BLASTX nr result
ID: Akebia23_contig00016570
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00016570
(573 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826399.1| hypothetical protein AMTR_s00004p00149230 [A... 147 3e-33
ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Sela... 116 4e-24
ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Sela... 115 6e-24
ref|XP_007027088.1| Pentatricopeptide repeat (PPR) superfamily p... 114 2e-23
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar... 113 4e-23
ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citr... 112 7e-23
ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arab... 112 7e-23
ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabi... 112 9e-23
ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutr... 111 2e-22
ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Caps... 111 2e-22
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi... 111 2e-22
ref|XP_002305565.1| hypothetical protein POPTR_0004s01330g [Popu... 111 2e-22
ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Sela... 110 2e-22
gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis] 108 8e-22
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,... 108 1e-21
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana] 107 3e-21
ref|NP_176454.1| pentatricopeptide repeat protein RPF2 [Arabidop... 107 3e-21
ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selag... 107 3e-21
ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Sela... 107 3e-21
>ref|XP_006826399.1| hypothetical protein AMTR_s00004p00149230 [Amborella trichopoda]
gi|548830713|gb|ERM93636.1| hypothetical protein
AMTR_s00004p00149230 [Amborella trichopoda]
Length = 648
Score = 147 bits (370), Expect = 3e-33
Identities = 75/186 (40%), Positives = 114/186 (61%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
I+LRGHC+ +NI+EAL +EKI+ GW+PD E LI L IEG V++A+++KN +
Sbjct: 422 IILRGHCLKRNISEALGWLEKIQKLGWKPDKESFKVLIQVLSIEGMVDKALQLKNQMMGV 481
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+I+ + Y ++I L KL +D+ T LL EM I+ + P K Y VI+G C++ +A
Sbjct: 482 SDIDSEVYCVLIEHLCKLGSMDQATGLLDEMEIRGISPIKPAYYPVIKGFCQMNFFGKAL 541
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ EM+ RG PD TY L + C++ R+ EAL LWED++ PD +T S + K
Sbjct: 542 SRIREMMDRGVGPDIHTYNCLIGSLCSRNRLQEALKLWEDMVRDRCSPDATTYSLVISKF 601
Query: 541 WKDGNV 558
+DG++
Sbjct: 602 CEDGDM 607
Score = 75.1 bits (183), Expect = 1e-11
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Frame = +1
Query: 40 EALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN------CIEIDQNINYDT 201
+AL++ +K+ +G PD NLI L + G+ EA++++N CIE + D
Sbjct: 330 KALKIFKKMVRRGHHPDQFLYTNLIGRLCVGGRTREALQLRNLMAEKGCIE-----DIDN 384
Query: 202 YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMV 381
Y +I+ + ++ ++ EMV +PD +++ GHC +NI EA L+++
Sbjct: 385 YKTLISGACRAGKMEMAEKVFREMVDIGCKPDLCILNIILRGHCLKRNISEALGWLEKIQ 444
Query: 382 SRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
G KPD +++ L +G + +AL L ++ VS + S VY
Sbjct: 445 KLGWKPDKESFKVLIQVLSIEGMVDKALQLKNQMM------GVSDIDSEVY 489
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSL---------------MIEGK 138
VL VK + EA +L+ ++ G+ P + CN +++ L M+EGK
Sbjct: 142 VLSSWVQVKKVNEASKLLAQMVDHGFIPGISTCNEVLNLLFSYKRSDSGRELFYQMLEGK 201
Query: 139 VEEAMEVKNCIEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVV 318
+ E ++ ++ I++ E K EL M KD PD Y +
Sbjct: 202 IGE-------------LDTQSFNIIMREYCKDGKFAEAIELFHLMREKDYTPDLNTYNTL 248
Query: 319 IEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGR 450
I G+C++ + C ++ +M+ +PD T + L C QGR
Sbjct: 249 IHGYCKVGEGERVCELVKQMLDMRIRPDSYTMSILIKELCRQGR 292
>ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein
SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 116 bits (291), Expect = 4e-24
Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKG-WEPDMEPCNNLISSLMIEGKVEEAME-VKNCIE 174
+V++G C + + ALEL ++++ G PD+ + ++ SL+ GKV++A V++ +
Sbjct: 917 VVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVS 976
Query: 175 IDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ N TY+ +++ L K LD T LL M P+ + Y +I+GHC+L I E
Sbjct: 977 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A +L+EMV GC+P+ TYT L AFC G+ +A+ L E ++E GY P++ T +S +
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096
Query: 535 KLWKDGNVNAEC 570
K V C
Sbjct: 1097 MFCKKDEVERAC 1108
Score = 102 bits (255), Expect = 6e-20
Identities = 57/188 (30%), Positives = 99/188 (52%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
VL G C + AL L+E++ +G PD+ +I+ L +V+EA V + I+
Sbjct: 271 VLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG 330
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ ++ DLD EL+ +M + RP+ + Y ++ CR +++ A
Sbjct: 331 CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAH 390
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L M+ GC PD Y+++ FC G++ EA DL E +I G +PDV+ LS+ + L
Sbjct: 391 QVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDAL 450
Query: 541 WKDGNVNA 564
K +++
Sbjct: 451 CKAAAIDS 458
Score = 95.1 bits (235), Expect = 1e-17
Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
++ GHC + I EA L+E++ G +P++ L+ + GK E+A+ V+ +E
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ K ++++R +LL+ M+ K P+ ++Y VI G C+ + E
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++L++M+S C PD T+ ++ A C R+ A +L+ + E G P++ T +S V+ L
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203
Query: 541 WK 546
K
Sbjct: 1204 CK 1205
Score = 89.7 bits (221), Expect = 5e-16
Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+LRG C ++A+ ++ K PD N +I+ L ++++A+ + + ++
Sbjct: 202 ILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 260
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N +Y +++ K N ++ LL +MV + PD ++Y VI G C+L + EAC
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
++D+M+ RGC+P+ TY +L FC G + A++L + E GY+P+ T ++ ++
Sbjct: 321 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 378
Score = 89.0 bits (219), Expect = 8e-16
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
V+ G C + + EA +++K+ +G +P++ L+ G ++ A+E V+ E
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ + ND++R ++L M+ PD +NY +I G C+ ++EA
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L++M+ RGC+PD ++L A C I A +L I PDV S ++ L
Sbjct: 426 DLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHAL 485
Query: 541 WK 546
K
Sbjct: 486 CK 487
Score = 89.0 bits (219), Expect = 8e-16
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
++ G C + EA +L+E++ +G PD+ + LI +L ++ A E+ + I +D
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ Y+I+I+ L K L L MV PD + Y V++G C+ + I +A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++ D M + G PD TY+ + +FC + A + E + E PDV T S+ + L
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590
Query: 541 WKDGNVN 561
K G V+
Sbjct: 591 CKAGTVD 597
Score = 87.4 bits (215), Expect = 2e-15
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G I A EL +++ KG + +++ L G+ +A V + E+ +
Sbjct: 167 LISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDA--VLHFREMSK 224
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D TY MIN LSK + LD LL EMV P+ +Y V+ G C+ ++ A
Sbjct: 225 TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA 284
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L++MV+RGC PD +YT++ C ++ EA + + +I+ G QP+V T + V
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344
Query: 538 LWKDGNVN 561
+ G+++
Sbjct: 345 FCRVGDLD 352
Score = 83.2 bits (204), Expect = 5e-14
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCI-EID 180
V+ G C + E + L+E++ PD+ N +I ++ +V+ A E+ N I E
Sbjct: 1129 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 1188
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKD-LRPDKLNYGVVIEGHCRLKNIKEA 357
N TY +++ L K D+ LL EM K PD + Y VI+G C+ K + A
Sbjct: 1189 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ +M+S G PDD TY+ + + C + EA ++ E +++ G+ P T + +
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308
Query: 538 LWKDGNVN 561
K GN++
Sbjct: 1309 FCKTGNLD 1316
Score = 82.0 bits (201), Expect = 1e-13
Identities = 47/186 (25%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
V+ G C + I +A L ++++ G PD+ + +I S + ++ A ++ ++ +
Sbjct: 516 VVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ + TY+ +IN L K +D+ ++ EM+ P+ + Y +I+G C++ +++A
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAA 635
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L+ M + C PD TYT L C R+ EA + ++ + G PD T + + L
Sbjct: 636 EMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695
Query: 541 WKDGNV 558
K N+
Sbjct: 696 QKTNNL 701
Score = 81.3 bits (199), Expect = 2e-13
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
++ C ++ A ++++ + G PD + +IS GK+ EA ++ + I
Sbjct: 376 IMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ + +I+ L K +D ELL + D PD + Y ++I C+ K + EA
Sbjct: 436 CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAE 495
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
LD MV C PD TY S+ C RI++A L++ + G PDV T S ++
Sbjct: 496 SWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF 555
Query: 541 WKDGNVNA 564
KD N+++
Sbjct: 556 CKDNNLDS 563
Score = 80.1 bits (196), Expect = 4e-13
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ C + A EL I+ G P++ N+L+ L + ++A + + Q
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY +I+ L K +DR +L +M+ L PD + Y +VI C+ + + EA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L+ M+ G P TY +L FC G + +AL++ + ++ G PDV T S +
Sbjct: 1284 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 1343
Query: 538 LWKDGNV 558
L K G +
Sbjct: 1344 LSKRGRL 1350
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G C + EA L++++ G P++ N +I G+++EA + + ++
Sbjct: 989 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 1048
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY ++++ K + L+ MV K P+ Y +++ C+ ++ AC
Sbjct: 1049 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 1108
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L M+ +GC P+ +Y ++ C ++ E + L E ++ PD+ T ++ + +
Sbjct: 1109 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168
Query: 541 WKDGNVN 561
K V+
Sbjct: 1169 CKTYRVD 1175
Score = 75.1 bits (183), Expect = 1e-11
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
V+ G C K + A +L ++ G PD + +ISSL ++EA N +E+
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA---NNVLELML 1291
Query: 184 NINYD----TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+D TY +I+ K +LD+ E+L ++ K PD + + + I+ + ++
Sbjct: 1292 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+A +L+ M+ G PD TY +L FC +A+DL+E + + G +PD +T ++ V
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 74.3 bits (181), Expect = 2e-11
Identities = 49/167 (29%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
Frame = +1
Query: 73 KGWEPDMEPCNNLISSLMIEGKVEEAMEV---KNCIEIDQNINYDTYAIMINELSKLNDL 243
+G+ D CN L+ +L+ + ++A++V K C + N T+ I+I+ L + D+
Sbjct: 838 EGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCC----SPNMFTFTILIHGLCRAGDI 893
Query: 244 DRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRG-CKPDDKTYTS 420
ELL EM + + + + VVI+G C + + A + EM G C PD TY++
Sbjct: 894 GTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYST 953
Query: 421 LFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVN 561
+ + G++ +A L ED++ G P+V T SS ++ L K G ++
