BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00016769
         (2705 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   934   0.0  
gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis]             909   0.0  
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   908   0.0  
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   906   0.0  
ref|XP_007050635.1| RAD3-like DNA-binding helicase protein isofo...   902   0.0  
ref|XP_007198999.1| hypothetical protein PRUPE_ppa001835mg [Prun...   901   0.0  
ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fr...   896   0.0  
ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein ...   890   0.0  
ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   887   0.0  
ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like iso...   885   0.0  
ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   885   0.0  
ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutr...   873   0.0  
gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D...   865   0.0  
ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]...   865   0.0  
ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arab...   864   0.0  
ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Caps...   853   0.0  
ref|XP_001772009.1| predicted protein [Physcomitrella patens] gi...   833   0.0  
gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excisio...   818   0.0  
ref|XP_002989975.1| hypothetical protein SELMODRAFT_269587 [Sela...   809   0.0  
ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Br...   805   0.0  

>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  934 bits (2413), Expect(2) = 0.0
 Identities = 462/490 (94%), Positives = 479/490 (97%)
 Frame = +1

Query: 910  IGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAEHF 1089
            I RFKATDAGRLRAEYNRLVEGLAQRGNLP++D WL+NP LPDDILKEAVPGNIRRAEHF
Sbjct: 270  INRFKATDAGRLRAEYNRLVEGLAQRGNLPISDTWLANPALPDDILKEAVPGNIRRAEHF 329

Query: 1090 LSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLEIT 1269
            LSVLRRL+QYL GRL+TENVEKEGPVAFVASIN+Q GIDQKMLKFCYDRLHSLMLTLEIT
Sbjct: 330  LSVLRRLVQYLHGRLETENVEKEGPVAFVASINSQAGIDQKMLKFCYDRLHSLMLTLEIT 389

Query: 1270 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPVFD 1449
            DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL+IKPVF+
Sbjct: 390  DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFE 449

Query: 1450 RFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 1629
            RFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTR+CICPMVLTRGSDQLPVSTKFD
Sbjct: 450  RFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRNCICPMVLTRGSDQLPVSTKFD 509

Query: 1630 MRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFI 1809
            MRSDPGVVRNYGRLLLEMVS VPDG+VCFFVSYSYMDGIVN+WNE GIL++IMQHKLVFI
Sbjct: 510  MRSDPGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNTWNESGILKEIMQHKLVFI 569

Query: 1810 ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 1989
            ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL
Sbjct: 570  ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 629

Query: 1990 SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 2169
            SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK
Sbjct: 630  SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 689

Query: 2170 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLEKM 2349
            RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGV+ G+KTLLS+EDLEKM
Sbjct: 690  RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVS-GRKTLLSEEDLEKM 748

Query: 2350 GDGDAAEMLF 2379
            GDG   EMLF
Sbjct: 749  GDGTTNEMLF 758



 Score =  479 bits (1234), Expect(2) = 0.0
 Identities = 236/272 (86%), Positives = 250/272 (91%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQIE+VTV+FPYD+IYPEQYSYMVELKRALDAKGH LLEMPTGTGKTIALLSLITSYA
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKPSNP KLLYCTRTVHEMEKTLAELRLLH YQL+HLGP+ARILALGLSSRKNLC    
Sbjct: 61  LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVRALA+ENPN+PTC FFENYEKA+S+A+LPPGVYTLQDL
Sbjct: 121 VVSAENRDSVDAGCRKLTASWVRALAVENPNIPTCQFFENYEKAASEAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FG++KGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRE VVVFDEAHNID
Sbjct: 181 RAFGRDKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQTLEGATRNL+KMAQEI+R
Sbjct: 241 NVCIEALSVSVRRQTLEGATRNLSKMAQEINR 272


>gb|EXB39363.1| DNA repair helicase UVH6 [Morus notabilis]
          Length = 758

 Score =  909 bits (2349), Expect(2) = 0.0
 Identities = 449/494 (90%), Positives = 473/494 (95%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLV+GLAQRGNLP+++ WL+NP LPDDILKEAVPGNIRR
Sbjct: 266  MRQEIDRFKATDAGRLRAEYNRLVDGLAQRGNLPISNTWLANPALPDDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHFL VLRRL+QYL+GRL+TENVEKEGPV FVASIN   GIDQK LKFCYDRLHSLMLT
Sbjct: 326  AEHFLHVLRRLVQYLEGRLETENVEKEGPVNFVASINTHAGIDQKTLKFCYDRLHSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLH+QTICDFATLVGTY RGFSIIIEPFDERMPH+PDPVLQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLHVQTICDFATLVGTYARGFSIIIEPFDERMPHVPDPVLQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVF+RFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEMVS VPDG+VCFFVSYSYMDGIVNSWNE GIL++IMQHK
Sbjct: 506  TKFDMRSDLGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNSWNETGILKEIMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG   G+KTLLSQED
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG-GSGRKTLLSQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKMG+    EML+
Sbjct: 745  LEKMGERIVDEMLY 758



 Score =  460 bits (1183), Expect(2) = 0.0
 Identities = 226/272 (83%), Positives = 243/272 (89%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQIE+VTV+FPYDHIYPEQY+YM+ELKR+LDAKGH LLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYAYMLELKRSLDAKGHSLLEMPTGTGKTIALLSLITSYS 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KL+YCTRTVHEMEKTLAEL+LLHDYQLK LGP A ILALGLSSRKNLC    
Sbjct: 61  LSKPQSPLKLIYCTRTVHEMEKTLAELKLLHDYQLKQLGPGAGILALGLSSRKNLCVNPR 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRKLTASWVRALA E+P++PTC FFE+YEKA S A+LPPGVYTLQDL
Sbjct: 121 VVTAENRDSVDAACRKLTASWVRALAAEDPDIPTCEFFESYEKAGSAAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK+KGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAFGKQKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQTLEGA RNLN+M QEIDR
Sbjct: 241 NVCIEALSVSVRRQTLEGARRNLNRMRQEIDR 272


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
            gi|223540142|gb|EEF41719.1| DNA repair helicase
            rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  908 bits (2347), Expect(2) = 0.0
 Identities = 446/490 (91%), Positives = 471/490 (96%)
 Frame = +1

Query: 910  IGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAEHF 1089
            I RFKATDAGRLRAEYNRLVEGLAQRGNL +TD WLSNP LPDDILKEAVPGNIRRAEHF
Sbjct: 270  IERFKATDAGRLRAEYNRLVEGLAQRGNLAVTDTWLSNPALPDDILKEAVPGNIRRAEHF 329

Query: 1090 LSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLEIT 1269
            L VLRRL+QYLKGRLDTENVEKE PV+FVAS+N+Q GIDQK LKFCYDRLHSLMLTLEIT
Sbjct: 330  LHVLRRLVQYLKGRLDTENVEKESPVSFVASLNSQAGIDQKTLKFCYDRLHSLMLTLEIT 389

Query: 1270 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPVFD 1449
            DTDEFLH+QTICDFATLVGTY+RGFSIIIEPFDERMPHIPDPVLQLSCHDASL+IKPVFD
Sbjct: 390  DTDEFLHVQTICDFATLVGTYSRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFD 449

Query: 1450 RFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 1629
            RFQSVVITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD
Sbjct: 450  RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 509

Query: 1630 MRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFI 1809
            MRSDPGV RNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+NSWNE GIL++IMQHKLVFI
Sbjct: 510  MRSDPGVARNYGKLLVEMVSVVPDGIVCFFVSYSYMDGIINSWNETGILKEIMQHKLVFI 569

