BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00017674
         (1101 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-101
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   376   e-101
ref|XP_007051476.1| Pentatricopeptide repeat (PPR-like) superfam...   374   e-101
gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]     372   e-100
ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containi...   369   1e-99
ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citr...   367   5e-99
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   363   5e-98
ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, part...   357   5e-96
ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containi...   351   4e-94
ref|XP_007220019.1| hypothetical protein PRUPE_ppa003879mg [Prun...   348   2e-93
ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containi...   348   2e-93
ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containi...   344   3e-92
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   340   5e-91
ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [A...   336   9e-90
ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutr...   327   4e-87
ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Caps...   322   2e-85
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   320   9e-85
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ...   318   3e-84
ref|XP_004492340.1| PREDICTED: pentatricopeptide repeat-containi...   315   2e-83
ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...   314   4e-83

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial [Vitis vinifera]
            gi|296089757|emb|CBI39576.3| unnamed protein product
            [Vitis vinifera]
          Length = 586

 Score =  376 bits (965), Expect = e-101
 Identities = 177/257 (68%), Positives = 211/257 (82%), Gaps = 2/257 (0%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEMEEN V+PNDVTYGV+IEAYCKEKKSGE LNLLDDMLEKKY+PSSALCC+VID
Sbjct: 330  AVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVID 389

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            +LCE+GKVE AC++WKKLL+KNCTPDNAI+STLI+W+ K+GK+WEARKLFDEFEKGSIPS
Sbjct: 390  MLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPS 449

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
             LTYN LI+GMCE GEL EA RLWD+MVEKGCVPN F+YNMLI GFCK G A EG+R+ E
Sbjct: 450  TLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVME 509

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVT-- 715
            EML+  C+PNK TY+IL+E LY  G+E E + +L +A+S GG+  D +CW +F  K    
Sbjct: 510  EMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRGGV--DAECWGVFLAKFVNG 567

Query: 716  GESDSWRHVFDGILSET 766
            G  D      D IL E+
Sbjct: 568  GNIDVEGAKIDRILVES 584



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKY--VPSSALCCKV 175
           AI+    +   G+ P+  ++  ++    + K+  + ++L+     KK+  VP+   C  +
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247

Query: 176 IDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGS 352
           +  LC+   ++ A  V +++      P+    +T++     KG +  AR++F E  ++G 
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P   TY  L+ G C++G   +A ++ D+M E    PN  +Y ++I  +CK  K+ E + 
Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
           + ++MLEK+ +P+      +++ L   G  E A +L
Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
 Frame = +2

Query: 233 LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISG 391
           L+ KNC       P+    + L+  + KK  I  A ++ +E    G IP+V+TY T++ G
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 392 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 571
              +G++  A R++ +++++G VP+  +Y +L++G+CK G+  + V++ +EM E    PN
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 572 KFTYSILVESLYGSGMEEEASKLL 643
             TY +++E+        E   LL
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLL 369


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  376 bits (965), Expect = e-101
 Identities = 171/238 (71%), Positives = 205/238 (86%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEMEEN V+PNDVTYGV+IEAYCKEKKSGE LNLLDDMLEKKY+PSSALCC+VID
Sbjct: 330  AVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVID 389

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            +LCE+GKVE AC++WKKLL+KNCTPDNAI+STLI+W+ K+GK+WEARKLFDEFEKGSIPS
Sbjct: 390  MLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPS 449

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
             LTYN LI+GMCE GEL EA RLWD+MVEKGCVPN F+YNMLI GFCK G A EG+R+ E
Sbjct: 450  TLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVME 509

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVT 715
            EML+  C+PNK TY+IL+E LY  G+E E + +L +A+S GG+  D +CW +F  K +
Sbjct: 510  EMLDNGCLPNKATYAILLEGLYELGLEGEVTNVLSMASSRGGV--DAECWGVFLAKTS 565



 Score = 90.1 bits (222), Expect = 1e-15
 Identities = 53/216 (24%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKY--VPSSALCCKV 175
           AI+    +   G+ P+  ++  ++    + K+  + ++L+     KK+  VP+   C  +
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247

Query: 176 IDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGS 352
           +  LC+   ++ A  V +++      P+    +T++     KG +  AR++F E  ++G 
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P   TY  L+ G C++G   +A ++ D+M E    PN  +Y ++I  +CK  K+ E + 
Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
           + ++MLEK+ +P+      +++ L   G  E A +L
Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACEL 403



 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
 Frame = +2

Query: 233 LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISG 391
           L+ KNC       P+    + L+  + KK  I  A ++ +E    G IP+V+TY T++ G
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 392 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 571
              +G++  A R++ +++++G VP+  +Y +L++G+CK G+  + V++ +EM E    PN
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 572 KFTYSILVESLYGSGMEEEASKLL 643
             TY +++E+        E   LL
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLL 369


>ref|XP_007051476.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao] gi|508703737|gb|EOX95633.1| Pentatricopeptide
            repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 545

 Score =  374 bits (960), Expect = e-101
 Identities = 173/255 (67%), Positives = 208/255 (81%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEMEENGV PN+VTYGVMIEA+CKEKKSGEALNL DDMLE+KY+PSS+LCCKVID
Sbjct: 287  AVKVMDEMEENGVVPNEVTYGVMIEAFCKEKKSGEALNLFDDMLERKYIPSSSLCCKVID 346

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLC++GKVEE C +WKK+L+ +C PDNAI STLI+W+ KKGK+WEARK+FDEFEKGS+PS
Sbjct: 347  VLCDEGKVEEGCYLWKKMLKNDCLPDNAILSTLIHWLCKKGKVWEARKMFDEFEKGSVPS 406

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCERGEL EAG+LWDDMVEKGC PNVF+YNMLI GFCK G   EG+RI E
Sbjct: 407  LLTYNTLINGMCERGELNEAGKLWDDMVEKGCNPNVFTYNMLIKGFCKMGNVMEGIRILE 466

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C PNK TYS+L+E L   G E E  K++ +A S G +  D   W +F  K+ G+
Sbjct: 467  EMLDKGCFPNKVTYSVLIEGLQDMGKEGEVGKVVSMAMSRGRV--DGSSWDLFLTKIVGK 524

Query: 722  SDSWRHVFDGILSET 766
             DS   V D +L E+
Sbjct: 525  LDSGVDVLDQLLLES 539



 Score =  100 bits (249), Expect = 1e-18
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 1/203 (0%)
 Frame = +2

Query: 35  GVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVIDVLCEDGKVEEA 214
           GV PN  T  ++I+A C+E     A  + D+M     VP+      ++      G ++ A
Sbjct: 193 GVVPNVFTCNILIKALCQENDVEAAYKVFDEMPSMGMVPNVVTYTTILGGYVARGDMKNA 252

Query: 215 CDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISG 391
             V+ +LL +   PD    + L+    + GK  EA K+ DE E+ G +P+ +TY  +I  
Sbjct: 253 KRVFGELLDRGWVPDATTYTVLMDGYCRLGKFSEAVKVMDEMEENGVVPNEVTYGVMIEA 312

Query: 392 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 571
            C+  +  EA  L+DDM+E+  +P+      +I+  C  GK  EG  ++++ML+ +C+P+
Sbjct: 313 FCKEKKSGEALNLFDDMLERKYIPSSSLCCKVIDVLCDEGKVEEGCYLWKKMLKNDCLPD 372