Sbjct: 954 IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLD 1000
Score = 71.6 bits (174), Expect = 1e-10
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 2/176 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGK-GWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
++ G C + +A L+ ++ K G PD+ N +I L +V+ A ++ + D
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258
Query: 181 QNINYD-TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D TY+I+I+ L K +D +L M+ P + YG +I+G C+ N+ +A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSS 525
IL ++S+G PD T++ +GR+ +A +L E ++ G PD T ++
Sbjct: 1319 LEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374
Score = 57.4 bits (137), Expect = 3e-06
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 2/172 (1%)
Frame = +1
Query: 61 KIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDTYAIMINELSKLND 240
+I+G+ W D + LIS + GK+ A E+ + E+++ + + L L D
Sbjct: 152 RIEGQ-WGGDTVTYSTLISGFIRAGKILPAYELFD--EMNRKGLKAHAGVHKSILRGLCD 208
Query: 241 LDRVTELLTEM--VIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTY 414
+ ++ + + K PD + Y +I G + + +A +L+EMV G P+ +Y
Sbjct: 209 AGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 268
Query: 415 TSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAEC 570
++ FC R+ AL L E ++ G PDV + ++ + L K V+ C
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEAC 320
>ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein
SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 115 bits (289), Expect = 6e-24
Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV--KNCIEI 177
+L C + EA+EL + + KG+EPD+ + +IS L GKV EA+E+ IE
Sbjct: 84 LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ N Y +IN L K +++R +LL EM K PD + Y ++ G CR+ + EA
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
D M SRG PD Y L A +G+ EA+ L++DVI GY PD T +S +
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263
Query: 538 LWKDGNVN 561
L + N++
Sbjct: 264 LARKSNMD 271
Score = 101 bits (252), Expect = 1e-19
Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G C + ++EA + + + +G+ PD+ N L+ +L EGK +EAM++ K+ I
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY ++ L++ +++D E+ +MV P+ Y +V+ GHCR K + +A
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L+EM G PD TY L C + +A +L+ +++ G PD+ + S + L
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 541 WKDGNVN 561
K V+
Sbjct: 370 CKTNKVH 376
Score = 95.1 bits (235), Expect = 1e-17
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEI 177
I++ G+ + EA L E++ G EP + N+L+++ E K++EAME+ K E
Sbjct: 48 ILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELL-TEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ TY+ +I+ L K + E+L +M+ + + + Y +I G C+ +NI+
Sbjct: 108 GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIER 167
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A +L+EM S+G PD+ TY ++ C G++SEA ++ + GY PDV + +
Sbjct: 168 AYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227
Query: 535 KLWKDGNVN 561
L+K+G +
Sbjct: 228 ALYKEGKTD 236
Score = 84.0 bits (206), Expect = 3e-14
Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G N+ EA E+ +K+ G P+ + ++S KV++A +V + +I
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY I+++ L K N +D+ EL + MV PD ++Y VV+ G C+ + +A
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 379
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++ D M+ R PD T+ L C G++ EA DL + + G PD ++ + L
Sbjct: 380 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439
Query: 541 WKDG 552
K G
Sbjct: 440 RKQG 443
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
IVL GHC K + +A +++E++ G PD+ N L+ L V++A E+ + + +D
Sbjct: 294 IVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM-VD 352
Query: 181 QNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
D +Y++++N L K N + L M+ + L PD + + ++++G C+ + E
Sbjct: 353 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 412
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPD 507
A +LD+M GC PD Y +L QGR +A L + + E G+ D
Sbjct: 413 AKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 79.3 bits (194), Expect = 7e-13
Identities = 40/123 (32%), Positives = 70/123 (56%)
Frame = +1
Query: 190 NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIIL 369
N T+ +++ K L +L +M+ + PD + Y ++I+G+ + + EA +
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 370 DEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKD 549
+EMVS G +P TY SL AFC + ++ EA++L++ + E G++PDV T S+ + L K
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKT 126
Query: 550 GNV 558
G V
Sbjct: 127 GKV 129
Score = 65.9 bits (159), Expect = 7e-09
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = +1
Query: 109 LISSLMIEGKVEEAMEVKNCIEIDQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIK 282
++ S +GK+ + ++ + +D I+ D Y I+I+ +K +D L EMV
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQM-LDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV 72
Query: 283 DLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEA 462
L P Y ++ C+ +KEA + M +G +PD TY+++ C G+++EA
Sbjct: 73 GLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEA 132
Query: 463 LD-LWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
L+ L+ +IE G + ++ + L KD N+
Sbjct: 133 LEMLFHKMIERGCSANTVAYNALINGLCKDENI 165
>ref|XP_007027088.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508715693|gb|EOY07590.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 752
Score = 114 bits (285), Expect = 2e-23
Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N + A+EL E++K KG +PD N LI SL GK+EEA+ + +E
Sbjct: 405 LIQGLCLTRNHSIAMELFEEMKNKGCQPDEFTYNMLIDSLCCRGKLEEALSLLKEMESGG 464
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +I+ K + E+ EM I+ + + + Y +I+G C+ + ++EA
Sbjct: 465 CARNVITYNTLIDGFCKNKRIQDAEEIFDEMEIQGVSRNSVTYNTLIDGLCKSRRVEEAA 524
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A+D+ + + G +PD+ T + + L
Sbjct: 525 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAVDIVQTMTSNGCEPDIVTYGTLIGGL 584
Query: 541 WKDGNVN 561
K G V+
Sbjct: 585 CKAGRVD 591
Score = 101 bits (252), Expect = 1e-19
Identities = 56/177 (31%), Positives = 101/177 (57%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI-D 180
++ G C + ALE+++ + G++ D+ N+LIS L G++EEA+E+ N + + D
Sbjct: 300 LVNGLCKAGYVKHALEIMDAMLQDGFDLDIFTYNSLISGLCKIGEIEEAVEILNQMMLRD 359
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N A
Sbjct: 360 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIFPDVCTFNSLIQGLCLTRNHSIAM 419
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ +EM ++GC+PD+ TY L + C +G++ EAL L +++ GG +V T ++ +
Sbjct: 420 ELFEEMKNKGCQPDEFTYNMLIDSLCCRGKLEEALSLLKEMESGGCARNVITYNTLI 476
Score = 93.6 bits (231), Expect = 3e-17
Identities = 51/181 (28%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ G C I EAL+ I+ + +G+ PD N L++ L G V+ A+E+ + + D
Sbjct: 264 VLVHGFCKEGRIEEALDFIQIMTNEGFYPDQFTFNTLVNGLCKAGYVKHALEIMDAMLQD 323
Query: 181 Q-NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+++ TY +I+ L K+ +++ E+L +M+++D P+ + Y +I C+ ++EA
Sbjct: 324 GFDLDIFTYNSLISGLCKIGEIEEAVEILNQMMLRDCSPNTVTYNTLISTLCKENQVEEA 383
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ + S+G PD T+ SL C S A++L+E++ G QPD T + +
Sbjct: 384 TELARVLTSKGIFPDVCTFNSLIQGLCLTRNHSIAMELFEEMKNKGCQPDEFTYNMLIDS 443
Query: 538 L 540
L
Sbjct: 444 L 444
Score = 78.2 bits (191), Expect = 1e-12
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C + I EA+E++ ++ + P+ N LIS+L E +VEEA E+ + +
Sbjct: 335 LISGLCKIGEIEEAVEILNQMMLRDCSPNTVTYNTLISTLCKENQVEEATELARVLT-SK 393
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
I D T+ +I L + EL EM K +PD+ Y ++I+ C ++EA
Sbjct: 394 GIFPDVCTFNSLIQGLCLTRNHSIAMELFEEMKNKGCQPDEFTYNMLIDSLCCRGKLEEA 453
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L EM S GC + TY +L FC RI +A ++++++ G + T ++ +
Sbjct: 454 LSLLKEMESGGCARNVITYNTLIDGFCKNKRIQDAEEIFDEMEIQGVSRNSVTYNTLIDG 513
Query: 538 LWKDGNV 558
L K V
Sbjct: 514 LCKSRRV 520
Score = 75.5 bits (184), Expect = 9e-12
Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEI 177
I+++ C I A+ ++E++ G PD + ++ + EG ++ A+ ++ +E
Sbjct: 194 ILIKALCNAHQIRPAILMMEEMPSYGLSPDEKTFTTIMQGFIDEGNLDGALRIREQMVEA 253
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
Q + T ++++ K ++ + + M + PD+ + ++ G C+ +K A
Sbjct: 254 GQQVTNVTVNVLVHGFCKEGRIEEALDFIQIMTNEGFYPDQFTFNTLVNGLCKAGYVKHA 313
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
I+D M+ G D TY SL C G I EA+++ ++ P+ T ++ +
Sbjct: 314 LEIMDAMLQDGFDLDIFTYNSLISGLCKIGEIEEAVEILNQMMLRDCSPNTVTYNTLIST 373
Query: 538 LWKDGNV 558
L K+ V
Sbjct: 374 LCKENQV 380
Score = 73.6 bits (179), Expect = 4e-11
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Frame = +1
Query: 142 EEAMEVKNCIEIDQNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGV 315
+E ++V +E + + DT Y ++N L N L V MV + ++PD + +
Sbjct: 135 DEILDVVELMESEFGLKSDTHFYNFLLNVLVDGNKLKLVEAAHNGMVSRGVKPDVSTFNI 194
Query: 316 VIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGG 495
+I+ C I+ A ++++EM S G PD+KT+T++ F +G + AL + E ++E G
Sbjct: 195 LIKALCNAHQIRPAILMMEEMPSYGLSPDEKTFTTIMQGFIDEGNLDGALRIREQMVEAG 254
Query: 496 YQPDVSTLSSAVYKLWKDGNV 558
Q T++ V+ K+G +
Sbjct: 255 QQVTNVTVNVLVHGFCKEGRI 275
>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
Length = 763
Score = 113 bits (282), Expect = 4e-23
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N A++L E++K KG +PD N LI SL GKVEEA+ + +E
Sbjct: 416 LIQGLCLTRNFKAAMKLFEEMKNKGCQPDEFTYNMLIDSLCSRGKVEEALRLLKEMESSG 475
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +I L K+ ++ E+ EM ++ + + + Y +I+G C+ + +++A
Sbjct: 476 CPRNVVTYNTLIAGLCKIKKIEDAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRLEDAA 535
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL +C G I A D+ + + G +PD+ T + + L
Sbjct: 536 QLMDQMIMEGLKPDKFTYNSLLTYYCRSGDIKRAADIVQTMTLDGCEPDIVTYGTLIGGL 595
Query: 541 WKDGNV 558
K G V
Sbjct: 596 CKAGRV 601
Score = 107 bits (267), Expect = 2e-21
Identities = 58/182 (31%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI-D 180
++ G C ++ +ALE+++ + G++PD+ N+LIS G+VEEA+E+ + + + D
Sbjct: 311 LVNGLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGEVEEAVEILDQMILRD 370
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N K A
Sbjct: 371 CSPNTVTYNTLISTLCKENQIEEATELARALTSKGILPDVCTFNSLIQGLCLTRNFKAAM 430
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ +EM ++GC+PD+ TY L + C++G++ EAL L +++ G +V T ++ + L
Sbjct: 431 KLFEEMKNKGCQPDEFTYNMLIDSLCSRGKVEEALRLLKEMESSGCPRNVVTYNTLIAGL 490
Query: 541 WK 546
K
Sbjct: 491 CK 492
Score = 95.1 bits (235), Expect = 1e-17
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNC-IEI 177
+++ G C I +AL I+++ +G+ PD N L++ L G V++A+EV + ++
Sbjct: 275 VLVHGFCKEGRIEDALSFIQEVASEGFYPDQFTFNTLVNGLCKTGHVKQALEVMDVMLQA 334
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ + TY +I+ KL +++ E+L +M+++D P+ + Y +I C+ I+EA
Sbjct: 335 GFDPDVFTYNSLISGFCKLGEVEEAVEILDQMILRDCSPNTVTYNTLISTLCKENQIEEA 394
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ + S+G PD T+ SL C A+ L+E++ G QPD T + +
Sbjct: 395 TELARALTSKGILPDVCTFNSLIQGLCLTRNFKAAMKLFEEMKNKGCQPDEFTYNMLIDS 454
Query: 538 LWKDGNV 558
L G V
Sbjct: 455 LCSRGKV 461
Score = 83.6 bits (205), Expect = 3e-14
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
+++G ++ AL + E++ G E N L+ EG++E+A+ ++
Sbjct: 241 LMQGFIEEGDLDGALRIREQMVENGCEATNVTVNVLVHGFCKEGRIEDALSFIQEVASEG 300