Query: 1810 ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 1989
            ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFG+PFQYTL
Sbjct: 570  ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGIPFQYTL 629

Query: 1990 SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 2169
            S+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK
Sbjct: 630  SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 689

Query: 2170 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLEKM 2349
            RSKLPGWILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G + G+KTLLSQEDLEKM
Sbjct: 690  RSKLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGAS-GRKTLLSQEDLEKM 748

Query: 2350 GDGDAAEMLF 2379
             +    +ML+
Sbjct: 749  AESGMQDMLY 758



 Score =  462 bits (1189), Expect(2) = 0.0
 Identities = 222/272 (81%), Positives = 248/272 (91%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQIE+VTV+FPYD+IYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KL+YCTRTVHEMEKTLAEL+LLH+YQ+KHLGP+ARILA+GLSSRKNLC    
Sbjct: 61  LSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAARILAIGLSSRKNLCVNPR 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASW+RA+A ENPN+PTC FFENYE+A+S A+LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWMRAMAAENPNIPTCEFFENYERAASAAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R +GKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RTYGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVR+QTLEGA+RNL+++ QEI+R
Sbjct: 241 NVCIEALSVSVRKQTLEGASRNLSRINQEIER 272


>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
            [Cucumis sativus]
          Length = 919

 Score =  906 bits (2342), Expect(2) = 0.0
 Identities = 448/494 (90%), Positives = 471/494 (95%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFK TDAGRLRAEYNRLVEGLAQRGNLP++D WLSNP LPDDILKEAVPGNIRR
Sbjct: 427  MRQEIERFKETDAGRLRAEYNRLVEGLAQRGNLPISDTWLSNPALPDDILKEAVPGNIRR 486

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRL+QYL+GRLDTENVEKEG V FV SI +Q GIDQK LKFCYDRLHSLMLT
Sbjct: 487  AEHFIHVLRRLVQYLEGRLDTENVEKEGLVTFVGSIGSQAGIDQKTLKFCYDRLHSLMLT 546

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLH+QTICDFATLVGTY RGFSIIIEP DERMPHIPDPVLQLSCHDASL+IK
Sbjct: 547  LEITDTDEFLHVQTICDFATLVGTYARGFSIIIEPVDERMPHIPDPVLQLSCHDASLAIK 606

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVF+RFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRGSDQLPVS
Sbjct: 607  PVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVS 666

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEMVS VPDG+VCFFVSYSYMDGI+NSWNE GIL++IMQHK
Sbjct: 667  TKFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIINSWNETGILKEIMQHK 726

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 727  LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 786

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 787  QYTLSKILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 846

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG + G+KTLLSQED
Sbjct: 847  RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG-SSGRKTLLSQED 905

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM + +  EML+
Sbjct: 906  LEKMSEANMNEMLY 919



 Score =  430 bits (1106), Expect(2) = 0.0
 Identities = 209/270 (77%), Positives = 231/270 (85%)
 Frame = +3

Query: 105 FQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYALS 284
           F+I  +T  F +D I+P++Y Y++++ +ALDAKGHCLLEMPTGTGKTIALLSLITSYALS
Sbjct: 164 FKIXNITKLFXFDIIFPQRYHYLIQINKALDAKGHCLLEMPTGTGKTIALLSLITSYALS 223

Query: 285 KPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXXXX 464
           KP NP KL+YCTRTVHEMEKTLAELRLLHDYQ++ LGP A+ILA+GLSSRKNLC      
Sbjct: 224 KPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPNVL 283

Query: 465 XXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDLRG 644
                    A CRKLTASWVRA+A ENP+VPTC FFE YEKA S A+LPPGVYTLQDLR 
Sbjct: 284 ASESRDSVDAGCRKLTASWVRAMAAENPDVPTCEFFEQYEKAGSSAVLPPGVYTLQDLRA 343

Query: 645 FGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNIDNV 824
           FG +KGWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQRE VVVFDEAHNIDNV
Sbjct: 344 FGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNIDNV 403

Query: 825 CIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           CIEALSVSVRRQT+EGA RNLNKM QEI+R
Sbjct: 404 CIEALSVSVRRQTIEGARRNLNKMRQEIER 433


>ref|XP_007050635.1| RAD3-like DNA-binding helicase protein isoform 1 [Theobroma cacao]
            gi|508702896|gb|EOX94792.1| RAD3-like DNA-binding
            helicase protein isoform 1 [Theobroma cacao]
          Length = 780

 Score =  902 bits (2330), Expect(2) = 0.0
 Identities = 443/489 (90%), Positives = 467/489 (95%)
 Frame = +1

Query: 913  GRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAEHFL 1092
            GRFKATDA RLR+EYNRLVEGLA RGNLP+TD WLSNP LPDDILKEAVPGNIRRAEHFL
Sbjct: 293  GRFKATDASRLRSEYNRLVEGLALRGNLPITDTWLSNPALPDDILKEAVPGNIRRAEHFL 352

Query: 1093 SVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLEITD 1272
             VLRRL+QYL+GRL+T+NVEKE PV FVASI++  GIDQK LKFCYDRLHSLMLTLEITD
Sbjct: 353  HVLRRLVQYLRGRLETDNVEKESPVGFVASISSHAGIDQKTLKFCYDRLHSLMLTLEITD 412

Query: 1273 TDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPVFDR 1452
            TDEFLHIQTICDFATL+GTY RGFSIIIEPFDERMPHIPDPVLQLSCHDASL+IKPVFDR
Sbjct: 413  TDEFLHIQTICDFATLIGTYARGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFDR 472

Query: 1453 FQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDM 1632
            FQSVVITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDM
Sbjct: 473  FQSVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDM 532

Query: 1633 RSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIE 1812
            RSDPGVVRNYG+LLLEMVS VPDG+VCFFVSYSYMDGI+N+WN+ GIL++IMQHKLVFIE
Sbjct: 533  RSDPGVVRNYGKLLLEMVSVVPDGIVCFFVSYSYMDGIINTWNDSGILKEIMQHKLVFIE 592

Query: 1813 TQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 1992
            TQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS
Sbjct: 593  TQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLS 652

Query: 1993 RILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 2172
            +ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR
Sbjct: 653  KILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKR 712

Query: 2173 SKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLEKMG 2352
            SKLP WILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G    +KTLLSQEDLEKMG
Sbjct: 713  SKLPSWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTG-GSDRKTLLSQEDLEKMG 771

Query: 2353 DGDAAEMLF 2379
            DG   EML+
Sbjct: 772  DGSVHEMLY 780



 Score =  474 bits (1221), Expect(2) = 0.0
 Identities = 230/273 (84%), Positives = 248/273 (90%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQIE+VTV+FPYDHIYPEQYSYM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KL+YCTRTVHEMEKTLAEL+LLH+YQ+KHLGP ARILA+GLSSRKNLC    
Sbjct: 61  LSKPQSPIKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPQARILAIGLSSRKNLCVNPT 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVRA+A ENPNVPTC FFENYEKA+S A+LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAMAAENPNVPTCQFFENYEKAASAAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDRK 917
           NVCIEALSVSVRRQTLEGATRNLN+++QEID +
Sbjct: 241 NVCIEALSVSVRRQTLEGATRNLNRISQEIDSR 273


>ref|XP_007198999.1| hypothetical protein PRUPE_ppa001835mg [Prunus persica]
            gi|462394399|gb|EMJ00198.1| hypothetical protein
            PRUPE_ppa001835mg [Prunus persica]
          Length = 759

