BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00017508
         (4195 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1918   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1904   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1890   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1890   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1889   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1853   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1848   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1844   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1833   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1798   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1785   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1780   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1775   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1771   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1770   0.0  
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...  1770   0.0  
ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t...  1770   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1768   0.0  
ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III s...  1766   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1764   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1918 bits (4968), Expect = 0.0
 Identities = 946/1138 (83%), Positives = 1039/1138 (91%), Gaps = 3/1138 (0%)
 Frame = +3

Query: 126  SIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV 305
            SI K F + PVK  VDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+ I S V
Sbjct: 5    SIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSV 64

Query: 306  DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 485
            DP +YL++KDVRIGEPSIT D  +  L PH CRLSD TYAAPI+V+IEY  GSH +K  +
Sbjct: 65   DPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKTRV 124

Query: 486  TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 665
             KN++VIGRMPIMLRSC CVL +KDE ELARLGECPLDPGGYFVVKGTEKVILIQEQLSK
Sbjct: 125  EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 184

Query: 666  NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 845
            NRIII++DKKG + ASVTSSTE+TKSKTVIVM+KEKI+LQLN FT+ IPIM++MKAMGME
Sbjct: 185  NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 244

Query: 846  SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPR 1025
            SDQEVVQMVGR+PRY ALLLPS++ECA+  IYTQ+QALEFLE+KVK+  F N SLEKE R
Sbjct: 245  SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 304

Query: 1026 AMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQ 1205
             M ILRD F+ANVPVRQ NFRPKC+YVAVMLRRMM+AILNKDAMDDKDYVGNKRLELSGQ
Sbjct: 305  GMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELSGQ 364

Query: 1206 LISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAH---YLMRDIITHGLERAISTGN 1376
            LISLLFEDLFKTM SE+KK  D  LAKPSRSSR D +    +++RD IT GLER +STGN
Sbjct: 365  LISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLSTGN 424

Query: 1377 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRD 1556
            WD+KRF+MHRKGM+QV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP D
Sbjct: 425  WDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPCD 484

Query: 1557 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 1736
            TPEGEACGLVKNLALMTHVTTDE+E+PLISLCYSLGVEDLELLSGEELHT NSFL+IFNG
Sbjct: 485  TPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIFNG 544

Query: 1737 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1916
            LILGKHRRP+ FA A+RKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRP+VIADKG 
Sbjct: 545  LILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADKGK 604

Query: 1917 SRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 2096
            SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYE +A+PETTHIEIEPFT
Sbjct: 605  SRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEPFT 664

Query: 2097 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 2276
            ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+Y+LVYPQRPLLTTR
Sbjct: 665  ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLTTR 724

Query: 2277 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 2456
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SA+NQ+Y 
Sbjct: 725  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQRYE 784

Query: 2457 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSL 2636
            NN SDRI+RP +VG +AERMQILDDDGLA+PGEII+P+DIYINK+SPI T+  + S + L
Sbjct: 785  NNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPVGL 844

Query: 2637 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 2816
            PDSAYK + QT+KGP+GE +VVDRVAL SDK++NLC KF+IRHTRRPE+GDKFSSRHGQK
Sbjct: 845  PDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHGQK 904

Query: 2817 GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAF 2996
            GVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAF
Sbjct: 905  GVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAF 964

Query: 2997 GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 3176
            GEPSGHAD+VE IS+TLVK GFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 965  GEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDK 1024

Query: 3177 MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQV 3356
            MHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQV
Sbjct: 1025 MHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQV 1084

Query: 3357 CRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            CRVCGLLGY+NHKLK GICSTCKNGDNISTM+LPYACKLLFQELQ+MNVVPRLKLTEA
Sbjct: 1085 CRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLKLTEA 1142


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1904 bits (4932), Expect = 0.0
 Identities = 943/1147 (82%), Positives = 1034/1147 (90%), Gaps = 1/1147 (0%)
 Frame = +3

Query: 93   NNQSMGVSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 272
            NN +     E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 273  VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 452
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 453  TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 632
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 633  KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 812
            KVILIQEQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  KVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 251

Query: 813  IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 992
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 252  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 311

Query: 993  FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 1172
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 312  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 371

Query: 1173 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 1349
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 372  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 431

Query: 1350 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 1529
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 432  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 491

Query: 1530 QWGMLCPRDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 1709
            QWGMLCP DTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 492  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 551

Query: 1710 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1889
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 552  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 611

Query: 1890 PLVIADKGISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 2069
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 612  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 671

Query: 2070 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 2249
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 672  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 731

Query: 2250 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 2429
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 732  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 791

Query: 2430 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 2609
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 792  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 851

Query: 2610 DTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 2789
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 852  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 911

Query: 2790 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 2969
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 912  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 971

Query: 2970 GKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 3149
            G+FHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 972  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1031

Query: 3150 KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 3329
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1032 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1091

Query: 3330 SSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVP 3509
            SSDPFEVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VP
Sbjct: 1092 SSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVP 1151

Query: 3510 RLKLTEA 3530
            RLKL+EA
Sbjct: 1152 RLKLSEA 1158


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1890 bits (4895), Expect = 0.0
 Identities = 929/1137 (81%), Positives = 1027/1137 (90%)
 Frame = +3

Query: 120  EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 299
            E+  DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV AN+ I S
Sbjct: 13   EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVS 72

Query: 300  DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 479
             +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K 
Sbjct: 73   GIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKT 132

Query: 480  VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 659
             M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQL
Sbjct: 133  TMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQL 192

Query: 660  SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 839
            SKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG
Sbjct: 193  SKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMG 252

Query: 840  MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 1019
            +ESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E
Sbjct: 253  IESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE 312

Query: 1020 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 1199
             RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELS
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 1200 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 1379
            GQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 1380 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDT 1559
            D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP DT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 1560 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 1739
            PEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 1740 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1919
            ILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 1920 RIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 2099
            RIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTI
Sbjct: 613  RIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 2100 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 2279
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 2280 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 2459
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 2460 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLP 2639
            +TSDRI+RP R G  AERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR ++ S     
Sbjct: 793  STSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQT 852

Query: 2640 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 2819
            DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKG
Sbjct: 853  DSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKG 912

Query: 2820 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFG 2999
            VCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAFG
Sbjct: 913  VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 972

Query: 3000 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 3179
            EPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 973  EPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1032

Query: 3180 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 3359
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVC
Sbjct: 1033 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVC 1092

Query: 3360 RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            RVCGLLGY+NHKLK GICSTCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1093 RVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1890 bits (4895), Expect = 0.0
 Identities = 938/1147 (81%), Positives = 1029/1147 (89%), Gaps = 1/1147 (0%)
 Frame = +3

Query: 93   NNQSMGVSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 272
            NN +     E  +DKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI
Sbjct: 12   NNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKI 71

Query: 273  VAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEY 452
            V AN+ I S VDP +YL++KDVRIGEPS+T +  +  + PH CRLSD TYAAPI V+IEY
Sbjct: 72   VRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMTYAAPIFVNIEY 131

Query: 453  TNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTE 632
              GSH +K  + KN++VIGRMPIMLRSC CVL  KDE ELARLGECPLDPGGYFV+KG E
Sbjct: 132  IQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAE 191

Query: 633  KVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIP 812
            K     EQLSKNRIII++DKKG + ASVTSS+EATKSKTVI M+KEKIYL LN F   IP
Sbjct: 192  K-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIP 246

Query: 813  IMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFT 992
            IMV+MKAMGMESDQEVVQMVGRDP Y A+LLPSI+ECA   IYTQEQALE+LE KVKR  
Sbjct: 247  IMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVM 306

Query: 993  FSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDY 1172
            ++  + EKE RA+ ILRDVF+ANVPVR  NFRPKC+YVAVMLRRM+EAILNKDAMDDKDY
Sbjct: 307  YTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAILNKDAMDDKDY 366

Query: 1173 VGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM-RDIITHG 1349
            VGNKRLELSGQLISLLFEDLFKT  SE++K  DL L+KPSRSS LD + +L  R+ IT G
Sbjct: 367  VGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQFLRSRETITFG 426

Query: 1350 LERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPS 1529
            LER +STGN+D+KRFKMHRKGMTQVLARLSFI TLG+MTK+SPQFEKSRKVSGPRALQPS
Sbjct: 427  LERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSRKVSGPRALQPS 486

Query: 1530 QWGMLCPRDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTS 1709
            QWGMLCP DTPEGEACGLVKNLALMTHVTTDEDE PLISLCY LGVEDLELLSGEELHT 
Sbjct: 487  QWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDLELLSGEELHTP 546

Query: 1710 NSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCR 1889
            NSFLVI NGLILGKHRRP+HFA AMRKLRRAGK+GEFVSVFVNEKQ CVYIASDGGRVCR
Sbjct: 547  NSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCVYIASDGGRVCR 606

Query: 1890 PLVIADKGISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPET 2069
            PLVIADKG+SRIKEHHMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA PET
Sbjct: 607  PLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPET 666

Query: 2070 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 2249
            THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 667  THIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVY 726

Query: 2250 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 2429
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+
Sbjct: 727  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKR 786

Query: 2430 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 2609
             SA+NQKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR
Sbjct: 787  YSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTR 846

Query: 2610 DTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 2789
             +  SS SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GD
Sbjct: 847  GSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGD 906

Query: 2790 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 2969
            KFSSRHGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS 
Sbjct: 907  KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSC 966

Query: 2970 GKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 3149
            G+FHYGSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQ
Sbjct: 967  GRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQ 1026