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ T+ ++N L K + + E++ M+ PD Y +I G C+L ++EA
Sbjct: 301 FYPDQFTFNTLVNGLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGEVEEAV 360
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
ILD+M+ R C P+ TY +L C + +I EA +L + G PDV T +S + L
Sbjct: 361 EILDQMILRDCSPNTVTYNTLISTLCKENQIEEATELARALTSKGILPDVCTFNSLIQGL 420
Query: 541 WKDGNVNA 564
N A
Sbjct: 421 CLTRNFKA 428
Score = 75.1 bits (183), Expect = 1e-11
Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Frame = +1
Query: 49 ELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIMINE 222
E++++IK G + + I S +E + V +E + + DT Y ++N
Sbjct: 115 EILQEIKAAGCQINRGTFLIFIESYAKFELYDEIITVTRIMEEEFGLEPDTHFYNFLLNV 174
Query: 223 LSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPD 402
L N L V ++MV + ++PD + ++I+ CR I+ A ++++EM S G P+
Sbjct: 175 LVDGNKLKLVETAHSDMVSRGIKPDASTFNILIKALCRAHQIRPAILMMEEMPSYGLVPN 234
Query: 403 DKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
+KT+T+L F +G + AL + E ++E G + T++ V+ K+G +
Sbjct: 235 EKTFTTLMQGFIEEGDLDGALRIREQMVENGCEATNVTVNVLVHGFCKEGRI 286
Score = 67.0 bits (162), Expect = 3e-09
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Frame = +1
Query: 73 KGWEPDMEPCNNLISSLMIEGKVEEA-MEVKNCIEIDQNINYDTYAIMINELSKLNDLDR 249
+G +PD N LI +L ++ A + ++ N T+ ++ + DLD
Sbjct: 194 RGIKPDASTFNILIKALCRAHQIRPAILMMEEMPSYGLVPNEKTFTTLMQGFIEEGDLDG 253
Query: 250 VTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFV 429
+ +MV + V++ G C+ I++A + E+ S G PD T+ +L
Sbjct: 254 ALRIREQMVENGCEATNVTVNVLVHGFCKEGRIEDALSFIQEVASEGFYPDQFTFNTLVN 313
Query: 430 AFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
C G + +AL++ + +++ G+ PDV T +S + K G V
Sbjct: 314 GLCKTGHVKQALEVMDVMLQAGFDPDVFTYNSLISGFCKLGEV 356
>ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citrus clementina]
gi|568854342|ref|XP_006480788.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Citrus sinensis]
gi|557531109|gb|ESR42292.1| hypothetical protein
CICLE_v10013605mg [Citrus clementina]
Length = 768
Score = 112 bits (280), Expect = 7e-23
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ N A+EL +++K KG +PD N LI SL G +EEA+++ +E
Sbjct: 417 LIQGLCLTSNFDLAMELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSG 476
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +I+ KL ++ E+ EM I+ + + + Y +I+G C+ + +++A
Sbjct: 477 CARNVVTYNTLIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAA 536
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL +C G I A D+ +++ G +PD+ T + + L
Sbjct: 537 QLMDQMIMEGLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGL 596
Query: 541 WKDGNV 558
K G V
Sbjct: 597 CKAGRV 602
Score = 105 bits (263), Expect = 7e-21
Identities = 58/177 (32%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI-D 180
++ G C V ++ +ALE+++ + +G++PD+ N+LIS L G+VEEA+E+ N + + D
Sbjct: 312 LVNGLCKVGHVKQALEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRD 371
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C N A
Sbjct: 372 CSPNTITYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDLAM 431
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ EM ++GC+PD+ TY L + C++G + EAL L +++ G +V T ++ +
Sbjct: 432 ELFQEMKTKGCQPDEFTYNMLIDSLCSRGMLEEALKLLKEMESSGCARNVVTYNTLI 488
Score = 94.7 bits (234), Expect = 2e-17
Identities = 51/186 (27%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ G C I +AL I+++ +G+ PD N L++ L G V++A+EV + + +
Sbjct: 276 VLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQALEVMDMM-LQ 334
Query: 181 QNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ + D TY +I+ L KL +++ E+L +M+++D P+ + Y +I C+ ++E
Sbjct: 335 EGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLISTLCKENQVEE 394
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A + + S+G PD T+ SL C A++L++++ G QPD T + +
Sbjct: 395 ATELARVLTSKGILPDVCTFNSLIQGLCLTSNFDLAMELFQEMKTKGCQPDEFTYNMLID 454
Query: 535 KLWKDG 552
L G
Sbjct: 455 SLCSRG 460
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 1/187 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEI 177
I+++ C I A+ ++E++ G G PD L+ L+ EG ++ A+ ++ +E
Sbjct: 206 ILIKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEH 265
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ T ++++ K ++ + EMV + PD+ Y ++ G C++ ++K+A
Sbjct: 266 GCLVTNVTVNVLVHGFCKEGRIEDALSFIQEMVSEGFNPDQFTYNTLVNGLCKVGHVKQA 325
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
++D M+ G PD TY SL C G + EA+++ +I P+ T ++ +
Sbjct: 326 LEVMDMMLQEGFDPDVFTYNSLISGLCKLGEVEEAVEILNQMILRDCSPNTITYNTLIST 385
Query: 538 LWKDGNV 558
L K+ V
Sbjct: 386 LCKENQV 392
Score = 65.5 bits (158), Expect = 1e-08
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C +K I EA E+ ++++ +G + N LI L +VE+A ++ + + I +
Sbjct: 487 LIDGFCKLKRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IME 545
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY ++ + D+ R +++ M PD + YG +I G C+ ++ A
Sbjct: 546 GLKPDKFTYNSLLTYYCRAGDIKRAADIVQNMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 605
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVST 516
+L + +G + Y + A + R +EA+ L+ +++E PD T
Sbjct: 606 SKLLRSIQMKGIVLTPQAYNPVIQALFRRKRTTEAMRLFREMMEKADPPDALT 658
Score = 64.7 bits (156), Expect = 2e-08
Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Frame = +1
Query: 145 EAMEVKNCIEIDQNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVV 318
E +EV ++ D + +T Y ++N L N L V +MV + ++PD + ++
Sbjct: 148 EILEVTQLMKDDFGLEPNTHFYNHLLNVLVDGNKLKLVETAHADMVSRGIKPDVSTFNIL 207
Query: 319 IEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGY 498
I+ C+ I+ A ++++EM G PD++T+T+L +G + AL + E ++E G
Sbjct: 208 IKALCKAHQIRPAILMMEEMPGYGLAPDERTFTTLMQGLIEEGNLDGALRIREQMVEHGC 267
Query: 499 QPDVSTLSSAVYKLWKDGNV 558
T++ V+ K+G +
Sbjct: 268 LVTNVTVNVLVHGFCKEGRI 287
>ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata] gi|297322059|gb|EFH52480.1| hypothetical protein
ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata]
Length = 754
Score = 112 bits (280), Expect = 7e-23
Identities = 59/186 (31%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N A+EL E+++ KG EPD N LI SL +GK++EA+ + +E+
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I+ K N + E+ EM + + + + Y +I+G C+ + +++A
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAS 525
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A D+ + + G +PD+ T + + L
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 541 WKDGNV 558
K G V
Sbjct: 586 CKAGRV 591
Score = 100 bits (249), Expect = 3e-19
Identities = 54/177 (30%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
++ G C ++ A+E+++ + +G++PD+ N++IS L G+V+EA+E + I D
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD 360
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ +EM S+GC+PD+ TY L + C++G++ EAL++ + + G V T ++ +
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Score = 85.9 bits (211), Expect = 7e-15
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGK-GWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI 177
+++ G C + +AL I+++ + G+ PD N L++ L G V+ A+E+ + + +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD-VML 322
Query: 178 DQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+ + D TY +I+ L KL ++ E L +M+ +D P+ + Y +I C+ ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
EA + + S+G PD T+ SL C A++L+E++ G +PD T + +
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 532 YKLWKDGNVNAECN 573
L G ++ N
Sbjct: 443 DSLCSKGKLDEALN 456
Score = 82.4 bits (202), Expect = 8e-14
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 2/181 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G+ ++ AL + E++ G N ++ EG+VE+A+ +
Sbjct: 230 IMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 184 NINYDTYAI--MINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D Y ++N L K + E++ M+ + PD Y VI G C+L +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
LD+M++R C P+ TY +L C + ++ EA +L + G PDV T +S +
Sbjct: 350 VEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 538 L 540
L
Sbjct: 410 L 410
Score = 69.3 bits (168), Expect = 7e-10
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Frame = +1
Query: 49 ELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIMINE 222
+++E +K G E P LI S +E + V + + D + DT Y M+N
Sbjct: 104 KILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNL 163
Query: 223 LSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPD 402
L N+L V +M + ++PD + V+I+ CR ++ A ++L++M S G PD
Sbjct: 164 LVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 403 DKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAECN 573
+KT+T++ + +G + AL + E ++E G +++ V+ K+G V N
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/163 (20%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID- 180
++ G C I EA E+ ++++ G + N LI L +VE+A ++ + + ++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
Q + TY ++ + D+ + +++ M PD + YG +I G C+ ++ A
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
+L + +G Y + + + +EA++L+ +++E
Sbjct: 596 KLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
>ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis
thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400
[Arabidopsis thaliana] gi|332645608|gb|AEE79129.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 754
Score = 112 bits (279), Expect = 9e-23
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N A+EL E+++ KG EPD N LI SL +GK++EA+ + +E+
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I+ K N E+ EM + + + + Y +I+G C+ + +++A
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A D+ + + G +PD+ T + + L
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 541 WKDGNV 558
K G V
Sbjct: 586 CKAGRV 591
Score = 101 bits (252), Expect = 1e-19
Identities = 55/177 (31%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
++ G C ++ A+E+++ + +G++PD+ N++IS L G+V+EA+EV + I D
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ +EM S+GC+PD+ TY L + C++G++ EAL++ + + G V T ++ +
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Score = 86.3 bits (212), Expect = 5e-15
Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGK-GWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI 177
+++ G C + +AL I+++ + G+ PD N L++ L G V+ A+E+ + + +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD-VML 322
Query: 178 DQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+ + D TY +I+ L KL ++ E+L +M+ +D P+ + Y +I C+ ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
EA + + S+G PD T+ SL C A++L+E++ G +PD T + +
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 532 YKLWKDGNVNAECN 573
L G ++ N
Sbjct: 443 DSLCSKGKLDEALN 456
Score = 84.0 bits (206), Expect = 3e-14
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
V++G+ ++ AL + E++ G N ++ EG+VE+A+ +
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 184 NINYDTYAI--MINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D Y ++N L K + E++ M+ + PD Y VI G C+L +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+LD+M++R C P+ TY +L C + ++ EA +L + G PDV T +S +
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 538 L 540
L
Sbjct: 410 L 410
Score = 63.2 bits (152), Expect = 5e-08
Identities = 43/175 (24%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C + + +A +L++++ +G +PD N+L++ G +++A ++ + +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I+ L K ++ ++LL + +K + Y VI+G R + EA