 Score =  901 bits (2328), Expect(2) = 0.0
 Identities = 445/489 (91%), Positives = 465/489 (95%)
 Frame = +1

Query: 910  IGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAEHF 1089
            I RFKATDA RLR EYNRLVEGLAQ GNLPLTD WL NP LP+DILKEAVPGNIR+A+HF
Sbjct: 270  IERFKATDADRLRKEYNRLVEGLAQGGNLPLTDTWLQNPALPEDILKEAVPGNIRKADHF 329

Query: 1090 LSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLEIT 1269
            + VLRRL+QYL+GRL+TENVEKEGPV FVASI+   GIDQK LKFCYDRLHSLM+TLEIT
Sbjct: 330  VHVLRRLVQYLEGRLETENVEKEGPVGFVASISTHAGIDQKTLKFCYDRLHSLMMTLEIT 389

Query: 1270 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPVFD 1449
            DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASL+IKPVFD
Sbjct: 390  DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFD 449

Query: 1450 RFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 1629
            RFQSVVITSGTLSPIDLYPRLLNF+PV+SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD
Sbjct: 450  RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 509

Query: 1630 MRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFI 1809
            MRSD GVVRNYGRLLLEMVS VPDGVVCFFVSYSYMDGIVNSWNE GIL++IMQHKLVFI
Sbjct: 510  MRSDLGVVRNYGRLLLEMVSVVPDGVVCFFVSYSYMDGIVNSWNENGILKEIMQHKLVFI 569

Query: 1810 ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 1989
            ETQDVVETTLALDNYR+ACDCGRGAVF SVARGKVAEGIDFDRHYGRLVIMFG+PFQYTL
Sbjct: 570  ETQDVVETTLALDNYRKACDCGRGAVFLSVARGKVAEGIDFDRHYGRLVIMFGIPFQYTL 629

Query: 1990 SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 2169
            S+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK
Sbjct: 630  SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 689

Query: 2170 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLEKM 2349
            RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAG   G+KTLLSQEDLE M
Sbjct: 690  RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSVSGRKTLLSQEDLENM 749

Query: 2350 GDGDAAEML 2376
            G+  A EML
Sbjct: 750  GESIADEML 758



 Score =  459 bits (1180), Expect(2) = 0.0
 Identities = 221/272 (81%), Positives = 242/272 (88%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQ+E+VTV+FPYDHIYPEQY+YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFQVEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP NP KL+YCTRTVHEMEKTLAEL++LH+YQ+KHLGP A+ILA+GLSSRKNLC    
Sbjct: 61  LSKPQNPVKLIYCTRTVHEMEKTLAELKVLHNYQVKHLGPQAQILAVGLSSRKNLCVNPT 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRKLTASWVRALA ENPNVPTC F E YEKA S A+LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAACRKLTASWVRALAAENPNVPTCEFLEQYEKAGSGAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R +GK++GWCPYFLARHMVQF+NVVVYSYQY+LDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAYGKQRGWCPYFLARHMVQFSNVVVYSYQYMLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQTLEGA RNL+KM  EI+R
Sbjct: 241 NVCIEALSVSVRRQTLEGARRNLSKMQHEIER 272


>ref|XP_004290662.1| PREDICTED: DNA repair helicase UVH6-like [Fragaria vesca subsp.
            vesca]
          Length = 759

 Score =  896 bits (2316), Expect(2) = 0.0
 Identities = 442/494 (89%), Positives = 465/494 (94%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +++ I RFKATDAGRLR EYNRLVEGLAQ GNLP+TDAWL NP LPDDILKEAVPGNIR+
Sbjct: 266  MQQEIERFKATDAGRLRQEYNRLVEGLAQGGNLPMTDAWLQNPALPDDILKEAVPGNIRK 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            A+HFL VLRRL+QYL+ RL  ENVEKE P+ FV SIN Q GIDQK LKFCYDRLHSLM+T
Sbjct: 326  ADHFLHVLRRLVQYLEDRLGNENVEKELPLVFVKSINTQAGIDQKTLKFCYDRLHSLMMT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLHIQTICDFATLVGTY RGFSII EPFDERMPHIPDPVLQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLHIQTICDFATLVGTYARGFSIIFEPFDERMPHIPDPVLQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTR+CICPMVLTRGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRECICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEMVS VPDGVVCFFVSYSYMDGIVNSWNE GIL++IMQHK
Sbjct: 506  TKFDMRSDLGVVRNYGRLLLEMVSVVPDGVVCFFVSYSYMDGIVNSWNESGILKEIMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM+GVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMYGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+IL+ARLEYLRE FQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILVARLEYLRENFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G + G+KTLLSQ+D
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGSSSGRKTLLSQDD 745

Query: 2338 LEKMGDGDAAEMLF 2379
            LE+MG G   EMLF
Sbjct: 746  LERMGQGITDEMLF 759



 Score =  436 bits (1120), Expect(2) = 0.0
 Identities = 212/272 (77%), Positives = 233/272 (85%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQI+++TV+FPYDHIYPEQY+YM+ELKR LDA+GHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFQIDDITVYFPYDHIYPEQYAYMLELKRTLDARGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP NP KL+YCTRTVHEMEKTLAEL+LLH+YQL+HLG  A ILA+GLSSRKNLC    
Sbjct: 61  LSKPHNPVKLIYCTRTVHEMEKTLAELKLLHNYQLRHLGNHAAILAIGLSSRKNLCVNPT 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRKLTASWVRA A+ NPNVP+C FFE +E+     +LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAACRKLTASWVRAAAVANPNVPSCEFFEQFERDREGTVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK K WCPYFLAR MV+ ANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAFGKAKRWCPYFLARRMVEAANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQTLEGA RNL+KM QEI+R
Sbjct: 241 NVCIEALSVSVRRQTLEGARRNLSKMQQEIER 272


>ref|XP_002300852.1| ULTRAVIOLET HYPERSENSITIVE 6 family protein [Populus trichocarpa]
            gi|222842578|gb|EEE80125.1| ULTRAVIOLET HYPERSENSITIVE 6
            family protein [Populus trichocarpa]
          Length = 758

 Score =  890 bits (2299), Expect(2) = 0.0
 Identities = 440/490 (89%), Positives = 462/490 (94%)
 Frame = +1

Query: 910  IGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAEHF 1089
            I RFKATDA RLR EY RLV GLA  GNLP +D+WLSNP LPDDIL+EAVPGNIRRAEHF
Sbjct: 270  INRFKATDANRLRDEYKRLVNGLALSGNLPGSDSWLSNPALPDDILREAVPGNIRRAEHF 329

Query: 1090 LSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLEIT 1269
            L VLRRLLQYL  RLDTENVEKE P++FVASIN Q GIDQK LKFCYDRLHSLMLTLEIT
Sbjct: 330  LHVLRRLLQYLTVRLDTENVEKESPISFVASINNQAGIDQKTLKFCYDRLHSLMLTLEIT 389

Query: 1270 DTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPVFD 1449
            DTDEFLH+QTICDFATLVGTY+RGFSIIIEPFDERMPHIPDPVLQLSCHDASL+IKPVFD
Sbjct: 390  DTDEFLHVQTICDFATLVGTYSRGFSIIIEPFDERMPHIPDPVLQLSCHDASLAIKPVFD 449

