BLASTX nr result

ID: Akebia23_contig00017237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00017237
         (235 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006402335.1| hypothetical protein EUTSA_v10006266mg [Eutr...    64   3e-08
ref|XP_007131373.1| hypothetical protein PHAVU_011G008300g [Phas...    63   5e-08
ref|XP_004247417.1| PREDICTED: probable small nuclear ribonucleo...    62   6e-08
ref|XP_006397960.1| hypothetical protein EUTSA_v10001688mg [Eutr...    62   1e-07
ref|XP_004299438.1| PREDICTED: probable small nuclear ribonucleo...    60   2e-07
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....    60   2e-07
gb|AAK68737.1| small nuclear ribonucleoprotein-like protein [Ara...    60   2e-07
ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis...    60   2e-07
ref|XP_006402336.1| hypothetical protein EUTSA_v10006266mg [Eutr...    60   4e-07
gb|EYU46662.1| hypothetical protein MIMGU_mgv1a016751mg [Mimulus...    59   5e-07
ref|XP_006448132.1| hypothetical protein CICLE_v10017261mg [Citr...    59   5e-07
ref|XP_006292085.1| hypothetical protein CARUB_v10018280mg [Caps...    59   5e-07
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...    59   5e-07
ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...    59   5e-07
gb|ACJ86019.1| unknown [Medicago truncatula]                           59   5e-07
ref|XP_002302713.1| small nuclear ribonucleoprotein D2 [Populus ...    59   5e-07
ref|XP_006588396.1| PREDICTED: uncharacterized protein LOC100500...    59   7e-07
ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleo...    59   7e-07
ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin...    59   7e-07
ref|XP_006444357.1| hypothetical protein CICLE_v10022968mg [Citr...    59   9e-07

>ref|XP_006402335.1| hypothetical protein EUTSA_v10006266mg [Eutrema salsugineum]
           gi|557103434|gb|ESQ43788.1| hypothetical protein
           EUTSA_v10006266mg [Eutrema salsugineum]
          Length = 177

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/66 (57%), Positives = 40/66 (60%)
 Frame = -1

Query: 199 TLTLESIQERSESLIQLL*FNMSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLI 20
           TL L  +     S   LL   MSRPMEED            TGPLSVLMMSVKNNTQVLI
Sbjct: 48  TLDLLQVPHCFSSSGVLLQVTMSRPMEEDTNNGKTEEEEFNTGPLSVLMMSVKNNTQVLI 107

Query: 19  NCRNNK 2
           NCRNN+
Sbjct: 108 NCRNNR 113


>ref|XP_007131373.1| hypothetical protein PHAVU_011G008300g [Phaseolus vulgaris]
           gi|561004373|gb|ESW03367.1| hypothetical protein
           PHAVU_011G008300g [Phaseolus vulgaris]
          Length = 109

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/45 (73%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDTAAAKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNK 45


>ref|XP_004247417.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Solanum lycopersicum] gi|565387163|ref|XP_006359373.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D2-like
           [Solanum tuberosum]
          Length = 109

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/45 (71%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSRPMEEDAPQGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>ref|XP_006397960.1| hypothetical protein EUTSA_v10001688mg [Eutrema salsugineum]
           gi|567166912|ref|XP_006397962.1| hypothetical protein
           EUTSA_v10001688mg [Eutrema salsugineum]
           gi|557099033|gb|ESQ39413.1| hypothetical protein
           EUTSA_v10001688mg [Eutrema salsugineum]
           gi|557099035|gb|ESQ39415.1| hypothetical protein
           EUTSA_v10001688mg [Eutrema salsugineum]
          Length = 109

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/45 (71%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>ref|XP_004299438.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Fragaria vesca subsp. vesca]
          Length = 107

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/45 (71%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEEDG            GPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSRPMEEDGAKNEEEEFNT--GPLSVLMMSVKNNTQVLINCRNNR 43


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/45 (68%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MS+PMEED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSKPMEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>gb|AAK68737.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
          Length = 135

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/45 (68%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MS+PMEED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>ref|NP_566107.1| small nuclear ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145331435|ref|NP_001078076.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|145339793|ref|NP_567134.3| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|565475278|ref|XP_006295280.1| hypothetical protein
           CARUB_v10024367mg [Capsella rubella]
           gi|20196966|gb|AAM14847.1| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|20197310|gb|AAC63620.2| putative small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255773|gb|AEC10867.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|330255776|gb|AEC10870.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|332646879|gb|AEE80400.1| small nuclear
           ribonucleoprotein D2 [Arabidopsis thaliana]
           gi|482563988|gb|EOA28178.1| hypothetical protein
           CARUB_v10024367mg [Capsella rubella]
          Length = 109

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/45 (68%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MS+PMEED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>ref|XP_006402336.1| hypothetical protein EUTSA_v10006266mg [Eutrema salsugineum]
           gi|557103435|gb|ESQ43789.1| hypothetical protein
           EUTSA_v10006266mg [Eutrema salsugineum]
          Length = 178