Query: 572 KFTYSILVESLYGSGMEEEASKL 640
               S L+  L   G   EA K+
Sbjct: 373 NAILSTLIHWLCKKGKVWEARKM 395



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 33/106 (31%), Positives = 60/106 (56%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G +P+V T N LI  +C+  +++ A +++D+M   G VPNV +Y  ++ G+   G     
Sbjct: 193 GVVPNVFTCNILIKALCQENDVEAAYKVFDEMPSMGMVPNVVTYTTILGGYVARGDMKNA 252

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
            R+F E+L++  VP+  TY++L++     G   EA K++     +G
Sbjct: 253 KRVFGELLDRGWVPDATTYTVLMDGYCRLGKFSEAVKVMDEMEENG 298


>gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]
          Length = 531

 Score =  372 bits (955), Expect = e-100
 Identities = 181/254 (71%), Positives = 207/254 (81%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            AIK+MDEMEENGV PNDVTYGVMIEAYCK  KSGEALNLL+DMLE KY+PSSALCCKVID
Sbjct: 280  AIKVMDEMEENGVLPNDVTYGVMIEAYCKGNKSGEALNLLEDMLEGKYIPSSALCCKVID 339

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLC+ GKVE+AC++WK+LL+ NCTPDNAISSTLIYW+ KKGK+WEARKLFD+FEKGSIPS
Sbjct: 340  VLCQQGKVEDACELWKRLLKNNCTPDNAISSTLIYWLCKKGKVWEARKLFDQFEKGSIPS 399

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCE GEL EAGRLWDDMVEKGC PN F+YNMLI GFC  GKA EG+RI E
Sbjct: 400  ILTYNTLIAGMCEEGELCEAGRLWDDMVEKGCAPNSFTYNMLIKGFCNTGKAEEGIRILE 459

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML K C P K TY +L++ L     E E +K+L +A SS  I  DNDCW IF   + G+
Sbjct: 460  EMLCKGCSPGKSTYGMLIDGL--RRKEGEVTKVLSVAMSSREI--DNDCWDIFFATMIGD 515

Query: 722  SDSWRHVFDGILSE 763
             D+   V + ILSE
Sbjct: 516  LDTGATVLEKILSE 529



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
 Frame = +2

Query: 146 VPSSALCCKVIDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARK 325
           VP+   C  +I  LC    +E A  V  ++      P+    +T++     +G +  A++
Sbjct: 188 VPNVFTCNILIKALCNKNDMEGARRVLDEMPAMGMVPNVVTYTTIMGGHVSRGDMVGAKR 247

Query: 326 LFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFC 502
           +F E  ++G +P   TY  L+ G  + G L +A ++ D+M E G +PN  +Y ++I  +C
Sbjct: 248 VFGEILDRGWLPDATTYTILMDGYVKIGRLADAIKVMDEMEENGVLPNDVTYGVMIEAYC 307

Query: 503 KAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
           K  K+ E + + E+MLE + +P+      +++ L   G  E+A +L
Sbjct: 308 KGNKSGEALNLLEDMLEGKYIPSSALCCKVIDVLCQQGKVEDACEL 353



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 38/131 (29%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 254 PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 430
           P+    + LI  +  K  +  AR++ DE    G +P+V+TY T++ G   RG++  A R+
Sbjct: 189 PNVFTCNILIKALCNKNDMEGARRVLDEMPAMGMVPNVVTYTTIMGGHVSRGDMVGAKRV 248

Query: 431 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 610
           + +++++G +P+  +Y +L++G+ K G+ ++ +++ +EM E   +PN  TY +++E+   
Sbjct: 249 FGEILDRGWLPDATTYTILMDGYVKIGRLADAIKVMDEMEENGVLPNDVTYGVMIEAYCK 308

Query: 611 SGMEEEASKLL 643
                EA  LL
Sbjct: 309 GNKSGEALNLL 319



 Score = 67.8 bits (164), Expect = 8e-09
 Identities = 36/113 (31%), Positives = 61/113 (53%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G +P+V T N LI  +C + +++ A R+ D+M   G VPNV +Y  ++ G    G     
Sbjct: 186 GVVPNVFTCNILIKALCNKNDMEGARRVLDEMPAMGMVPNVVTYTTIMGGHVSRGDMVGA 245

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDND 685
            R+F E+L++  +P+  TY+IL++     G   +A K++     +G   L ND
Sbjct: 246 KRVFGEILDRGWLPDATTYTILMDGYVKIGRLADAIKVMDEMEENG--VLPND 296


>ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Citrus sinensis]
          Length = 571

 Score =  369 bits (947), Expect = 1e-99
 Identities = 170/252 (67%), Positives = 210/252 (83%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEME+NGV+PN+VTYGVMIEA+CK KKSGEA NLLDDML++KYVPSSALCCKVID
Sbjct: 318  AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 377

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            +LCE+GKVE+AC++WK+LLRKNC PDNAISST+I+W+ K+GKIWEA+KLFDEFE+GSIPS
Sbjct: 378  LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 437

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCE  EL EAGRLWDDMVEKG  PNVF+YNMLI GFCK G A EG+RI E
Sbjct: 438  LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 497

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C PNK ++S+L+E LY SG E E  K++ +AT+SG +  ++D W     ++  +
Sbjct: 498  EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV--ESDSWNFLLTRIVSD 555

Query: 722  SDSWRHVFDGIL 757
             DS     D +L
Sbjct: 556  LDSGAGALDELL 567



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEK-KYVPSSALCCKVI 178
           A+K    +E+  V  +  +   ++ A  + K+      +  +   K K VP+   C  +I
Sbjct: 177 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 236

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLF-DEFEKGSI 355
             LC+   VE A  V  ++      P+    +T++     +G I  A+++F D  ++G +
Sbjct: 237 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 296

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P   TY  L+ G  + G L +A ++ D+M + G  PN  +Y ++I  FCK  K+ E   +
Sbjct: 297 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 356

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
            ++ML+++ VP+      +++ L   G  E+A +L
Sbjct: 357 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 391



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +2

Query: 254 PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 430
           P+    + LI  + KK  +  A ++ DE    G +P+++T+ T++ G   RG+++ A R+
Sbjct: 227 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 286

Query: 431 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 610
           + D++++G VP+  +Y +L++G+ K G+ ++ V++ +EM +    PN+ TY +++E+   
Sbjct: 287 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 346

Query: 611 SGMEEEASKLL 643
                EA  LL
Sbjct: 347 GKKSGEARNLL 357



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 59/104 (56%)
 Frame = +2

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P+V T N LI  +C++ +++ A R+ D+M   G VPN+ ++  ++ G+   G      R
Sbjct: 226 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 285

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
           +F ++L++  VP+  TY++L++     G   +A K++     +G
Sbjct: 286 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 329


>ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citrus clementina]
           gi|557547043|gb|ESR58021.1| hypothetical protein
           CICLE_v10024306mg [Citrus clementina]
          Length = 537

 Score =  367 bits (942), Expect = 5e-99
 Identities = 168/243 (69%), Positives = 207/243 (85%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
           A+K+MDEME+NGV+PN+VTYGVMIEA+CK KKSGEA NLLDDML++KYVPSSALCCKVID
Sbjct: 274 AVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVID 333

Query: 182 VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
           +LCE+GKVE+AC++WK+LLRKNC PDNAISST+I+W+ K+GKIWEA+KLFDEFE+GSIPS
Sbjct: 334 LLCEEGKVEDACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPS 393