Query: 1450 RFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTKFD 1629
            RFQSVVITSGTLSPIDLYPRLLNF+PV+SRSF MSLTRDCICPMVLTRGSDQLPVSTKFD
Sbjct: 450  RFQSVVITSGTLSPIDLYPRLLNFHPVVSRSFKMSLTRDCICPMVLTRGSDQLPVSTKFD 509

Query: 1630 MRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLVFI 1809
            MRSDPGVVRNYG+LL+EMVS VPDG+VCFFVSYSYMDGI+N+WNE G+L++IMQHKLVFI
Sbjct: 510  MRSDPGVVRNYGKLLVEMVSIVPDGIVCFFVSYSYMDGIINTWNESGLLKEIMQHKLVFI 569

Query: 1810 ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 1989
            ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL
Sbjct: 570  ETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQYTL 629

Query: 1990 SRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 2169
            S+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK
Sbjct: 630  SKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRHDK 689

Query: 2170 RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLEKM 2349
            RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G + GKKTLLSQEDLEKM
Sbjct: 690  RSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTG-SSGKKTLLSQEDLEKM 748

Query: 2350 GDGDAAEMLF 2379
             D     ML+
Sbjct: 749  DDSGKQAMLY 758



 Score =  455 bits (1171), Expect(2) = 0.0
 Identities = 221/272 (81%), Positives = 243/272 (89%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKFQIE+VTV+FPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           +SKP    KL+YCTRTVHEMEKTLAEL+LLH+YQ+KHLGP+A+ILA+GLSSRKNLC    
Sbjct: 61  ISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPN 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRALA ENPNV TC FFENYE+A+S A+LPPGVYTLQDL
Sbjct: 121 VLEANNRDSVDAACRKRTASWVRALAAENPNVETCEFFENYERAASGAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R +GKEKGWCPYFLARHMVQ ANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAYGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQTL+GA+RN++++ QEI+R
Sbjct: 241 NVCIEALSVSVRRQTLDGASRNISRIEQEINR 272


>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  887 bits (2293), Expect(2) = 0.0
 Identities = 439/494 (88%), Positives = 464/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I +FKATDAGRLRAEYNRLVEGLA RG+LP TDAWL+NP LPDDILKEAVPGNIRR
Sbjct: 266  MRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPATDAWLANPALPDDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRL+QYL+GRLDTENVEKE PV+FV SI    GIDQK LKFCYDRLHSLM+T
Sbjct: 326  AEHFIHVLRRLVQYLEGRLDTENVEKESPVSFVVSILNHAGIDQKALKFCYDRLHSLMMT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLHIQTICDFATLVGTY RGFSIIIEPFDERMPHIPDPVLQL CHDASL+IK
Sbjct: 386  LEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVF+RFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEM S VPDG+VCFFVSYSYMDGIVN+WNE GIL++IMQHK
Sbjct: 506  TKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLP WILSHL DAHLNLSTDMALHIAREFLRKMAQPYDK G T G+KTLLSQED
Sbjct: 686  RHDKRSKLPSWILSHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGT-GRKTLLSQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM      +M++
Sbjct: 745  LEKMAVSGLDDMMY 758



 Score =  462 bits (1189), Expect(2) = 0.0
 Identities = 225/272 (82%), Positives = 243/272 (89%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKF+IE++TV+FPYD+IYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFEIEDITVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KLLYCTRTVHEMEKTLAELRLLHDYQL+HLGP+A+ILALGLSSRKNLC    
Sbjct: 61  LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAAKILALGLSSRKNLCVNPR 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVRA+A ENP VPTC FFE YE+A S A+LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPGVPTCEFFEQYERAGSSAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R +GKEKGWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RVYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQT+EGA RNLN+M QEID+
Sbjct: 241 NVCIEALSVSVRRQTIEGARRNLNRMRQEIDK 272


>ref|XP_004516632.1| PREDICTED: DNA repair helicase UVH6-like isoform X1 [Cicer arietinum]
            gi|502180410|ref|XP_004516633.1| PREDICTED: DNA repair
            helicase UVH6-like isoform X2 [Cicer arietinum]
            gi|502180414|ref|XP_004516634.1| PREDICTED: DNA repair
            helicase UVH6-like isoform X3 [Cicer arietinum]
          Length = 759

 Score =  885 bits (2288), Expect(2) = 0.0
 Identities = 441/495 (89%), Positives = 467/495 (94%), Gaps = 1/495 (0%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I +FKATDAGRLRAEYNRLVEGLA RG+LP  D WL+NP LPDDILKEAVPGNIRR
Sbjct: 266  MRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPAADGWLANPALPDDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRL+QYL+GRL+TENVEKE PV+FV SI  Q GIDQK LKFCYDRLHSLM+T
Sbjct: 326  AEHFMQVLRRLVQYLEGRLETENVEKENPVSFVFSILNQVGIDQKTLKFCYDRLHSLMMT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLHIQTICDFATLVGTY RGFSIIIEPFDERMPHIPDPVLQL CHDASL+IK
Sbjct: 386  LEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVF+RFQ+VVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFERFQTVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEM S VPDG+VCFFVSYSYMDGIVNSWNE GIL+DIMQHK
Sbjct: 506  TKFDMRSDLGVVRNYGRLLLEMSSVVPDGIVCFFVSYSYMDGIVNSWNENGILKDIMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDK G T G+KTLLSQED
Sbjct: 686  RHDKRSKLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGGT-GRKTLLSQED 744

Query: 2338 LEK-MGDGDAAEMLF 2379
            LEK + DG   ++L+
Sbjct: 745  LEKIVFDGSMNDILY 759



 Score =  451 bits (1160), Expect(2) = 0.0
 Identities = 221/272 (81%), Positives = 238/272 (87%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKF IEEVTV+FPYD+IYPEQYSYMVELKR LDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFTIEEVTVYFPYDNIYPEQYSYMVELKRTLDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KL+YCTRTVHEMEKTLAELRLLHDY +K LGP+A++LALGLSSRKNLC    
Sbjct: 61  LSKPQSPLKLIYCTRTVHEMEKTLAELRLLHDYMVKCLGPAAKMLALGLSSRKNLCVNSC 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVRALA ENP VPTC FFE YE+A S A+LPPGVYTLQDL
Sbjct: 121 VLTAENRDSVDAGCRKLTASWVRALAAENPTVPTCEFFEQYERAGSAAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVA IISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAAIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQT++GA RN+++M QEID+
Sbjct: 241 NVCIEALSVSVRRQTIDGARRNISRMRQEIDK 272


>ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  885 bits (2287), Expect(2) = 0.0
 Identities = 436/494 (88%), Positives = 464/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I +FKATDAGRLRAEYNRLVEGLA RG+LP TDAWL+NP LPDDILKEAVPGNIRR
Sbjct: 266  MRQEIDKFKATDAGRLRAEYNRLVEGLALRGDLPATDAWLANPALPDDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRL+QYL+GRLDTENVEKE PV+FV SI    GIDQK LKFCYDRLHSLM+T
Sbjct: 326  AEHFIHVLRRLVQYLEGRLDTENVEKESPVSFVVSILNHAGIDQKSLKFCYDRLHSLMMT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFLHIQTICDFATLVGTY RGFSIIIEPFDERMPHIPDPVLQL CHDASL+IK
Sbjct: 386  LEITDTDEFLHIQTICDFATLVGTYARGFSIIIEPFDERMPHIPDPVLQLCCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVF+RFQSVVITSGTLSPIDLYPRLLNFNPV+SRSFTMSLTRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRSFTMSLTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSD GVVRNYGRLLLEM S VPDG+VCFFVSYSYMDGIVN+WNE GIL++IMQHK
Sbjct: 506  TKFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYR+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLP WILSHL DAHLNLSTDMALH+AR+FLRKMAQPYDK G T G+KTLLSQED
Sbjct: 686  RHDKRSKLPSWILSHLHDAHLNLSTDMALHVARDFLRKMAQPYDKTGGT-GRKTLLSQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM      ++++
Sbjct: 745  LEKMAVSGMGDVMY 758



