BLASTX nr result
ID: Akebia23_contig00014811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00014811
(659 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prun... 340 2e-91
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam... 328 7e-88
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis] 326 5e-87
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi... 325 8e-87
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps... 323 4e-86
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 322 7e-86
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 321 1e-85
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 320 2e-85
ref|XP_006408151.1| hypothetical protein EUTSA_v10022408mg, part... 319 6e-85
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 318 9e-85
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi... 317 3e-84
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 314 1e-83
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi... 309 6e-82
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi... 308 1e-81
gb|EYU19809.1| hypothetical protein MIMGU_mgv1a005320mg [Mimulus... 307 2e-81
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr... 306 5e-81
ref|XP_006375855.1| pentatricopeptide repeat-containing family p... 305 6e-81
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi... 301 1e-79
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 299 6e-79
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu... 298 8e-79
>ref|XP_007205118.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
gi|462400760|gb|EMJ06317.1| hypothetical protein
PRUPE_ppa004835mg [Prunus persica]
Length = 489
Score = 340 bits (872), Expect = 2e-91
Identities = 158/206 (76%), Positives = 192/206 (93%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
++ILE +GEPD+FSYNA+ISGFCK N+I+SANKV++RMR+QG SPDVVTYNI+IGSLCSR
Sbjct: 33 MQILEKYGEPDLFSYNALISGFCKANRIESANKVLDRMRSQGFSPDVVTYNIMIGSLCSR 92
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+LGLA+K++DQL++DNC PTVITYTILIEATI +GGI+EAMKLLDEMLS+GL+PDMYTY
Sbjct: 93 GKLGLALKVMDQLVKDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTY 152
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NA+ RGMC+EG +DRAF+FV++L S GC P+VISYN+LLRALLN+G+W +GE+LVT M S
Sbjct: 153 NAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMCS 212
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
RGCEPNVVTYSILIS+LC DGKVEDA
Sbjct: 213 RGCEPNVVTYSILISTLCRDGKVEDA 238
Score = 165 bits (418), Expect = 1e-38
Identities = 84/240 (35%), Positives = 134/240 (55%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+++YNAVI G C+ +D A + V + ++GC P+V++YNIL+ +L +RG
Sbjct: 139 EMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKGCPPNVISYNILLRALLNRG 198
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ + C P V+TY+ILI +G + +A+ +L M KGL PD Y+Y+
Sbjct: 199 KWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKIMKKKGLTPDAYSYD 258
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ CKEG +D A EF+ + S GC PD+++YN +L AL G+
Sbjct: 259 PLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCKSGKADQALQIFENLGEV 318
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
WN G+R +V+EM+ +G +P+ +TY+ LIS LC DG V++A
Sbjct: 319 GCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEA 378
Score = 147 bits (372), Expect = 2e-33
Identities = 70/198 (35%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L+I++ G PD +SY+ ++S FCK ++D A + ++ M + GC PD+V YN ++ +LC
Sbjct: 242 LKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALCK 301
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ + L E C P V +Y + A G A+ ++ EM+ KG++PD T
Sbjct: 302 SGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEIT 361
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C++G VD A + ++ + G +P VISYN++L L R D +++TEM+
Sbjct: 362 YNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMV 421
Query: 578 SRGCEPNVVTYSILISSL 631
+GC PN TY +LI +
Sbjct: 422 EKGCRPNETTYILLIEGI 439
Score = 74.7 bits (182), Expect = 2e-11
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
L+I E+ GE P+V SYN + S A +V+ M +G PD +TYN LI
Sbjct: 309 LQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISC 368
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + PTVI+Y I++ + +A+++L EM+ KG RP+