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 361 IILDEMVSRG-CKPDDKTYTSLFVAFCT-QGRISEALDLWEDVIEGGYQPDVSTL 519
+ EM+ + PD +Y +F C G I EA+D +++E G+ P+ S+L
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Score = 61.2 bits (147), Expect = 2e-07
Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Frame = +1
Query: 49 ELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIMINE 222
+++E +K E LI S +E + V + + + + DT Y M+N
Sbjct: 104 KILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL 163
Query: 223 LSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPD 402
L N L V +M + ++PD + V+I+ CR ++ A ++L++M S G PD
Sbjct: 164 LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 403 DKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAECN 573
+KT+T++ + +G + AL + E ++E G +++ V+ K+G V N
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Score = 59.7 bits (143), Expect = 5e-07
Identities = 45/190 (23%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIE-KIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI 177
I++ + + E L +++ I G +PD N +++ L+++G + +E+ +
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMS 181
Query: 178 DQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
I D T+ ++I L + + L +L +M L PD+ + V++G+ ++
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVI-EGGYQPDVSTLSSA 528
A I ++MV GC + + + FC +GR+ +AL+ +++ + G+ PD T ++
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 529 VYKLWKDGNV 558
V L K G+V
Sbjct: 302 VNGLCKAGHV 311
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 1/168 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID- 180
++ G C EA E+ ++++ G + N LI L +VE+A ++ + + ++
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
Q + TY ++ + D+ + +++ M PD + YG +I G C+ ++ A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQP 504
+L + +G Y + + + +EA++L+ +++E P
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
>ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutrema salsugineum]
gi|557104782|gb|ESQ45116.1| hypothetical protein
EUTSA_v10010142mg [Eutrema salsugineum]
Length = 754
Score = 111 bits (277), Expect = 2e-22
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N A+EL E+++ KG EPD N LI SL +GK++EA+ + +E
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMESSG 465
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I+ K N + E+ EM + + + + Y +I+G C+ + +++A
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A D+ + + G +PD+ T + + L
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
Query: 541 WKDGNV 558
K G V
Sbjct: 586 CKAGRV 591
Score = 103 bits (256), Expect = 4e-20
Identities = 55/177 (31%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
++ G C ++ A+E+++ + +G++PD+ N++IS L G+V+EA+EV + I D
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCRLGEVKEAVEVLDQMISRD 360
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ +EM S+GC+PD+ TY L + C++G++ EAL++ + + G V T ++ +
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMESSGCARSVITYNTLI 477
Score = 87.8 bits (216), Expect = 2e-15
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++GH ++ AL + E++ G N ++ EG+VE+A+ +
Sbjct: 230 IMQGHIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQDMSNQG 289
Query: 184 NINYDTYAI--MINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D Y ++N L K + E++ M+ + PD Y VI G CRL +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCRLGEVKEA 349
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+LD+M+SR C P+ TY +L C + ++ EA +L + G PDV T +S +
Sbjct: 350 VEVLDQMISRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 538 L 540
L
Sbjct: 410 L 410
Score = 84.0 bits (206), Expect = 3e-14
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKG-WEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI 177
+++ G C + +AL I+ + +G + PD N L++ L G V+ A+E+ + + +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQDMSNQGGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD-VML 322
Query: 178 DQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+ + D TY +I+ L +L ++ E+L +M+ +D P+ + Y +I C+ ++
Sbjct: 323 QEGYDPDVYTYNSVISGLCRLGEVKEAVEVLDQMISRDCSPNTVTYNTLISTLCKENQVE 382
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
EA + + S+G PD T+ SL C A++L+E++ G +PD T + +
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 532 YKLWKDGNVNAECN 573
L G ++ N
Sbjct: 443 DSLCSKGKLDEALN 456
Score = 63.9 bits (154), Expect = 3e-08
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Frame = +1
Query: 76 GWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYD--TYAIMINELSKLNDLDR 249
G +PD N +++ L+++G + +E+ + I D T+ ++I L + + L
Sbjct: 149 GLKPDTHFYNRMLN-LLVDGNNLKLVEIAHAEMSFWEIKPDVSTFNVLIKALCRAHQLRP 207
Query: 250 VTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFV 429
++ +M L PD+ + +++GH ++ A I ++MV GC + + +
Sbjct: 208 AILMMEDMPSYGLVPDEKTFTTIMQGHIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 430 AFCTQGRISEALDLWEDVI-EGGYQPDVSTLSSAVYKLWKDGNV 558
FC +GR+ +AL+ +D+ +GG+ PD T ++ V L K G+V
Sbjct: 268 GFCKEGRVEDALNFIQDMSNQGGFFPDQYTFNTLVNGLCKAGHV 311
Score = 62.4 bits (150), Expect = 8e-08
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Frame = +1
Query: 40 EALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIM 213
E + ++ +K E P LI S +E + + + + + DT Y M
Sbjct: 101 EMRKFLKDMKNSACEMGTSPFLILIESYAQFDLHDEILAAAHWMIDEFGLKPDTHFYNRM 160
Query: 214 INELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGC 393
+N L N+L V EM +++PD + V+I+ CR ++ A +++++M S G
Sbjct: 161 LNLLVDGNNLKLVEIAHAEMSFWEIKPDVSTFNVLIKALCRAHQLRPAILMMEDMPSYGL 220
Query: 394 KPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAECN 573
PD+KT+T++ +G + AL + E ++E G +++ V+ K+G V N
Sbjct: 221 VPDEKTFTTIMQGHIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN 280
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/163 (20%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID- 180
++ G C I EA E+ ++++ G + N LI L +VE+A ++ + + ++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
Q + TY ++ + D+ + +++ M PD + YG +I G C+ ++ A
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
+L + +G Y + + + +EA++L+ +++E
Sbjct: 596 KLLRSIQMKGIVLTPHAYNPVIQGLFRKRKTTEAVNLFREMLE 638
>ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Capsella rubella]
gi|482561562|gb|EOA25753.1| hypothetical protein
CARUB_v10019115mg [Capsella rubella]
Length = 754
Score = 111 bits (277), Expect = 2e-22
Identities = 58/186 (31%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ +N A+EL ++++ KG EPD N LI SL +GK++EA+++ +E
Sbjct: 406 LIQGLCLTRNHRVAMELFDEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALDMLKQMESSG 465
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I+ K N + E+ EM + + + + Y +I+G C+ + +++A
Sbjct: 466 CARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A D+ + + G +PD+ T + + L
Sbjct: 526 QLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQTMTSNGCEPDIVTYGTLISGL 585
Query: 541 WKDGNV 558
K G V
Sbjct: 586 CKAGRV 591
Score = 106 bits (264), Expect = 5e-21
Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
++ G C ++ A+E+++ + +G++PD+ N++IS L G+V+EA+EV + I D
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C +N + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ DEM S+GC+PD+ TY L + C++G++ EALD+ + + G V T ++ +
Sbjct: 421 ELFDEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALDMLKQMESSGCARSVITYNTLI 477
Score = 83.6 bits (205), Expect = 3e-14
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G+ ++ AL + E++ G N +++ EG+VE+A+ +
Sbjct: 230 IMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVNGFCKEGRVEDALNFIQEMSNQG 289
Query: 184 NINYDTYAI--MINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D Y ++N L K + E++ M+ + PD Y VI G C+L +KEA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+LD+M++R C P+ TY +L C + ++ EA +L + G PDV T +S +
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 538 L 540
L
Sbjct: 410 L 410
Score = 67.8 bits (164), Expect = 2e-09
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Frame = +1
Query: 49 ELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIMINE 222
E++ +K G E P LI + +E + V + + D + DT Y M+N
Sbjct: 104 EILGDMKSSGCEMGTSPFLILIENYAQFELYDEILGVVHLMIDDFGLKPDTHFYNRMLNL 163
Query: 223 LSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPD 402
L N+L V EM + ++PD + V+I+ CR ++ A ++L++M S G PD
Sbjct: 164 LVDGNNLKLVEIAHAEMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 403 DKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAECN 573
+KT+T++ + +G + AL + E ++E G +++ V K+G V N
Sbjct: 224 EKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVNGFCKEGRVEDALN 280
Score = 59.3 bits (142), Expect = 7e-07
Identities = 35/163 (21%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID- 180
++ G C I EA E+ ++++ G + N LI L +VE+A ++ + + ++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
Q + TY ++ + D+ + +++ M PD + YG +I G C+ ++ A
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQTMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
+L + +G Y + A + + +EA++L+ +++E
Sbjct: 596 KLLRSIQMKGIALTPHAYNPVIQALFRKRKTTEAINLFREMLE 638
>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 111 bits (277), Expect = 2e-22
Identities = 59/186 (31%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ N A++L E++KGKG PD N LI SL K+EEA+ + +E++
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N Y +I+ K ++ E+ EM ++ + D + Y +I+G C+ K +++A
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G +PD TY SL FC G I +A D+ + + G PD+ T ++ + L
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598
Query: 541 WKDGNV 558
K G V
Sbjct: 599 CKAGRV 604
Score = 94.7 bits (234), Expect = 2e-17
Identities = 50/161 (31%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
++ G C + + A+E+++ + G +PD+ N+LIS L G++EEA+++ + + D
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N +D TE+ + K + PD + +I+G C N K A
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDV 483
+ +EM +GC+PD+ TY L + C+ ++ EAL+L +++
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Score = 90.5 bits (223), Expect = 3e-16
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 3/183 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCI--- 171
+++ G C I +AL I++ +G+ PD N L++ L G + AMEV + +
Sbjct: 278 VLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLG 337
Query: 172 EIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+D +I TY +I+ L KL +++ ++L +MV +D P+ + Y +I C+ +
Sbjct: 338 GLDPDIY--TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
EA I + S+G PD T+ SL C A+DL+E++ G +PD T + +
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455
Query: 532 YKL 540
L
Sbjct: 456 DSL 458
Score = 89.4 bits (220), Expect = 6e-16
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 1/185 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
+++G+ N+ AL + E++ G N LI+ +G++++A+ ++ +
Sbjct: 244 IMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG 303
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY ++N L K+ E++ M++ L PD Y +I G C+L I+EA
Sbjct: 304 FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAV 363
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
ILD+MVSR C P+ TY ++ + C + R+ EA ++ + G PDV T +S + L
Sbjct: 364 KILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGL 423
Query: 541 WKDGN 555
N
Sbjct: 424 CLSSN 428
Score = 84.3 bits (207), Expect = 2e-14
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEI 177
I+++ C + A+ ++E++ G PD ++ + G ++ A+ +K +E