Query: 362 VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
           +LTYNTLI+GMCE  EL EAGRLWDDMVEKG  PNVF+YNMLI GFCK G A EG+RI E
Sbjct: 394 LLTYNTLIAGMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILE 453

Query: 542 EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
           EML+K C PNK ++S+L+E LY SG E E  K++ +AT+SG +  ++D W     ++  +
Sbjct: 454 EMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV--ESDSWNFLLTRIVSD 511

Query: 722 SDS 730
            DS
Sbjct: 512 LDS 514



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 55/215 (25%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEK-KYVPSSALCCKVI 178
           A+K    +E+  V  +  +   ++ A  + K+      +  +   K K VP+   C  +I
Sbjct: 133 AVKTFLRIEKFNVQRSVRSLNTLLNALVQNKRYDLVHLMFKNSRHKFKVVPNVFTCNILI 192

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLF-DEFEKGSI 355
             LC+   VE A  V  ++      P+    +T++     +G I  A+++F D  ++G +
Sbjct: 193 KALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWV 252

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P   TY  L+ G  + G L +A ++ D+M + G  PN  +Y ++I  FCK  K+ E   +
Sbjct: 253 PDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNL 312

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
            ++ML+++ VP+      +++ L   G  E+A +L
Sbjct: 313 LDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACEL 347



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +2

Query: 254 PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 430
           P+    + LI  + KK  +  A ++ DE    G +P+++T+ T++ G   RG+++ A R+
Sbjct: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242

Query: 431 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 610
           + D++++G VP+  +Y +L++G+ K G+ ++ V++ +EM +    PN+ TY +++E+   
Sbjct: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302

Query: 611 SGMEEEASKLL 643
                EA  LL
Sbjct: 303 GKKSGEARNLL 313



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 59/104 (56%)
 Frame = +2

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P+V T N LI  +C++ +++ A R+ D+M   G VPN+ ++  ++ G+   G      R
Sbjct: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
           +F ++L++  VP+  TY++L++     G   +A K++     +G
Sbjct: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  363 bits (933), Expect = 5e-98
 Identities = 167/254 (65%), Positives = 205/254 (80%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            AIK+MD+M ENGV+PN+VTYGVM+EAYCKEKK+GEA NLLDDMLE++YVPSSALCCKVID
Sbjct: 290  AIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVID 349

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLCE GK+EEAC++WK++L+KNC PDNAI STLI+W+ K+GK+WEARKLF EFE+G+IPS
Sbjct: 350  VLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPS 409

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCE+GEL EAG+LWDDM+EKG  PN F+YNMLI GF K G A EG+RI E
Sbjct: 410  LLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILE 469

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+  C+PNK TY+IL+E L   GME E  K++ +A +SGG+  D+D W +F  K  G 
Sbjct: 470  EMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGV--DSDSWDLFLNKAVGN 527

Query: 722  SDSWRHVFDGILSE 763
             D      D    E
Sbjct: 528  LDRGSKALDSFFKE 541



 Score =  101 bits (252), Expect = 5e-19
 Identities = 60/216 (27%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKY--VPSSALCCKV 175
           A++    +++  V  +  +   ++ A+ + K+  + ++ +      KY  +P+   C  +
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRY-DLVHAMFKNCRSKYGVLPNVFTCNIL 207

Query: 176 IDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGS 352
           I  LC+   VE A  V  ++      P+    +T++   S +G +  A K+F E F++G 
Sbjct: 208 IKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGW 267

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P   TY  L++G CE+G L +A +L DDM E G  PN  +Y +++  +CK  KA E   
Sbjct: 268 LPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARN 327

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
           + ++MLE++ VP+      +++ L  +G  EEA +L
Sbjct: 328 LLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACEL 363



 Score = 85.1 bits (209), Expect = 5e-14
 Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 242 KNCT------PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 400
           KNC       P+    + LI  + KK  +  A K+ DE    G IP+V+TY T++ G   
Sbjct: 189 KNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSS 248

Query: 401 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 580
           RG++  A +++ ++ ++G +P+  +Y +L+NG+C+ G+ ++ +++ ++M E    PN+ T
Sbjct: 249 RGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVT 308

Query: 581 YSILVESLYGSGMEEEASKLL 643
           Y ++VE+        EA  LL
Sbjct: 309 YGVMVEAYCKEKKAGEARNLL 329


>ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, partial [Populus
           trichocarpa] gi|550326138|gb|EEE95967.2| hypothetical
           protein POPTR_0012s01390g, partial [Populus trichocarpa]
          Length = 515

 Score =  357 bits (916), Expect = 5e-96
 Identities = 165/242 (68%), Positives = 199/242 (82%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
           AIK+MD ME NGV+PN+VTYGVMI+AYCKEKKSGEA NL+DDML+KK++PSS LCCKVID
Sbjct: 276 AIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVID 335

Query: 182 VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
           VLCEDGKVE AC +WK++L KNC PDNAI STLI+W+ K+GK+WEARKLFDEFE+G+IPS
Sbjct: 336 VLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPS 395

Query: 362 VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
           ++TYNTLI+GMCERGEL EAGRLWDDMVEK C PN F+YNMLI GF KAG   EGVRI E
Sbjct: 396 LMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILE 455

Query: 542 EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
           EML+  C+PNK TY++L+E L  SGME +  K++ +A +S  +  D D W +F  K+ G 
Sbjct: 456 EMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMASREV--DADSWDLFLHKIVGN 513

Query: 722 SD 727
            D
Sbjct: 514 LD 515



 Score = 84.3 bits (207), Expect = 8e-14
 Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
 Frame = +2

Query: 173 VIDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKG 349
           +I  LC+   VE A  V+ ++      P+    +T++     +G +  A K+F E  +KG
Sbjct: 193 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 252

Query: 350 SIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGV 529
            +P   TY  L+ G C++G L +A ++ D+M   G  PN  +Y ++I+ +CK  K+ E  
Sbjct: 253 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEAR 312

Query: 530 RIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
            + ++ML+K+ +P+      +++ L   G  E A  L
Sbjct: 313 NLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHL 349



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
 Frame = +2

Query: 149 PSSALCCKVIDVLCEDGKVEEACDVWKKLLRKNCTPDNAIS-STLIYWVSKKGKIWEARK 325
           PS  L   +++V  ++ +        K    K     N  S + LI  + KK  +  A K
Sbjct: 149 PSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALK 208

Query: 326 LFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFC 502
           +FDE    G IP+++TY T++ G   RG+L  A +++ ++ +KG +P+  +Y +L+ G+C
Sbjct: 209 VFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYC 268

Query: 503 KAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
           K G+ S+ +++ + M      PN+ TY +++++        EA  L+
Sbjct: 269 KQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLI 315


>ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Solanum lycopersicum]
          Length = 561

 Score =  351 bits (900), Expect = 4e-94
 Identities = 166/257 (64%), Positives = 202/257 (78%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A KIMDEM++NG+ PN+VTYG+MIEA+CKEKKSGEA+NLL+DML+K+Y+PS  LC KVID
Sbjct: 308  AAKIMDEMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNLLNDMLDKRYIPSPTLCSKVID 367

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLCE+GKVEEACD+WKKLL KNCTPDN ISSTL++W+ KKG+I EARKLFDEFEK S PS
Sbjct: 368  VLCEEGKVEEACDLWKKLLVKNCTPDNTISSTLVHWLCKKGQIREARKLFDEFEKSSSPS 427