Sbjct: 369 LCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPN 428
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNLPSM 478
TY + G+ G A E ++ S+
Sbjct: 429 ETTYILLIEGIGFAGWRAEAMELANSVFSL 458
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/96 (33%), Positives = 53/96 (55%)
Frame = +2
Query: 362 MLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR 541
M++KG +PD+ + +G +++A ++ L G EPD+ SYN L+ R
Sbjct: 1 MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYG-EPDLFSYNALISGFCKANR 59
Query: 542 WNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKV 649
+++ M S+G P+VVTY+I+I SLC GK+
Sbjct: 60 IESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKL 95
>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 586
Score = 328 bits (842), Expect = 7e-88
Identities = 153/206 (74%), Positives = 189/206 (91%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE +GEPDVF+YNA+ISGFCK+N++D ANKV++RMR++G SPDVVTYNI+IGS CSR
Sbjct: 130 IEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSR 189
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L A K+++QLL+DNC P+VITYTILIEAT+ +G INEAMKLLDEMLSKGLRPDM+TY
Sbjct: 190 GKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDEMLSKGLRPDMFTY 249
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMCK+G V+RAF+FV++L + GC+PDVISYN+LLR LLNQG+W +GE+LVTEM+S
Sbjct: 250 NAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGKWAEGEKLVTEMVS 309
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
RGCEPNVVTYSILISSLC +GK+E+A
Sbjct: 310 RGCEPNVVTYSILISSLCREGKLEEA 335
Score = 165 bits (417), Expect = 1e-38
Identities = 83/240 (34%), Positives = 134/240 (55%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L PD+F+YNA+I G CK ++ A K V ++A+GC PDV++YNIL+ L ++G
Sbjct: 236 EMLSKGLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQG 295
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ +++ C P V+TY+ILI + EG + EA+ +L M +GL PD Y+Y+
Sbjct: 296 KWAEGEKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYD 355
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ CKEG +D A EF+ + S GC PD+++YN +L L G+
Sbjct: 356 PLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREV 415
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ +++EM+S+ P+ +TY+ LIS LC DG V++A
Sbjct: 416 GCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEA 475
Score = 147 bits (370), Expect = 4e-33
Identities = 70/198 (35%), Positives = 119/198 (60%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +IS FCK ++D A + ++ M + GC PD+V YN ++ +LC
Sbjct: 339 LKMMKERGLTPDAYSYDPLISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCK 398
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ ++L E C P V +Y + A + G +A++++ EMLSK + PD T
Sbjct: 399 NGKAEQALEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEIT 458
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C++G VD A E + ++ G P VISYN++L L R ND ++ M+
Sbjct: 459 YNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMV 518
Query: 578 SRGCEPNVVTYSILISSL 631
+ C+PN TY +LI +
Sbjct: 519 DKRCQPNETTYILLIEGI 536
Score = 73.9 bits (180), Expect = 4e-11
Identities = 39/119 (32%), Positives = 63/119 (52%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMG 481
L+ + G NEA L+ M+ KG +PD+ + +G V++A ++ L G
Sbjct: 78 LLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKGFFNGRNVEKATRVIEILEKYG 137
Query: 482 CEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
EPDV +YN ++ R + +++ M SRG P+VVTY+I+I S C GK++ A
Sbjct: 138 -EPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDVVTYNIMIGSFCSRGKLDSA 195
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/107 (32%), Positives = 60/107 (56%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L PD +YN++IS C+ +D A +++ M G P V++YNI++ LC
Sbjct: 446 EMLSKRIGPDEITYNSLISCLCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVH 505
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEM 364
R+ A+++L +++ C P TY +LIE G +EAM+L + +
Sbjct: 506 RINDAIEVLAAMVDKRCQPNETTYILLIEGIGFAGWRSEAMELANAL 552
Score = 66.2 bits (160), Expect = 8e-09
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
LEI E E P+V SYN + S A ++++ M ++ PD +TYN LI
Sbjct: 406 LEIFEKLREVGCPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISC 465
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+++L + PTVI+Y I++ IN+A+++L M+ K +P+