Query: 3150 KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 3329
            KLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMI
Sbjct: 1027 KLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMI 1086

Query: 3330 SSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVP 3509
            SSDPFEVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VP
Sbjct: 1087 SSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVP 1146

Query: 3510 RLKLTEA 3530
            RLKL+EA
Sbjct: 1147 RLKLSEA 1153


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1889 bits (4893), Expect = 0.0
 Identities = 928/1137 (81%), Positives = 1027/1137 (90%)
 Frame = +3

Query: 120  EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 299
            E+  DKQ L+APVKS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGI+KIV AN+ I S
Sbjct: 13   EQLPDKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIVRANDRIVS 72

Query: 300  DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 479
             +DP ++L++KDVRIG+PS+T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K 
Sbjct: 73   GIDPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKT 132

Query: 480  VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 659
             M KN++VIGR+PIMLRSCRCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQL
Sbjct: 133  TMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQL 192

Query: 660  SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 839
            SKNR+II++DKKG + ASVTSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG
Sbjct: 193  SKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMG 252

Query: 840  MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 1019
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E
Sbjct: 253  MESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE 312

Query: 1020 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 1199
             RA  ILRDVF+ANVPV   NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELS
Sbjct: 313  GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELS 372

Query: 1200 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 1379
            GQL+SLLFEDLFKTM SE++K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+
Sbjct: 373  GQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNF 432

Query: 1380 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDT 1559
            D+KRFKMHRKGMTQVLARLSFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP DT
Sbjct: 433  DVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 492

Query: 1560 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 1739
            PEGEACGLVKNLALMTHVTTDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGL
Sbjct: 493  PEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGL 552

Query: 1740 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1919
            ILGKHRRPK FA  MRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGIS
Sbjct: 553  ILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGIS 612

Query: 1920 RIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 2099
            RIKEHHMKEL DGVR+F+DFLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTI
Sbjct: 613  RIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTI 672

Query: 2100 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 2279
            LGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 673  LGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRT 732

Query: 2280 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 2459
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN
Sbjct: 733  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYAN 792

Query: 2460 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLP 2639
            +TSDRI+RP R G  +ERMQILDDDGLA+PGEII+P+D+YINK+SP+ TR ++ S     
Sbjct: 793  STSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQT 852

Query: 2640 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 2819
            DS Y++A QTYKGP GET VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKG
Sbjct: 853  DSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKG 912

Query: 2820 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFG 2999
            VCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAFG
Sbjct: 913  VCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 972

Query: 3000 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 3179
            EPSGHAD VE+ISETLVK GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 973  EPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1032

Query: 3180 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 3359
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVC
Sbjct: 1033 HARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVC 1092

Query: 3360 RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            RVCGLLGY+NHKLK GICSTCKNG+NIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1093 RVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1149


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1853 bits (4800), Expect = 0.0
 Identities = 913/1138 (80%), Positives = 1015/1138 (89%), Gaps = 2/1138 (0%)
 Frame = +3

Query: 123  ESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSD 302
            + IDKQ L++P+K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IKKIV AN  I S 
Sbjct: 16   QGIDKQHLASPIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRSI 75

Query: 303  VDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNV 482
            +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+IEYT GSH + +V
Sbjct: 76   LDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIEYTTGSHGQTSV 135

Query: 483  MTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLS 662
             TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KGTEKVILIQEQLS
Sbjct: 136  STKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLS 195

Query: 663  KNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGM 842
            KNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   +PIMV+MKAMGM
Sbjct: 196  KNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGM 255

Query: 843  ESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEK 1016
            ESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ QALEFLE  K +K  ++S   +EK
Sbjct: 256  ESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQALEFLESDKMLKMPSYSTGPVEK 315

Query: 1017 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 1196
              RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKRLEL
Sbjct: 316  GARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 375

Query: 1197 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGN 1376
            SGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D IT GLER +STGN
Sbjct: 376  SGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIVKDSITMGLERTLSTGN 435

Query: 1377 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRD 1556
            WD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQ+GMLCP D
Sbjct: 436  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCD 495

Query: 1557 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 1736
            TPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EELH   S+L+  NG
Sbjct: 496  TPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNG 555

Query: 1737 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1916
            LILGKH+ P+ FA AMR+LRRAGKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+
Sbjct: 556  LILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGV 615

Query: 1917 SRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 2096
            SRIKEHHM+EL+DGVR F+ FL++GL+EYLDVNE+NN LIALYE EA PETTHIEIEPFT
Sbjct: 616  SRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATPETTHIEIEPFT 675

Query: 2097 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 2276
            ILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTR
Sbjct: 676  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTR 735

Query: 2277 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 2456
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SAI QKY 
Sbjct: 736  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAICQKYE 795

Query: 2457 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSL 2636
            N TSDRII+PQR G EA++MQILDDDG+A+PGE IR HDIYINK+SP  TR  +TS M L
Sbjct: 796  NGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHDIYINKESPTVTRTPITSPMGL 855

Query: 2637 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 2816
            PDSAYKT+ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPEIGDKFSSRHGQK
Sbjct: 856  PDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPEIGDKFSSRHGQK 915

Query: 2817 GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAF 2996
            GVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS G+FHYGSAF
Sbjct: 916  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 975

Query: 2997 GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 3176
            GEPSGHAD V++ISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDK
Sbjct: 976  GEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDK 1035

Query: 3177 MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQV 3356
            MHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ERLMISSDPFEVQV
Sbjct: 1036 MHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1095

Query: 3357 CRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            CR CGLLGY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1096 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1153


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1848 bits (4788), Expect = 0.0
 Identities = 909/1138 (79%), Positives = 1015/1138 (89%), Gaps = 2/1138 (0%)
 Frame = +3

Query: 123  ESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSD 302
            + IDKQ L++ +K+ VDK+QL+PEFLKVRGLVKQHLDSFNYFV T IKKIV AN  I S 
Sbjct: 46   QGIDKQHLASHIKNLVDKYQLVPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANQEIRST 105

Query: 303  VDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNV 482
            +DP +YL+Y+DV IGEPS+  D  T  L P  CRLSD TYAAPI V+I+YT GSH + +V
Sbjct: 106  LDPNIYLRYRDVHIGEPSMVFDAVTEKLCPQKCRLSDRTYAAPIYVTIDYTTGSHGQTSV 165

Query: 483  MTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLS 662
             TK N++IGRMPIMLRS  CVL  KDEDELARLGECPLDPGGYFV+KGTEKVILIQEQLS
Sbjct: 166  STKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLDPGGYFVIKGTEKVILIQEQLS 225

Query: 663  KNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGM 842
            KNRIII++DKKG + ASVTSSTE TKSKT+I M+KEK+YL+LN F   +PIMV+MKAMGM
Sbjct: 226  KNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGM 285

Query: 843  ESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEK 1016
            ESDQEVVQM+GRDPR+ ALLLPSI+ECA   +YTQ+QALEFLE  K +K  ++S   +EK
Sbjct: 286  ESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQALEFLESDKMLKMPSYSTGPIEK 345

Query: 1017 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 1196
              RA+ ILRD+F+ANVPV Q NFR KCIYVAVM+RRMMEAILNKDAMDDKDYVGNKRLEL
Sbjct: 346  GARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMMEAILNKDAMDDKDYVGNKRLEL 405

Query: 1197 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGN 1376
            SGQL+SLLFEDLFKTMN E ++  D  LA+PSRSSRLDI+ Y+++D IT GLER +STGN
Sbjct: 406  SGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDISQYIIKDSITMGLERTLSTGN 465

Query: 1377 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRD 1556
            WD+KRF+MHRKGMTQV+ARLS+I +LGHMTKISPQFEKSRKVSGPRALQPSQ+GMLCP D
Sbjct: 466  WDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQFGMLCPCD 525

Query: 1557 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 1736
            TPEGEACGLVKNLALMTHVTTDEDE P++SLCY LGVEDLE LS EELH   S+L+  NG
Sbjct: 526  TPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVEDLEQLSPEELHMPTSYLITLNG 585

Query: 1737 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1916
            LILGKH+ P+ FA AMR+LRRAGK+GEFVS+FVNEKQ CVYIASDGGRVCRPLVIADKG+
Sbjct: 586  LILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRCVYIASDGGRVCRPLVIADKGV 645

Query: 1917 SRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFT 2096
            SRIKEHHM+EL+DG+R F+ FL++GL+EYLDVNE+NN LIALYE EA PETTHIEIEPFT
Sbjct: 646  SRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTLIALYEKEATPETTHIEIEPFT 705

Query: 2097 ILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTR 2276
            ILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTR
Sbjct: 706  ILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTR 765

Query: 2277 TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYA 2456
            TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK SAI QKY 
Sbjct: 766  TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYSAICQKYE 825

Query: 2457 NNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSL 2636
            N TSDRII+PQR G EA+RMQILDDDG+A+PGE IR HDIYINK+SP  TR  VTS M L
Sbjct: 826  NGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHDIYINKESPTVTRTPVTSPMGL 885

Query: 2637 PDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQK 2816
            PDSAYK++ QTYKGP+GETAVVDRVAL+SD++NNL  KF+IRHTRRPE+GDKFSSRHGQK
Sbjct: 886  PDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKFMIRHTRRPELGDKFSSRHGQK 945

Query: 2817 GVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAF 2996
            GVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS G+FHYGSAF
Sbjct: 946  GVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 1005