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            VLTYN LI+GMCE+GEL EAGRLWDDMV+KGC+PN F+YNMLI GFCK G A EG+R+ E
Sbjct: 428  VLTYNMLIAGMCEKGELHEAGRLWDDMVDKGCIPNAFTYNMLIKGFCKVGNAKEGIRVLE 487

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C PNK TYSIL++ L  S +  E  ++L LA S     +D + W +   K   +
Sbjct: 488  EMLDKGCHPNKSTYSILIKGLLDSELNAEILRVLALAASGD---VDPETWGVLVAKFVTD 544

Query: 722  SDSWRHVFDGILSETDV 772
              +   V D  LSE +V
Sbjct: 545  IQNVCAVLDKTLSENEV 561



 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVI- 178
           A+K    +E+ GV  +  ++  ++ A  + K+      L  +  +K ++  S   C ++ 
Sbjct: 167 ALKTFLRIEKFGVQRSVRSFNALLNALVQNKEYDFVYALFKNCQKKLHITPSVFTCNILL 226

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSI 355
           + LC+   +  A  V  ++      P+    +T++      G +  A+++FDE  ++G +
Sbjct: 227 NALCKKDDINSATKVLDEMPVMGIVPNVVSYTTILGCYVSLGDLLGAKRMFDEIVDRGWL 286

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P   TY  L+ G  ++G+  +A ++ D+M + G  PN  +Y ++I  FCK  K+ E V +
Sbjct: 287 PDATTYTILMHGYVKQGKFIDAAKIMDEMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNL 346

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
             +ML+K  +P+    S +++ L   G  EEA  L
Sbjct: 347 LNDMLDKRYIPSPTLCSKVIDVLCEEGKVEEACDL 381



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 57/214 (26%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
 Frame = +2

Query: 11  IMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCK-VIDVL 187
           ++ E+  +G+   +V +  +I  Y    K   AL      +EK  V  S      +++ L
Sbjct: 135 LLTELRNSGIKCGEVLFVNVIRNYGIAGKPKLALKTFL-RIEKFGVQRSVRSFNALLNAL 193

Query: 188 CEDGKVEEACDVWKKLLRK-NCTPDNAISSTLIYWVSKKGKIWEARKLFDEFE-KGSIPS 361
            ++ + +    ++K   +K + TP     + L+  + KK  I  A K+ DE    G +P+
Sbjct: 194 VQNKEYDFVYALFKNCQKKLHITPSVFTCNILLNALCKKDDINSATKVLDEMPVMGIVPN 253

Query: 362 VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
           V++Y T++      G+L  A R++D++V++G +P+  +Y +L++G+ K GK  +  +I +
Sbjct: 254 VVSYTTILGCYVSLGDLLGAKRMFDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKIMD 313

Query: 542 EMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
           EM +    PN+ TY I++E+        EA  LL
Sbjct: 314 EMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNLL 347



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 30/103 (29%), Positives = 58/103 (56%)
 Frame = +2

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           PSV T N L++ +C++ ++  A ++ D+M   G VPNV SY  ++  +   G      R+
Sbjct: 217 PSVFTCNILLNALCKKDDINSATKVLDEMPVMGIVPNVVSYTTILGCYVSLGDLLGAKRM 276

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
           F+E++++  +P+  TY+IL+      G   +A+K++     +G
Sbjct: 277 FDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKIMDEMDDNG 319


>ref|XP_007220019.1| hypothetical protein PRUPE_ppa003879mg [Prunus persica]
            gi|462416481|gb|EMJ21218.1| hypothetical protein
            PRUPE_ppa003879mg [Prunus persica]
          Length = 542

 Score =  348 bits (894), Expect = 2e-93
 Identities = 163/254 (64%), Positives = 201/254 (79%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEMEEN V PN+VTYGVMIEAYCK KKSGEA+NLL+DM+EK+YVPSSALCCKVID
Sbjct: 288  AVKVMDEMEENKVGPNEVTYGVMIEAYCKAKKSGEAVNLLNDMIEKRYVPSSALCCKVID 347

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLC +GK E+ C++WK+LL+ NCTPDNAISSTLIYW+ K+GK+WEA+KLFD+ +   IP 
Sbjct: 348  VLCHEGKAEDGCELWKRLLKNNCTPDNAISSTLIYWLCKEGKVWEAKKLFDQLKTDLIPG 407

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            V+TYN LI+G+CE GEL EAGRLWDDMVEKGC PN F+YNMLI GFCK GKA EG+R+ E
Sbjct: 408  VMTYNMLIAGLCEVGELCEAGRLWDDMVEKGCAPNAFTYNMLIKGFCKIGKAEEGIRMLE 467

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C+P K TY +L+E L     E+E +K++ LA S+G I  ++  W I   K  G+
Sbjct: 468  EMLDKGCLPTKSTYGMLIEGLCDLRKEDEVTKVISLAMSNGDI--ESASWDILLTKFVGD 525

Query: 722  SDSWRHVFDGILSE 763
             D+   V D IL E
Sbjct: 526  LDNGGAVMDKILVE 539



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 1/203 (0%)
 Frame = +2

Query: 35  GVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVIDVLCEDGKVEEA 214
           GV PN  T  ++I+A C++     AL +LD+M    +VP       V+      G +  A
Sbjct: 194 GVRPNVFTCNILIKALCQKDDVETALKVLDEMPAMGFVPDVVTYTTVLGGYVSRGDMVGA 253

Query: 215 CDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISG 391
             V+ ++L +   PD    + L+    K+GK+ +A K+ DE E+  + P+ +TY  +I  
Sbjct: 254 KRVFGEVLDRGWHPDATTYTILMDGFVKQGKLVDAVKVMDEMEENKVGPNEVTYGVMIEA 313

Query: 392 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 571
            C+  +  EA  L +DM+EK  VP+      +I+  C  GKA +G  +++ +L+  C P+
Sbjct: 314 YCKAKKSGEAVNLLNDMIEKRYVPSSALCCKVIDVLCHEGKAEDGCELWKRLLKNNCTPD 373

Query: 572 KFTYSILVESLYGSGMEEEASKL 640
               S L+  L   G   EA KL
Sbjct: 374 NAISSTLIYWLCKEGKVWEAKKL 396



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 242 KNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 400
           KNC       P+    + LI  + +K  +  A K+ DE    G +P V+TY T++ G   
Sbjct: 187 KNCGQRFGVRPNVFTCNILIKALCQKDDVETALKVLDEMPAMGFVPDVVTYTTVLGGYVS 246

Query: 401 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 580
           RG++  A R++ +++++G  P+  +Y +L++GF K GK  + V++ +EM E +  PN+ T
Sbjct: 247 RGDMVGAKRVFGEVLDRGWHPDATTYTILMDGFVKQGKLVDAVKVMDEMEENKVGPNEVT 306

Query: 581 YSILVESLYGSGMEEEASKLL 643
           Y +++E+   +    EA  LL
Sbjct: 307 YGVMIEAYCKAKKSGEAVNLL 327


>ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Solanum tuberosum]
          Length = 564

 Score =  348 bits (893), Expect = 2e-93
 Identities = 166/257 (64%), Positives = 200/257 (77%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A KIMDEME+NG+ PN+VTYG+MIEA+CKE KSGEA+NLL+DML+K+Y+PS  LC KVID
Sbjct: 311  AAKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINLLNDMLDKRYIPSPTLCSKVID 370