Sbjct: 466 LCRDGMVDEAIELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPN 525
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNL 469
TY + G+ G A E L
Sbjct: 526 ETTYILLIEGIGFAGWRSEAMELANAL 552
>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
Length = 587
Score = 326 bits (835), Expect = 5e-87
Identities = 147/206 (71%), Positives = 189/206 (91%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE HGEPD+FSYNA+ISGFCK N+++ ANKV++RMR QG SPD +TYNI+IGSLCSR
Sbjct: 131 MEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSR 190
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G++ +A K+LD+LL DNC P+VITYTILIEATI+EGG+++AM++L+EMLS+GL PDM+TY
Sbjct: 191 GKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTY 250
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMC+EG +DRAFEFV++L + GC P+VISYN+LLRALLN+G+W+DGE+++++M+S
Sbjct: 251 NAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVS 310
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
RGCEPNVVTYSILIS+LC DGKVEDA
Sbjct: 311 RGCEPNVVTYSILISTLCRDGKVEDA 336
Score = 162 bits (409), Expect = 1e-37
Identities = 81/232 (34%), Positives = 128/232 (55%), Gaps = 35/232 (15%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+F+YNA++ G C+ +D A + V + A+GCSP+V++YNIL+ +L +RG+ K+
Sbjct: 245 PDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKI 304
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
L ++ C P V+TY+ILI +G + +A+ +L M KG+ PD Y+Y+ + CK
Sbjct: 305 LSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCK 364
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR---------------------- 541
EG +D A EF+ + S G PD+++YN +L AL G
Sbjct: 365 EGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEVGCPPTVSS 424
Query: 542 --------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
WN GER +++EM+S+ P+ +TY+ LIS LC +G V +A
Sbjct: 425 YNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEA 476
Score = 137 bits (345), Expect = 3e-30
Identities = 66/188 (35%), Positives = 112/188 (59%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD +SY+ +IS FCK ++D A + ++ M + G PD+V YN ++ +LC G A+++
Sbjct: 350 PDAYSYDPLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEI 409
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
++L E C PTV +Y + A G +A++++ EM+SK + PD TYN++ +C+
Sbjct: 410 FEKLGEVGCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCR 469
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVT 607
EG V+ A + ++ + G + VISYN++L L R +D L+ M+ +GC PN T
Sbjct: 470 EGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETT 529
Query: 608 YSILISSL 631
Y++LI +
Sbjct: 530 YTLLIEGI 537
Score = 131 bits (330), Expect = 2e-28
Identities = 63/205 (30%), Positives = 112/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L + +P V +Y +I +D A +V+ M ++G PD+ TYN ++ +C G
Sbjct: 202 ELLRDNCKPSVITYTILIEATISEGGVDKAMEVLEEMLSRGLLPDMFTYNAIVRGMCREG 261
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
L A + + L C P VI+Y IL+ A + G ++ K+L +M+S+G P++ TY+
Sbjct: 262 MLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRGKWSDGEKILSDMVSRGCEPNVVTYS 321
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G V+ A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 322 ILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYDPLISAFCKEGRLDLAIEFMDYMISD 381
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
G P++V Y+ ++++LC +G + A
Sbjct: 382 GSLPDIVNYNTILAALCKNGNADHA 406
Score = 72.4 bits (176), Expect = 1e-10
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 34/153 (22%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGLR--------------------------------- 382
+I + G NEA+ L+ M+SKG +
Sbjct: 79 VINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMRGFFNSRNIPKAIRVMEILEKHG 138
Query: 383 -PDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGER 559
PD+++YNA+ G CK V+ A + + + G PD I+YN+++ +L ++G+ + +
Sbjct: 139 EPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPDTITYNIMIGSLCSRGKVDMAFK 198
Query: 560 LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
++ E++ C+P+V+TY+ILI + +G V+ A
Sbjct: 199 VLDELLRDNCKPSVITYTILIEATISEGGVDKA 231
Score = 63.9 bits (154), Expect = 4e-08
Identities = 35/103 (33%), Positives = 56/103 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++ PD +YN++IS C+ ++ A ++ M A G V++YNI++ LC
