEVQTNRSCPRHVPVHIVDGNQ 1537
             + D+G+ KA   EN    +E      K  + +G+L T+E++  ++ PRHVPVH++DG+ 
Sbjct: 238  TVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMKAMQNYPRHVPVHVLDGSL 297

Query: 1536 GTCMQTQLSNMYLSSFFY------GNPNFFTNPTASSTTEW------SSVHQSLPNASPP 1393
            GTCM+T     +  S F+        P  +++PT S+TT+       SS+HQS P   PP
Sbjct: 298  GTCMETPSDLSFQDSMFHPVGDIPACPILYSHPTGSTTTDHPTNLPRSSMHQSFP-FFPP 356

Query: 1392 PVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETSG---- 1225
            P TP   NQD+Y+SFL+ISSTF+S +VSTL++NP          +FWP  N E+S     
Sbjct: 357  PFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVESSADSPA 416

Query: 1224 ----GFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS---- 1069
                GF    ++ +P+M                AHG+LP+C+ PLH   F CP AS    
Sbjct: 417  CAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICA-PLH-TAFACPPASATAI 474

Query: 1068 ---DIGQVPFVNKEGKDNNP---------QDLDFSESPKPQHSVSRSPVLTSSTFEESGG 925
               D  QVP    E K+  P         QDL+ SE+ + Q+S S+ P L+SS  EESGG
Sbjct: 475  QSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSASKPPTLSSSDSEESGG 534

Query: 924  ARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHEL 745
             + ++   K   HE   +   E  DS + K++ +V R          SE+ET+ALEK+E 
Sbjct: 535  TKLNTAP-KVTDHELN-SKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALEKNEK 592

Query: 744  -----KEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
                 KE D +H A +            ++SWKEVSEEGR+AF+AL +RE LPQ+FSPP 
Sbjct: 593  GKEEPKEADANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTRERLPQSFSPPH 652

Query: 579  DIS---HQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRE---RLINKNA 418
            D+    HQ+   EE K+  +EKD D +L L+LN+KT      +   EK     R +N + 
Sbjct: 653  DLKSKMHQKEDTEE-KKNPDEKDGDASL-LDLNSKTWGYCSGYQEGEKNAVVPRCVN-DG 709

Query: 417  EKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEASI 241
            E+GL+T+  G+G LKA   GFKPYKRCS+EA+E R+    G+ EE GPKR+RLE EAS+
Sbjct: 710  EEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMGTTGGQGEEKGPKRLRLEREASV 768


>dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|219687747|dbj|BAH09384.1|
            PnLHY1 [Populus nigra]
          Length = 768

 Score =  472 bits (1215), Expect = e-130
 Identities = 321/779 (41%), Positives = 428/779 (54%), Gaps = 88/779 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M TYS G+D++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTYSAGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA---HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFS-VRVN 1966
            IRSHAQKFFSKLE EA    V                          T      S     
Sbjct: 61   IRSHAQKFFSKLEKEAVAKGVPIGQALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAK 120

Query: 1965 DGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-- 1792
            DGK LTS SS +  K +  +E +P PEK + G E+   AKE  D+ N SEV TL QEA  
Sbjct: 121  DGKLLTSTSSPHCRKVLD-LEKEPRPEKPN-GDERPTNAKENQDD-NCSEVFTLLQEAHC 177

Query: 1791 -SISLASKSSIPTSAVLTSSCTFREFIPSKNE---------------------------- 1699
             S++  +K+ +P   VL  + +FREF+PS  +                            
Sbjct: 178  SSVASVNKNCVPALEVLKKTSSFREFVPSPKKGNDDACNESFITVEHEANQKLDSSDANQ 237

Query: 1698 -ISDHGSNKAPNLENRERTNE-----PKKLEKLGTLSTNEVQTNRSCPRHVPVHIVDGNQ 1537
             + D+G+ KA   EN    +E      K  + +G+L T+E+Q  ++ PRHVPVH++DG+ 
Sbjct: 238  TVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMQAMQNYPRHVPVHVLDGSL 297

Query: 1536 GTCMQTQLSNMYLSSFFY------GNPNFFTNPTASSTTEW------SSVHQSLPNASPP 1393
            GTC++T     +  S F+        P  +++P  S+TT+       SS+HQS P   PP
Sbjct: 298  GTCIETPSDLSFQDSMFHPVGDIPACPILYSHPAGSTTTDHPTNLPRSSMHQSFP-FFPP 356

Query: 1392 PVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETSG---- 1225
            P TP   NQD+Y+SFL+ISSTF+S +VSTL++NP          +FWP  N E+S     
Sbjct: 357  PFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVESSADSPA 416

Query: 1224 ----GFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS---- 1069
                GF    ++ +P+M                AHG+LP+C+ PLH   F CP AS    
Sbjct: 417  CAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICA-PLH-TAFACPPASATAI 474