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLCE+GKVEEACD+WKKLL KNCTPDN I STLI+W+ KKG+I EARKLFDEFEK S PS
Sbjct: 371  VLCEEGKVEEACDLWKKLLVKNCTPDNTILSTLIHWLCKKGQIREARKLFDEFEKSSSPS 430

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            VLTYN LI+GMCE+G+L EAGRLWDDMV+KGCVPN F+YNMLI GFCK G A EG+R+ E
Sbjct: 431  VLTYNMLIAGMCEKGKLHEAGRLWDDMVDKGCVPNAFTYNMLIKGFCKVGNAKEGIRVLE 490

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C PNK TYSIL++ L  S +  E  ++L LA S     +D++ W +   K    
Sbjct: 491  EMLDKGCHPNKSTYSILIKGLLDSELNAEVLRVLALAASGD---VDSETWGVLVAKFVTN 547

Query: 722  SDSWRHVFDGILSETDV 772
              +   V D  LSE +V
Sbjct: 548  VQNVCSVLDKTLSENEV 564



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 53/215 (24%), Positives = 107/215 (49%), Gaps = 2/215 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVI- 178
           A+K    +E+ GV  +  ++  ++ A  + K+      L  +  +K ++  S   C ++ 
Sbjct: 170 ALKTFLRIEKFGVQRSVRSFNALLNALVQNKEYDFVYALFKNSQKKLHITPSVFTCNILL 229

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSI 355
           + LC+   +  A  V  ++      P+    +T++      G +  A+++FDE  ++G +
Sbjct: 230 NALCKKDDINSAIKVLDEMPVMGIIPNVVSYTTILGCYVSLGDLVGAKRMFDEIVDRGWL 289

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P   TY  L+ G  ++G+  +A ++ D+M + G  PN  +Y ++I  FCK  K+ E + +
Sbjct: 290 PDATTYTILMHGYAKQGKFIDAAKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINL 349

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
             +ML+K  +P+    S +++ L   G  EEA  L
Sbjct: 350 LNDMLDKRYIPSPTLCSKVIDVLCEEGKVEEACDL 384



 Score = 77.8 bits (190), Expect = 8e-12
 Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
 Frame = +2

Query: 173 VIDVLCEDGKVEEACDVWKKLLRK-NCTPDNAISSTLIYWVSKKGKIWEARKLFDEFE-K 346
           +++ L ++ + +    ++K   +K + TP     + L+  + KK  I  A K+ DE    
Sbjct: 192 LLNALVQNKEYDFVYALFKNSQKKLHITPSVFTCNILLNALCKKDDINSAIKVLDEMPVM 251

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G IP+V++Y T++      G+L  A R++D++V++G +P+  +Y +L++G+ K GK  + 
Sbjct: 252 GIIPNVVSYTTILGCYVSLGDLVGAKRMFDEIVDRGWLPDATTYTILMHGYAKQGKFIDA 311

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
            +I +EM +    PN+ TY I++E+        EA  LL
Sbjct: 312 AKIMDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINLL 350



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 29/103 (28%), Positives = 58/103 (56%)
 Frame = +2

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           PSV T N L++ +C++ ++  A ++ D+M   G +PNV SY  ++  +   G      R+
Sbjct: 220 PSVFTCNILLNALCKKDDINSAIKVLDEMPVMGIIPNVVSYTTILGCYVSLGDLVGAKRM 279

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
           F+E++++  +P+  TY+IL+      G   +A+K++     +G
Sbjct: 280 FDEIVDRGWLPDATTYTILMHGYAKQGKFIDAAKIMDEMEDNG 322


>ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like, partial [Fragaria vesca subsp. vesca]
          Length = 506

 Score =  344 bits (883), Expect = 3e-92
 Identities = 161/254 (63%), Positives = 200/254 (78%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEME+NGV  N+VTYGVMIE YCK +K GEA+NLL+DM++K+YVP SALCCKV+D
Sbjct: 252  AVKVMDEMEDNGVGANEVTYGVMIEGYCKGRKGGEAVNLLNDMVDKRYVPCSALCCKVVD 311

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLC  GKVE AC++W++LL+KNC PDNA+  TLIYW+ KKGK+WEARKLFD+FE    P 
Sbjct: 312  VLCCQGKVENACELWRRLLKKNCMPDNAVLGTLIYWLCKKGKVWEARKLFDQFETSEPPD 371

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            V+TYN LISGMCE GEL EAGRLWDDMVEKG  PN F+YN+LI GFCK  KA+EG+RI +
Sbjct: 372  VMTYNVLISGMCEAGELCEAGRLWDDMVEKGYTPNSFTYNVLIKGFCKIKKATEGIRILD 431

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EMLEK C+PNK TY++L+E L  SG E E ++L+ +A SSG +  D+D W +F  KV  +
Sbjct: 432  EMLEKGCLPNKSTYAMLMEGLCDSGEEAEINRLISMAMSSGHV--DSDSWDLFLTKVVCD 489

Query: 722  SDSWRHVFDGILSE 763
             DS   V + IL E
Sbjct: 490  LDSGESVLNRILQE 503



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
 Frame = +2

Query: 26  EENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVIDVLCEDGKV 205
           E  GV PN  +  ++I+A CK      A  +LD+M    +VP+      ++        +
Sbjct: 155 ERFGVSPNVSSCNILIKALCKRNDLETARQVLDEMPAMGFVPNVVSFTTILGGYVSRRDM 214

Query: 206 EEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTL 382
             A  V+ ++L +   PD    + L+    K+GK+ EA K+ DE E   +  + +TY  +
Sbjct: 215 VGAKRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMEDNGVGANEVTYGVM 274

Query: 383 ISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKEC 562
           I G C+  +  EA  L +DMV+K  VP       +++  C  GK      ++  +L+K C
Sbjct: 275 IEGYCKGRKGGEAVNLLNDMVDKRYVPCSALCCKVVDVLCCQGKVENACELWRRLLKKNC 334

Query: 563 VPNKFTYSILVESLYGSGMEEEASKL 640
           +P+      L+  L   G   EA KL
Sbjct: 335 MPDNAVLGTLIYWLCKKGKVWEARKL 360



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
 Frame = +2

Query: 212 ACDVWKKLLRKN-----CTPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTY 373
           +CD+   + R +      +P+ +  + LI  + K+  +  AR++ DE    G +P+V+++
Sbjct: 142 SCDLVHSVFRSSKERFGVSPNVSSCNILIKALCKRNDLETARQVLDEMPAMGFVPNVVSF 201

Query: 374 NTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLE 553
            T++ G   R ++  A R++ +++++G  P+  +Y +L++G+ K GK  E V++ +EM +
Sbjct: 202 TTILGGYVSRRDMVGAKRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMED 261

Query: 554 KECVPNKFTYSILVESLYGSGMEEEASKLL 643
                N+ TY +++E         EA  LL
Sbjct: 262 NGVGANEVTYGVMIEGYCKGRKGGEAVNLL 291



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 32/106 (30%), Positives = 57/106 (53%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G  P+V + N LI  +C+R +L+ A ++ D+M   G VPNV S+  ++ G+         
Sbjct: 158 GVSPNVSSCNILIKALCKRNDLETARQVLDEMPAMGFVPNVVSFTTILGGYVSRRDMVGA 217