Sbjct: 447 EMVSKRINPDEITYNSLISCLCREGMVNEAIGLLIDMEAGGFKLSVISYNIVLLGLCKAR 506
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKL 352
R+ A+++L ++E C P TYT+LIE G EAM L
Sbjct: 507 RIDDAIELLAAMVEKGCRPNETTYTLLIEGIGFAGWRVEAMGL 549
>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 586
Score = 325 bits (833), Expect = 8e-87
Identities = 151/205 (73%), Positives = 184/205 (89%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
++ILE +GEPD+F+YNA+ISGFCK N+I+SANKV++RM++QG PDVVTYNI+IGSLCSR
Sbjct: 130 MQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNIMIGSLCSR 189
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+LGLA++++D+L+ DNC PTVITYTILIEA I +GGINEAMKLLDEMLS+GL+PDMYTY
Sbjct: 190 GKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDMYTY 249
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMC+EG +DRAFEFVK + GC P+VISYN+LLRALLN+G+W +GE LV M +
Sbjct: 250 NAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGKWEEGENLVANMCA 309
Query: 581 RGCEPNVVTYSILISSLCHDGKVED 655
RGCEPNVVTYSILIS+LC DGKVED
Sbjct: 310 RGCEPNVVTYSILISTLCRDGKVED 334
Score = 157 bits (398), Expect = 2e-36
Identities = 82/240 (34%), Positives = 130/240 (54%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+++YNA++ G C+ +D A + V A+GC+P+V++YNIL+ +L +RG
Sbjct: 236 EMLSRGLKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRG 295
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ ++ + C P V+TY+ILI +G + + M +L M KGL PD Y+Y+
Sbjct: 296 KWEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYD 355
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ CKEG +D A E + + S GC PD+++YN +L AL G
Sbjct: 356 PLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEV 415
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
WN G+R +V++M+S+G EP+ +TY+ LIS LC DG V +A
Sbjct: 416 GCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEA 475
Score = 138 bits (348), Expect = 1e-30
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L+I++ G PD +SY+ +IS FCK ++D A ++++ M + GC PD+V YN ++ +LC
Sbjct: 339 LKIMKEKGLTPDAYSYDPLISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCK 398
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G A+++ + L E C P V +Y + A G A+ ++ +M+SKG+ PD T
Sbjct: 399 NGSADQALEIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEIT 458
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C++G V+ A + ++ + G +P VI+YN++L L R D + T M+
Sbjct: 459 YNSLISCLCRDGMVNEAIGLLVDMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMV 518
Query: 578 SRGCEPNVVTYSILISSL 631
+GC PN TY +LI +
Sbjct: 519 EKGCRPNETTYILLIEGI 536
Score = 110 bits (276), Expect = 3e-22
Identities = 58/189 (30%), Positives = 101/189 (53%)
Frame = +2
Query: 92 VISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKMLDQLLEDN 271
V++ CK Q + A + M +G PDV+ LI + + A++++ Q+LE
Sbjct: 78 VLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVM-QILEQY 136
Query: 272 CHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAF 451
P + Y LI I A K+LD M S+G +PD+ TYN + +C G + A
Sbjct: 137 GEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDVVTYNIMIGSLCSRGKLGLAL 196
Query: 452 EFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSL 631
+ + L C+P VI+Y +L+ A++ G N+ +L+ EM+SRG +P++ TY+ ++ +
Sbjct: 197 QVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDEMLSRGLKPDMYTYNAIVRGM 256
Query: 632 CHDGKVEDA 658
C +G ++ A
Sbjct: 257 CREGMLDRA 265
Score = 75.9 bits (185), Expect = 1e-11
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
LEI E+ GE P+V SYN + S A +V+ M ++G PD +TYN LI
Sbjct: 406 LEIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISC 465
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + PTVITY I++ I +A+++ M+ KG RP+
Sbjct: 466 LCRDGMVNEAIGLLVDMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPN 525
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNLPSMG--CE 487
TY + G+ G A E K++ S+ CE
Sbjct: 526 ETTYILLIEGIGFAGWRAEAMELAKSVYSLSAICE 560
>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
gi|482565317|gb|EOA29506.1| hypothetical protein
CARUB_v10013258mg [Capsella rubella]
Length = 607
Score = 323 bits (827), Expect = 4e-86
Identities = 149/206 (72%), Positives = 184/206 (89%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE G+PDVF+YNA+I+GFCK+N+ID A +V++RMR++G SPD VTYNI+IGSLCSR