Query: 2997 GEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDK 3176
            GEPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHMV+DK
Sbjct: 1006 GEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVVDK 1065

Query: 3177 MHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQV 3356
            MHAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I+ERLMISSDPFEVQV
Sbjct: 1066 MHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1125

Query: 3357 CRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            CR CGLLGY+N+KLKTGICS CKNG+NISTM+LPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1126 CRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKLLFQELQSMNIVPRLKLAEA 1183


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1844 bits (4776), Expect = 0.0
 Identities = 916/1151 (79%), Positives = 1019/1151 (88%), Gaps = 4/1151 (0%)
 Frame = +3

Query: 90   TNNQSMGVSG---EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTG 260
            + N+ +G +    +  IDKQF+  P+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVNT 
Sbjct: 10   SKNEKLGDNSNPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTE 69

Query: 261  IKKIVAANNLITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIV 440
            IKKIV AN+ I S  DP +YL++ DVRIGEPS+T +  +  + PHMCRLSD TYAAPI+V
Sbjct: 70   IKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILV 129

Query: 441  SIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVV 620
             IEY   SH +K    K ++VIGRMPIMLRS  CVL+ KDE ELARLGECPLDPGGYF++
Sbjct: 130  DIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFII 189

Query: 621  KGTEKVILIQEQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFT 800
            KGTEKV+LIQEQLSKNRIII++DKKG + ASVTSSTEATKSKTVI M+ EKIYLQLN FT
Sbjct: 190  KGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFT 249

Query: 801  A-MIPIMVIMKAMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKK 977
               IPIMV++KAMGMES QEVVQMVGRDPRYGALLLPSI+ECA   IYTQEQALE+LE K
Sbjct: 250  TPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETK 309

Query: 978  VKRFTFSNASLEKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAM 1157
            VK+F F++A  EKE RA+ ILRDVF+ANVPV + NF PKCIYVAVM+RRMM+AIL+KDAM
Sbjct: 310  VKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAM 369

Query: 1158 DDKDYVGNKRLELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI 1337
            DDKDYVGNKRLELSGQLISLLFEDLFKTM SE+KK  D  L K SRSSR D + +L  +I
Sbjct: 370  DDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNI 429

Query: 1338 ITHGLERAISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRA 1517
            I+ GLER +STGNWD+KRF+MHRKGM+QVLARLSFI+T+GH+T++SPQFEKSRKVSGPRA
Sbjct: 430  ISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRA 489

Query: 1518 LQPSQWGMLCPRDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEE 1697
            LQPSQWGMLCP DTPEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLS EE
Sbjct: 490  LQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEE 549

Query: 1698 LHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGG 1877
            LHT NSFLVIFNG ILGKHRRP++FA  MR LRRAGKIGEFVSVFVNEKQ CVYIASDGG
Sbjct: 550  LHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGG 609

Query: 1878 RVCRPLVIADKGISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEA 2057
            RVCRPLVIADKG+SRIKE+HMKEL DGVRTF+DFLR+GL+EYLDVNE+NNALIALYEGEA
Sbjct: 610  RVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEA 669

Query: 2058 EPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIY 2237
             PETTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y
Sbjct: 670  TPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLY 729

Query: 2238 MLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 2417
            +LVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 730  LLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 789

Query: 2418 VMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSP 2597
            V KK S++NQKY NNT+DRI+RP R       MQILDDDGLA+PGEIIRP+DIY+NKQSP
Sbjct: 790  VFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSP 849

Query: 2598 INTRDTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRP 2777
            I  + +      +PD+AY+   Q +KG +GE  VVDRVAL +DK++ LC KF+IR TRRP
Sbjct: 850  IIMKGSPLP--GIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRP 907

Query: 2778 EIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKA 2957
            E+GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKA
Sbjct: 908  ELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKA 967

Query: 2958 GVSSGKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGP 3137
            GVS G+FHYGSAFGEPSGHAD+V+AISETL+K+GFSY+GKDFLYSG  G PLQAYIFMGP
Sbjct: 968  GVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGP 1027

Query: 3138 IYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFE 3317
            IYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+E
Sbjct: 1028 IYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 1087

Query: 3318 RLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSM 3497
            RLMISSDPFEVQVCRVCGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKLL QELQSM
Sbjct: 1088 RLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSM 1147

Query: 3498 NVVPRLKLTEA 3530
            N+VPRLKL EA
Sbjct: 1148 NIVPRLKLAEA 1158


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1833 bits (4749), Expect = 0.0
 Identities = 907/1137 (79%), Positives = 1011/1137 (88%)
 Frame = +3

Query: 120  EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 299
            E+ IDKQ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+ I S
Sbjct: 19   EQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVS 78

Query: 300  DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 479
             VDPG+YL++KDVRIG PS   D  +  L+PHMCRLSD TYAAPI+V++EY  GSHD+K 
Sbjct: 79   TVDPGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKT 138

Query: 480  VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 659
             + KN++VIGRMPIMLRS  CVL  KDE ELARLGECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 139  RVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQL 198

Query: 660  SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 839
            SKNRIII++DKKG + ASVTSSTEATKSKT+I M+KEK+YL LN F   IPIMV++KAMG
Sbjct: 199  SKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMG 258

Query: 840  MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 1019
            MESDQEVVQMVGRDPRY ALLLPSI+ECA  +IYTQ++ALE+L+ K             E
Sbjct: 259  MESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK-------------E 305

Query: 1020 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 1199
             RA+ ILRDVF+ANVPV + NFRPKC+YVAVMLRRMMEA+LNKDAMDDKDYVGNKRLELS
Sbjct: 306  NRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELS 365

Query: 1200 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 1379
            GQLISLLFEDLFKTM +E+++  D  L K +RSSR D+A Y++RD IT+GLER +STGN+
Sbjct: 366  GQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNF 425

Query: 1380 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDT 1559
            D+KRFKMHRKGMTQVL RLS+IA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCP DT
Sbjct: 426  DVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDT 485

Query: 1560 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 1739
            PEGEACGLVKNLALMTHVTTD++E PLISLCY LGVEDLELLSGEELHT NSFLVIFNGL
Sbjct: 486  PEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGL 545

Query: 1740 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1919
            ILGKHRRP++F  +MRKLRRAGKIGEFVSVFVNEKQ  VY+ASDGGRVCRPLVIAD+G+S
Sbjct: 546  ILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVS 605

Query: 1920 RIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 2099
            RIKEHHMKEL+DGVRTF+DFLR+GL+EYLDVNE+NNAL+ALYEGEA PETTHIEIEPFTI
Sbjct: 606  RIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTI 665

Query: 2100 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 2279
            LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL+RMD+L+Y+LVYPQRPLLTTRT
Sbjct: 666  LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRT 725

Query: 2280 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 2459
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK  AI QKY N
Sbjct: 726  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYEN 785

Query: 2460 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLP 2639
              SDRI+RP R     ER ++LD DGLA+PGEII+P DIY+ K+ PI+T   V SS +L 
Sbjct: 786  GASDRILRPDRT---VERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALE 842

Query: 2640 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 2819
            +  Y+ +  +YKGP+GE+ V+DRVAL SD++NNLC K +IRHTRRPE+GDKFSSRHGQKG
Sbjct: 843  NIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKG 902

Query: 2820 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFG 2999
            VCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAFG
Sbjct: 903  VCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFG 962

Query: 3000 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 3179
            EPSGHAD VEAISETLV +GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 963  EPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1022

Query: 3180 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 3359
            HAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPFEVQVC
Sbjct: 1023 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 1082

Query: 3360 RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            RVCGLLGYFN KL+ GICSTCKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1083 RVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1139


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1798 bits (4656), Expect = 0.0
 Identities = 891/1141 (78%), Positives = 1002/1141 (87%), Gaps = 3/1141 (0%)
 Frame = +3

Query: 117  GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLIT 296
            G+   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV AN+LI 
Sbjct: 27   GDSGFDQRVLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANDLIV 86

Query: 297  SDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKK 476
            +   P +YL++ +V IG+PSI  D  T  LTP  CRLSD TYAAPI   +EYT GSHDK 
Sbjct: 87   ASRYPHIYLRFLNVGIGKPSIMIDEVTEDLTPQTCRLSDLTYAAPICADVEYTLGSHDKP 146

Query: 477  NVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQ 656
            ++  K  + IGRMPIMLRSC CVL+ +DE ELA+LGECPLDPGGYFV+KGTEKVILIQEQ
Sbjct: 147  DIKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQ 206

Query: 657  LSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAM 836
            LSKNRIII++DKKG + ASVTSSTE  K+KTV+VM+KEK++LQLN F   +P+MV+MKAM
Sbjct: 207  LSKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLWLQLNKFPKKVPLMVVMKAM 266

Query: 837  GMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEK 1016
            GMESDQEV QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L+K VKR T+SN + EK
Sbjct: 267  GMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQALEYLDKLVKRPTYSNNAAEK 326

Query: 1017 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 1196
            E  A   LRDVF+ANVPV Q NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLEL
Sbjct: 327  EGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 386

Query: 1197 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAIST 1370
            SGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L R   IIT GLER +ST
Sbjct: 387  SGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICTLLTRTRSIITLGLERTLST 446

Query: 1371 GNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1550
            GN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 447  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 506

Query: 1551 RDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIF 1730
             DTPEGE+CGLVKNLALMTHVTTDE+E PLISLC SLGVED++ LS EELHT +SFLVIF
Sbjct: 507  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVEDMKDLSAEELHTPDSFLVIF 566