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
            R+F E+L++   P+  TY++L++     G   EA K++     +G
Sbjct: 218 KRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMEDNG 263


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Cucumis sativus]
            gi|449492939|ref|XP_004159147.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  340 bits (873), Expect = 5e-91
 Identities = 161/255 (63%), Positives = 201/255 (78%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MDEMEENGV+PND+TYGV+I  YCKE+KSGEALNLL+DMLEKKY+P+SALCCKVID
Sbjct: 281  AVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVID 340

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            VLC +G+V+EAC +W+KLL+KNCTPDNAI+STLI+W+ K+G IWEARKLF+EFE+G+I S
Sbjct: 341  VLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISS 400

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCE GEL EA RLWDDM+EKGCVPN F+YNMLI GF K GKA E +++ E
Sbjct: 401  LLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVE 460

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EML+K C+ N+ TY ILVE L   G  EE   +L +  SSG +  D   W +F       
Sbjct: 461  EMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV--DFKAWNLFVPHFVSN 518

Query: 722  SDSWRHVFDGILSET 766
             +   ++ + IL ET
Sbjct: 519  VNEQANILEKILIET 533



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKY--VPSSALCCKV 175
           A+K    ++  GV  +  +   ++ A  +  +   +++LL    + K+  VP+   C  +
Sbjct: 140 ALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFS-SVHLLFKYSKSKFGVVPNVFTCNIL 198

Query: 176 IDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGS 352
           I  LC+   VE A  V+ ++      P+    +T++     +G +  A+++F E F+ G 
Sbjct: 199 IKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGW 258

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P   TY  L+ G  ++G   +A ++ D+M E G  PN  +Y ++I G+CK  K+ E + 
Sbjct: 259 LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALN 318

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
           +  +MLEK+ +PN      +++ L G G  +EA K+
Sbjct: 319 LLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKM 354



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
 Frame = +2

Query: 254 PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 430
           P+    + LI  + KK  +  ARK+FDE    G +P+V+TY T++ G   RG++  A R+
Sbjct: 190 PNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRV 249

Query: 431 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 610
           + ++ + G +P+  +Y +L++G+ K G+ ++ V++ +EM E    PN  TY +++     
Sbjct: 250 FGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCK 309

Query: 611 SGMEEEASKLL 643
                EA  LL
Sbjct: 310 ERKSGEALNLL 320



 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 31/106 (29%), Positives = 59/106 (55%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G +P+V T N LI  +C++ +++ A +++D+M   G VPNV +Y  ++ G+   G     
Sbjct: 187 GVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGA 246

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
            R+F E+ +   +P+  TY+IL++     G   +A K++     +G
Sbjct: 247 KRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENG 292


>ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
            gi|548837495|gb|ERM98263.1| hypothetical protein
            AMTR_s00221p00020810 [Amborella trichopoda]
          Length = 549

 Score =  336 bits (862), Expect = 9e-90
 Identities = 157/245 (64%), Positives = 200/245 (81%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A+K+MD+MEENGV PNDVTYGV+IE+YCKE +SGEAL+LL++MLEKK++P S LCCK++D
Sbjct: 297  AVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLLNEMLEKKFIPCSTLCCKIVD 356

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            +LC++ KV+EAC +WKKLL++NC PDNAI STLIYW+ K  KI EARKLFDEFEKG +PS
Sbjct: 357  LLCQESKVDEACVLWKKLLKRNCIPDNAIYSTLIYWLCKGEKIKEARKLFDEFEKGFLPS 416

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLIS MCE+GELQEAGRLWD+M+EKGCVPNVF+YN+LI GF   G+  EG+R+ E
Sbjct: 417  ILTYNTLISAMCEKGELQEAGRLWDNMIEKGCVPNVFTYNILIKGFSIIGRGREGLRVLE 476

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EMLEK C  NK TY+IL++  +GS   ++  KLL +AT+S G  LD D W +F  KV  +
Sbjct: 477  EMLEKRCEANKSTYAILMDGFHGS--TDDIMKLL-VATTSRGFLLDLDSWGLFVDKVICD 533

Query: 722  SDSWR 736
             + W+
Sbjct: 534  REGWK 538



 Score =  103 bits (258), Expect = 1e-19
 Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 1/214 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
           A++   +M E G++ +  ++  ++ A  + K+      L  +  +    P+   C  +I 
Sbjct: 157 ALRSFFKMNEFGINKSIRSFNTLLNAMIQTKRFDLVHILYKNCQKFGIFPNIFTCNILIK 216

Query: 182 VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIP 358
            LC+   +E A  V +++  +   P+    +T++     +G +  A+++FDE   KG +P
Sbjct: 217 ALCQMNNLESAFRVLEEMPSQGFVPNPVTYTTILSGFCARGDLIRAKRIFDEIITKGWVP 276

Query: 359 SVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIF 538
             +TY  +I G C++G L +A +L DDM E G +PN  +Y ++I  +CK G++ E + + 
Sbjct: 277 DPITYTVMIDGFCKKGRLMDAVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLL 336

Query: 539 EEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
            EMLEK+ +P       +V+ L      +EA  L
Sbjct: 337 NEMLEKKFIPCSTLCCKIVDLLCQESKVDEACVL 370



 Score = 97.4 bits (241), Expect = 9e-18
 Identities = 56/211 (26%), Positives = 111/211 (52%), Gaps = 1/211 (0%)
 Frame = +2

Query: 14  MDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVIDVLCE 193
           + E++++ +  ++ T+ V+I  Y    K   AL     M E     S      +++ + +
Sbjct: 126 LKELKDSRIQCSEKTFIVVIRNYGFANKPKMALRSFFKMNEFGINKSIRSFNTLLNAMIQ 185

Query: 194 DGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLT 370
             + +    ++K   +    P+    + LI  + +   +  A ++ +E   +G +P+ +T
Sbjct: 186 TKRFDLVHILYKNCQKFGIFPNIFTCNILIKALCQMNNLESAFRVLEEMPSQGFVPNPVT 245

Query: 371 YNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEML 550
           Y T++SG C RG+L  A R++D+++ KG VP+  +Y ++I+GFCK G+  + V++ ++M 
Sbjct: 246 YTTILSGFCARGDLIRAKRIFDEIITKGWVPDPITYTVMIDGFCKKGRLMDAVKLMDDME 305

Query: 551 EKECVPNKFTYSILVESLYGSGMEEEASKLL 643
           E   +PN  TY +++ES    G   EA  LL
Sbjct: 306 ENGVLPNDVTYGVVIESYCKEGRSGEALSLL 336


>ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutrema salsugineum]
            gi|557101269|gb|ESQ41632.1| hypothetical protein
            EUTSA_v10013226mg [Eutrema salsugineum]
          Length = 530

 Score =  327 bits (839), Expect = 4e-87
 Identities = 153/255 (60%), Positives = 195/255 (76%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A  +MD+ME+N ++PN+VTYGVMI A CKEKK+GEA N+LD+M+++ +VP S+LCCKVID
Sbjct: 275  AAMVMDDMEKNEIEPNEVTYGVMIGALCKEKKAGEARNMLDEMIDRSFVPDSSLCCKVID 334

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
             LCED KV+EAC +W+K+L+ NC PDNA+ STLI+W+ K G++ EARKLFDEFEKGSIPS
Sbjct: 335  ALCEDHKVDEACSLWRKMLKNNCMPDNALLSTLIHWLCKDGRVSEARKLFDEFEKGSIPS 394