Sbjct: 208 ILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEY 267
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
T ++IN K +D+ + E V + RPD+ Y ++ G C++ + K A
Sbjct: 268 GCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHA 327
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
++D M+ G PD TY SL C G I EA+ + + ++ P+ T ++ +
Sbjct: 328 MEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISS 387
Query: 538 LWKDGNVN 561
L K+ V+
Sbjct: 388 LCKENRVD 395
Score = 71.2 bits (173), Expect = 2e-10
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +1
Query: 106 NLISSLMIEGKVEEAMEVKNCIEIDQNINYD--TYAIMINELSKLNDLDRVTELLTEMVI 279
N++ +++++ + +E + + + I +D T+ I+I L K + + ++ EM
Sbjct: 172 NVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS 231
Query: 280 KDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISE 459
L PD+ + +++G+ N+ A I ++MV GC D T L FC QGRI +
Sbjct: 232 YGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQ 291
Query: 460 ALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGN 555
AL ++ + G++PD T ++ V L K G+
Sbjct: 292 ALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Score = 63.9 bits (154), Expect = 3e-08
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K I EA E+ ++++ +G D N LI L +VE+A ++ + + I +
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM-IME 547
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY ++ K D+ + +++ M PD + Y +I G C+ ++ A
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVA 607
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVST 516
+L + +G Y + A + R EA+ L+ ++++ PD T
Sbjct: 608 SRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAIT 660
Score = 56.2 bits (134), Expect = 6e-06
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+L C +I +A ++++ + G PD+ LIS L G+V+ A + I++
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Query: 184 NI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKN-IKEA 357
+ Y +I L K N L EM+ K PD + Y +V G C I EA
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEA 678
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
EM+ RG P+ ++ L CT + L + ++E
Sbjct: 679 VDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIME 722
>ref|XP_002305565.1| hypothetical protein POPTR_0004s01330g [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| hypothetical protein
POPTR_0004s01330g [Populus trichocarpa]
Length = 757
Score = 111 bits (277), Expect = 2e-22
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEA------MEVKN 165
+++G C+ +N T A+EL +++K KG PD N LI SL GK++EA MEV
Sbjct: 412 LIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471
Query: 166 CIEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKN 345
C N TY +I+ K + E+ +M ++ + + + Y +I+G C+ +
Sbjct: 472 CAR-----NVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Query: 346 IKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSS 525
++EA ++D+M+ G +PD TY SL FC G I +A D+ + + G +PD+ T +
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586
Query: 526 AVYKLWKDGNVNA 564
+ L K G V A
Sbjct: 587 LIAGLCKAGRVEA 599
Score = 98.2 bits (243), Expect = 1e-18
Identities = 57/178 (32%), Positives = 102/178 (57%), Gaps = 1/178 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEI 177
+++ G ++ ALE+++ + +G++PD+ N+LIS L G+V+EA++V N IE
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D + N TY +I+ L K N ++ T+L + K + PD Y +I+G C +N A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ EM ++GC PD+ TY L + C +G++ EAL+L +++ G +V T ++ +
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483
Score = 84.3 bits (207), Expect = 2e-14
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIK-GKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI 177
+++ G C I EAL IE++ +G+ PD N L++ L G V+ A+EV + + +
Sbjct: 270 VLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMM-L 328
Query: 178 DQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+ + D TY +I+ L KL ++D ++L +M+ +D P+ + Y +I C+ ++
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
EA + + +G PD TY SL C + A++L++++ G PD T + +
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLI 448
Query: 532 YKLWKDGNVNAECN 573
L G + N
Sbjct: 449 DSLCFRGKLQEALN 462
Score = 79.7 bits (195), Expect = 5e-13
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 2/181 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G N+ A+ + E++ G N L++ EG++EEA+ + + +
Sbjct: 236 IMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLRE 295
Query: 184 NINYDTYA--IMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
D Y +++N LSK + E++ M+ + PD Y +I G C+L + EA
Sbjct: 296 GFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEA 355
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L++M+ R C P+ TY ++ C + ++ EA L + G PDV T +S +
Sbjct: 356 VKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQG 415
Query: 538 L 540
L
Sbjct: 416 L 416
Score = 71.2 bits (173), Expect = 2e-10
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C + + EA +L++++ +G PD N+L++ G +++A ++ + D
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I L K ++ T+LL + +K + Y VI+ R K KEA
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCT-QGRISEALDLWEDVIEGGYQPDVST 516
+ EM+ + PD TY +F C G I EA+D +++E GY P+ S+
Sbjct: 637 RLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSS 689
Score = 68.2 bits (165), Expect = 2e-09
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = +1
Query: 112 ISSLMIEGKVEEAMEVKNCIEIDQNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKD 285
I S G E ++ + +E++ + +T Y ++N L N L V + MV +
Sbjct: 131 IESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRG 190
Query: 286 LRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEAL 465
+RPD + ++I+ CR I+ A ++++EM G PD+KT+T++ F +G + A+
Sbjct: 191 IRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAM 250
Query: 466 DLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
+ E ++E G T++ V K+G +
Sbjct: 251 RVKEQMVEAGCVVTNVTVNVLVNGFCKEGRI 281
Score = 64.7 bits (156), Expect = 2e-08
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 106 NLISSLMIEGKVEEAMEVKNCIEIDQNINYD--TYAIMINELSKLNDLDRVTELLTEMVI 279
N + +++++G + +E+ + + + I D T+ I+I L + + + L+ EM
Sbjct: 164 NFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMED 223
Query: 280 KDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISE 459
L PD+ + +++G N+ A + ++MV GC + T L FC +GRI E
Sbjct: 224 FGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEE 283
Query: 460 ALDLWEDV-IEGGYQPDVSTLSSAVYKLWKDGNV 558
AL E++ + G+ PD T + V L K G+V
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHV 317
>ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein
SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 110 bits (276), Expect = 2e-22
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 2/191 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKG-WEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEI 177
++ G C + + AL+L ++++ G PD+ + ++ SL+ GKV++A V+ +
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ N TY+ +++ L K LD T LL M P+ + Y +I+GHC+L I EA
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L+EMV GC+P+ TYT L AFC G+ +A+ L E ++E GY P++ T +S +
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369
Query: 538 LWKDGNVNAEC 570
K V C
Sbjct: 370 FCKKDEVERAC 380
Score = 95.1 bits (235), Expect = 1e-17
Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 1/182 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
++ GHC + I EA L+E++ G +P++ L+ + GK E+A+ V+ +E
Sbjct: 296 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 355
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ K ++++R +LL+ M+ K P+ ++Y VI G C+ + E
Sbjct: 356 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 415
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++L++M+S C PD T+ ++ A C R+ A +L+ + E G P++ T +S V+ L
Sbjct: 416 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 475
Query: 541 WK 546
K
Sbjct: 476 CK 477
Score = 91.3 bits (225), Expect = 2e-16
Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+LRG C ++A+ ++ K PD N +I+ L ++++A+ + + ++
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N +Y +++ K N ++ LL +MV++ PD ++Y VI G C+L + EAC
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ RGC+P+ TY +L FC G + A++L + E GY+P+ T ++ ++ L
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194
Score = 85.9 bits (211), Expect = 7e-15
Identities = 50/196 (25%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEA------MEVKN 165
++ G + +A+ L+E++ G+ P++ N ++ +VE A M ++
Sbjct: 50 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG 109
Query: 166 CIEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKN 345
C + +Y +IN L KL+ +D ++ +M+ + +P+ + YG +++G CR+ +
Sbjct: 110 CPP-----DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 164
Query: 346 IKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE-GGYQPDVSTLS 522
+ A ++ +M RG +P+ TY ++ C+ ++ AL L++++ E G PDV T S
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224
Query: 523 SAVYKLWKDGNVNAEC 570
+ V L K G V+ C
Sbjct: 225 TIVDSLVKSGKVDDAC 240
Score = 83.2 bits (204), Expect = 5e-14
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCI-EID 180
V+ G C + E + L+E++ PD+ N +I ++ +V+ A E+ N I E
Sbjct: 401 VIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESG 460
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKD-LRPDKLNYGVVIEGHCRLKNIKEA 357
N TY +++ L K D+ LL EM K PD + Y VI+G C+ K + A
Sbjct: 461 CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ +M+S G PDD TY+ + + C + EA ++ E +++ G+ P T + +
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580
Query: 538 LWKDGNVN 561
K GN++
Sbjct: 581 FCKTGNLD 588
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/121 (34%), Positives = 67/121 (55%)
Frame = +1
Query: 199 TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEM 378
TY MIN LSK + LD LL EMV P+ +Y V+ G C+ ++ A +L++M
Sbjct: 46 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 105
Query: 379 VSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
V RGC PD +YT++ C ++ EA + + +I+ G QP+V T + V + G++
Sbjct: 106 VMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 165
Query: 559 N 561
+
Sbjct: 166 D 166
Score = 80.1 bits (196), Expect = 4e-13
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 2/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ C + A EL I+ G P++ N+L+ L + ++A + + Q
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 495
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY +I+ L K +DR +L +M+ L PD + Y +VI C+ + + EA
Sbjct: 496 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 555
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+L+ M+ G P TY +L FC G + +AL++ + ++ G PDV T S +
Sbjct: 556 NNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDW 615
Query: 538 LWKDGNV 558
L K G +
Sbjct: 616 LSKRGRL 622
Score = 77.8 bits (190), Expect = 2e-12
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
V+ G C K + A +L ++ G PD + +ISSL ++EA N +E+
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA---NNVLELML 563
Query: 184 NINYD----TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
+D TY +I+ K +LD+ E+L ++ K PD + + + I+ + ++
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+A +L+ M+ G PD TY +L FC R +A+DL+E + + G +PD +T ++ V
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/187 (21%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G C + EA L++++ G P++ N +I G+++EA + + ++