Query: 1068 ---DIGQVPFVNKEGKDNNP---------QDLDFSESPKPQHSVSRSPVLTSSTFEESGG 925
               D  QVP    E K+  P         QDL+ SE+ + Q+S S+ P L+SS  EESGG
Sbjct: 475  QSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSASKPPTLSSSDSEESGG 534

Query: 924  ARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEK--- 754
             + ++        ++  +   E  DS + K++ +V R          SE+ET+ALEK   
Sbjct: 535  TKLNTGP--KVTDDELNSKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALEKTEK 592

Query: 753  --HELKEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
               E KE D +H A +            ++SWKEVSEEGR+AF+AL +REILPQ+FSPP 
Sbjct: 593  GKEEPKEADANHPASESNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTREILPQSFSPPH 652

Query: 579  DIS---HQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRE---RLINKNA 418
            D+    HQ+   EE K+  +EKD D +L L+LN+KT      +   EK     R +N + 
Sbjct: 653  DLKSKMHQKEDTEE-KKNPDEKDGDASL-LDLNSKTWGYCSGYQEGEKNAVVPRCVN-DG 709

Query: 417  EKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEASI 241
            E+GL+T+  G+G LKA   GFKPYKRCS+EA+E R+    G+ EE GPKR+RLE EAS+
Sbjct: 710  EEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMATTGGQGEEKGPKRLRLEREASV 768


>ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cicer arietinum]
            gi|502114154|ref|XP_004494879.1| PREDICTED: protein
            LHY-like isoform X2 [Cicer arietinum]
            gi|502114158|ref|XP_004494880.1| PREDICTED: protein
            LHY-like isoform X3 [Cicer arietinum]
          Length = 756

 Score =  443 bits (1139), Expect = e-121
 Identities = 315/776 (40%), Positives = 411/776 (52%), Gaps = 86/776 (11%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G++V+ KTRKPYTITKQRERWTE+EHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 2    MEAYSSGEEVVVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 61

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXI-----DTSAHTSFSVRV 1969
            IRSHAQKFFSKLE EA V                              +  A T  S   
Sbjct: 62   IRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVGAPTLHS-GA 120

Query: 1968 NDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA- 1792
              GK LT+ +SL+ ++ M   E +  PE  H   E+    KE  DE N S+V T+ QEA 
Sbjct: 121  KYGKPLTAFASLHGKEAMD-FEKESLPEM-HTDDERPTTVKENNDE-NCSKVCTILQEAP 177

Query: 1791 --SISLASKSSIPTSAVLTSSCTFREFIPSKNEI-------------------------- 1696
              S+S A+KSSI  S   T S TFREFIP   E+                          
Sbjct: 178  CLSVSSANKSSISMSVPQTKSFTFREFIPLVKEVIPQDKTNESFPATETENQMLEIGDGK 237

Query: 1695 ---SDHGSNKAPNLENR--ERTNEPKKLEKLGTLST-NEVQTNRSCPRHVPVHIVDGNQG 1534
                  G+ K   LEN    ++ + +K + L   ST +E+Q N++ PRH+ VH+VDGN G
Sbjct: 238  QTQKTDGTCKTSKLENTCSPKSVQTEKTDGLTYASTVDEMQGNQNYPRHITVHVVDGNLG 297

Query: 1533 TCMQTQLSNMYLSSFFY-------GNPNFFTNPTASSTTEW------SSVHQSLPNASPP 1393
            T  QT   +M +    +       G PN FTN  AS+T+E       SS+HQS P   P 
Sbjct: 298  TSTQTPSQDMLIQDSIFQPIGGINGQPNLFTNSAASNTSESQNNTARSSIHQSFP---PC 354

Query: 1392 PVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS----- 1228
            P+     N+D+YQSFLN+ STF+SLIVSTL+++P          +FWP  N +TS     
Sbjct: 355  PLFA-QHNEDDYQSFLNMPSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVDTSANSHA 413

Query: 1227 ---GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS---- 1069
               GGFP R +   P++                AHG+LPLC+ PLH   F CP AS    
Sbjct: 414  CSQGGFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCT-PLH-TAFACPPASATAV 471

Query: 1068 ---DIGQVPFVNKEGKDN--NPQ------DLDFSESPKPQHSVSRSPVLTSSTFEESGGA 922
               +IG+ P   ++G     NP        ++ +E+ + QHS S+SP ++SS  EE+G A
Sbjct: 472  QPANIGEAPPNTEQGDITLQNPSLKDQMLGVEETEALQAQHSASKSPAVSSSESEETGDA 531

Query: 921  RSSSNELKAAGHE-QKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHEL 745
            + +++      H+  +P S  E  DS + + + +V R          SE ET+ALEK E 
Sbjct: 532  KLNTSSKATTDHDISQPIS--ENPDSNKMEGRKQVDRSSCGSNTTSSSE-ETDALEKGEK 588