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLISGMCE+GEL EAGRLWDDMVE+ C PN F+YN+LI G  K G   EGVR+ E
Sbjct: 395  LLTYNTLISGMCEKGELTEAGRLWDDMVERRCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 454

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EMLEK C PNK T+ IL E L   G EE+A K++ +A  SG +  D + W +F +K  GE
Sbjct: 455  EMLEKGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMSGKV--DKESWELFLKKFAGE 512

Query: 722  SDSWRHVFDGILSET 766
             D    V + +L E+
Sbjct: 513  LDKGVVVLEELLRES 527



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 242 KNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 400
           KNC      TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   
Sbjct: 174 KNCKESFGITPNIFTCNLLVKALCKKNDIESAFKVLDEIPAMGLVPNLVTYTTILGGYVA 233

Query: 401 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 580
           RG+++ A R+  +M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ T
Sbjct: 234 RGDMEAAKRVLREMMDRGWDPDATTYTVLMDGYCKLGRFSEAAMVMDDMEKNEIEPNEVT 293

Query: 581 YSILVESLYGSGMEEEASKLL 643
           Y +++ +L       EA  +L
Sbjct: 294 YGVMIGALCKEKKAGEARNML 314



 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
 Frame = +2

Query: 149 PSSALCCKVIDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKL 328
           P+   C  ++  LC+   +E A  V  ++      P+    +T++     +G +  A+++
Sbjct: 184 PNIFTCNLLVKALCKKNDIESAFKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAAKRV 243

Query: 329 FDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCK 505
             E  ++G  P   TY  L+ G C+ G   EA  + DDM +    PN  +Y ++I   CK
Sbjct: 244 LREMMDRGWDPDATTYTVLMDGYCKLGRFSEAAMVMDDMEKNEIEPNEVTYGVMIGALCK 303

Query: 506 AGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
             KA E   + +EM+++  VP+      ++++L      +EA  L
Sbjct: 304 EKKAGEARNMLDEMIDRSFVPDSSLCCKVIDALCEDHKVDEACSL 348


>ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Capsella rubella]
            gi|482556174|gb|EOA20366.1| hypothetical protein
            CARUB_v10000680mg [Capsella rubella]
          Length = 533

 Score =  322 bits (825), Expect = 2e-85
 Identities = 152/257 (59%), Positives = 191/257 (74%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A  +MDEME+N V+PN+VTYGVMI   CKEKKSGEA N+ D+ML+K ++P S+LCCKVID
Sbjct: 278  AATVMDEMEKNEVEPNEVTYGVMIRGLCKEKKSGEARNMFDEMLDKSFMPDSSLCCKVID 337

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
             LCED KV+EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEFEKGSIPS
Sbjct: 338  ALCEDHKVDEACALWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFEKGSIPS 397

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LT+NTLISGMCE+GEL EAGRLWDDMVE+ C PN F+YN+LI G  K G   EGVR+ E
Sbjct: 398  LLTFNTLISGMCEKGELTEAGRLWDDMVERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 457

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EMLE  C PNK T+ IL E +   G EE+A K++ +A   G +  D + W +F +K  GE
Sbjct: 458  EMLENGCFPNKTTFLILFEGIQELGKEEDAIKVVSMAVMRGKV--DKESWELFLKKFAGE 515

Query: 722  SDSWRHVFDGILSETDV 772
             D    V   +L E  V
Sbjct: 516  LDKGVLVLKELLHEVSV 532



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
 Frame = +2

Query: 26  EENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVIDVLCEDGKV 205
           E  G+ PN  T  ++++A CK+     A  +LD++     VP+      ++      G +
Sbjct: 181 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDM 240

Query: 206 EEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTL 382
           E A  V  ++L +   PD    + L+    K G+  EA  + DE EK  + P+ +TY  +
Sbjct: 241 EAAKRVLGEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDEMEKNEVEPNEVTYGVM 300

Query: 383 ISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKEC 562
           I G+C+  +  EA  ++D+M++K  +P+      +I+  C+  K  E   ++ +ML+  C
Sbjct: 301 IRGLCKEKKSGEARNMFDEMLDKSFMPDSSLCCKVIDALCEDHKVDEACALWRKMLKNNC 360

Query: 563 VPNKFTYSILVESLYGSGMEEEASKL 640
           +P+    S L+  L   G   EA KL
Sbjct: 361 MPDNALLSTLIHWLCKEGRVSEARKL 386



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 26/99 (26%), Positives = 55/99 (55%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAA 243

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
            R+  EML++   P+  TY++L++     G   EA+ ++
Sbjct: 244 KRVLGEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 282


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  320 bits (819), Expect = 9e-85
 Identities = 147/242 (60%), Positives = 187/242 (77%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
           A  +MD+ME+N ++PN+VTYGVMI A CKEKKSGEA N+ D+MLE+ ++P S+LCCKVID
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339

Query: 182 VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
            LCED KV+EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEFEKGSIPS
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPS 399

Query: 362 VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
           +LTYNTLI+GMCE+GEL EAGRLWDDM E+ C PN F+YN+LI G  K G   EGVR+ E
Sbjct: 400 LLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459

Query: 542 EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
           EMLE  C PNK T+ IL E L   G EE+A K++ +A  +G +  D + W +F +K  GE
Sbjct: 460 EMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV--DKESWELFLKKFAGE 517

Query: 722 SD 727
            D
Sbjct: 518 LD 519



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 40/131 (30%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 251 TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGR 427
           TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   RG+++ A R
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247

Query: 428 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 607
           + ++M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ TY +++ +L 
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307

Query: 608 GSGMEEEASKL 640
                 EA  +
Sbjct: 308 KEKKSGEARNM 318



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
 Frame = +2

Query: 149 PSSALCCKVIDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKL 328
           P+   C  ++  LC+   +E A  V  ++      P+    +T++     +G +  A+++
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRV 248

Query: 329 FDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCK 505
            +E  ++G  P   TY  L+ G C+ G   EA  + DDM +    PN  +Y ++I   CK
Sbjct: 249 LEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 308

Query: 506 AGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
             K+ E   +F+EMLE+  +P+      ++++L      +EA  L
Sbjct: 309 EKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGL 353



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 27/99 (27%), Positives = 56/99 (56%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
            R+ EEML++   P+  TY++L++     G   EA+ ++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284


>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297317554|gb|EFH47976.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 533

 Score =  318 bits (814), Expect = 3e-84
 Identities = 148/257 (57%), Positives = 190/257 (73%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            A  +MD+ME+N ++PN+VTYGVMI A CKEKKSGEA N+ D+ML++ ++P S+LCCKVID
Sbjct: 278  AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVID 337

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPS 361
             LCED KV+EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEF+KGSIPS
Sbjct: 338  ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPS 397

Query: 362  VLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFE 541
            +LTYNTLI+GMCE+GEL EAGRLWDDM E+ C PN F+YN+LI G  K G   EGVR+ E
Sbjct: 398  LLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 457

Query: 542  EMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGE 721
            EMLE  C PNK T+ IL E L   G EE+A K++ +A  +G +  D + W +F  K  GE
Sbjct: 458  EMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKV--DKESWELFLNKFVGE 515

Query: 722  SDSWRHVFDGILSETDV 772
             D        +L E  V
Sbjct: 516  LDKGVLALKELLHEISV 532



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 40/131 (30%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 251 TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGR 427
           TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   RG+++ A R
Sbjct: 186 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKR 245