 Score =  454 bits (1169), Expect(2) = 0.0
 Identities = 221/272 (81%), Positives = 241/272 (88%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MK +IE++TV+FPYD IYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKLEIEDITVYFPYDKIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LSKP +P KLLYCTRTVHEMEKTLAELRLLH YQL+HLGP+A+ILALGLSSRKNLC    
Sbjct: 61  LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHHYQLRHLGPAAKILALGLSSRKNLCVNPR 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVRA+A ENP+VP+C FFE YE+A S A+LPPGVYTLQDL
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPSVPSCEFFEQYERAGSSAVLPPGVYTLQDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R +GKEKGWCPY+LARHMVQFANVVVYSYQYLLDPKVAGIISKEMQ+E VVVFDEAHNID
Sbjct: 181 RAYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRRQT+EGA RNL++M QEID+
Sbjct: 241 NVCIEALSVSVRRQTIEGARRNLSRMRQEIDK 272


>ref|XP_006418256.1| hypothetical protein EUTSA_v10006888mg [Eutrema salsugineum]
            gi|557096027|gb|ESQ36609.1| hypothetical protein
            EUTSA_v10006888mg [Eutrema salsugineum]
          Length = 758

 Score =  873 bits (2256), Expect(2) = 0.0
 Identities = 430/494 (87%), Positives = 464/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLVEGLA RG+L  TD WL+NP LP DILKEAVPGNIRR
Sbjct: 266  IRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGTDQWLANPALPHDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRLLQYL GRLDT+NVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLT
Sbjct: 326  AEHFVHVLRRLLQYLGGRLDTDNVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTD+FL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IK
Sbjct: 386  LEITDTDDFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLL+FNPV+SRSF MS+TRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLSFNPVVSRSFKMSMTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSDPGVVRNYG+ L+EMVS VPDGVVCFFVSYSYMDGI+ +WNE GIL++IMQ K
Sbjct: 506  TKFDMRSDPGVVRNYGKFLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+MFGVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG T G+KTLL+QED
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAG-TMGRKTLLTQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM +    +M +
Sbjct: 745  LEKMAETGVQDMAY 758



 Score =  438 bits (1126), Expect(2) = 0.0
 Identities = 212/272 (77%), Positives = 238/272 (87%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPY++IYPEQY YMVELKR+LDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYENIYPEQYEYMVELKRSLDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTLAEL+LLH+YQ++HLG  A+ILA+GLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLAELKLLHEYQVRHLGSQAKILAIGLSSRKNLCVNPK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPNV  C +FENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSAENPNVELCDYFENYEKAAENALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK +GWCPYFLARHMVQFANV+VYSYQYLLDPKVAGIISKE+Q+E VVVFDEAHNID
Sbjct: 181 RTFGKNRGWCPYFLARHMVQFANVIVYSYQYLLDPKVAGIISKELQKETVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRR TLEGA RNLNK+ QEIDR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDR 272


>gb|AAF14582.1|AF188623_1 nucleotide excision repair protein XP-D homolog [Arabidopsis
            thaliana]
          Length = 758

 Score =  865 bits (2236), Expect(2) = 0.0
 Identities = 428/494 (86%), Positives = 460/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLVEGLA RG+L   D WL+NP LP DILKEAVPGNIRR
Sbjct: 266  IRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGGDQWLANPALPHDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRLLQYL  RLDTENVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLT
Sbjct: 326  AEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLLNF PV+SRSF MS+TRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSDPGVVRNYG+LL+EMVS VPDGVVCFFVSYSYMDGI+ +WNE GIL++IMQ K
Sbjct: 506  TKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILEEIMQQK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+M+GVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+IL ARLEYL +TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG T G+KTLL+QED
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAG-TMGRKTLLTQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM +    +M +
Sbjct: 745  LEKMAETGVQDMAY 758



 Score =  441 bits (1135), Expect(2) = 0.0
 Identities = 214/272 (78%), Positives = 236/272 (86%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPYD+IYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTL EL+LLHDYQ++HLG  A+ILALGLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPNV  C FFENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+Q+E VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRR TLEGA RNLNK+ QEIDR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDR 272


>ref|NP_171818.1| DNA repair helicase UVH6 [Arabidopsis thaliana]
            gi|30678494|ref|NP_849584.1| DNA repair helicase UVH6
            [Arabidopsis thaliana]
            gi|57013122|sp|Q8W4M7.1|ERCC2_ARATH RecName: Full=DNA
            repair helicase UVH6; AltName: Full=ERCC2 homolog;
            AltName: Full=RAD3 homolog; Short=AtUVH6; Short=AtXPD;
            AltName: Full=UV hypersensitive protein 6; AltName:
            Full=XPD homolog gi|17064790|gb|AAL32549.1| Strong
            similarity to nucleotide excision repair protein
            [Arabidopsis thaliana] gi|20258776|gb|AAM13910.1|
            putative DNA repair protein [Arabidopsis thaliana]
            gi|22651570|gb|AAM10793.1| DNA repair/transcription
            factor protein [Arabidopsis thaliana]
            gi|34098809|gb|AAQ56787.1| At1g03190 [Arabidopsis
            thaliana] gi|332189421|gb|AEE27542.1| DNA repair helicase
            UVH6 [Arabidopsis thaliana] gi|332189422|gb|AEE27543.1|
            DNA repair helicase UVH6 [Arabidopsis thaliana]
          Length = 758

 Score =  865 bits (2235), Expect(2) = 0.0
 Identities = 428/494 (86%), Positives = 460/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLVEGLA RG+L   D WL+NP LP DILKEAVPGNIRR
Sbjct: 266  IRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGGDQWLANPALPHDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRLLQYL  RLDTENVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLT
Sbjct: 326  AEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLLNF PV+SRSF MS+TRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSDPGVVRNYG+LL+EMVS VPDGVVCFFVSYSYMDGI+ +WNE GIL++IMQ K
Sbjct: 506  TKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+M+GVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+IL ARLEYL +TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG T G+KTLL+QED
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAG-TMGRKTLLTQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM +    +M +
Sbjct: 745  LEKMAETGVQDMAY 758



 Score =  441 bits (1135), Expect(2) = 0.0
 Identities = 214/272 (78%), Positives = 236/272 (86%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPYD+IYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTL EL+LLHDYQ++HLG  A+ILALGLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPNV  C FFENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+Q+E VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRR TLEGA RNLNK+ QEIDR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDR 272


