BLASTX nr result

ID: Akebia23_contig00016102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00016102
         (405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Popu...    56   6e-06
ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...    55   8e-06

>ref|XP_006382625.1| hypothetical protein POPTR_0005s03900g [Populus trichocarpa]
           gi|550337989|gb|ERP60422.1| hypothetical protein
           POPTR_0005s03900g [Populus trichocarpa]
          Length = 385

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 314 GLDPSMIQTFPTFIYSDVKGLKIGKGALEC 403
           GLDP++I+TFPT IYS VKGLKIGKGALEC
Sbjct: 100 GLDPAVIETFPTLIYSVVKGLKIGKGALEC 129


>ref|XP_004289484.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Fragaria vesca
           subsp. vesca]
          Length = 377

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/57 (47%), Positives = 32/57 (56%)
 Frame = +2

Query: 233 QCAANHPQLGGXXXXXXXXXXXXXXXXGLDPSMIQTFPTFIYSDVKGLKIGKGALEC 403
           +CA  H    G                GLDP++I+ FP F+YSDVK LKIGKGALEC
Sbjct: 67  RCAETHIANAGGSLGAAGAIGVAARRRGLDPAVIEKFPMFVYSDVKDLKIGKGALEC 123


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