Query: 1731 NGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADK 1910
            NGLILGKHRRP HFA A+RKLRRAGKIGEFVSV+VNEKQ CVY+ASDGGRVCRPLVIADK
Sbjct: 567  NGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 626

Query: 1911 GISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEP 2090
            GISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 627  GISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 686

Query: 2091 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLT 2270
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLT
Sbjct: 687  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 746

Query: 2271 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQK 2450
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +AI QK
Sbjct: 747  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 806

Query: 2451 YANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVT-SS 2627
            ++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYINKQSPI+TR   T S+
Sbjct: 807  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 866

Query: 2628 MSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRH 2807
             +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+IRHTRRPE+GDKFSSRH
Sbjct: 867  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 924

Query: 2808 GQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYG 2987
            GQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYG
Sbjct: 925  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 984

Query: 2988 SAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMV 3167
            SAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMV
Sbjct: 985  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1044

Query: 3168 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3347
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1045 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1104

Query: 3348 VQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTE 3527
            VQVC  CGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1105 VQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 1164

Query: 3528 A 3530
            A
Sbjct: 1165 A 1165


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 878/1147 (76%), Positives = 1003/1147 (87%), Gaps = 13/1147 (1%)
 Frame = +3

Query: 129  IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 308
            I+K+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNY +N GIKKIV AN LITS  D
Sbjct: 17   INKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYLINVGIKKIVKANCLITSTAD 76

Query: 309  PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 488
            P +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH +K    
Sbjct: 77   PSIYLRFKAVRVGEPSILNINMAEQINPHMCRLADMTYAAPIHVNIEYVHGSHGEKQTSA 136

Query: 489  KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 668
            KNN++IGRMPIMLRSCRCVLN KDEDELARLGECPLDPGGYFV+KGTEKV+LIQEQLSKN
Sbjct: 137  KNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 669  RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 848
            RIII+SDKKG + ASVTSSTE TKSKTVI M+KE+IYL L+ F   IPI++++KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIYLFLHQFVKKIPIIIVLKAMGMES 256

Query: 849  DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 1028
            DQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++    L+K+ RA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYG-PPLQKDGRA 315

Query: 1029 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 1208
            + ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL
Sbjct: 316  LYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 1209 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLK 1388
            ISLLFEDLFKTM +E  K  D+ L K +R+SR D +  L  DII+ GLER +STGN+D+K
Sbjct: 376  ISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQCLSGDIISLGLERTLSTGNFDIK 435

Query: 1389 RFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDTPEG 1568
            RF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCP DTPEG
Sbjct: 436  RFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEG 495

Query: 1569 EACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILG 1748
            E+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVI NGLILG
Sbjct: 496  ESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILG 555

Query: 1749 KHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 1928
            KHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCRPLVIADKGISR+K
Sbjct: 556  KHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGISRVK 615

Query: 1929 EHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE-------------T 2069
            +HHMKELQDGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E             T
Sbjct: 616  QHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATTELDEGGEAAKIRADT 675

Query: 2070 THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVY 2249
            THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVY
Sbjct: 676  THIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVY 735

Query: 2250 PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 2429
            PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK
Sbjct: 736  PQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK 795

Query: 2430 LSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTR 2609
            + A +QKY NNT DRI+RPQR G +AE+MQILD+DG+ASPGEIIRP+D+YINKQSP++T+
Sbjct: 796  IVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIASPGEIIRPNDVYINKQSPVDTK 855

Query: 2610 DTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGD 2789
            + +T+ +S  DS Y+ A + +KGP+GET VVDRVAL S+K ++LC K+IIRHTRRPE+GD
Sbjct: 856  NKMTTQLS--DSQYRPAREYFKGPEGETQVVDRVALCSNKHDHLCIKYIIRHTRRPELGD 913

Query: 2790 KFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSS 2969
            KFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG KAGVS 
Sbjct: 914  KFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSC 973

Query: 2970 GKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQ 3149
            G+FHYGSAFGE  GHAD+VE IS TLV KGFSYSGKD LYSG  G PLQAYIFMGPIYYQ
Sbjct: 974  GRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLYSGISGEPLQAYIFMGPIYYQ 1033

Query: 3150 KLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMI 3329
            KLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ERLM+
Sbjct: 1034 KLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMV 1093

Query: 3330 SSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVP 3509
            SSDPFEVQVCR CGLLGY+++KLK   CSTCKNGDNI+TM+LPYACKLLFQELQSMNVVP
Sbjct: 1094 SSDPFEVQVCRACGLLGYYSYKLKKAFCSTCKNGDNIATMKLPYACKLLFQELQSMNVVP 1153

Query: 3510 RLKLTEA 3530
            RLKL EA
Sbjct: 1154 RLKLIEA 1160


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1780 bits (4611), Expect = 0.0
 Identities = 878/1156 (75%), Positives = 1005/1156 (86%), Gaps = 16/1156 (1%)
 Frame = +3

Query: 111  VSGEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNL 290
            ++ +  +D+Q LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYFVN GIKKIV AN+L
Sbjct: 11   INDDHFVDRQKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFVNVGIKKIVRANSL 70

Query: 291  ITSDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHD 470
            ITS +DP +YL++K+VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH 
Sbjct: 71   ITSSLDPEIYLRFKEVRVGEPSILNVNMAEEINPHMCRLADMTYAAPIYVNIEYAHGSHG 130

Query: 471  KKNVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQ 650
            K     K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQ
Sbjct: 131  KTQHSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQ 190

Query: 651  EQLSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMK 830
            EQLSKNRIII+SDKKG + ASVTSSTE TKSKTVI M+K KIYL L+ F   IPI++++K
Sbjct: 191  EQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIYLFLHQFVKKIPIIIVLK 250

Query: 831  AMGMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASL 1010
            AMGMESDQE+VQMVGRDPR+ A LLPSI+EC +  + T++QAL++LE KVK+ ++     
Sbjct: 251  AMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQALDYLEAKVKKTSYGPPP- 309

Query: 1011 EKEPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRL 1190
            EK+ RA+ ILRDVF+A+VPVR  NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRL
Sbjct: 310  EKDGRALYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL 369

Query: 1191 ELSGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERA 1361
            ELSGQLISLLFEDLFKTM +E  K  D  L KP+R+SR D +  L  +    I+ GLER 
Sbjct: 370  ELSGQLISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQCLTGEKNHNISFGLERT 429

Query: 1362 ISTGNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGM 1541
            +STGN+D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGM
Sbjct: 430  LSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGM 489

Query: 1542 LCPRDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFL 1721
            LCP DTPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFL
Sbjct: 490  LCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFL 549

Query: 1722 VIFNGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVI 1901
            VIFNGLILGKHRRP++FA ++R+LRRAGKIGEFVSVF+NEKQ CVY+ASDGGRVCRPLVI
Sbjct: 550  VIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGGRVCRPLVI 609

Query: 1902 ADKGISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE----- 2066
            ADKG+SR+K+HHMKELQDGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +A  E     
Sbjct: 610  ADKGVSRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDATSEMAETA 669

Query: 2067 --------TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRM 2222
                    TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RM
Sbjct: 670  EAAKIREGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRM 729

Query: 2223 DTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRG 2402
            DTL+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GYDIEDAIVMNK+SLDRG
Sbjct: 730  DTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRG 789

Query: 2403 FGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYI 2582
            FGRCIVMKK+ A  QKY N+  DRI+RPQR G +AE+MQILDDDG+A+PGEIIRP+D+YI
Sbjct: 790  FGRCIVMKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPGEIIRPNDVYI 849

Query: 2583 NKQSPINTRDTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIR 2762
            NKQ P++TRD +TS +S  DS Y+ A + +KGP+GET VVDRVAL SDK+ NLC K+IIR
Sbjct: 850  NKQIPVDTRDNITSPLS--DSQYRPAREYFKGPEGETQVVDRVALCSDKNGNLCIKYIIR 907

Query: 2763 HTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIEL 2942
            HTRRPE+GDKFSSRHGQKGVCG IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIEL
Sbjct: 908  HTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIEL 967

Query: 2943 LGGKAGVSSGKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAY 3122
            LG KAGV SG+FHYGSAFGE SGHAD+VE IS TLVK GFSYSGKD LYSG  G PLQ Y
Sbjct: 968  LGSKAGVCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKDLLYSGLSGEPLQTY 1027

Query: 3123 IFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGAS 3302
            +FMGPIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGAS
Sbjct: 1028 VFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGAS 1087

Query: 3303 MMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQ 3482
            M+I+ERLMISSDPFEVQVCR CGLLGY+N+KLK   CSTCKNGDNI+TM+LPYACKLLFQ
Sbjct: 1088 MLIYERLMISSDPFEVQVCRTCGLLGYYNYKLKKAFCSTCKNGDNIATMKLPYACKLLFQ 1147

Query: 3483 ELQSMNVVPRLKLTEA 3530
            ELQSMNVVPRLKL EA
Sbjct: 1148 ELQSMNVVPRLKLVEA 1163


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1775 bits (4598), Expect = 0.0
 Identities = 875/1134 (77%), Positives = 984/1134 (86%)
 Frame = +3

Query: 129  IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 308
            IDK+ L+AP+KS  DKF L+PEFLKVRGLVKQHLDSFNYFVNTGIKKIV AN+ I S VD
Sbjct: 33   IDKELLAAPIKSAKDKFALIPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANDRIVSGVD 92

