BLASTX nr result

ID: Akebia23_contig00016137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00016137
         (1210 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352592.1| PREDICTED: F-box protein SKIP27-like isoform...    60   2e-06
ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform...    60   2e-06

>ref|XP_006352592.1| PREDICTED: F-box protein SKIP27-like isoform X1 [Solanum tuberosum]
           gi|565372011|ref|XP_006352593.1| PREDICTED: F-box
           protein SKIP27-like isoform X2 [Solanum tuberosum]
           gi|565372013|ref|XP_006352594.1| PREDICTED: F-box
           protein SKIP27-like isoform X3 [Solanum tuberosum]
          Length = 177

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +1

Query: 520 TLIAKNWHFAFCTPSSKTSCLRPFSDLEDESK---LDIKDAPKQQRRNRSQQMSGKRLAD 690
           TL+AK WHF + TP+ KT   +  +D+++ S+   +++ +AP+Q +  R++ +S K+LAD
Sbjct: 93  TLVAKRWHFEYSTPT-KTLGFKNATDIDNWSESNNVEVPNAPRQSKFPRAR-LSRKKLAD 150

Query: 691 ITIALFHSPEGEQWSRRE 744
           I++ALF S   E W RRE
Sbjct: 151 ISVALFTSDSEENWPRRE 168


>ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform 1 [Solanum
           lycopersicum] gi|460405832|ref|XP_004248378.1|
           PREDICTED: F-box protein SKIP27-like isoform 2 [Solanum
           lycopersicum]
          Length = 177

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = +1

Query: 520 TLIAKNWHFAFCTPSSKTSCLRPFSDLED---ESKLDIKDAPKQQRRNRSQQMSGKRLAD 690
           TL+AK WHF + TP  KT   +  +D++D    + +++ +AP+Q +  R++ +S K+LAD
Sbjct: 93  TLVAKRWHFEYSTPK-KTLGFKNATDMDDWNESNDVELPNAPRQAKFPRTR-LSQKKLAD 150

Query: 691 ITIALFHSPEGEQWSRRE 744
           I++ALF S   E W RRE
Sbjct: 151 ISVALFTSDSEENWPRRE 168


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