Query: 744  -----KEPDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPK 580
                 K PD  HLA D             +SWKEVSEEGR+AF AL SR++LPQ+FSPP 
Sbjct: 589  EKEDPKPPDADHLATDPSSRRYRSISNFIDSWKEVSEEGRLAFRALFSRQVLPQSFSPPH 648

Query: 579  DI---SHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLI-NKNAEK 412
            D+    HQ     +  + ++ KD  D+ + + N           G ++    + N N E+
Sbjct: 649  DLINKDHQMGNMTDNMQKTDYKDHLDSTKCSSNC---------DGFQQNLPFVQNNNEEE 699

Query: 411  GLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            GL+T+  G GKLK RR GFKPYKRC VEA+E RV     + EE GPKRIRLEGE S
Sbjct: 700  GLLTISLGQGKLKTRRTGFKPYKRCLVEAKENRVGTACNQVEEAGPKRIRLEGETS 755


>gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum crystallinum]
          Length = 739

 Score =  442 bits (1136), Expect = e-121
 Identities = 300/749 (40%), Positives = 407/749 (54%), Gaps = 59/749 (7%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G++++ KTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MEAYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXI-----DTSAHTSFSVRV 1969
            IRSHAQKFFSKLE EA V                                +   S  ++V
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIQQAIDIEIPPPRPKRKPSNPYPRKTGAAGSPSTQIKV 120

Query: 1968 NDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEAS 1789
             DG  +   SS +   Q+  +E +P PE    G +    AKET      SE  TLFQEA 
Sbjct: 121  KDGNKVPPGSS-HTANQLLDLEKEPPPENT-TGDDGKQNAKETCGAYKCSETFTLFQEAP 178

Query: 1788 ISLAS---KSSIPTSAVLTSSCTFREFIPSKNEISDHGSNKAPNLENRERTNEPKKLEKL 1618
             +L +   ++S  T+     SC   + +P K  +   GS+  P  + R+R    +KL+K 
Sbjct: 179  STLTASGNENSAITTGATRKSCKVDDPVPKKLLVDIDGSD-CPAADGRQRN---QKLDKT 234

Query: 1617 GTLST------NEVQTNRSCPRHVPVHIVDGNQGTCMQTQLSNM-YLSSFFY-----GNP 1474
             T+ T      NE+   ++ PRH PVHI+DG+ G C Q   S++ Y  S F+     G P
Sbjct: 235  DTVETAQNDTENEMHAVKNFPRHTPVHILDGSLGACSQALSSDVSYQESAFHRMGIPGYP 294

Query: 1473 NFFTNPTASSTTEWSS-----VHQSLPNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVS 1309
              F+NP  S+  E  +      +Q +  +  PP TPF +  ++Y SF+ +S+TF+SLIVS
Sbjct: 295  AIFSNPAVSAAVESQNSTSRTTNQQMFTSFHPPFTPFPNTPEDYSSFVQMSATFSSLIVS 354

Query: 1308 TLIKNPXXXXXXXXXXSFWPCTNGET--------SGGFPLRHMSPSPNMXXXXXXXXXXX 1153
             L++NP          SFWPC+N E         SGGFP R M+ +P+M           
Sbjct: 355  ALLQNPAAHAAASFAASFWPCSNMENSANCPAGLSGGFPPRPMNTAPSMAAIAGATVAAA 414

Query: 1152 XXXXXAHGMLPLCSLPLHHPGFTCPSAS------DIGQVPFVNKEGKDNNPQ-------- 1015
                 AHG+LPLC+ P+ H GF CP AS      ++ Q    NKE ++NN Q        
Sbjct: 415  TAWWAAHGLLPLCA-PV-HSGFNCPPASANAPLTNVAQSQATNKEREENNFQNPGSQVQQ 472

Query: 1014 -DLDFSESPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAAGHEQKPASIIEQHDSTEE 838
             D + SE+ +PQHS S+    +SS   +S GA+    E+    +E K  ++ EQ DS++ 
Sbjct: 473  PDQELSEALQPQHSASKPSATSSSDSGDSAGAKMEI-EIPTNDNEIKVPAMTEQKDSSKG 531

Query: 837  KTKTKVVRXXXXXXXXXXSEVETEALEKH-----ELKEPDLSHLAVD-HXXXXXXXXXXX 676
            K+K  V R          S+VET+AL+K+     E  EPD+S +A + +           
Sbjct: 532  KSKKLVDRSSCGSNTPSGSDVETDALQKNDKGKEEPLEPDISQIAGELNNRRNRIASNNL 591