>ref|XP_002889444.1| hypothetical protein ARALYDRAFT_470299 [Arabidopsis lyrata subsp.
            lyrata] gi|297335286|gb|EFH65703.1| hypothetical protein
            ARALYDRAFT_470299 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  864 bits (2233), Expect(2) = 0.0
 Identities = 427/494 (86%), Positives = 461/494 (93%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLVEGLA RG+L  +D WL+NP LP DILKEAVPGNIRR
Sbjct: 266  IRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGSDQWLANPALPHDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRLLQYL  RLDTENVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLT
Sbjct: 326  AEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLL+F PV+SRSF MS+TRDCICPMVLTRGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLSFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            TKFDMRSDPGVVRNYG+LL+EMVS VPDGVVCFFVSYSYMDGI+ +WNE GIL++IMQ K
Sbjct: 506  TKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+M+GVPF
Sbjct: 566  LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+IL ARLEYL +TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS
Sbjct: 626  QYTLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
            RHDKRSKLPGWILSHLRDAHLNLSTDMA+HIAREFLRKMAQPYDKAG T G+KTLL+QED
Sbjct: 686  RHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQPYDKAG-TMGRKTLLTQED 744

Query: 2338 LEKMGDGDAAEMLF 2379
            LEKM +    +M +
Sbjct: 745  LEKMAETGVQDMAY 758



 Score =  440 bits (1132), Expect(2) = 0.0
 Identities = 214/272 (78%), Positives = 236/272 (86%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPYD+IYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTL EL+LLHDYQ++HLG  A ILA+GLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGAQAMILAIGLSSRKNLCVNTK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPNV  C +FENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDYFENYEKAADNALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK +GWCPYFLARHMVQFANV+VYSYQYLLDPKVAGIISKE+Q+E VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMVQFANVIVYSYQYLLDPKVAGIISKELQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRR TLEGA RNLNK+ QEIDR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDR 272


>ref|XP_006306808.1| hypothetical protein CARUB_v10008351mg [Capsella rubella]
            gi|482575519|gb|EOA39706.1| hypothetical protein
            CARUB_v10008351mg [Capsella rubella]
          Length = 786

 Score =  853 bits (2205), Expect(2) = 0.0
 Identities = 429/522 (82%), Positives = 463/522 (88%), Gaps = 28/522 (5%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            +R+ I RFKATDAGRLRAEYNRLVEGLA RG+L  +D WL+NP LP DILKEAVPGNIRR
Sbjct: 266  IRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGSDQWLANPALPHDILKEAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF+ VLRRLLQYL  RLDTENVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLT
Sbjct: 326  AEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LEITDTDEFL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IK
Sbjct: 386  LEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRG------- 1596
            PVFDRFQSVVITSGTLSPIDLYPRLL+F PV+SRSF MS+TRDCICPMVLTRG       
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLSFTPVVSRSFKMSMTRDCICPMVLTRGRYVYKTN 505

Query: 1597 ---------------------SDQLPVSTKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVC 1713
                                 SDQLPVSTKFDMRSDPGVVRNYG+LL+EMVS VPDGVVC
Sbjct: 506  PDHLPYCLVLYGFTLWVVFFFSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVC 565

Query: 1714 FFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETQDVVETTLALDNYRRACDCGRGAVFF 1893
            FFVSYSYMDGI+ +WNE GIL++IMQ KLVFIETQDVVETTLALDNYRRACDCGRGAVFF
Sbjct: 566  FFVSYSYMDGIIATWNETGILKEIMQQKLVFIETQDVVETTLALDNYRRACDCGRGAVFF 625

Query: 1894 SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDAL 2073
            SVARGKVAEGIDFDRHYGRLV+M+GVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDAL
Sbjct: 626  SVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDAL 685

Query: 2074 RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIA 2253
            RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMA+HIA
Sbjct: 686  RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIA 745

Query: 2254 REFLRKMAQPYDKAGVTGGKKTLLSQEDLEKMGDGDAAEMLF 2379
            REFLRKMAQPYDKAG T G+KTLL+QEDLEKM +    +M +
Sbjct: 746  REFLRKMAQPYDKAG-TMGRKTLLTQEDLEKMAETGVQDMAY 786



 Score =  439 bits (1129), Expect(2) = 0.0
 Identities = 212/272 (77%), Positives = 237/272 (87%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPYD+IYPEQY YM+ELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTLAEL++LHDYQ++HLG  A+ILA+GLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLAELKVLHDYQVRHLGTQAKILAIGLSSRKNLCVNTK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPN+  C +FENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNIELCDYFENYEKAAENALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK  GWCPYFLARHMVQFANV+VYSYQYLLDPKVAGIISKE+Q+E VVVFDEAHNID
Sbjct: 181 RAFGKNCGWCPYFLARHMVQFANVIVYSYQYLLDPKVAGIISKELQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSVSVRR TLEGA RNLNK+ QEIDR
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEIDR 272


>ref|XP_001772009.1| predicted protein [Physcomitrella patens] gi|162676610|gb|EDQ63090.1|
            predicted protein [Physcomitrella patens]
          Length = 750

 Score =  833 bits (2151), Expect(2) = 0.0
 Identities = 407/482 (84%), Positives = 449/482 (93%)
 Frame = +1

Query: 904  RLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAE 1083
            +LI + KATDA RLR EY+RLVEGLAQRGNL  TD WL+NP LP DIL+EAVPGNIRRAE
Sbjct: 267  QLIEKSKATDANRLRQEYSRLVEGLAQRGNLAGTDTWLANPALPQDILQEAVPGNIRRAE 326

Query: 1084 HFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLE 1263
            HF++ L+RL+QY+K R+ TE VE E PV+FV ++  Q GIDQK LKFCYDRLHSL+LTLE
Sbjct: 327  HFVAFLKRLVQYIKNRMITEKVESESPVSFVTALQNQAGIDQKSLKFCYDRLHSLLLTLE 386

Query: 1264 ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPV 1443
            +T+TDEF++IQT+CDFATLVGTYTRGF+IIIEP+DERMP+IPDPVLQLSC D+SL+IKPV
Sbjct: 387  VTNTDEFMYIQTVCDFATLVGTYTRGFTIIIEPYDERMPNIPDPVLQLSCLDSSLAIKPV 446

Query: 1444 FDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTK 1623
            F++FQSVVITSGTLSPIDLYPRLLNF+PVIS S+ M+LTRDC+CPMVLTRGSDQLPVSTK
Sbjct: 447  FEKFQSVVITSGTLSPIDLYPRLLNFHPVISNSYKMTLTRDCLCPMVLTRGSDQLPVSTK 506

Query: 1624 FDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLV 1803
            FDMRSDPGVVRNYGRLLLEMV+ VPDG+VCFFVSYSYMDGIVNSWNEMGILQ++MQHKLV
Sbjct: 507  FDMRSDPGVVRNYGRLLLEMVTAVPDGIVCFFVSYSYMDGIVNSWNEMGILQEVMQHKLV 566

Query: 1804 FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQY 1983
            FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIM+GVPFQY
Sbjct: 567  FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMYGVPFQY 626

Query: 1984 TLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 2163
            TLSRIL ARLEYLRETFQIKE DFLTFDA+RQAAQCVGRVIRSKADYGMMIFADKRY+RH
Sbjct: 627  TLSRILRARLEYLRETFQIKENDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADKRYNRH 686

Query: 2164 DKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQEDLE 2343
            DKRSKLPGWILSHLR+AHLNLSTDM++HIAREFLR+MAQPYDK G  G   TLLSQ DLE
Sbjct: 687  DKRSKLPGWILSHLREAHLNLSTDMSVHIAREFLRRMAQPYDKTG-KGLNATLLSQADLE 745