Query: 428 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 607
           + ++M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ TY +++ +L 
Sbjct: 246 VLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 305

Query: 608 GSGMEEEASKL 640
                 EA  +
Sbjct: 306 KEKKSGEARNM 316



 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
 Frame = +2

Query: 149 PSSALCCKVIDVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKL 328
           P+   C  ++  LC+   +E A  V  ++      P+    +T++     +G +  A+++
Sbjct: 187 PNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRV 246

Query: 329 FDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCK 505
            +E  ++G  P  +TY  L+ G C+ G   EA  + DDM +    PN  +Y ++I   CK
Sbjct: 247 LEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCK 306

Query: 506 AGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
             K+ E   +F+EML++  +P+      ++++L      +EA  L
Sbjct: 307 EKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGL 351



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 27/99 (27%), Positives = 56/99 (56%)
 Frame = +2

Query: 347 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 526
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243

Query: 527 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 643
            R+ EEML++   P+  TY++L++     G   EA+ ++
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVM 282


>ref|XP_004492340.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial-like [Cicer arietinum]
          Length = 545

 Score =  315 bits (807), Expect = 2e-83
 Identities = 154/261 (59%), Positives = 195/261 (74%), Gaps = 4/261 (1%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            AI++MD MEENGV+PN+VTYGVMIEAYCKEKKSGEA+NLL+DMLEK  VP  ALCCKV+D
Sbjct: 288  AIRVMDGMEENGVEPNEVTYGVMIEAYCKEKKSGEAVNLLEDMLEKDCVPGLALCCKVVD 347

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNA---ISSTLIYWVSKKGKIWEARKLFDEFEKGS 352
            +LCE+G VE AC+VW+ + RKNC+  +    + STLI+W+ KKGK+ EAR +F EF KGS
Sbjct: 348  LLCEEGNVESACEVWRMVSRKNCSSLDGGAVVVSTLIHWLCKKGKVLEARNMFAEFGKGS 407

Query: 353  IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
            I S+LTYNTLI+G+CE GEL EA +LWDDM+EKG VPN F+YNMLI GFCK G   EG+R
Sbjct: 408  IASLLTYNTLIAGLCEGGELCEAAKLWDDMLEKGVVPNAFTYNMLIKGFCKVGNVKEGIR 467

Query: 533  IFEEMLEKECVPNKFTYSILVES-LYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARK 709
            + EEML+  C+PNK TY IL++  L   GM++E +K++ +A S+G   +D D W +F + 
Sbjct: 468  VLEEMLQNGCLPNKSTYLILIDGLLLSGGMKQEINKVVSMAISTG---VDADMWNLFVKP 524

Query: 710  VTGESDSWRHVFDGILSETDV 772
            V    DS     D IL E  V
Sbjct: 525  VVDNVDSGAAEIDRILLENAV 545



 Score = 95.9 bits (237), Expect = 3e-17
 Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVI- 178
           A++    +E  G+ P+  +   ++ +  + K+   A  +  +  ++  V  + + C ++ 
Sbjct: 147 ALRTFLRIESFGIRPSVRSLNALLNSLVQNKRYRLAFLVFKNSRDRFGVLPNVVSCNILL 206

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGSI 355
             LC+  +VE A  V  ++      P+    +T++     +G +  A ++F E  ++G +
Sbjct: 207 KALCKGNEVEVAVRVLDEMSGMGLVPNVVSYTTVLGGYVWRGDMVGATRVFREVLDRGWV 266

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P V TY  L+ G C  G+L +A R+ D M E G  PN  +Y ++I  +CK  K+ E V +
Sbjct: 267 PDVTTYTVLLDGFCRLGKLVDAIRVMDGMEENGVEPNEVTYGVMIEAYCKEKKSGEAVNL 326

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLD 679
            E+MLEK+CVP       +V+ L   G  E A ++  + +      LD
Sbjct: 327 LEDMLEKDCVPGLALCCKVVDLLCEEGNVESACEVWRMVSRKNCSSLD 374


>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355498082|gb|AES79285.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  314 bits (805), Expect = 4e-83
 Identities = 151/256 (58%), Positives = 195/256 (76%), Gaps = 2/256 (0%)
 Frame = +2

Query: 2    AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEKKYVPSSALCCKVID 181
            AI++MD ME+NGV+PN+VTYGVMI+AYCKEKKSGEA+NL++DM+ K  V  S LCCKV+D
Sbjct: 280  AIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVD 339

Query: 182  VLCEDGKVEEACDVWKKLLRKNCTPDNAIS-STLIYWVSKKGKIWEARKLFDEFEKGSIP 358
            +LCE+G VE+AC++W+ + RKNC  + A+  STLI+W+ KKGK+ EAR +FDEF KGS+ 
Sbjct: 340  LLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVA 399

Query: 359  SVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIF 538
            S+LTYNTLI+G+CE GEL EA RLWDDMVEKG  PN F+YNMLI GFCK G A EG+R+ 
Sbjct: 400  SLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVL 459

Query: 539  EEMLEKECVPNKFTYSILVES-LYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVT 715
            EEMLE  C+PNK TY+IL++  L   GM++E +K++ LA S+G   +D D W IF + V 
Sbjct: 460  EEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTG---VDADLWNIFVKPVV 516

Query: 716  GESDSWRHVFDGILSE 763
            G  +      D IL E
Sbjct: 517  GNDNGGEAELDRILLE 532



 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 55/215 (25%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
 Frame = +2

Query: 2   AIKIMDEMEENGVDPNDVTYGVMIEAYCKEKKSGEALNLLDDMLEK-KYVPSSALCCKVI 178
           A+K    +E  G+ P+  +   ++ +  + K+   A  +  +  E+ + +P+   C  ++
Sbjct: 139 ALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILL 198

Query: 179 DVLCEDGKVEEACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGSI 355
             LC+  +VE A  V  ++      P+    +T++     +G +  A K+F E  ++G  
Sbjct: 199 KALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWS 258

Query: 356 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 535
           P V +Y  L+ G C  G+L +A R+ D M + G  PN  +Y ++I  +CK  K+ E V +
Sbjct: 259 PDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNL 318

Query: 536 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 640
            E+M+ K+ V        +V+ L   G  E+A ++
Sbjct: 319 IEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEM 353



 Score = 76.6 bits (187), Expect = 2e-11
 Identities = 40/144 (27%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
 Frame = +2

Query: 233 LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFE-KGSIPSVLTYNTLISG 391
           L+ KNC       P+    + L+  + K  ++  A K+ DE    G +P+V++Y T++ G
Sbjct: 176 LVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGG 235

Query: 392 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 571
              RG++  A +++ +++++G  P+V SY +L++GFC+ GK  + +R+ + M +    PN
Sbjct: 236 FVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPN 295

Query: 572 KFTYSILVESLYGSGMEEEASKLL 643
           + TY +++++        EA  L+
Sbjct: 296 EVTYGVMIQAYCKEKKSGEAVNLI 319



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 60/104 (57%)
 Frame = +2

Query: 353 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 532
           +P+V++ N L+  +C+  E++ A ++ D+M   G VPNV SY  ++ GF   G     ++
Sbjct: 188 LPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMK 247

Query: 533 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 664
           +F E+L++   P+  +Y++LV+     G   +A +++ +   +G
Sbjct: 248 VFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNG 291