Query: 675  NESWKEVSEEGRMAFEALLSREILPQNFSPPKDIS----HQRNGGEEGKETSNEKDEDDT 508
            N+SWKEVSE GR+AF+AL SRE LPQ+FSPP+D+S       NG E   + + E +ED +
Sbjct: 592  NDSWKEVSEGGRLAFQALFSRERLPQSFSPPQDVSIMDQVMNNGVERNGQNATETNEDAS 651

Query: 507  LQLNLNNKT-SKVRPDHSGLEKRERLINKNAEKGLMTMEFGNGKLKARRIGFKPYKRCSV 331
             QL+LN+ T      D   LE       +N +   +++    GK + RR GFKPYKRCSV
Sbjct: 652  -QLDLNSNTWESCSGDQGHLENTGLREKENGKDHFLSIGLAQGKPRDRRTGFKPYKRCSV 710

Query: 330  EAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            EA E R+ N + +++E  PKRIRLEGEAS
Sbjct: 711  EARESRL-NSNSQDQEKCPKRIRLEGEAS 738


>ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca subsp. vesca]
          Length = 778

 Score =  431 bits (1108), Expect = e-118
 Identities = 321/790 (40%), Positives = 416/790 (52%), Gaps = 100/790 (12%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M T+S G+D+I K RKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDTFSAGEDLIIKARKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEA-----HVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHT--SFSV 1975
            IRSHAQKFFSKLE EA      V                           +A T  +  V
Sbjct: 61   IRSHAQKFFSKLEKEAVSKGVPVGQSIDIDIPPPRPKRKPSNPYPRKSSEAAPTWSTSHV 120

Query: 1974 RVNDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE 1795
               DG  ++SASS +  KQ   +E     E+   G EK    KE  D+ N SEV T+  E
Sbjct: 121  GAKDGNLVSSASSSHC-KQAVDLEKGQLDERSSGG-EKPSYGKENKDK-NCSEVFTILSE 177

Query: 1794 A---SISLASKSSIPTSAVLTSSCTFREFIP----------------------------- 1711
            +   S+S   KSSI T   L ++CTFREF+P                             
Sbjct: 178  SHCSSVSSEIKSSIHTQVALRTACTFREFVPPVKKVIPRDGNESYVTIELKGNEILKKTD 237

Query: 1710 SKNEISDHGSNKAPNLENRERTN--EPKKLEKLG-TLSTNEVQTNRSCPRHVPVHIVDGN 1540
            +K  + D+ +++A  LEN       + +K + L  +L T+ +Q+  +CPR+VP+ I+DG+
Sbjct: 238  TKKIVQDNATSEASKLENTNALKLVQGEKADDLNCSLPTDGMQSTLTCPRNVPIQILDGS 297

Query: 1539 QGTCMQTQ---LSNMYLSSFFYG------NPNFFTNPTASSTTEW-----------SSVH 1420
             G C +T    LS  +  S F+        PN FTNP AS+TT             S + 
Sbjct: 298  GGECNRTTTPALSLSFQDSVFHPMGKIHVQPNLFTNPAASTTTTTTTTEHDSNVSRSCID 357

Query: 1419 QSLPNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTN 1240
            QS+P A PPP TPF  NQ++Y S  ++SSTF+SLIVS+L++NP          +FWP TN
Sbjct: 358  QSIP-AIPPPFTPFHHNQEDYHS--SLSSTFSSLIVSSLLQNPAAHAAASFAATFWPYTN 414

Query: 1239 GE--------TSGGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFT 1084
             E        ++G FP   M+  PNM                AHGMLPLC+ PL    F+
Sbjct: 415  LENKEGSPACSAGSFPSSLMNSPPNMAAIAAATVAAATAWWAAHGMLPLCA-PLQ-TSFS 472

Query: 1083 CP------SASDIGQVPFVNKE---------GKDNNPQDLDFSESPKPQHSVSRSPVLTS 949
            CP      ++ D  Q      E            +  Q+ + SE+ + QHS S+SP ++S
Sbjct: 473  CPVPMTGVASMDNDQAHAAEAEKGQGTIQGPSLQDQQQEPEHSEAVQAQHSPSKSPTISS 532

Query: 948  STFEESGGARSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVET 769
            S   E+GGA+      KA  +E+  AS  E  D  + K+K +V R          SEVET
Sbjct: 533  SD-SENGGAKPEIGS-KADDNEKDIAST-EVQDLNKAKSKKQVDRSSCGSNTTSCSEVET 589

Query: 768  EALEKHE-----LKEPDLSHLAVDHXXXXXXXXXXXN--------ESWKEVSEEGRMAFE 628
            + LEK E     LK+PDL+  +              +        +SWKEVSEEGRMAF+
Sbjct: 590  DVLEKQEKGEEELKQPDLNPASESSYRRTRSITNMSDSWKDKHMNDSWKEVSEEGRMAFQ 649