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/67 (56%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 TLTLESIQERSESLIQLL*FNMSRPMEED-GXXXXXXXXXXXTGPLSVLMMSVKNNTQVL 23
           TL L  +     S   LL   MSRPMEED             TGPLSVLMMSVKNNTQVL
Sbjct: 48  TLDLLQVPHCFSSSGVLLQVTMSRPMEEDTNNQGKTEEEEFNTGPLSVLMMSVKNNTQVL 107

Query: 22  INCRNNK 2
           INCRNN+
Sbjct: 108 INCRNNR 114


>gb|EYU46662.1| hypothetical protein MIMGU_mgv1a016751mg [Mimulus guttatus]
           gi|604348508|gb|EYU46663.1| hypothetical protein
           MIMGU_mgv1a016751mg [Mimulus guttatus]
          Length = 108

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDAPSKNEEEEFNT-GPLSVLMMSVKNNTQVLINCRNNK 44


>ref|XP_006448132.1| hypothetical protein CICLE_v10017261mg [Citrus clementina]
           gi|567911639|ref|XP_006448133.1| hypothetical protein
           CICLE_v10017261mg [Citrus clementina]
           gi|567911641|ref|XP_006448134.1| hypothetical protein
           CICLE_v10017261mg [Citrus clementina]
           gi|568829941|ref|XP_006469273.1| PREDICTED: probable
           small nuclear ribonucleoprotein Sm D2-like isoform X2
           [Citrus sinensis] gi|557550743|gb|ESR61372.1|
           hypothetical protein CICLE_v10017261mg [Citrus
           clementina] gi|557550744|gb|ESR61373.1| hypothetical
           protein CICLE_v10017261mg [Citrus clementina]
           gi|557550745|gb|ESR61374.1| hypothetical protein
           CICLE_v10017261mg [Citrus clementina]
          Length = 107

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDNVKNEEEEFNT--GPLSVLMMSVKNNTQVLINCRNNK 43


>ref|XP_006292085.1| hypothetical protein CARUB_v10018280mg [Capsella rubella]
           gi|482560792|gb|EOA24983.1| hypothetical protein
           CARUB_v10018280mg [Capsella rubella]
          Length = 109

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MS+PM+ED            TGPLSVLMMSVKNNTQVLINCRNN+
Sbjct: 1   MSKPMDEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNR 45


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|502138232|ref|XP_004503332.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D2-like isoform X1 [Cicer
           arietinum] gi|502138235|ref|XP_004503333.1| PREDICTED:
           small nuclear ribonucleoprotein Sm D2-like isoform X2
           [Cicer arietinum] gi|355525009|gb|AET05463.1| Small
           nuclear ribonucleoprotein-like protein [Medicago
           truncatula] gi|388506390|gb|AFK41261.1| unknown
           [Medicago truncatula]
          Length = 108

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDAVGKNEEEEFNT-GPLSVLMMSVKNNTQVLINCRNNK 44


>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDAAGKNEEEEFNT-GPLSVLMMSVKNNTQVLINCRNNK 44


>gb|ACJ86019.1| unknown [Medicago truncatula]
          Length = 108

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDAVGKNEEEEFNT-GPLSVLMMSVKNNTQVLINCRNNK 44


>ref|XP_002302713.1| small nuclear ribonucleoprotein D2 [Populus trichocarpa]
           gi|224128478|ref|XP_002320342.1| small nuclear
           ribonucleoprotein D2 [Populus trichocarpa]
           gi|118481477|gb|ABK92681.1| unknown [Populus
           trichocarpa] gi|222844439|gb|EEE81986.1| small nuclear
           ribonucleoprotein D2 [Populus trichocarpa]
           gi|222861115|gb|EEE98657.1| small nuclear
           ribonucleoprotein D2 [Populus trichocarpa]
          Length = 108

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/45 (71%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED             GPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEEDAPSKNEEEEFST-GPLSVLMMSVKNNTQVLINCRNNK 44


>ref|XP_006588396.1| PREDICTED: uncharacterized protein LOC100500203 isoform X1 [Glycine
           max]
          Length = 108

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/45 (73%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEED-TAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNK 44


>ref|XP_004146504.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Cucumis sativus] gi|449499984|ref|XP_004160970.1|
           PREDICTED: probable small nuclear ribonucleoprotein Sm
           D2-like [Cucumis sativus]
          Length = 107

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/45 (73%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEED--TSKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNK 43


>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
           gi|255629692|gb|ACU15195.1| unknown [Glycine max]
          Length = 117

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/45 (73%), Positives = 33/45 (73%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSRPMEED            TGPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRPMEED-TAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNK 44


>ref|XP_006444357.1| hypothetical protein CICLE_v10022968mg [Citrus clementina]
           gi|568852606|ref|XP_006479963.1| PREDICTED: probable
           small nuclear ribonucleoprotein Sm D2-like isoform X1
           [Citrus sinensis] gi|557546619|gb|ESR57597.1|
           hypothetical protein CICLE_v10022968mg [Citrus
           clementina]
          Length = 109

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/45 (68%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 MSRPMEEDGXXXXXXXXXXXTGPLSVLMMSVKNNTQVLINCRNNK 2
           MSR M+ED            TGPLSVLMMSVKNNTQVLINCRNNK
Sbjct: 1   MSRAMDEDTTGGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNK 45


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