Query: 309  PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 488
            P ++L++ +V I  PS+T D  T  + PH CRLSD TY+API V +EY  GSHD+K + T
Sbjct: 93   PSIWLRFNNVYIDRPSLTTDGVTTEIAPHTCRLSDMTYSAPIRVDVEYVEGSHDQKMIAT 152

Query: 489  KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 668
            +  I IGR+PIMLRSC C L  K E ELA LGECPLDPGGYF++KG EKV+LIQEQLSKN
Sbjct: 153  RKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLDPGGYFIIKGNEKVLLIQEQLSKN 212

Query: 669  RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 848
            RIII+ DKKG + ASVTSS+E  KSKT+I M+K+KIYL+LN F+  IPIMV+MKAMGM S
Sbjct: 213  RIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIYLELNQFSKKIPIMVVMKAMGMTS 272

Query: 849  DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 1028
            DQEVVQMVGRDPRYGALL+PSI+ECA   IYT+EQAL +LE KVKR  F +AS +K+ + 
Sbjct: 273  DQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQALLYLEPKVKRSMFDSASSDKDSKV 332

Query: 1029 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 1208
            M +LRD+F+ANVPVR+ NFRPKCIYVAVMLRR+M+AILNKD MDDKDYVGNKRLELSGQ 
Sbjct: 333  MAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAILNKDTMDDKDYVGNKRLELSGQS 392

Query: 1209 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLK 1388
            ISLLFEDLFKTM SE++K  D  L KPSRSSR D+A Y+ +D I+ GLER +STGN+DLK
Sbjct: 393  ISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQYIRKDQISLGLERTLSTGNFDLK 452

Query: 1389 RFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDTPEG 1568
            RFKMHR GMTQVLARLSFI +LG MT+  PQFEKSRKVSGPRALQPSQWGMLCP DTPEG
Sbjct: 453  RFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRKVSGPRALQPSQWGMLCPCDTPEG 512

Query: 1569 EACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILG 1748
            EACGLVKNLALM HVTTDE+E PLISLC  LGVEDLE LS EELH+ NSFLV+FNG ILG
Sbjct: 513  EACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLETLSAEELHSPNSFLVLFNGDILG 572

Query: 1749 KHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIK 1928
            KHR+P+  A AMRKLRRAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISR+K
Sbjct: 573  KHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGISRVK 632

Query: 1929 EHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGV 2108
            E+HM+EL  GVRTF+DFL +GL+EYLDVNEQNNALIALYE EA  ETTHIEIEPFTILGV
Sbjct: 633  EYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIALYEDEATTETTHIEIEPFTILGV 692

Query: 2109 CAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIEL 2288
             AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R+D L+Y+LVYPQRPLLTT+TIEL
Sbjct: 693  IAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRID-LLYLLVYPQRPLLTTKTIEL 751

Query: 2289 VGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTS 2468
            VG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI+MKK    NQ Y+NNT 
Sbjct: 752  VGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCILMKKFVVANQNYSNNTQ 811

Query: 2469 DRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLPDSA 2648
            DRII+P +   ++ +M++LDDDG+A+PGEII  +DIY+ KQ PI TR  + S   L DS 
Sbjct: 812  DRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIYVKKQVPIVTRGAIRS--GLKDSD 869

Query: 2649 YKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCG 2828
            Y++  Q YKGP GE+ VVD+VALFSDK NNLC K +IRHTRRPE+GDKFSSRHGQKGVCG
Sbjct: 870  YRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRHTRRPEVGDKFSSRHGQKGVCG 929

Query: 2829 IIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFGEPS 3008
             IVQQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAFGEPS
Sbjct: 930  TIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPS 989

Query: 3009 GHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHAR 3188
            GHAD+VEAISETLV+ GFSY GKD++ SG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR
Sbjct: 990  GHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHAR 1049

Query: 3189 ARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRVC 3368
              GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM+++ERLMISSDPFEVQVCRVC
Sbjct: 1050 GSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASMLLYERLMISSDPFEVQVCRVC 1109

Query: 3369 GLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            GLLGY+NHK+K GICS+CKNGDNISTM+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1110 GLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA 1163


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1771 bits (4588), Expect = 0.0
 Identities = 880/1152 (76%), Positives = 999/1152 (86%), Gaps = 18/1152 (1%)
 Frame = +3

Query: 129  IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 308
            IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GIKKIV AN  I S  D
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCRIASVTD 76

Query: 309  PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 488
            P +YL++K+VR+GEPSI     +  + PHMCRL+D TYAAPI V+IEY +GSH KK    
Sbjct: 77   PSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHGKKATSV 136

Query: 489  KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 668
            KN+ +IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYFV+KGTEKV+LIQEQLSKN
Sbjct: 137  KNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 669  RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 848
            RIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMES 256

Query: 849  DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 1028
            DQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     EK+ RA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPP-EKDGRA 315

Query: 1029 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 1208
            + ILRD+F+A+VPVR  NFR KC YV VMLRRM+EA+LNKD+MDDKDYVGNKRLELSGQL
Sbjct: 316  LYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQL 375

Query: 1209 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLM----RDIITHGLERAISTGN 1376
            +SLLFEDLFKTM SE  K  D  L+KPSR+SR D + YL     ++ I+ GLER +STGN
Sbjct: 376  MSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGN 435

Query: 1377 WDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRD 1556
            +D+KRF+MHRKGMTQVL RLSFI +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCP D
Sbjct: 436  FDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCD 495

Query: 1557 TPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNG 1736
            TPEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVI NG
Sbjct: 496  TPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNG 555

Query: 1737 LILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGI 1916
            LILGKHRRP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASDGGRVCRPLVIADKGI
Sbjct: 556  LILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGI 615

Query: 1917 SRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPE---------- 2066
            SR+K+HHMKELQDGVRTF+DF+R+GL+EYLDVNE+NNALIALYE EA  E          
Sbjct: 616  SRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEGAEAAKI 675

Query: 2067 ---TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIY 2237
               TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y
Sbjct: 676  KADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLY 735

Query: 2238 MLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCI 2417
            +LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDRGFGRCI
Sbjct: 736  LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDRGFGRCI 795

Query: 2418 VMKKLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSP 2597
            VMKK+ A  QKY N T DRI+ PQR G +AE+MQILDDDG+ASPGEIIRP+D+YI KQ P
Sbjct: 796  VMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYIYKQIP 855

Query: 2598 I-NTRDTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRR 2774
            +  TRD +TS +S  DS Y+ A + +KGP+GET VVDRVAL SDK  +LC K+IIRHTRR
Sbjct: 856  VCTTRDKITSPLS--DSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYIIRHTRR 913

Query: 2775 PEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGK 2954
            PE+GDKFSSRHGQKGVCG I+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG K
Sbjct: 914  PELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSK 973

Query: 2955 AGVSSGKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMG 3134
            AGVS G+FHYGSAFGE SGHAD+VE IS+TLV KGFSYSGKD LYSG  G PL+AYIFMG
Sbjct: 974  AGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSGKDLLYSGLSGEPLEAYIFMG 1033

Query: 3135 PIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIF 3314
            PIYYQKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+
Sbjct: 1034 PIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIY 1093

Query: 3315 ERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQS 3494
            ERLMISSDPFEVQVCR CGLLGY+N+KLK  +CSTCKNGDNI+TM+LPYACKLLFQELQS
Sbjct: 1094 ERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQELQS 1153

Query: 3495 MNVVPRLKLTEA 3530
            MNVVPRLKL EA
Sbjct: 1154 MNVVPRLKLVEA 1165


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1770 bits (4585), Expect = 0.0
 Identities = 869/1058 (82%), Positives = 957/1058 (90%)
 Frame = +3

Query: 357  ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 536
            +T D  +  L PHMCRLSD TYAAPI+V+IEY  GSH +K  M KN++VIGR+PIMLRSC
Sbjct: 1    MTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSC 60

Query: 537  RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 716
            RCVL  KDE ELARLGECPLDPGGYF++KGTEKV+LIQEQLSKNR+II++DKKG + ASV
Sbjct: 61   RCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASV 120

Query: 717  TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 896
            TSSTE  KSKTVI M+K K+YL LN F   IPIMV+MKAMG+ESDQEVVQMVGRDPRY A
Sbjct: 121  TSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSA 180

Query: 897  LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 1076
            LLLPSI+ECA  +IYTQE+ALE+LE KVKR TF +   ++E RA  ILRDVF+ANVPV  
Sbjct: 181  LLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHN 240

Query: 1077 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 1256
             NFRPKC YVAVMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL+SLLFEDLFKTM SE+
Sbjct: 241  NNFRPKCFYVAVMLRRMVEAMLNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEV 300

Query: 1257 KKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNWDLKRFKMHRKGMTQVLARL 1436
            +K  D+ L+KPSRSSR D++ +++RD IT GLER +STGN+D+KRFKMHRKGMTQVLARL
Sbjct: 301  QKTVDIILSKPSRSSRFDLSQFIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARL 360

Query: 1437 SFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDTPEGEACGLVKNLALMTHVT 1616
            SFI TLGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP DTPEGEACGLVKNLALMTHVT
Sbjct: 361  SFIGTLGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVT 420

Query: 1617 TDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKLR 1796
            TDE+E PLISLCY LGVEDLELLSGEELH  NSFLVIFNGLILGKHRRPK FA  MRKLR
Sbjct: 421  TDEEEGPLISLCYCLGVEDLELLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLR 480