Sbjct: 261 LLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG 320
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY ++++ K + L+ MV K P+ Y +++ C+ ++ AC
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L M+ +GC P+ +Y ++ C ++ E + L E ++ PD+ T ++ + +
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Query: 541 WKDGNVN 561
K V+
Sbjct: 441 CKTYRVD 447
>gb|EXC31687.1| hypothetical protein L484_008777 [Morus notabilis]
Length = 781
Score = 108 bits (271), Expect = 8e-22
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEA------MEVKN 165
+++G C+ N A+EL E++K KG +PD N LI S +G++ EA ME
Sbjct: 431 LIQGLCLTSNHKVAMELFEEMKNKGCQPDEFTYNMLIDSNCSKGRIMEALGLLKEMESTG 490
Query: 166 CIEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKN 345
C N Y +I+ LSK ++ E+ +M ++ + + + Y +I+G C+ +
Sbjct: 491 CAR-----NVIIYNTLIDGLSKNKRIEEAEEIFDQMELQGISRNSVTYNTLIDGLCQSRR 545
Query: 346 IKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSS 525
++EA +++D+M+ G +PD TY SL FC +G I +A D+ + + G +PD+ T +
Sbjct: 546 VEEASLLMDQMIMEGLQPDKFTYNSLLTYFCREGDIKKAADIVQTMTSNGCEPDIVTYGT 605
Query: 526 AVYKLWKDGNV 558
+ L K G V
Sbjct: 606 LIGGLCKAGRV 616
Score = 103 bits (256), Expect = 4e-20
Identities = 60/186 (32%), Positives = 104/186 (55%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEID 180
++ G C + ++ ALE ++ + +G++PD+ N LIS L G+V+EA+E+ N + D
Sbjct: 326 LVNGLCKIGHVKHALETMDVMLQEGFDPDIYTYNALISGLCKLGEVDEAVEILNQMVSRD 385
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N + TEL + K + PD + +I+G C N K A
Sbjct: 386 CSPNTVTYNTIISTLCKENQVKEATELARVLTSKGILPDACTFNSLIQGLCLTSNHKVAM 445
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ +EM ++GC+PD+ TY L + C++GRI EAL L +++ G +V ++ + L
Sbjct: 446 ELFEEMKNKGCQPDEFTYNMLIDSNCSKGRIMEALGLLKEMESTGCARNVIIYNTLIDGL 505
Query: 541 WKDGNV 558
K+ +
Sbjct: 506 SKNKRI 511
Score = 81.6 bits (200), Expect = 1e-13
Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ +C I EAL L+++++ G ++ N LI L ++EEA E+ + +E+
Sbjct: 465 MLIDSNCSKGRIMEALGLLKEMESTGCARNVIIYNTLIDGLSKNKRIEEAEEIFDQMELQ 524
Query: 181 Q-NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ N TY +I+ L + ++ + L+ +M+++ L+PDK Y ++ CR +IK+A
Sbjct: 525 GISRNSVTYNTLIDGLCQSRRVEEASLLMDQMIMEGLQPDKFTYNSLLTYFCREGDIKKA 584
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEA 462
I+ M S GC+PD TY +L C GR+ A
Sbjct: 585 ADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 619
Score = 80.1 bits (196), Expect = 4e-13
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
+++G+ +I AL + E++ G N L++ G+VEEA+ ++ +E +
Sbjct: 255 IMQGYIEEGDIGGALRVKEQMVDYGCSCTNVTINVLVNGFCKVGRVEEALGFIQEMVESE 314
Query: 181 QNI-NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ + T+ ++N L K+ + E + M+ + PD Y +I G C+L + EA
Sbjct: 315 GFVPDRFTFNTLVNGLCKIGHVKHALETMDVMLQEGFDPDIYTYNALISGLCKLGEVDEA 374
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
IL++MVSR C P+ TY ++ C + ++ EA +L + G PD T +S +
Sbjct: 375 VEILNQMVSRDCSPNTVTYNTIISTLCKENQVKEATELARVLTSKGILPDACTFNSLIQG 434
Query: 538 LWKDGN 555
L N
Sbjct: 435 LCLTSN 440
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/189 (22%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGK-GWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIE 174
++++ C I AL ++E++ G PD + ++ + EG + A+ VK ++
Sbjct: 218 VLIKALCRAHQIRPALLMMEEMMPNYGLSPDEKTFTTIMQGYIEEGDIGGALRVKEQMVD 277
Query: 175 IDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKD-LRPDKLNYGVVIEGHCRLKNIK 351
+ T +++N K+ ++ + EMV + PD+ + ++ G C++ ++K
Sbjct: 278 YGCSCTNVTINVLVNGFCKVGRVEEALGFIQEMVESEGFVPDRFTFNTLVNGLCKIGHVK 337
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
A +D M+ G PD TY +L C G + EA+++ ++ P+ T ++ +
Sbjct: 338 HALETMDVMLQEGFDPDIYTYNALISGLCKLGEVDEAVEILNQMVSRDCSPNTVTYNTII 397
Query: 532 YKLWKDGNV 558
L K+ V
Sbjct: 398 STLCKENQV 406
Score = 65.5 bits (158), Expect = 1e-08
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C + + EA L++++ +G +PD N+L++ EG +++A ++ + +
Sbjct: 536 LIDGLCQSRRVEEASLLMDQMIMEGLQPDKFTYNSLLTYFCREGDIKKAADIVQTMTSNG 595
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I L K ++ LL + +K + Y VI+ + K KEA
Sbjct: 596 CEPDIVTYGTLIGGLCKAGRVEVANRLLRTIQMKGMVLTPQAYNPVIQALFKRKRTKEAT 655
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCT-QGRISEALDLWEDVIEGGYQPDVSTLS 522
+ EM+ +G PD +Y +F C G I EA+D ++ E G+ P+ S+ +
Sbjct: 656 RLFREMMEKGDPPDAISYKIVFRGLCNGGGPIGEAVDFVVEMTERGFVPEFSSFA 710
Score = 64.7 bits (156), Expect = 2e-08
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Frame = +1
Query: 142 EEAMEVKNCIEIDQNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGV 315
+E + + + +E + + DT Y I++N + N L V E ++M+ ++++PD + V
Sbjct: 159 DEILGLVDVMETEFGVKPDTHFYNILLNVFVEGNKLKLVEESHSDMLRREIKPDVSTFNV 218
Query: 316 VIEGHCRLKNIKEACIILDEMV-SRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEG 492
+I+ CR I+ A ++++EM+ + G PD+KT+T++ + +G I AL + E +++
Sbjct: 219 LIKALCRAHQIRPALLMMEEMMPNYGLSPDEKTFTTIMQGYIEEGDIGGALRVKEQMVDY 278
Query: 493 GYQPDVSTLSSAVYKLWKDGNV 558
G T++ V K G V
Sbjct: 279 GCSCTNVTINVLVNGFCKVGRV 300
>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 630
Score = 108 bits (269), Expect = 1e-21
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Frame = +1
Query: 37 TEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEA------MEVKNCIEIDQNINYD 198
T A+EL ++K KG +PD N LI SL GK++EA ME+ C N
Sbjct: 296 TMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCAR-----NVI 350
Query: 199 TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEM 378
TY +I+ K ++ E+ +M I+ L + + Y +I+G C+ + ++EA ++D+M
Sbjct: 351 TYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM 410
Query: 379 VSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
+ G KPD TY S+ FC +G I +A D+ + + G +PD+ T + + L K G V
Sbjct: 411 IMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRV 470
Score = 74.7 bits (182), Expect = 2e-11
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+LR V + ++++++KG + D I S EE + + +E++
Sbjct: 93 ILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEF 152
Query: 184 NINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ DT Y ++N L N L V + + MV K ++PD + ++I+ C+ I+ A
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
++++EM S G PD+KT+T+L F +G + A + E +++ G T++ V+
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272
Query: 538 LWKDGNV 558
K+G +
Sbjct: 273 FCKEGRI 279
Score = 65.9 bits (159), Expect = 7e-09
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C + + EA +L++++ +G +PD N++++ EG +++A ++ + +
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG 449
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I L K ++ + LL + +K + Y VI+ + K KEA
Sbjct: 450 CEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAM 509
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQ-GRISEALDLWEDVIEGGYQPDVST 516
+ EM +G PD TY +F G I EA+D ++IE G+ P+ S+
Sbjct: 510 RLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSS 562
Score = 65.5 bits (158), Expect = 1e-08
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN----- 165
I+++ C I A+ ++E++ G PD + L+ + EG ++ A VK
Sbjct: 198 ILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDA 257
Query: 166 -CIEIDQNINYDTYAI-----------MINELSKLNDLDRVTELLTEMVIKDLRPDKLNY 309
C + +N + I+E+S EL EM K +PD+ Y
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTY 317
Query: 310 GVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
++I+ C ++EA +L EM GC + TY +L FC +I EA ++++ +
Sbjct: 318 NMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI 377
Query: 490 GGYQPDVSTLSSAVYKLWKDGNV 558
G + T ++ + L K V
Sbjct: 378 QGLSRNSVTYNTLIDGLCKSRRV 400
Score = 63.5 bits (153), Expect = 4e-08
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K I EA E+ ++++ +G + N LI L +V+EA ++ + + I +
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQM-IME 413
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY M+ + D+ + +++ M PD + YG +I G C+ ++ A
Sbjct: 414 GLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 473
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVST 516
+L + +G Y + A + R EA+ L+ ++ E G PD T
Sbjct: 474 SRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526
>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 108 bits (269), Expect = 1e-21
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G C+ N A+EL E++K KG PD N LI SL G++EEA+ + +E
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ K ++ E+ EM ++ + + + Y +I+G C+ + ++EA
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
++D+M+ G KPD TY SL FC G I +A D+ + + G +PD T + + L
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606
Query: 541 WKDGNV 558
K G V
Sbjct: 607 SKAGRV 612
Score = 105 bits (263), Expect = 7e-21
Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEI-D 180
++ G C + ++ ALE+++ + +G++PD+ N+LI L G+VEEA+E+ N + + D
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ N TY +I+ L K N ++ TEL + K + PD + +I+G C N + A
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ +EM ++GC PD+ TY L + C++GR+ EAL L +++ G +V T ++ +
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLI 498
Score = 91.3 bits (225), Expect = 2e-16
Identities = 50/188 (26%), Positives = 97/188 (51%), Gaps = 2/188 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ G+C I E L I+++ +G+ PD N+L++ L G V+ A+E+ + + +
Sbjct: 286 VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD-VMLQ 344
Query: 181 QNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ + D TY +I L KL +++ E+L +M+++D P+ + Y +I C+ ++E
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A + + S+G PD T+ SL C A++L+E++ G PD T + +
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 535 KLWKDGNV 558
L G +
Sbjct: 465 SLCSRGRL 472
Score = 85.5 bits (210), Expect = 9e-15
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEG------KVEEAMEVK 162
I+++ C I A+ ++E++ G PD + L+ + EG ++ E M
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275
Query: 163 NCIEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLK 342
C + +N ++++ K ++ V + EM + RPD+ + ++ G CR+
Sbjct: 276 GCPSSNVTVN-----VLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIG 330
Query: 343 NIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLS 522
++K A ILD M+ G PD TY SL C G + EA+++ +I + P+ T +
Sbjct: 331 HVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYN 390
Query: 523 SAVYKLWKDGNV 558
+ + L K+ V
Sbjct: 391 TLISTLCKENQV 402
Score = 75.5 bits (184), Expect = 9e-12
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+++G N+ AL + E++ G N L+ EG++EE + ID+
Sbjct: 252 LMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSF-----IDE 306
Query: 184 NINYD------TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKN 345
N T+ ++N L ++ + E+L M+ + PD Y +I G C+L
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 346 IKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSS 525
++EA IL++M+ R P+ TY +L C + ++ EA +L + G PDV T +S
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 526 AVYKLWKDGN 555
+ L N
Sbjct: 427 LIQGLCLTNN 436
Score = 73.9 bits (180), Expect = 3e-11
Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Frame = +1
Query: 142 EEAMEVKNCIEIDQNINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGV 315
+EA+ V + +E + + D TY ++N L N L V + + MV + ++PD + +
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 316 VIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGG 495