Query: 627  ALLSREILPQNFSPPKDISHQRNGGE-EGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGL 451
            AL SRE+LPQ+FSPP D+  + N    EG++ S EKD    L L+LN+K +     H  +
Sbjct: 650  ALFSREVLPQSFSPPPDVKDKGNQDTIEGQQDSGEKD-GRALMLDLNSK-AWAPFCHPEV 707

Query: 450  EK-RERLINKNAEKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGP 274
            EK        N  +GL+T+  G GKLK+RR GFKPYKRCSVEA E RV N     EE GP
Sbjct: 708  EKIASPPGGHNDAEGLLTLGLGYGKLKSRRTGFKPYKRCSVEANENRVANAGSHCEEKGP 767

Query: 273  KRIRLEGEAS 244
            KR+RLEGEAS
Sbjct: 768  KRLRLEGEAS 777


>gb|AHW98794.1| LATE ELONGATED HYPOCOTYL [Cicer arietinum]
          Length = 738

 Score =  422 bits (1084), Expect = e-115
 Identities = 307/760 (40%), Positives = 400/760 (52%), Gaps = 70/760 (9%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G++V+ KTRKPYTITKQRERWTE+EHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MEAYSSGEEVVVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXI-----DTSAHTSFSVRV 1969
            IRSHAQKFFSKLE EA V                              +  A T  S   
Sbjct: 61   IRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVGAPTLHS-GA 119

Query: 1968 NDGKHLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA- 1792
              GK LT+ +SL+ ++ M   E +P PE  H   E+    KE  DE N S+V T+ QEA 
Sbjct: 120  KYGKPLTAFASLHGKEAMD-FEKEPLPEM-HTDDERPTTVKENNDE-NCSKVCTILQEAP 176

Query: 1791 --SISLASKSSIPTSAVLTSSCTFREFIPSKNEI--SDHGSNKAPNLENRERTNE---PK 1633
              S+S A+KSSI  S   T S TFREFIP   E+   D  +   P  E   +  E    K
Sbjct: 177  CLSVSSANKSSISMSVPQTKSFTFREFIPLVKEVIPQDKTNESFPATETENQMLEIGDGK 236

Query: 1632 KLEKL-GTLSTNEVQTNRSCPRHVPVHIVDG----------NQGTCMQTQLSNMYLSSFF 1486
            + +K  GT  T++++ N   P+ V     DG             T  QT   +M +    
Sbjct: 237  QTQKTDGTCKTSKLE-NTCSPKSVQTEKTDGLTYASTVDEMQGNTSTQTPSQDMLIQDSI 295

Query: 1485 Y-------GNPNFFTNPTASSTTEW------SSVHQSLPNASPPPVTPFLSNQDNYQSFL 1345
            +       G PN FTN  AS+T+E       SS+HQS P   P P+     N+D+YQSFL
Sbjct: 296  FQPIGGINGQPNLFTNSAASNTSESQNNTARSSIHQSFP---PCPLFA-QHNEDDYQSFL 351

Query: 1344 NISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS--------GGFPLRHMSPSPN 1189
            N+ STF+SLIVSTL+++P          +FWP  N +TS        GGFP R +   P+
Sbjct: 352  NMPSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVDTSANSHACSQGGFPSRQIGSPPS 411

Query: 1188 MXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSAS-------DIGQVPFVNKEGK 1030
            +                AHG+LPLC+ PLH   F CP AS       +IG+ P   ++G 
Sbjct: 412  VTAIAAATVAAATAWWAAHGLLPLCA-PLH-TAFACPPASATAVQPANIGEAPPNTEQGD 469

Query: 1029 DN--NPQ------DLDFSESPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAAGHE-QK 877
                NP        ++ +E+ + QHS S+SP ++SS  EE+G A+ +++      H+  +
Sbjct: 470  ITLQNPSLKDQMLGVEETEALQAQHSASKSPAVSSSESEETGDAKLNTSSKATTDHDISQ 529

Query: 876  PASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHEL-----KEPDLSHLAVD 712
            P S  E  DS + + + +V R          SE ET+ALEK E      K PD  HLA D
Sbjct: 530  PIS--ENPDSNKMEGRKQVDRSSCGSNTTSSSE-ETDALEKGEKEKEDPKPPDADHLATD 586

Query: 711  HXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPPKDI---SHQRNGGEEGK 541
                         +SWKEVSEEGR+AF AL SR++LPQ+ SPP D+    HQ     +  
Sbjct: 587  PSSRRYRSISNFIDSWKEVSEEGRLAFRALFSRQVLPQSLSPPHDLINKDHQMGDMTDNM 646

Query: 540  ETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLI-NKNAEKGLMTMEFGNGKLKARR 364
            + ++ KD  D+ + + N           G ++    + N N E+GL+T+  G GKLK RR
Sbjct: 647  QKTDYKDHLDSTKCSSNC---------DGFQQNLPFVQNNNEEEGLLTISLGQGKLKTRR 697