Query: 1797 RAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELQDGVRTFND 1976
            RAGKIGEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKGISRIKEHHMKEL DGVR+F+D
Sbjct: 481  RAGKIGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDD 540

Query: 1977 FLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPRN 2156
            FLREGL+EYLDVNE+NNALIALYEG+A P+TTHIEIEPFTILGV AGLIP+PHHNQSPRN
Sbjct: 541  FLREGLIEYLDVNEENNALIALYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRN 600

Query: 2157 TYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 2336
            TYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTTRTIELVGYDKLGAGQNATVAV
Sbjct: 601  TYQCAMGKQAMGNIAFNQLCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAV 660

Query: 2337 MSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYANNTSDRIIRPQRVGREAERM 2516
            MSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK +AINQKYAN+TSDRI+RP R G  AERM
Sbjct: 661  MSYSGYDIEDAIVMNKSSLDRGFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERM 720

Query: 2517 QILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLPDSAYKTAIQTYKGPQGETA 2696
            QILDDDGLA+PGEII+P+D+YINK+SP+ TR ++ S     DS Y++A QTYKGP GET 
Sbjct: 721  QILDDDGLAAPGEIIKPNDVYINKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETC 780

Query: 2697 VVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKGVCGIIVQQEDLPFSERGIS 2876
            VVDRVAL SDK+ +LC KF+IRHTRRPE+GDKFSSRHGQKGVCG IVQQED PFSERGI 
Sbjct: 781  VVDRVALCSDKNGDLCIKFLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGIC 840

Query: 2877 PDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFGEPSGHADRVEAISETLVKK 3056
            PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGSAFGEPSGHAD VE+ISETLVK 
Sbjct: 841  PDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKH 900

Query: 3057 GFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKMHARARGPRVMLTRQPTEGR 3236
            GFSY+GKD +YSG  G PLQAYIFMGPIYYQKLKHMVLDKMHAR  GPRVMLTRQPTEGR
Sbjct: 901  GFSYNGKDMIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGR 960

Query: 3237 SRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVCRVCGLLGYFNHKLKTGICS 3416
            +R+GGLR+GEMERDCLIAYGASM+IFERLM+SSDPFEVQVCRVCGLLGY+NHKLK GICS
Sbjct: 961  ARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICS 1020

Query: 3417 TCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            TCKNGDNIS+M+LPYACKLL QELQSMN+VPRLKL EA
Sbjct: 1021 TCKNGDNISSMKLPYACKLLIQELQSMNIVPRLKLAEA 1058


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
            gi|561026273|gb|ESW24958.1| hypothetical protein
            PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1770 bits (4585), Expect = 0.0
 Identities = 877/1140 (76%), Positives = 995/1140 (87%), Gaps = 3/1140 (0%)
 Frame = +3

Query: 120  EESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITS 299
            +   D++ L+AP+KS VDKFQLLPEFLKVRGLVKQHLDSFNYFV T IKKIV ANNLI++
Sbjct: 24   DSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVRTEIKKIVRANNLISA 83

Query: 300  DVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKN 479
               P +YL++ +V+I +P I  +  T  +TP  CRLSD TYAAPI V +EYT+GS D   
Sbjct: 84   TRHPHIYLRFLNVKIRKPCIMDESVTDDVTPQTCRLSDQTYAAPICVDVEYTHGSRDDPR 143

Query: 480  VMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQL 659
            +  + N+ IGRMPIMLRSC CVL  +D+ ELA+LGECPLDPGGYFVVKGTEKVILIQEQL
Sbjct: 144  LHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLDPGGYFVVKGTEKVILIQEQL 203

Query: 660  SKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMG 839
            SKNRIII++DKKG + ASVTSSTE  K+KT+IVM+ EK++L LN F   +P+M +MKAMG
Sbjct: 204  SKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLWLHLNQFPKKVPLMAVMKAMG 263

Query: 840  MESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKE 1019
            +ESDQEV QMVGRDPRY  LLLPS +EC   N+YTQEQALE+L+K VKR  +S+ S EKE
Sbjct: 264  IESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQALEYLDKMVKRSMYSSNSAEKE 323

Query: 1020 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 1199
             RA  +LRDVF+ANVPV   NFRPKCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLELS
Sbjct: 324  GRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLELS 383

Query: 1200 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAISTG 1373
            GQLISLLFEDLFK+M +E+K  TD  L KP ++   DI+  L R  +IIT GLER +STG
Sbjct: 384  GQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDISTLLNRTQNIITLGLERTLSTG 443

Query: 1374 NWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPR 1553
            N+++KRF+M RKGMTQVL RLSFI  +GHMT++SPQFEKSRKVSGPRALQPSQWGMLCP 
Sbjct: 444  NFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCPC 503

Query: 1554 DTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFN 1733
            DTPEGE+CGLVKNLALMTHVTTDE+E+PLIS+CYSLGVEDLELLS EELHT +SFLVI N
Sbjct: 504  DTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVEDLELLSAEELHTPDSFLVILN 563

Query: 1734 GLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKG 1913
            GLILGKH+RP  FA A+RKLRR GKIGEFVSVFV+EKQ CVY+ASDGGRVCRPLVIADKG
Sbjct: 564  GLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNCVYLASDGGRVCRPLVIADKG 623

Query: 1914 ISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPF 2093
            ISRIK+HHMKEL DGVRTF+DFLR+GLLEYLDVNE+NN LIALYEG+A  ETTHIEIEPF
Sbjct: 624  ISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTLIALYEGDATSETTHIEIEPF 683

Query: 2094 TILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTT 2273
            TILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLTT
Sbjct: 684  TILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLTT 743

Query: 2274 RTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKY 2453
            +TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK SA+ QK+
Sbjct: 744  KTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYSAVIQKH 803

Query: 2454 ANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSM- 2630
            +N+TSDRI+RP R    A RM+ILDDDG+A+PGEI++P DIYINKQSPI+TR   T +  
Sbjct: 804  SNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFDIYINKQSPIDTRTPRTGAAG 863

Query: 2631 SLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHG 2810
            +LPDSAY++  Q++KG  GE  VVDRV L SDKD N+C KF+IRHTRRPE+GDKFSSRHG
Sbjct: 864  NLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIKFLIRHTRRPELGDKFSSRHG 921

Query: 2811 QKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGS 2990
            QKGVCG IVQQED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYGS
Sbjct: 922  QKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 981

Query: 2991 AFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVL 3170
            AFGE SGHAD+VEAISETLV KGFSYSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMVL
Sbjct: 982  AFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVL 1041

Query: 3171 DKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEV 3350
            DKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFEV
Sbjct: 1042 DKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFEV 1101

Query: 3351 QVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            QVC  CGLLGY+NHKLKTGICS CKNGD ISTM+LPYACKL+ QELQSMN+VPRLKL +A
Sbjct: 1102 QVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACKLMIQELQSMNIVPRLKLADA 1161


>ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            RPC2 [Arabidopsis thaliana]
          Length = 1161

 Score = 1770 bits (4584), Expect = 0.0
 Identities = 875/1148 (76%), Positives = 1000/1148 (87%), Gaps = 14/1148 (1%)
 Frame = +3

Query: 129  IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDVD 308
            IDK+ LSAP+KS  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV AN+ ITS VD
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVD 76

Query: 309  PGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMT 488
            P +YL++K VR+GEPSI        + PHMCRL+D TYAAPI V+IEY +GSH  K    
Sbjct: 77   PSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSA 136

Query: 489  KNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 668
            K+N++IGRMPIMLRSCRCVL+ KDE+ELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 137  KDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 196

Query: 669  RIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMES 848
            RIII+SDKKG + ASVTSSTE TKSKTVI M+KEKIYL L+ F   IPI++++KAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMES 256

Query: 849  DQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRA 1028
            DQE+VQMVGRDPR+ A LLPSI+EC +  + TQ+QAL++LE KVK+ ++     EK+ RA
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPP-EKDGRA 315

Query: 1029 MKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQL 1208
            + ILRD+F+A+VPV   NFR KC YV VMLRRM+EA+LNKDAMDDKDYVGNKRLELSGQL
Sbjct: 316  LSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQL 375

Query: 1209 ISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDI---ITHGLERAISTGNW 1379
            ISLLFEDLFKTM SE  KN D  L KP R+SR D +  L +D    I+ GLER +STGN+
Sbjct: 376  ISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNF 435

Query: 1380 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDT 1559
            D+KRF+MHRKGMTQVL RLSFI ++G +TKISPQFEKSRKVSGPR+LQPSQWGMLCP DT
Sbjct: 436  DIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 495

Query: 1560 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 1739
            PEGE+CGLVKNLALMTHVTTDE+E PL+++CY LGV DLE+LS EELHT +SFLVI NGL
Sbjct: 496  PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGL 555

Query: 1740 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1919
            ILGKH RP++FA ++R+LRRAGKIGEFVSVF NEKQ CVY+ASD GRVCRPLVIADKGIS
Sbjct: 556  ILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGIS 615

Query: 1920 RIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGE-----------AEPE 2066
            R+K+HHMKELQDGVRTF+DF+R+GL+EYLDVNE+NNALIALYE +           A+ +
Sbjct: 616  RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKAD 675

Query: 2067 TTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLV 2246
            TTHIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+Y+LV
Sbjct: 676  TTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLV 735

Query: 2247 YPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK 2426
            YPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYDIEDAIVMNKSSLDRGFGRCIVMK
Sbjct: 736  YPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMK 795