Sbjct: 151 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIMIGSLCSR 210
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+K+LDQLL DNC PTVITYTILIEAT+ EGG++EA+KLLDEMLS+GL+PDM+TY
Sbjct: 211 GKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 270
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N I RGMCKEG VDRAFE V+NL GCEPDVISYN+LLRALLNQG+W +GE+L+T+M S
Sbjct: 271 NTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 330
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
C+PNVVTYSILI++LC DGK+E+A
Sbjct: 331 EKCDPNVVTYSILITTLCRDGKIEEA 356
Score = 168 bits (425), Expect = 2e-39
Identities = 81/240 (33%), Positives = 136/240 (56%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+F+YN +I G CK +D A ++V + +GC PDV++YNIL+ +L ++G
Sbjct: 257 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQG 316
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ ++ + C P V+TY+ILI +G I EA+ LL M KGL PD Y+Y+
Sbjct: 317 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYD 376
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF++ + S GC PD+++YN +L L G+
Sbjct: 377 PLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 436
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ +++EM+S+G +P+ +TY+ +IS LC +G V++A
Sbjct: 437 GCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEA 496
Score = 139 bits (349), Expect = 1e-30
Identities = 64/198 (32%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +I+ FC+ ++D A + + M + GC PD+V YN ++ +LC
Sbjct: 360 LKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCK 419
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ +L E C P +Y + A + G A+ ++ EM+S+G+ PD T
Sbjct: 420 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEIT 479
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG VD AF+ + ++ S P V++YN++L R D ++ M+
Sbjct: 480 YNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMV 539
Query: 578 SRGCEPNVVTYSILISSL 631
GC PN TY++LI +
Sbjct: 540 GNGCRPNESTYTVLIEGI 557
Score = 134 bits (338), Expect = 2e-29
Identities = 64/205 (31%), Positives = 114/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I +D A K+++ M ++G PD+ TYN +I +C G
Sbjct: 222 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 281
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +M+ L C P VI+Y IL+ A + +G E KL+ +M S+ P++ TY+
Sbjct: 282 MVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 341
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G ++ A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 342 ILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFCREGRLDLAIEFLETMISD 401
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +GK + A
Sbjct: 402 GCLPDIVNYNTVLATLCKNGKADQA 426
Score = 100 bits (250), Expect = 3e-19
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE + S G PD+ +YN V++ CK + D A ++ ++ GCSP+ +YN + +L S
Sbjct: 395 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 454
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G A+ M+ +++ P ITY +I EG ++EA LL +M S P + T
Sbjct: 455 SGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDMRSCEFHPSVVT 514
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN + G CK ++ A + ++++ GC P+ +Y VL+ + G + L +++
Sbjct: 515 YNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYRAEAMELANDLV 574
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 322 bits (825), Expect = 7e-86
Identities = 154/211 (72%), Positives = 185/211 (87%)
Frame = +2
Query: 26 RRSSDLEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIG 205
+ S +EILESH EPDVF+YNAVISGFCK+NQI++A +V+NRM+A+G PD+VTYNI+IG
Sbjct: 131 KASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIG 190
Query: 206 SLCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRP 385
SLC+R +LGLA+ +LDQLL DNC PTVITYTILIEATI EGGINEAMKLL+EML++GL P
Sbjct: 191 SLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 250
Query: 386 DMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLV 565
DMYTYNAI RGMCKEG V+RA E + +L S GCEPDVISYN+LLRA LNQG+W++GE+LV
Sbjct: 251 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310
Query: 566 TEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
EM SRGCEPN VTYSILISSLC G++++A
Sbjct: 311 AEMFSRGCEPNKVTYSILISSLCRFGRIDEA 341
Score = 158 bits (400), Expect = 1e-36
Identities = 81/198 (40%), Positives = 117/198 (59%)