Query: 363  IGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
             GFKPYKRC VEA+E RV     + EE GPKRIRLEGE S
Sbjct: 698  TGFKPYKRCLVEAKENRVGTACNQVEEAGPKRIRLEGETS 737


>ref|NP_001235187.1| late elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max] gi|158999368|gb|ABW87008.1| late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 [Glycine max]
          Length = 749

 Score =  421 bits (1081), Expect = e-114
 Identities = 308/774 (39%), Positives = 408/774 (52%), Gaps = 84/774 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G++V+ KTRKPYTITKQRERWTEEEHNRFLEALKL+GRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXI----DTSAHTSFSVRVN 1966
            IRSHAQKFF+KLE EA V                                  TS      
Sbjct: 61   IRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRIGTTSLHSGAK 120

Query: 1965 DGK-HLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE-- 1795
            DGK +L  +S +    Q   ++ +P PEK H   E L   KE  DE N ++V TL QE  
Sbjct: 121  DGKLNLVESSHV---NQALDLKKEPLPEK-HDLDEGLTTVKENKDE-NHAKVFTLLQEVP 175

Query: 1794 -ASISLASKSSIPTSAVLTSSCTFREFIPS----------------------KNEISD-- 1690
             +S+S A++SSI  S  L + C F+E  PS                      K EI+D  
Sbjct: 176  CSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFVTVEPENGKLEINDGK 235

Query: 1689 --HGSNKAPNLENRERTN----EPKKLEKLGT-LSTNEVQTNRSCPRHVPVHIVDGNQGT 1531
              +G++K   LE+ +  +    + +K + L   L+ + +Q N++ PRHV VH+VDGN GT
Sbjct: 236  QTNGTSKDSRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNYPRHVTVHVVDGNLGT 295

Query: 1530 CMQTQLSNMYLSSFFY-------GNPNFFTNPTASSTTEW------SSVHQSLPNASPPP 1390
              Q    +M      +       G  N FTN   S+T+E       SSVHQS       P
Sbjct: 296  NTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTARSSVHQSFL-----P 350

Query: 1389 VTPFLS-NQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS----- 1228
              PF   NQD+YQSFL++SSTF++LIVSTL++NP          +FWP  N ETS     
Sbjct: 351  YPPFTQHNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWPYANPETSANSPR 410

Query: 1227 ---GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSA----- 1072
               GGF  R +   P++                AHG+LPLC+ PLH   F CP++     
Sbjct: 411  CSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCA-PLH-TSFACPASVTTVP 468

Query: 1071 -SDIGQVPFVNKEGKDNNPQ---------DLDFSESPKPQHSVSRSPVLTSSTFEESGGA 922
              + G+ P +  E +    Q         D ++SE+ + QHS S+SP  T S   ESG A
Sbjct: 469  SMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAATLSD-SESGDA 527

Query: 921  RSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHELK 742
            + +++  K   HE    +I E  DS + K +  V R          S+VET+ALEK E  
Sbjct: 528  KLNTSS-KVTDHETNK-TISEHLDSNKTKGRKPVDRSSCGSNTASSSDVETDALEKGEKG 585

Query: 741  E-----PDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPP-- 583
            +     PD + LA++             +SWKEVSEEGR+AF+AL SRE+LPQ+FSPP  
Sbjct: 586  KEEPEIPDANQLAIEFSNRRRSVSNLT-DSWKEVSEEGRLAFQALFSREVLPQSFSPPHA 644

Query: 582  -KDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKNAEKGL 406
             K+  HQ +   + K+  ++KDED      L+ K  K   ++  ++K    +  N  +GL
Sbjct: 645  LKNTDHQMDNANDNKQNIDDKDED------LDGK--KCSSNYEAMQKNLLFVENN--EGL 694

Query: 405  MTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            +T+  G GKLK  R GFKPYKRCS+EA+E RV   S + EE G KRIRLEGE S
Sbjct: 695  LTIGLGQGKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGCKRIRLEGETS 748


>ref|XP_006598673.1| PREDICTED: late elongated hypocotyl and circadian clock
            associated-1-like protein 1 isoform X1 [Glycine max]
            gi|571523805|ref|XP_006598674.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X2 [Glycine max]
            gi|571523809|ref|XP_006598675.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X3 [Glycine max]
            gi|571523813|ref|XP_006598676.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X4 [Glycine max]
            gi|571523816|ref|XP_006598677.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X5 [Glycine max]
            gi|571523820|ref|XP_006598678.1| PREDICTED: late
            elongated hypocotyl and circadian clock associated-1-like
            protein 1 isoform X6 [Glycine max]
          Length = 750