+I+ CR I+ A ++++EM S G PD+KT+T+L F +G ++ AL + E ++ G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276
Query: 496 YQPDVSTLSSAVYKLWKDGNV 558
T++ V+ K+G +
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRI 297
Score = 68.2 bits (165), Expect = 2e-09
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-----KNC 168
++ G C + + EA +L++++ +G +PD N+L++ G +++A ++ N
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 169 IEIDQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNI 348
E D TY +I LSK ++ + LL + +K + Y VI+ R K
Sbjct: 592 CEPDSV----TYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRT 647
Query: 349 KEACIILDEMVSRGCKPDDKTYTSLFVAFCT-QGRISEALDLWEDVIEGGYQPDVST 516
EA + EM+ +G PD TY +F C+ G I EA+D ++ + G+ PD S+
Sbjct: 648 SEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSS 704
Score = 64.7 bits (156), Expect = 2e-08
Identities = 43/173 (24%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K I EA E+ ++++ +G ++ N LI L +VEEA ++ + + + +
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM-LME 555
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ D TY ++ + D+ + +++ M PD + YG +I G + ++ A
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVST 516
+L + +G +TY + A + R SEA+ L+ +++E G PD T
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVT 668
>gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 107 bits (266), Expect = 3e-21
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
+L G+C K I+EA+ L++++ G++P+ N LI L + K EAM + +
Sbjct: 771 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 830
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +++N L K D D LL +M L P L Y +I+G C+ K++ +A
Sbjct: 831 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ EM ++G +P+ TY+SL C GR S+A L D+IE PDV T S+ +
Sbjct: 891 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950
Query: 541 WKDGNV 558
K+G +
Sbjct: 951 VKEGKL 956
Score = 83.2 bits (204), Expect = 5e-14
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K++ +AL L ++++ KG P++ ++LIS L G+ +A + + + I++
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IER 934
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
IN D T++ +I+ K L +L EMV + + P + Y +I G C + EA
Sbjct: 935 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 994
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ + MVS+ C PD TY +L FC R+ E ++++ ++ + G + T + +
Sbjct: 995 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054
Query: 538 LWKDGN 555
L++ G+
Sbjct: 1055 LFQAGD 1060
Score = 82.8 bits (203), Expect = 6e-14
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEI 177
IV+ C ++ AL ++ K+ G+EPD +L++ +V +A+ V +EI
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ Y +I+ L K ++ + E+ K +RP+ + Y ++ G C +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+L +M+ + P+ TY++L AF G++ EA +L+E+++ PD+ T SS +
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Score = 77.8 bits (190), Expect = 2e-12
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G CM + EA ++ E + K PD+ N LI +VEE MEV E+ Q
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR--EMSQ 1038
Query: 184 NI---NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
N TY I+I L + D D E+ EMV + P+ + Y +++G C+ +++
Sbjct: 1039 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 1098
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A ++ + + +P TY + C G++ + DL+ ++ G +PDV ++ +
Sbjct: 1099 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 1158
Query: 535 KLWKDGN 555
+ G+
Sbjct: 1159 GFCRKGS 1165
Score = 76.6 bits (187), Expect = 4e-12
Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Frame = +1
Query: 19 CMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEIDQNINY 195
C K + +A + ++I+ KG P++ L++ L + +A + + I+ N
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363
Query: 196 DTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDE 375
TY+ +++ K + EL EMV + PD + Y +I G C I EA + D
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 376 MVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGN 555
MVS+GC D +Y +L FC R+ + + L+ ++ + G + T ++ + ++ G+
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 556 VN 561
V+
Sbjct: 484 VD 485
Score = 73.9 bits (180), Expect = 3e-11
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C+ I EA ++ + + KG D+ N LI+ +VE+ M++ E+ Q
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR--EMSQ 461
Query: 184 N---INYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
N TY +I + D+D+ E ++M + PD Y +++ G C +++
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A +I ++M R D TYT++ C G++ EA L+ + G +PD+ T ++ +
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581
Query: 535 KLWKDG 552
L G
Sbjct: 582 GLCTKG 587
Score = 71.2 bits (173), Expect = 2e-10
Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 2/175 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K + + ++L ++ +G + N LI G V++A E + ++
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF- 497
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
I+ D TY I++ L +L++ + +M +++ D + Y VI G C+ ++EA
Sbjct: 498 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLS 522
+ + +G KPD TYT++ CT+G + E L+ + + G + TLS
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 612
Score = 71.2 bits (173), Expect = 2e-10
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+++G C K + E +E+ ++ +G + N LI L G + A E+ K +
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ L K L++ + + + P Y ++IEG C+ +++
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ + +G KPD Y ++ FC +G EA L++++ E G P+ ++ +
Sbjct: 1136 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 1195
Query: 541 WKDGNVNA 564
+DG+ A
Sbjct: 1196 LRDGDREA 1203
Score = 67.4 bits (163), Expect = 3e-09
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
++ G C ++A L+ + K P++ + L+ + + GKV EA E+ + + +
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ + TY+ +IN L + +D ++ MV K D ++Y +I G C+ K +++
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 453
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ EM RG + TY +L F G + +A + + + G PD+ T + + L
Sbjct: 454 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 513
Query: 541 WKDGNV 558
+G +
Sbjct: 514 CDNGEL 519
Score = 67.4 bits (163), Expect = 3e-09
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
I+++G + A E+ +++ G P++ N L+ L GK+E+AM V ++
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 181 Q-NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ TY IMI + K ++ +L + +K ++PD + Y +I G CR + +EA
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ EM G P+ Y +L A G + +L +++ G+ D ST+ V
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 1228
Query: 538 LWKDGNVN 561
+ DG ++
Sbjct: 1229 MLHDGRLD 1236
Score = 66.6 bits (161), Expect = 4e-09
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Frame = +1
Query: 34 ITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDTYA-- 207
+ +A++L + P + N L+S+++ K + + + +E+ I D Y
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEV-LGIRNDLYTFN 227
Query: 208 IMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSR 387
I+IN + +L +M+ PD++ G ++ G CR + +A ++D+MV
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 388 GCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL-----WKD 549
G KPD Y ++ + C R+++A D ++++ G +P+V T ++ V L W D
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Score = 65.5 bits (158), Expect = 1e-08
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 8/186 (4%)
Frame = +1
Query: 25 VKN--ITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV------KNCIEID 180
VKN + EA EL E++ +PD+ ++LI+ L + +++EA ++ K C+
Sbjct: 374 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA-- 431
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
++Y+T +IN K ++ +L EM + L + + Y +I+G + ++ +A
Sbjct: 432 DVVSYNT---LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 488
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+M G PD TY L C G + +AL ++ED+ + D+ T ++ + +
Sbjct: 489 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548
Query: 541 WKDGNV 558
K G V
Sbjct: 549 CKTGKV 554
Score = 64.7 bits (156), Expect = 2e-08
Identities = 36/117 (30%), Positives = 61/117 (52%)
Frame = +1
Query: 211 MINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRG 390
+++ + KL D V L +M + +R D + +VI C + A IL +M+ G
Sbjct: 194 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLG 253
Query: 391 CKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVN 561
+PD T SL FC + R+S+A+ L + ++E GY+PD+ ++ + L K VN
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 310
Score = 63.2 bits (152), Expect = 5e-08
Identities = 36/128 (28%), Positives = 64/128 (50%)
Frame = +1
Query: 190 NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIIL 369
N+ TY+I+IN + + L +L +M+ P+ + ++ G+C K I EA ++
Sbjct: 729 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 788
Query: 370 DEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKD 549
D+M G +P+ T+ +L + SEA+ L + ++ G QPD+ T V L K
Sbjct: 789 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 848
Query: 550 GNVNAECN 573
G+ + N
Sbjct: 849 GDTDLAFN 856
Score = 62.4 bits (150), Expect = 8e-08
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
Frame = +1
Query: 25 VKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKN-CIEIDQNINYDT 201
+K + L +K++ G D+ N +I+ +V A+ + +++ + T
Sbjct: 201 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 260
Query: 202 YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMV 381
++N + N + L+ +MV +PD + Y +I+ C+ K + +A E+
Sbjct: 261 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 320
Query: 382 SRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNV 558
+G +P+ TYT+L C R S+A L D+I+ P+V T S+ + K+G V
Sbjct: 321 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 379
Score = 58.9 bits (141), Expect = 9e-07
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Frame = +1
Query: 40 EALELIEKIKGK-GWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDTYAIMI 216
+AL L+ GK ++ + N +S L ++ V E+ I + ++
Sbjct: 646 KALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSK---LL 702
Query: 217 NELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCK 396
+ ++K+N D V L +M + + Y ++I CR + A +L +M+ G +
Sbjct: 703 SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 762
Query: 397 PDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLW 543
P+ T +SL +C RISEA+ L + + GYQP+ T ++ ++ L+
Sbjct: 763 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 811
>ref|NP_176454.1| pentatricopeptide repeat protein RPF2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| pentatricopeptide repeat
protein RPF2 [Arabidopsis thaliana]
Length = 630
Score = 107 bits (266), Expect = 3e-21
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAME-VKNCIEID 180
+L G+C K I+EA+ L++++ G++P+ N LI L + K EAM + +
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +++N L K D D LL +M L P L Y +I+G C+ K++ +A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ EM ++G +P+ TY+SL C GR S+A L D+IE PDV T S+ +
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 541 WKDGNV 558
K+G +
Sbjct: 337 VKEGKL 342
Score = 83.2 bits (204), Expect = 5e-14
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G C K++ +AL L ++++ KG P++ ++LIS L G+ +A + + + I++
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM-IER 320
Query: 184 NINYD--TYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