Frame = +2
Query: 65 EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMK 244
EPDV SYN ++ F + D K+V M ++GC P+ VTY+ILI SLC GR+ A+
Sbjct: 284 EPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 343
Query: 245 MLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMC 424
+L ++E P +Y LI A EG ++ A+ ++D M+S G PD+ YN I +C
Sbjct: 344 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 403
Query: 425 KEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVV 604
K G ++A E L MGC P+V SYN ++ AL + G + +V MIS+G +P+ +
Sbjct: 404 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEI 463
Query: 605 TYSILISSLCHDGKVEDA 658
TY+ LIS LC DG VE+A
Sbjct: 464 TYNSLISCLCRDGLVEEA 481
Score = 141 bits (355), Expect = 2e-31
Identities = 67/195 (34%), Positives = 112/195 (57%)
Frame = +2
Query: 47 ILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGR 226
++E PD +SY+ +IS CK ++D A +++ M + GC PD+V YN ++ +LC G
Sbjct: 348 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 407
Query: 227 LGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNA 406
A+++ ++L C P V +Y +I A + G + A+ ++ M+SKG+ PD TYN+
Sbjct: 408 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNS 467
Query: 407 ITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRG 586
+ +C++G V+ A + ++ G P VISYN++L L R +D + EMI +G
Sbjct: 468 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527
Query: 587 CEPNVVTYSILISSL 631
C PN TY +LI +
Sbjct: 528 CRPNETTYILLIEGI 542
Score = 131 bits (330), Expect = 2e-28
Identities = 66/205 (32%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + P V +Y +I I+ A K++ M A+G PD+ TYN +I +C G
Sbjct: 207 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 266
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +++ L C P VI+Y IL+ A + +G +E KL+ EM S+G P+ TY+
Sbjct: 267 MVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 326
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C+ G +D A +K + PD SY+ L+ AL +GR + ++ MIS
Sbjct: 327 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 386
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +G A
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQA 411
Score = 108 bits (270), Expect = 1e-21
Identities = 53/172 (30%), Positives = 88/172 (51%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+ +YN +++ CK + A ++ N++R GC P+V +YN +I +L S G A+ M
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ ++ P ITY LI +G + EA+ LLD+M G RP + +YN + G+CK
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+D A + GC P+ +Y +L+ + G + L + SR
Sbjct: 510 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = +2
Query: 65 EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMK 244
+PD +YN++IS C+ ++ A +++ M G P V++YNI++ LC R+ A+
Sbjct: 459 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 518
Query: 245 MLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSK 373
M +++E C P TY +LIE G EAM+L + + S+
Sbjct: 519 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 62.8 bits (151), Expect = 9e-08
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 34/153 (22%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGL---------------------------------- 379
L+ + G NE++ L+ +++KG
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 380 RPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGER 559
PD++ YNA+ G CK ++ A + + + + G PD+++YN+++ +L N+ +
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 560 LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
++ +++ C P V+TY+ILI + +G + +A
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 321 bits (823), Expect = 1e-85
Identities = 153/211 (72%), Positives = 186/211 (88%)
Frame = +2
Query: 26 RRSSDLEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIG 205
+ S +EILESH EPDVF+YNAVISGFCK+N+I++A +V+NRM+A+G PD+VTYNI+IG
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 206 SLCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRP 385
SLC+R +LGLA+K+LDQLL DNC PTVITYTILIEATI EGGINEAMKLL+EML++GL P
Sbjct: 181 SLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 386 DMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLV 565
DMYTYNAI RGMCKEG V+RA E + +L S GC+PDVISYN+LLRA LNQG+W++GE+LV
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 566 TEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