 Score =  418 bits (1074), Expect = e-114
 Identities = 305/774 (39%), Positives = 406/774 (52%), Gaps = 84/774 (10%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M  YS G++V+ KTRKPYTITKQRERWTEEEHNRFLEALKL+GRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXI----DTSAHTSFSVRVN 1966
            IRSHAQKFF+KLE EA V                                  TS      
Sbjct: 61   IRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRIGTTSLHSGAK 120

Query: 1965 DGK-HLTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQE-- 1795
            DGK +L  +S +    Q   ++ +P PEK H   E L   KE  DE N ++V TL QE  
Sbjct: 121  DGKLNLVESSHV---NQALDLKKEPLPEK-HDLDEGLTTVKENKDE-NHAKVFTLLQEVP 175

Query: 1794 -ASISLASKSSIPTSAVLTSSCTFREFIPS----------------------KNEISD-- 1690
             +S+S A++SSI  S  L + C F+E  PS                      K EI+D  
Sbjct: 176  CSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFVTVEPENGKLEINDGK 235

Query: 1689 --HGSNKAPNLENRERTN----EPKKLEKLGT-LSTNEVQTNRSCPRHVPVHIVDGNQGT 1531
              +G++K   LE+ +  +    + +K + L   L+ + +Q N++ PRHV VH+VDGN GT
Sbjct: 236  QTNGTSKDSRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNYPRHVTVHVVDGNLGT 295

Query: 1530 CMQTQLSNMYLSSFFY-------GNPNFFTNPTASSTTEW------SSVHQSLPNASPPP 1390
              Q    +M      +       G  N FTN   S+T+E       SSVHQS       P
Sbjct: 296  NTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTARSSVHQSFL-----P 350

Query: 1389 VTPFLS-NQDNYQSFLNISSTFTSLIVSTLIKNPXXXXXXXXXXSFWPCTNGETS----- 1228
              PF   NQD+YQSFL++SSTF++LIVSTL++NP          +FWP  N ETS     
Sbjct: 351  YPPFTQHNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWPYANPETSANSPR 410

Query: 1227 ---GGFPLRHMSPSPNMXXXXXXXXXXXXXXXXAHGMLPLCSLPLHHPGFTCPSA----- 1072
               GGF  R +   P++                AHG+LPLC+ PLH   F CP++     
Sbjct: 411  CSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCA-PLH-TSFACPASVTTVP 468

Query: 1071 -SDIGQVPFVNKEGKDNNPQ---------DLDFSESPKPQHSVSRSPVLTSSTFEESGGA 922
              + G+ P +  E +    Q         D ++SE+ + QHS S+SP    S   ESG A
Sbjct: 469  SMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAAILSD-SESGDA 527

Query: 921  RSSSNELKAAGHEQKPASIIEQHDSTEEKTKTKVVRXXXXXXXXXXSEVETEALEKHELK 742
            + +++  K   HE    +I E  DS + K +  V R          S+VET+ALEK E  
Sbjct: 528  KLNTSS-KVTDHETNK-TISEHLDSNKTKGRKPVDRSSCGSNTASSSDVETDALEKGEKG 585

Query: 741  E-----PDLSHLAVDHXXXXXXXXXXXNESWKEVSEEGRMAFEALLSREILPQNFSPP-- 583
            +     PD + LA++             +SWKEVSEEGR+AF+AL SRE+LPQ+FSPP  
Sbjct: 586  KEEPEIPDANQLAIEFSNRRRSVSNLT-DSWKEVSEEGRLAFQALFSREVLPQSFSPPHA 644

Query: 582  -KDISHQRNGGEEGKETSNEKDEDDTLQLNLNNKTSKVRPDHSGLEKRERLINKNAEKGL 406
             K+  HQ +   + K+  ++KDED        + + K   ++  ++K    +  N  +GL
Sbjct: 645  LKNTDHQMDNANDNKQNIDDKDED-------LDGSKKCSSNYEAMQKNLLFVENN--EGL 695

Query: 405  MTMEFGNGKLKARRIGFKPYKRCSVEAEERRVRNGSGKEEENGPKRIRLEGEAS 244
            +T+  G GKLK  R GFKPYKRCS+EA+E RV   S + EE G KRIRLEGE S
Sbjct: 696  LTIGLGQGKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGCKRIRLEGETS 749


>ref|XP_004140527.1| PREDICTED: protein LHY-like [Cucumis sativus]
          Length = 733

 Score =  417 bits (1072), Expect = e-113
 Identities = 289/739 (39%), Positives = 394/739 (53%), Gaps = 53/739 (7%)
 Frame = -2