Query: 2427 KLSAINQKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINT 2606
            K+ A++QKY N T+DRI+ PQR G +AE+MQILDDDGLA+PGEIIRP+DIYINKQ P++T
Sbjct: 796  KIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDT 855

Query: 2607 RDTVTSSMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIG 2786
                TS++S  DS Y+ A + +KGP+GET VVDRVAL SDK   LC K+IIRHTRRPE+G
Sbjct: 856  VTKFTSALS--DSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELG 913

Query: 2787 DKFSSRHGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVS 2966
            DKFSSRHGQKGVCGII+QQED PFSE GI PDLIMNPHGFPSRMT+GKMIELLG KAGVS
Sbjct: 914  DKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVS 973

Query: 2967 SGKFHYGSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYY 3146
             G+FHYGSAFGE SGHAD+VE IS TLV+KGFSYSGKD LYSG  G P++AYIFMGPIYY
Sbjct: 974  CGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYY 1033

Query: 3147 QKLKHMVLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLM 3326
            QKLKHMVLDKMHAR  GPRVM+TRQPTEG+S++GGLR+GEMERDCLIAYGASM+I+ERLM
Sbjct: 1034 QKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLM 1093

Query: 3327 ISSDPFEVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVV 3506
            ISSDPFEVQVCR CGLLGY+N+KLK  +C+TCKNGDNI+TM+LPYACKLLFQELQSMNVV
Sbjct: 1094 ISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVV 1153

Query: 3507 PRLKLTEA 3530
            PRLKLTEA
Sbjct: 1154 PRLKLTEA 1161


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1768 bits (4580), Expect = 0.0
 Identities = 881/1141 (77%), Positives = 992/1141 (86%), Gaps = 3/1141 (0%)
 Frame = +3

Query: 117  GEESIDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLIT 296
            G+   D++ L+AP+KS VDKFQL+PEFLKVRGLVKQHLDSFNYFV T IKKIV ANNLI 
Sbjct: 28   GDSGFDQRVLTAPIKSAVDKFQLIPEFLKVRGLVKQHLDSFNYFVRTDIKKIVRANNLIM 87

Query: 297  SDVDPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKK 476
            +   P +YL++ +V IG+PS+  D  T  LTP  CRLSD TYAAPI   +EYT  SHDK 
Sbjct: 88   ASRYPHIYLRFLNVGIGKPSMMIDEVTEGLTPQTCRLSDLTYAAPICADVEYTLRSHDKP 147

Query: 477  NVMTKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQ 656
            +      + IGRMPIMLRSC CVL+ KDE ELA+LGECPLDPGGYFV+KGTEKVILIQEQ
Sbjct: 148  DNKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLDPGGYFVIKGTEKVILIQEQ 207

Query: 657  LSKNRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAM 836
            LSKNRIII++DKKG + ASVTSSTE  K+KTVIVM+ EK++LQLN F   +P+MV+MKAM
Sbjct: 208  LSKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLWLQLNKFPKKVPLMVVMKAM 267

Query: 837  GMESDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEK 1016
            GMESDQEV+QMVGRDPRY  LLLPSI+EC    +YT+EQALE+L+K VKR T+S+ S EK
Sbjct: 268  GMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQALEYLDKLVKRPTYSSNSAEK 327

Query: 1017 EPRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLEL 1196
            E  A   LRDVF+ANVPV Q NF+ KCIYVAVM+RR+M+AILNKDAMDDKDYVGNKRLEL
Sbjct: 328  EGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAILNKDAMDDKDYVGNKRLEL 387

Query: 1197 SGQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMR--DIITHGLERAIST 1370
            SGQLISLLFEDLFK+M +E+K  TD  L KP ++   DI   L R   IIT GLER +ST
Sbjct: 388  SGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICTLLTRTRSIITLGLERTLST 447

Query: 1371 GNWDLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 1550
            GN+++KRF+M RKGMTQVL RLSFI  LGHMT++SPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 448  GNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKSRKVSGPRALQPSQWGMLCP 507

Query: 1551 RDTPEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIF 1730
             DTPEGE+CGLVKNLALMTHVTTDE+E PLISL YSL V  +E L  EELHT +SFLVIF
Sbjct: 508  CDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVARIEHLFAEELHTPDSFLVIF 567

Query: 1731 NGLILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADK 1910
            NGLILGKHRRP HFA  +RKLRRAG+IGEFVSV+VNEKQ CVY+ASDGGRVCRPLVIADK
Sbjct: 568  NGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHCVYLASDGGRVCRPLVIADK 627

Query: 1911 GISRIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEP 2090
            GISRIK+HHMKEL DGV TF+DFLR+GLLEYLDVNE+NNALIALYEG+A  ETTHIEIEP
Sbjct: 628  GISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNALIALYEGDATSETTHIEIEP 687

Query: 2091 FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLT 2270
            FTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL RMD+L+Y+LVYPQRPLLT
Sbjct: 688  FTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLRRMDSLLYLLVYPQRPLLT 747

Query: 2271 TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQK 2450
            T+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIVMKK +AI QK
Sbjct: 748  TKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYNAIIQK 807

Query: 2451 YANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVT-SS 2627
            ++N+TSDRI+RP R    A RMQILDDDG+A+PGEI+RP+DIYINKQSPI+TR   T S+
Sbjct: 808  HSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYDIYINKQSPIDTRTPKTGSA 867

Query: 2628 MSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRH 2807
             +LPDSAY++  Q++KG  GE  VVDRV L SDKDNN+C KF+IRHTRRPE+GDKFSSRH
Sbjct: 868  ANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIKFLIRHTRRPELGDKFSSRH 925

Query: 2808 GQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYG 2987
            GQKGVCG IV QED PFSE+GI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHYG
Sbjct: 926  GQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 985

Query: 2988 SAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMV 3167
            SAFGE SGHAD+VE ISETLV KGF+YSGKDF+YSG  G PLQAYIFMGPIYYQKLKHMV
Sbjct: 986  SAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1045

Query: 3168 LDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFE 3347
            LDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+I+ERLM+SSDPFE
Sbjct: 1046 LDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMLSSDPFE 1105

Query: 3348 VQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTE 3527
            VQVC  CGLLGY+NHKLKTGICS+CKNGDNISTM+LPYACKL+ QELQSMN+VPRLKL +
Sbjct: 1106 VQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLMIQELQSMNIVPRLKLAD 1165

Query: 3528 A 3530
            A
Sbjct: 1166 A 1166


>ref|XP_006362278.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            tuberosum]
          Length = 1151

 Score = 1766 bits (4573), Expect = 0.0
 Identities = 876/1137 (77%), Positives = 994/1137 (87%), Gaps = 3/1137 (0%)
 Frame = +3

Query: 129  IDKQFLSAPVKSPVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVAANNLITSDV- 305
            IDKQ+L++P+K+ VDK+QL+PEFLKVRGLVKQHL SFNY V T IKKIV AN+ I S   
Sbjct: 20   IDKQYLASPIKNSVDKYQLIPEFLKVRGLVKQHLASFNYLVKTDIKKIVRANHEIRSSTR 79

Query: 306  DPGMYLKYKDVRIGEPSITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVM 485
            DP +YL+Y+DVRIGEPS+T D     L+P  CRL+D TYAAPI V+++YT   + + +++
Sbjct: 80   DPNIYLRYRDVRIGEPSMTYDGVREKLSPQKCRLADLTYAAPIFVTVDYTMTRNGQISML 139

Query: 486  TKNNIVIGRMPIMLRSCRCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 665
            T+ ++VI RMPIMLRSC CVL  KDE++LA+LGECPLDPGGYF+V G EKVILIQEQLSK
Sbjct: 140  TQKDVVIARMPIMLRSCLCVLYEKDEEQLAKLGECPLDPGGYFIVNGREKVILIQEQLSK 199

Query: 666  NRIIIESDKKGRLVASVTSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGME 845
            NRIII++D+KG + ASV  STE TKSKT+I M+KEK+YL+LN F   +PIMV+MKAMGME
Sbjct: 200  NRIIIDTDRKGCVQASVICSTEKTKSKTIIKMEKEKVYLELNMFKTKVPIMVVMKAMGME 259

Query: 846  SDQEVVQMVGRDPRYGALLLPSIQECAAANIYTQEQALEFLE--KKVKRFTFSNASLEKE 1019
            SDQEVVQM+GRDPRY ALLLPSI+ECA   +YTQ QALEFLE  K +   ++ NA +EK 
Sbjct: 260  SDQEVVQMIGRDPRYSALLLPSIEECADLKLYTQHQALEFLESDKMLTMPSYYNAPVEKG 319

Query: 1020 PRAMKILRDVFVANVPVRQLNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELS 1199
             RA+ ILRD+F+A+VPV Q NFR KCIYVAVM+RR+MEAILNKDAMDDKDYVGNKRLELS
Sbjct: 320  ARALSILRDMFLAHVPVHQHNFRKKCIYVAVMMRRVMEAILNKDAMDDKDYVGNKRLELS 379

Query: 1200 GQLISLLFEDLFKTMNSEIKKNTDLALAKPSRSSRLDIAHYLMRDIITHGLERAISTGNW 1379
            GQL+SLLFEDLFKTMN E+++  D +    S+SS L + H    + IT  L+R +STGNW
Sbjct: 380  GQLLSLLFEDLFKTMNDEVRREFDAS----SKSSDL-LYHVKKSNRITVELQRTLSTGNW 434

