BLASTX nr result

ID: Akebia23_contig00017961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00017961
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...    70   4e-10
ref|XP_007038103.1| DNA binding protein, putative isoform 4, par...    66   4e-09
ref|XP_007038102.1| Basic helix-loop-helix DNA-binding superfami...    66   4e-09
ref|XP_007038100.1| Basic helix-loop-helix DNA-binding superfami...    66   4e-09
ref|XP_007209284.1| hypothetical protein PRUPE_ppa008085mg [Prun...    59   7e-07

>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 48/113 (42%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
 Frame = -1

Query: 316 QLPSFLLDSVFLPINPSKMSGFMEEGYINXXXXXXXXXXXXXXXXQENPIHDVRVLE--- 146
           Q P FLLDSVFLP  P KMSGFMEEG                    +  +H+   L+   
Sbjct: 7   QHPPFLLDSVFLPSTPIKMSGFMEEGNTTTCFSQFFPSESLHEVPADARVHESTSLQHSS 66

Query: 145 ---CSDIGSSVIEKQKTDLSSMVVDLESADQVTQK--DTQMENKRKNRDGSCL 2
               SD    V +K  TD SS+V  LE  +QVTQK    + E KRK+RDGS L
Sbjct: 67  KVTLSDNEPCVTQKLSTDSSSVVDRLELGEQVTQKVAPIERERKRKSRDGSSL 119


>ref|XP_007038103.1| DNA binding protein, putative isoform 4, partial [Theobroma cacao]
           gi|508775348|gb|EOY22604.1| DNA binding protein,
           putative isoform 4, partial [Theobroma cacao]
          Length = 292

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
 Frame = -1

Query: 304 FLLDSVFLPINPSKMSGFMEEGYINXXXXXXXXXXXXXXXXQENP-IHDVRVLE------ 146
           FLLDS+FLP  P+K+SGFMEEG IN                  +P  H+   L+      
Sbjct: 11  FLLDSIFLPNTPTKVSGFMEEGNINSNCFSQFYPPEPIQESPLDPKFHESSCLDHSSKLA 70

Query: 145 CSDIGSSVIEKQKTDLSSMVVDLESADQVTQKDTQMENKRKNRDGSCL 2
            SD   SV +KQ TD S++V  LES +QVTQ  T  + KRK R  + L
Sbjct: 71  HSDNEPSVTKKQSTDDSTVVDKLESGEQVTQNVTLTDRKRKTRSRTTL 118


>ref|XP_007038102.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
           isoform 3, partial [Theobroma cacao]
           gi|508775347|gb|EOY22603.1| Basic helix-loop-helix
           DNA-binding superfamily protein, putative isoform 3,
           partial [Theobroma cacao]
          Length = 411

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
 Frame = -1

Query: 304 FLLDSVFLPINPSKMSGFMEEGYINXXXXXXXXXXXXXXXXQENP-IHDVRVLE------ 146
           FLLDS+FLP  P+K+SGFMEEG IN                  +P  H+   L+      
Sbjct: 74  FLLDSIFLPNTPTKVSGFMEEGNINSNCFSQFYPPEPIQESPLDPKFHESSCLDHSSKLA 133

Query: 145 CSDIGSSVIEKQKTDLSSMVVDLESADQVTQKDTQMENKRKNRDGSCL 2
            SD   SV +KQ TD S++V  LES +QVTQ  T  + KRK R  + L
Sbjct: 134 HSDNEPSVTKKQSTDDSTVVDKLESGEQVTQNVTLTDRKRKTRSRTTL 181


>ref|XP_007038100.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590670601|ref|XP_007038101.1| Basic helix-loop-helix
           DNA-binding superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508775345|gb|EOY22601.1| Basic
           helix-loop-helix DNA-binding superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508775346|gb|EOY22602.1| Basic helix-loop-helix
           DNA-binding superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 348

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 45/108 (41%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
 Frame = -1

Query: 304 FLLDSVFLPINPSKMSGFMEEGYINXXXXXXXXXXXXXXXXQENP-IHDVRVLE------ 146
           FLLDS+FLP  P+K+SGFMEEG IN                  +P  H+   L+      
Sbjct: 11  FLLDSIFLPNTPTKVSGFMEEGNINSNCFSQFYPPEPIQESPLDPKFHESSCLDHSSKLA 70

Query: 145 CSDIGSSVIEKQKTDLSSMVVDLESADQVTQKDTQMENKRKNRDGSCL 2
            SD   SV +KQ TD S++V  LES +QVTQ  T  + KRK R  + L
Sbjct: 71  HSDNEPSVTKKQSTDDSTVVDKLESGEQVTQNVTLTDRKRKTRSRTTL 118


>ref|XP_007209284.1| hypothetical protein PRUPE_ppa008085mg [Prunus persica]
           gi|462405019|gb|EMJ10483.1| hypothetical protein
           PRUPE_ppa008085mg [Prunus persica]
          Length = 346

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310 PSFLLDSVFLPINPSKMS--GFMEEGYINXXXXXXXXXXXXXXXXQENPI-HDVRVLECS 140
           P+FLLDS+FLP  P+ ++        Y +                    + H    +  S
Sbjct: 8   PAFLLDSIFLPYTPNNINIDDHFSPSYPSEPLIQEVHNTDSRAVESSCTVDHSSAKVSLS 67

Query: 139 DIGSSVIEKQKTDLSSMVVDLESADQVTQKDTQMENKRKNRDGSCL 2
           D   SV +KQ T+ S++V  LE+ +QVTQK T M+ KRKNR+GS L
Sbjct: 68  DNEPSVTKKQSTESSTVVDKLETGEQVTQKVTSMDKKRKNRNGSSL 113


Top