Query: 2313 MGTYSPGDDVIFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQQIEEHIGTKTAVQ 2134
            M   S G+D++FKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQ+IEEHIGTKTAVQ
Sbjct: 1    MDPNSSGEDLVFKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 2133 IRSHAQKFFSKLEGEAHVXXXXXXXXXXXXXXXXXXXXXXXXIDTSAHTSFSVRVNDGKH 1954
            IRSHAQKFFSKLE EA V                                  +  NDGK 
Sbjct: 61   IRSHAQKFFSKLEKEALVKGIPVGQTLDIDIPPPRPKRKPSNPYPRKTPISKLGANDGKV 120

Query: 1953 LTSASSLYPEKQMQGMENDPSPEKKHAGTEKLVEAKETLDEGNGSEVLTLFQEA-SISLA 1777
            LT  SS    KQ+  +E +P  E   +G E+    K+  D+ N SEV TL +EA SIS  
Sbjct: 121  LTLVSSSQ-RKQILDLEKEPLNEGT-SGEEQATIEKDAHDD-NYSEVFTLSREANSISWK 177

Query: 1776 SKSSIPTSAVLTSSCTFREFIPS-KNEISDHGSNKAPNLE----NRERTNEPKKLEKLG- 1615
            + + +P+   L  SC FREF+PS K  + D G  K   +E    ++E++   +K E L  
Sbjct: 178  NTNCVPSQVKLNDSCAFREFVPSLKEPLQDKGPGKVLEMEISSTSQEKSMPAEKKEALSC 237

Query: 1614 TLSTNEVQTNRSCPRHVPVHIVDGNQGTCMQTQLSNMYLSSFFY-------GNPNFFTNP 1456
             LS +E+Q   + PRHVPVH+VDG+ G  +Q  +++  L    +       G  N   NP
Sbjct: 238  VLSGDEMQAAHNYPRHVPVHVVDGSLGANVQGSVTDTLLQESTFHPAMEVRGEHNIIGNP 297

Query: 1455 TASSTTEWSS-----VHQSLPNASPPPVTPFLSNQDNYQSFLNISSTFTSLIVSTLIKNP 1291
            +   + E  +     V+QS P   P P T    NQ++Y+S L++SS+F++L+VSTL +NP
Sbjct: 298  SDCVSFEHQNNAPRCVYQSYPTIHPTPFTLLRPNQEHYKSLLHMSSSFSNLVVSTLQQNP 357

Query: 1290 XXXXXXXXXXSFWPCTNGETSGGFPL--------RHMSPSPNMXXXXXXXXXXXXXXXXA 1135
                      + WP  N ETS   P+        + M+P+P+M                A
Sbjct: 358  AAHAIASLTATCWPYVNPETSVDSPVCDKEGSGTKQMNPTPSMEAIAAATVAAATAWWAA 417

Query: 1134 HGMLPLCSLPLHHP----GFTCP--SASDIGQVPFVNKEGKD------------NNPQDL 1009
            HG+LPLC+ P H      G + P   +SD  Q    N E KD            N   D 
Sbjct: 418  HGLLPLCA-PFHSAFPSAGVSAPVVQSSDTCQ----NLESKDKAESSQQIVALQNQQLDA 472

Query: 1008 DFSESPKPQHSVSRSPVLTSSTFEESGGARSSSNELKAAGHEQKPASIIEQHDSTEEKTK 829
            + SE+   QHS S+ P  +SS  E SGGA  ++N+     H++K  + +E HDS + K  
Sbjct: 473  EQSEALTAQHSGSKLPTHSSSDSEGSGGA--NANDTVKPAHDEKTPAEVEFHDSNKGKRG 530

Query: 828  TKVVRXXXXXXXXXXSEVETEALEKHELKEPD------LSHLAVDHXXXXXXXXXXXNES 667
             +V R          S+ E +A E ++ +E +      ++  AV+            +ES
Sbjct: 531  KQVDRSSCGSNTPSGSDQEIDATENNDKEEKEEENDLEMNRPAVELSNRRNRSISNTSES 590

Query: 666  WKEVSEEGRMAFEALLSREILPQNFSPPKDISHQRNGGEEGKETSNEKDEDDTLQ-LNLN 490
            WKEVS+EGR+AF+AL +R++LPQ+FSPP D+ ++    E  ++ S+  D+D     L+LN
Sbjct: 591  WKEVSDEGRLAFQALFTRDVLPQSFSPPYDVENENKASENVEKDSHVVDKDSGASVLDLN 650

Query: 489  NKTSKVRPDHSGLEKRERLIN-KNAEKGLMTMEFGNGKLKARRIGFKPYKRCSVEAEERR 313
             KT      H  +E+    I   N E  L+T+  GNG  KA R GFKPYKRCSVEA+E+R
Sbjct: 651  GKTCG-SFSHQSMERDTSAIGINNGEGELLTIGLGNGTPKACRTGFKPYKRCSVEAKEKR 709

Query: 312  VRNGSGKEEENGPKRIRLE 256
            +   S   EE G KR+RLE
Sbjct: 710  MTTSSNHCEEGGQKRLRLE 728