Query: 1380 DLKRFKMHRKGMTQVLARLSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDT 1559
            D+KRF+MHRKGMT+VLARLS+I TLG+MTKI PQFEKSRKVSGPRALQPSQ+GM+CP DT
Sbjct: 435  DIKRFRMHRKGMTEVLARLSYIGTLGYMTKIKPQFEKSRKVSGPRALQPSQFGMICPCDT 494

Query: 1560 PEGEACGLVKNLALMTHVTTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGL 1739
            PEGEACGLVKNLALMTHVTTDED  P++SLCY LGVEDLE LS  ELHT NS+L+I NGL
Sbjct: 495  PEGEACGLVKNLALMTHVTTDEDARPIMSLCYDLGVEDLEQLSAAELHTPNSYLIILNGL 554

Query: 1740 ILGKHRRPKHFAYAMRKLRRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGIS 1919
            ILGKH+ P+ FA  MRKLRRAG+I EFVS+FVN+KQCCVYIASDGGRVCRPLVIA+KG+S
Sbjct: 555  ILGKHKSPQRFANGMRKLRRAGRIREFVSIFVNDKQCCVYIASDGGRVCRPLVIAEKGVS 614

Query: 1920 RIKEHHMKELQDGVRTFNDFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTI 2099
            RIKEHHM EL+DGVR FN FLR+GL+EYLDVNE+NN+LIALYE EA P+TTHIEIEPFTI
Sbjct: 615  RIKEHHMNELRDGVRDFNSFLRDGLIEYLDVNEENNSLIALYEKEATPDTTHIEIEPFTI 674

Query: 2100 LGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRT 2279
            LGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD L+Y+LVYPQRPLLTTRT
Sbjct: 675  LGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDGLLYLLVYPQRPLLTTRT 734

Query: 2280 IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAINQKYAN 2459
            IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKK +AI QKY N
Sbjct: 735  IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKYAAICQKYKN 794

Query: 2460 NTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTSSMSLP 2639
             TSDR+I+PQR G EAE+MQILDDDGLASPGEIIR  DIYINK+SP  T   VTS M LP
Sbjct: 795  LTSDRLIKPQRQGSEAEKMQILDDDGLASPGEIIRNRDIYINKESPTVTITQVTSPMGLP 854

Query: 2640 DSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSRHGQKG 2819
            DSAYK++ QTYKG +GE  V+DRVAL SD++NNL  KF+IR TRRPEIGDKFSSRHGQKG
Sbjct: 855  DSAYKSSRQTYKGTEGEPTVIDRVALHSDENNNLSIKFMIRQTRRPEIGDKFSSRHGQKG 914

Query: 2820 VCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHYGSAFG 2999
            VCGIIVQQEDLPFSERGI PDLIMNPHGFPSRMT+GKMIELLG KAGVS G+FHYGSAFG
Sbjct: 915  VCGIIVQQEDLPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFG 974

Query: 3000 EPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHMVLDKM 3179
            EPSGHAD V+AISETLVK GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 975  EPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPLQAYIFMGPIYYQKLKHMVLDKM 1034

Query: 3180 HARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPFEVQVC 3359
            HAR  GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAYGASM+I ERLM+SSDPFE QVC
Sbjct: 1035 HARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAYGASMLIHERLMLSSDPFEAQVC 1094

Query: 3360 RVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLTEA 3530
            R CGLLGY+N+KLK GICS CKNG+N+ST++LPYACKLLFQELQSMN+VPRLKLTEA
Sbjct: 1095 RKCGLLGYYNYKLKIGICSMCKNGENMSTLKLPYACKLLFQELQSMNIVPRLKLTEA 1151


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1764 bits (4569), Expect = 0.0
 Identities = 878/1082 (81%), Positives = 961/1082 (88%), Gaps = 24/1082 (2%)
 Frame = +3

Query: 357  ITADYDTRMLTPHMCRLSDTTYAAPIIVSIEYTNGSHDKKNVMTKNNIVIGRMPIMLRSC 536
            +T +  +  + PH CRLSD TYAAPI V+IEY  GSH +K  + KN++VIGRMPIMLRSC
Sbjct: 1    MTINAVSEKINPHTCRLSDMTYAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSC 60

Query: 537  RCVLNRKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIESDKKGRLVASV 716
             CVL  KDE ELARLGECPLDPGGYFV+KG EKVILIQEQLSKNRIII++DKKG + ASV
Sbjct: 61   CCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASV 120

Query: 717  TSSTEATKSKTVIVMDKEKIYLQLNTFTAMIPIMVIMKAMGMESDQEVVQMVGRDPRYGA 896
            TSS+EATKSKTVI M+KEKIYL LN F   IPIMV+MKAMGMESDQEVVQMVGRDP Y A
Sbjct: 121  TSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNA 180

Query: 897  LLLPSIQECAAANIYTQEQALEFLEKKVKRFTFSNASLEKEPRAMKILRDVFVANVPVRQ 1076
            +LLPSI+ECA   IYTQEQALE+LE KVKR  ++  + EKE RA+ ILRDVF+ANVPVR 
Sbjct: 181  VLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRS 240

Query: 1077 LNFRPKCIYVAVMLRRMMEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMNSEI 1256
             NFRPKC+YVAVMLRRM+EAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKT  SE+
Sbjct: 241  NNFRPKCLYVAVMLRRMVEAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEV 300

Query: 1257 KKNTDLALAKPSRSSRLDIAHYLM-RDIITHGLERAISTGNWDLKRFKMHRKGMTQVLAR 1433
            +K  DL L+KPSRSS LD + +L  R+ IT GLER +STGN+D+KRFKMHRKGMTQVLAR
Sbjct: 301  QKMIDLVLSKPSRSSALDPSQFLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLAR 360

Query: 1434 LSFIATLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCPRDTPEGEACGLVKNLALMTHV 1613
            LSFI TLG+MTK+SPQFEKSRKVSGPRALQPSQWGMLCP DTPEGEACGLVKNLALMTHV
Sbjct: 361  LSFIGTLGYMTKVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHV 420

Query: 1614 TTDEDEAPLISLCYSLGVEDLELLSGEELHTSNSFLVIFNGLILGKHRRPKHFAYAMRKL 1793
            TTDEDE PLISLCY LGVEDLELLSGEELHT NSFLVI NGLILGKHRRP+HFA AMRKL
Sbjct: 421  TTDEDEGPLISLCYCLGVEDLELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKL 480

Query: 1794 RRAGKIGEFVSVFVNEKQCCVYIASDGGRVCRPLVIADKGISRIKEHHMKELQDGVRTFN 1973
            RRAGK+GEFVSVFVNEKQ CVYIASDGGRVCRPLVIADKG+SRIKEHHMKEL DGVRTF+
Sbjct: 481  RRAGKVGEFVSVFVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFD 540

Query: 1974 DFLREGLLEYLDVNEQNNALIALYEGEAEPETTHIEIEPFTILGVCAGLIPFPHHNQSPR 2153
            DFLR+GL+EYLDVNE+NNALIALYEGEA PETTHIEIEPFTILGVCAGLIP+PHHNQSPR
Sbjct: 541  DFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPR 600

Query: 2154 NTYQCAMGKQAMGNIAYNQLYRMDTLIYMLVYPQRPLLTTRTIELV-------------- 2291
            NTYQCAMGKQAMGNIAYNQL RMDTL+Y+LVYPQRPLLTTRTIELV              
Sbjct: 601  NTYQCAMGKQAMGNIAYNQLCRMDTLLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFCP 660

Query: 2292 ---------GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKLSAIN 2444
                     GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMK+ SA+N
Sbjct: 661  VNCLLCFQVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVN 720

Query: 2445 QKYANNTSDRIIRPQRVGREAERMQILDDDGLASPGEIIRPHDIYINKQSPINTRDTVTS 2624
            QKY    SDRI+RPQR G  +ERMQILDDDG+A+PGEIIRP+DIYINK+S I+TR +  S
Sbjct: 721  QKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVS 780

Query: 2625 SMSLPDSAYKTAIQTYKGPQGETAVVDRVALFSDKDNNLCFKFIIRHTRRPEIGDKFSSR 2804
            S SLPDSAY+ A QTYKGP+GE+ VVDRVAL +D+++NL  KF+IRHTRRPE+GDKFSSR
Sbjct: 781  SESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSR 840

Query: 2805 HGQKGVCGIIVQQEDLPFSERGISPDLIMNPHGFPSRMTIGKMIELLGGKAGVSSGKFHY 2984
            HGQKGVCG I+QQED PFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVS G+FHY
Sbjct: 841  HGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHY 900

Query: 2985 GSAFGEPSGHADRVEAISETLVKKGFSYSGKDFLYSGHIGSPLQAYIFMGPIYYQKLKHM 3164
            GSAFGEPSGHADRVEAISETL+K GFSY+GKDF+YSG  G PLQAYIFMGPIYYQKLKHM
Sbjct: 901  GSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHM 960

Query: 3165 VLDKMHARARGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMMIFERLMISSDPF 3344
            VLDKMHAR  GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM+IFERLMISSDPF
Sbjct: 961  VLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPF 1020

Query: 3345 EVQVCRVCGLLGYFNHKLKTGICSTCKNGDNISTMQLPYACKLLFQELQSMNVVPRLKLT 3524
            EVQVCR CGLLGY++HKLKTGICS+CKNGDN+STM+LPYACKLL QELQSMN+VPRLKL+
Sbjct: 1021 EVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLS 1080

Query: 3525 EA 3530
            EA
Sbjct: 1081 EA 1082