Query: 2344 KM 2349
            KM
Sbjct: 746  KM 747



 Score =  400 bits (1029), Expect(2) = 0.0
 Identities = 194/272 (71%), Positives = 227/272 (83%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKF+IE +TV+FPY+ IYPEQY YMV+LKR LDA+GHCLLEMPTGTGKTI LLSLITSY 
Sbjct: 1   MKFKIEGLTVYFPYEFIYPEQYDYMVDLKRTLDARGHCLLEMPTGTGKTITLLSLITSYM 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           L+ PS   KL+YCTRTVHEMEK L ELR L  YQ K LG +A++LALGLSSRKNLC    
Sbjct: 61  LANPS-VGKLIYCTRTVHEMEKVLEELRKLQAYQEKALGKAAKMLALGLSSRKNLCIHPQ 119

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      A CRKLTASWVR+LA++NPN+  C ++E YEK  +DA+LP GVYTL DL
Sbjct: 120 VSGEGSRESVDAGCRKLTASWVRSLALDNPNIELCPYYEGYEKGGADALLPSGVYTLHDL 179

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           RGFG+EK WCPYFLARHM+QFANVVVY+YQYLLDPKVAGIISKEM++ECVVVFDEAHNID
Sbjct: 180 RGFGREKRWCPYFLARHMIQFANVVVYNYQYLLDPKVAGIISKEMEKECVVVFDEAHNID 239

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           NVCIEALSV++R+QTL+GATRNL+++ Q I++
Sbjct: 240 NVCIEALSVNIRQQTLDGATRNLSQVTQLIEK 271


>gb|AAC72116.1| Strong similarity to gb|U04968 nucleotide excision repair protein
            (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana]
          Length = 735

 Score =  818 bits (2113), Expect(2) = 0.0
 Identities = 401/452 (88%), Positives = 428/452 (94%)
 Frame = +1

Query: 904  RLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRRAE 1083
            +L+GRFKATDAGRLRAEYNRLVEGLA RG+L   D WL+NP LP DILKEAVPGNIRRAE
Sbjct: 281  QLVGRFKATDAGRLRAEYNRLVEGLALRGDLSGGDQWLANPALPHDILKEAVPGNIRRAE 340

Query: 1084 HFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLTLE 1263
            HF+ VLRRLLQYL  RLDTENVEKE PV+FV+S+N+Q GI+QK LKFCYDRL SLMLTLE
Sbjct: 341  HFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAGIEQKTLKFCYDRLQSLMLTLE 400

Query: 1264 ITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIKPV 1443
            ITDTDEFL IQT+CDFATLVGTY RGFSIIIEP+DERMPHIPDP+LQLSCHDASL+IKPV
Sbjct: 401  ITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIKPV 460

Query: 1444 FDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVSTK 1623
            FDRFQSVVITSGTLSPIDLYPRLLNF PV+SRSF MS+TRDCICPMVLTRGSDQLPVSTK
Sbjct: 461  FDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMVLTRGSDQLPVSTK 520

Query: 1624 FDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHKLV 1803
            FDMRSDPGVVRNYG+LL+EMVS VPDGVVCFFVSYSYMDGI+ +WNE GIL++IMQ KLV
Sbjct: 521  FDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDGIIATWNETGILKEIMQQKLV 580

Query: 1804 FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQY 1983
            FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLV+M+GVPFQY
Sbjct: 581  FIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQY 640

Query: 1984 TLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 2163
            TLS+IL ARLEYL +TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH
Sbjct: 641  TLSKILRARLEYLHDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSRH 700

Query: 2164 DKRSKLPGWILSHLRDAHLNLSTDMALHIARE 2259
            DKRSKLPGWILSHLRDAHLNLSTDMA+HIARE
Sbjct: 701  DKRSKLPGWILSHLRDAHLNLSTDMAIHIARE 732



 Score =  439 bits (1130), Expect(2) = 0.0
 Identities = 213/271 (78%), Positives = 235/271 (86%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F+IE+VTV+FPYD+IYPEQY YMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPSARILALGLSSRKNLCXXXX 458
           LS+P +P KL+YCTRTVHEMEKTL EL+LLHDYQ++HLG  A+ILALGLSSRKNLC    
Sbjct: 61  LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120

Query: 459 XXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQDL 638
                      AACRK TASWVRAL+ ENPNV  C FFENYEKA+ +A+LPPGVYTL+DL
Sbjct: 121 VLAAENRDSVDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDL 180

Query: 639 RGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID 818
           R FGK +GWCPYFLARHM+QFANV+VYSYQYLLDPKVAG ISKE+Q+E VVVFDEAHNID
Sbjct: 181 RAFGKNRGWCPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNID 240

Query: 819 NVCIEALSVSVRRQTLEGATRNLNKMAQEID 911
           NVCIEALSVSVRR TLEGA RNLNK+ QEID
Sbjct: 241 NVCIEALSVSVRRVTLEGANRNLNKIRQEID 271


>ref|XP_002989975.1| hypothetical protein SELMODRAFT_269587 [Selaginella moellendorffii]
            gi|300142286|gb|EFJ08988.1| hypothetical protein
            SELMODRAFT_269587 [Selaginella moellendorffii]
          Length = 752

 Score =  809 bits (2090), Expect(2) = 0.0
 Identities = 396/484 (81%), Positives = 442/484 (91%)
 Frame = +1

Query: 898  LRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNIRR 1077
            L ++I RFK TDA RLR EYNRLVEGLAQ+GNL  +D WL+NPVLP+DIL+EAVPGNIRR
Sbjct: 266  LNQIISRFKETDANRLRQEYNRLVEGLAQQGNLHGSDNWLANPVLPEDILREAVPGNIRR 325

Query: 1078 AEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLMLT 1257
            AEHF++ L+R +QYL+ RLDT+ V KEGPV+F  +++   G+DQK LKFCYDRLHSL+LT
Sbjct: 326  AEHFVAFLQRAVQYLRERLDTDTVVKEGPVSFTTTMSTAAGLDQKALKFCYDRLHSLLLT 385

Query: 1258 LEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLSIK 1437
            LE+T+ DEFLH+QT+C+F TLVGTYTRGFSIIIEP+DERMPHIPDPVLQLSC DASL+IK
Sbjct: 386  LEVTEIDEFLHVQTVCNFLTLVGTYTRGFSIIIEPYDERMPHIPDPVLQLSCLDASLAIK 445

Query: 1438 PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLPVS 1617
            PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVI  SFTM+LTRDC+CPM+L RGSDQLPVS
Sbjct: 446  PVFDRFQSVVITSGTLSPIDLYPRLLNFNPVIIHSFTMTLTRDCLCPMILARGSDQLPVS 505

Query: 1618 TKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQHK 1797
            +KFDMRSDPGVVRNYGRLLLEMV+TVPDGVVCFFVSYSYMDGI+NSWNEMGILQ++MQHK
Sbjct: 506  SKFDMRSDPGVVRNYGRLLLEMVATVPDGVVCFFVSYSYMDGIINSWNEMGILQEVMQHK 565

Query: 1798 LVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 1977
            LVFIETQD VETTLAL+N+R+ACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF
Sbjct: 566  LVFIETQDYVETTLALENFRQACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPF 625

Query: 1978 QYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYS 2157
            QYTLS+IL ARLEYLR+TFQIKEGDFLTFDA+RQAAQCVGRVIRSKADYGMMIFADKRY+
Sbjct: 626  QYTLSKILNARLEYLRDTFQIKEGDFLTFDAVRQAAQCVGRVIRSKADYGMMIFADKRYN 685

Query: 2158 RHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQED 2337
              +KR+KLP WI S LR+ HLNLSTDMA+HIAREFLR+MAQP D       K TLLSQED
Sbjct: 686  LPNKRNKLPQWIQSQLREEHLNLSTDMAVHIAREFLRRMAQPSDP---QVSKSTLLSQED 742