IN D T++ +I+ K L +L EMV + + P + Y +I G C + EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ + MVS+ C PD TY +L FC R+ E ++++ ++ + G + T + +
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 538 LWKDGN 555
L++ G+
Sbjct: 441 LFQAGD 446
Score = 77.8 bits (190), Expect = 2e-12
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
++ G CM + EA ++ E + K PD+ N LI +VEE MEV E+ Q
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR--EMSQ 424
Query: 184 NI---NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
N TY I+I L + D D E+ EMV + P+ + Y +++G C+ +++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A ++ + + +P TY + C G++ + DL+ ++ G +PDV ++ +
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 535 KLWKDGN 555
+ G+
Sbjct: 545 GFCRKGS 551
Score = 71.2 bits (173), Expect = 2e-10
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+++G C K + E +E+ ++ +G + N LI L G + A E+ K +
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
N TY +++ L K L++ + + + P Y ++IEG C+ +++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+ + +G KPD Y ++ FC +G EA L++++ E G P+ ++ +
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRAR 581
Query: 541 WKDGNVNA 564
+DG+ A
Sbjct: 582 LRDGDREA 589
Score = 67.4 bits (163), Expect = 3e-09
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
I+++G + A E+ +++ G P++ N L+ L GK+E+AM V ++
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 181 Q-NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
+ TY IMI + K ++ +L + +K ++PD + Y +I G CR + +EA
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+ EM G P+ Y +L A G + +L +++ G+ D ST+ V
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 614
Query: 538 LWKDGNVN 561
+ DG ++
Sbjct: 615 MLHDGRLD 622
Score = 63.2 bits (152), Expect = 5e-08
Identities = 36/128 (28%), Positives = 64/128 (50%)
Frame = +1
Query: 190 NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIIL 369
N+ TY+I+IN + + L +L +M+ P+ + ++ G+C K I EA ++
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 370 DEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKD 549
D+M G +P+ T+ +L + SEA+ L + ++ G QPD+ T V L K
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 550 GNVNAECN 573
G+ + N
Sbjct: 235 GDTDLAFN 242
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/114 (27%), Positives = 61/114 (53%)
Frame = +1
Query: 202 YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMV 381
++ +++ ++K+N D V L +M + + Y ++I CR + A +L +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 382 SRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKLW 543
G +P+ T +SL +C RISEA+ L + + GYQP+ T ++ ++ L+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
>ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein
SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 107 bits (266), Expect = 3e-21
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEI 177
+++ G C +++A+EL+E +K +G PD+ L+ L E KV A EV + ++
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
N TY +++ L + + L+ +M + P+ + YG +I+G C++ +K+A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
C +L +M+ +G PD Y L C ++ E++ L + GG +PDV T SS +Y
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 538 LWKDGNVNAEC 570
L + ++ C
Sbjct: 298 LCRSNRLDEAC 308
Score = 98.6 bits (244), Expect = 1e-18
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G C + +++AL L+ + +G P++ LI L G+V++A + + I+
Sbjct: 189 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 248
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ Y ++IN L K + +D LL V ++PD + Y VI G CR + EAC
Sbjct: 249 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L + SRGC PD Y++L C G++ EA DL+E + G DV T S+ + L
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368
Query: 541 WKDGNVN 561
K G V+
Sbjct: 369 CKAGRVD 375
Score = 90.5 bits (223), Expect = 3e-16
Identities = 52/161 (32%), Positives = 83/161 (51%)
Frame = +1
Query: 88 DMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQNINYDTYAIMINELSKLNDLDRVTELLT 267
D+ N L++ L GK+E A+E ++ + N TY+++I+ L K N + + ELL
Sbjct: 78 DVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 137
Query: 268 EMVIKDLRPDKLNYGVVIEGHCRLKNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQG 447
M + PD + Y ++++G C+ + A +L EM+ GC P+ TY SL C
Sbjct: 138 SMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRAR 197
Query: 448 RISEALDLWEDVIEGGYQPDVSTLSSAVYKLWKDGNVNAEC 570
R+S+AL L D+ G P+V T + + L K G V C
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Score = 87.8 bits (216), Expect = 2e-15
Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
V+ G C + EA L+ +K +G PD+ + LI L GKV+EA ++ + D
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Query: 184 -NINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ + TY+ +I+ L K +D LL MV P + Y +I+G C L ++ EA
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 413
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRI-SEALDLWEDVIEGGYQPDVSTLSSAVYK 537
+++EM C P TY L C R+ S ALD ++++I+ G PD T S +
Sbjct: 414 ELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEG 473
Query: 538 LWKDGNVN 561
L K +++
Sbjct: 474 LKKSKDLH 481
Score = 75.5 bits (184), Expect = 9e-12
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
++ G C V + +A ++ + KG PD+ N LI+ L +V+E++ + + +
Sbjct: 224 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 283
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY+ +I L + N LD LL + + PD + Y +I+G C+ + EA
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ + M GC D TY++L C GR+ EA L ++ G P T +S +
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 400
Score = 68.6 bits (166), Expect = 1e-09
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ G C + E++ L+ + G +PD+ +++I L +++EA + ++
Sbjct: 258 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK-S 316
Query: 181 QNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ D Y+ +I+ L K +D +L M D + Y +I+G C+ + E
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A ++L MV G P TY SL C + EA++L E++ P T + ++
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436
Query: 535 KLWKDGNVNA 564
+ + V++
Sbjct: 437 GMCRMERVDS 446
>ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein
SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 107 bits (266), Expect = 3e-21
Identities = 54/191 (28%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEI 177
+++ G C +++A+EL+E +K +G PD+ L+ L E KV A EV + ++
Sbjct: 196 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 255
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
N TY +++ L + + L+ +M + P+ + YG +I+G C++ +K+A
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315
Query: 358 CIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYK 537
C +L +M+ +G PD Y L C ++ E++ L + GG +PDV T SS +Y
Sbjct: 316 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 375
Query: 538 LWKDGNVNAEC 570
L + ++ C
Sbjct: 376 LCRSNRLDEAC 386
Score = 98.6 bits (244), Expect = 1e-18
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
+L G C + +++AL L+ + +G P++ LI L G+V++A + + I+
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ Y ++IN L K + +D LL V ++PD + Y VI G CR + EAC
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 386
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVYKL 540
+L + SRGC PD Y++L C G++ EA DL+E + G DV T S+ + L
Sbjct: 387 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGL 446
Query: 541 WKDGNVN 561
K G V+
Sbjct: 447 CKAGRVD 453
Score = 96.3 bits (238), Expect = 5e-18
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV------KN 165
++ G C A EL E +K P M N L+ L GK+E AM + +
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179
Query: 166 CIEIDQNI--NYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRL 339
++D N TY+++I+ L K N + + ELL M + PD + Y ++++G C+
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239
Query: 340 KNIKEACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTL 519
+ A +L EM+ GC P+ TY SL C R+S+AL L D+ G P+V T
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 520 SSAVYKLWKDGNVNAEC 570
+ + L K G V C
Sbjct: 300 GTLIDGLCKVGRVKDAC 316
Score = 93.6 bits (231), Expect = 3e-17
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 6/192 (3%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEA-MEVKNCIEID 180
++ G C + EA +L E + G G + D+ + LI L G+V+EA + + + +
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY +I L LN LD EL+ EM + P + Y ++I G CR++ + A
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526
Query: 361 IILDEMVSR-----GCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSS 525
++L++ +R G D Y+SL C GR++EALD ++++I+ G PD T S
Sbjct: 527 VLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586
Query: 526 AVYKLWKDGNVN 561
+ L K +++
Sbjct: 587 LLEGLKKSKDLH 598
Score = 77.4 bits (189), Expect = 2e-12
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCI-EI 177
I++ G C K +AL ++G G D L+S L E ++++A+ + + + +
Sbjct: 49 ILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH 108
Query: 178 DQNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEA 357
N TY +I+ L K N+ DR EL M + P + Y +++G R ++ A
Sbjct: 109 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 168
Query: 358 CIILDEMVSR-------GCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVST 516
+ EM+ R C P+ TY+ L C R+S+A++L E + G PDV T
Sbjct: 169 MALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVIT 228
Query: 517 LSSAVYKLWKDGNVNA 564
+ V L K+ V A
Sbjct: 229 YTILVDGLCKESKVAA 244
Score = 75.5 bits (184), Expect = 9e-12
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEV-KNCIEID 180
++ G C V + +A ++ + KG PD+ N LI+ L +V+E++ + + +
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361
Query: 181 QNINYDTYAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKEAC 360
+ TY+ +I L + N LD LL + + PD + Y +I+G C+ + EA
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421
Query: 361 IILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAV 531
+ + M GC D TY++L C GR+ EA L ++ G P T +S +
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLI 478
Score = 68.6 bits (166), Expect = 1e-09
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Frame = +1
Query: 1 IVLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEID 180
+++ G C + E++ L+ + G +PD+ +++I L +++EA + ++
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK-S 394
Query: 181 QNINYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIKE 354
+ D Y+ +I+ L K +D +L M D + Y +I+G C+ + E
Sbjct: 395 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDE 454
Query: 355 ACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIEGGYQPDVSTLSSAVY 534
A ++L MV G P TY SL C + EA++L E++ P T + ++
Sbjct: 455 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 514
Query: 535 KLWKDGNVNA 564
+ + V++
Sbjct: 515 GMCRMERVDS 524
Score = 59.7 bits (143), Expect = 5e-07
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Frame = +1
Query: 4 VLRGHCMVKNITEALELIEKIKGKGWEPDMEPCNNLISSLMIEGKVEEAMEVKNCIEIDQ 183
+LRG C I +A ++++ K P++ C+ LI L K + +++ C Q
Sbjct: 15 LLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLC---KAKRSIDALRCFRAMQ 71
Query: 184 N--INYDT--YAIMINELSKLNDLDRVTELLTEMVIKDLRPDKLNYGVVIEGHCRLKNIK 351
I DT Y +++ L K LD+ +L EM P+ + Y +I+G C+
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 352 EACIILDEMVSRGCKPDDKTYTSLFVAFCTQGRISEALDLWEDVIE 489
A + + M S C P TY +L G++ A+ L++++++
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLD 177