Query: 2338 LEKM 2349
            LEKM
Sbjct: 743  LEKM 746



 Score =  381 bits (978), Expect(2) = 0.0
 Identities = 190/273 (69%), Positives = 221/273 (80%), Gaps = 1/273 (0%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           MKF IE +TV+FPY+ IY EQY+YMVELK ALDA+GHCLLEMPTGTGKTI LLSLITSY 
Sbjct: 1   MKFVIEGLTVYFPYEFIYREQYAYMVELKHALDARGHCLLEMPTGTGKTITLLSLITSYQ 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPS-ARILALGLSSRKNLCXXX 455
           L+ PS   KL+YCTRTVHEMEK L ELR LH YQ K +G S A+ILALGLSSRKNLC   
Sbjct: 61  LANPSLA-KLIYCTRTVHEMEKVLDELRRLHLYQEKEIGSSRAKILALGLSSRKNLCIHP 119

Query: 456 XXXXXXXXXXXXAACRKLTASWVRALAIENPNVPTCSFFENYEKASSDAILPPGVYTLQD 635
                       A CRKLTASWVRA A  NP++ TCSF++ YEK  S+  LPPGVYTL D
Sbjct: 120 VVSSETSRESVDAGCRKLTASWVRAAAETNPDIETCSFYQGYEKQGSEQPLPPGVYTLHD 179

Query: 636 LRGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNI 815
           LR +G+++GWCPYFLAR M+QFANVVVY+YQYLLDPKV+GIISKEMQ+EC+VVFDEAHNI
Sbjct: 180 LRVYGRQRGWCPYFLARQMIQFANVVVYNYQYLLDPKVSGIISKEMQKECIVVFDEAHNI 239

Query: 816 DNVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           DNVCIEALSV++R+  L+GA+RN++K+ Q I R
Sbjct: 240 DNVCIEALSVNLRQNNLDGASRNIHKLNQIISR 272


>ref|XP_003559059.1| PREDICTED: DNA repair helicase UVH6-like [Brachypodium distachyon]
          Length = 752

 Score =  805 bits (2079), Expect(2) = 0.0
 Identities = 399/486 (82%), Positives = 437/486 (89%)
 Frame = +1

Query: 892  RWLRRLIGRFKATDAGRLRAEYNRLVEGLAQRGNLPLTDAWLSNPVLPDDILKEAVPGNI 1071
            R + + I RFKATDA RL AEY RLV+GLAQRGNLP++DAWL+N  LPDDILKEAVPGNI
Sbjct: 265  RHISQQIDRFKATDASRLNAEYRRLVDGLAQRGNLPISDAWLANLALPDDILKEAVPGNI 324

Query: 1072 RRAEHFLSVLRRLLQYLKGRLDTENVEKEGPVAFVASINAQTGIDQKMLKFCYDRLHSLM 1251
            R+AEHFL+VL RL++ L  R+DTENV  E PV+F  SI +  GI+   L+F YDRL SL+
Sbjct: 325  RKAEHFLTVLWRLVRNLDERVDTENVVNERPVSFATSIYSLAGIETTTLRFLYDRLQSLL 384

Query: 1252 LTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEPFDERMPHIPDPVLQLSCHDASLS 1431
            LTLEITDTDEF+HIQ ICDFATL+GTY RGFSIIIEP+D+RMP I DPV+QLSCHDASL+
Sbjct: 385  LTLEITDTDEFMHIQKICDFATLIGTYKRGFSIIIEPYDDRMPDIRDPVIQLSCHDASLA 444

Query: 1432 IKPVFDRFQSVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLP 1611
            I+PVF+RFQ+VVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLP
Sbjct: 445  IQPVFNRFQTVVITSGTLSPIDLYPRLLNFNPVISRSFTMSLTRDCICPMVLTRGSDQLP 504

Query: 1612 VSTKFDMRSDPGVVRNYGRLLLEMVSTVPDGVVCFFVSYSYMDGIVNSWNEMGILQDIMQ 1791
            VSTKFDMRSDPGVVRNYGRLLLEM S VPDG+VCFFVSYSYMDGIV+SWN+MGILQ+IMQ
Sbjct: 505  VSTKFDMRSDPGVVRNYGRLLLEMASAVPDGIVCFFVSYSYMDGIVSSWNDMGILQEIMQ 564

Query: 1792 HKLVFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGV 1971
            HKLVFIET DVVETTLALDNYR+ACDCGRGAVFFSVARGKV EGIDF+RHYGRLVIMFGV
Sbjct: 565  HKLVFIETPDVVETTLALDNYRKACDCGRGAVFFSVARGKVVEGIDFNRHYGRLVIMFGV 624

Query: 1972 PFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 2151
            PFQYTLS+IL ARLEYLRET QI+EGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR
Sbjct: 625  PFQYTLSKILRARLEYLRETSQIQEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKR 684

Query: 2152 YSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVTGGKKTLLSQ 2331
            YSRHDKRSKLPGWI SHL DAHLNLSTDMALH AREFLR+MAQPYDKAG +G  +  L  
Sbjct: 685  YSRHDKRSKLPGWIRSHLHDAHLNLSTDMALHTAREFLRRMAQPYDKAGSSGQTEENLQD 744

Query: 2332 EDLEKM 2349
            +  + M
Sbjct: 745  KARDAM 750



 Score =  326 bits (836), Expect(2) = 0.0
 Identities = 173/280 (61%), Positives = 203/280 (72%), Gaps = 8/280 (2%)
 Frame = +3

Query: 99  MKFQIEEVTVFFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYA 278
           M F ++ + V FPYD IYPEQ+ YM ELKRALDA+GH LLEMPTGTGKT AL+SLITSYA
Sbjct: 1   MWFDLDGLPVCFPYDAIYPEQHEYMGELKRALDARGHALLEMPTGTGKTAALISLITSYA 60

Query: 279 LSKPSNPPKLLYCTRTVHEMEKTLAELRLLHDYQLKHLGPS--ARILALGLSSRKNLCXX 452
           L+ PS P +L YCTRTVHEMEKTLAELRLL      HL P+   R+LALGLSSRKNLC  
Sbjct: 61  LANPSRPLRLFYCTRTVHEMEKTLAELRLL----FSHLPPADACRLLALGLSSRKNLCVH 116

Query: 453 XXXXXXXXXXXXXAACRKLTASWV--RALAIENPNVPTCSFFENYEKASSDAILP----P 614
                          CR+LTASWV  +A        P C +FE ++ A+    L     P
Sbjct: 117 PQVSASGAVD---TGCRRLTASWVCEKAAYDRESATPLCDYFETFDAAARKGDLALYIQP 173

Query: 615 GVYTLQDLRGFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVV 794
           GVYTL DLR  G+E+  CPYFLARHMV+ ANVVVYSYQYLLDP+VA I+S EMQ++CVVV
Sbjct: 174 GVYTLADLRSLGRERRICPYFLARHMVKHANVVVYSYQYLLDPRVASIVSSEMQKDCVVV 233

Query: 795 FDEAHNIDNVCIEALSVSVRRQTLEGATRNLNKMAQEIDR 914
           FDE HNIDNVCIEALSVS+R+QT++GA  NL  ++Q+IDR
Sbjct: 234 FDEVHNIDNVCIEALSVSIRKQTIQGAKGNLRHISQQIDR 273