EM SRGCEPN VTYSILISSLC G++++A
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331
Score = 157 bits (396), Expect = 4e-36
Identities = 80/198 (40%), Positives = 117/198 (59%)
Frame = +2
Query: 65 EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMK 244
+PDV SYN ++ F + D K+V M ++GC P+ VTY+ILI SLC GR+ A+
Sbjct: 274 KPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAIS 333
Query: 245 MLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMC 424
+L ++E P +Y LI A EG ++ A+ ++D M+S G PD+ YN I +C
Sbjct: 334 VLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 393
Query: 425 KEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVV 604
K G ++A E L MGC P+V SYN ++ AL + G + +V MIS+G +P+ +
Sbjct: 394 KNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEI 453
Query: 605 TYSILISSLCHDGKVEDA 658
TY+ LIS LC DG VE+A
Sbjct: 454 TYNSLISCLCRDGLVEEA 471
Score = 140 bits (354), Expect = 3e-31
Identities = 67/195 (34%), Positives = 112/195 (57%)
Frame = +2
Query: 47 ILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGR 226
++E PD +SY+ +IS CK ++D A +++ M + GC PD+V YN ++ +LC G
Sbjct: 338 MIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGN 397
Query: 227 LGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNA 406
A+++ ++L C P V +Y +I A + G + A+ ++ M+SKG+ PD TYN+
Sbjct: 398 ANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNS 457
Query: 407 ITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRG 586
+ +C++G V+ A + ++ G P VISYN++L L R +D + EMI +G
Sbjct: 458 LISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517
Query: 587 CEPNVVTYSILISSL 631
C PN TY +LI +
Sbjct: 518 CRPNETTYILLIEGI 532
Score = 131 bits (329), Expect = 2e-28
Identities = 66/205 (32%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + P V +Y +I I+ A K++ M A+G PD+ TYN +I +C G
Sbjct: 197 QLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEG 256
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +++ L C P VI+Y IL+ A + +G +E KL+ EM S+G P+ TY+
Sbjct: 257 MVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYS 316
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C+ G +D A +K + PD SY+ L+ AL +GR + ++ MIS
Sbjct: 317 ILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN 376
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +G A
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQA 401
Score = 108 bits (270), Expect = 1e-21
Identities = 53/172 (30%), Positives = 88/172 (51%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+ +YN +++ CK + A ++ N++R GC P+V +YN +I +L S G A+ M
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ ++ P ITY LI +G + EA+ LLD+M G RP + +YN + G+CK
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+D A + GC P+ +Y +L+ + G + L + SR
Sbjct: 500 VRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = +2
Query: 65 EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMK 244
+PD +YN++IS C+ ++ A +++ M G P V++YNI++ LC R+ A+
Sbjct: 449 DPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIG 508
Query: 245 MLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSK 373
M +++E C P TY +LIE G EAM+L + + S+
Sbjct: 509 MFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 63.9 bits (154), Expect = 4e-08
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGL---------------------------------- 379
L+ + G NE++ L+ +++KG
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 380 RPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGER 559
PD++ YNA+ G CK ++ A + + + + G PD+++YN+++ +L N+ + +
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 560 LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
++ +++ C P V+TY+ILI + +G + +A
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 320 bits (821), Expect = 2e-85
Identities = 147/206 (71%), Positives = 183/206 (88%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE G+PDVF+YNA+I+GFCK+N+ID A +V++RMR++ SPD VTYNI+IGSLCSR
Sbjct: 143 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+K+LDQLL DNC PTVITYTILIEAT+ EGG++EA+KLLDEMLS+GL+PDM+TY
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N I RGMCKEG VDRAFE ++NL GCEPDVISYN+LLRALLNQG+W +GE+L+T+M S
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
C+PNVVTYSILI++LC DGK+E+A
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEA 348
Score = 166 bits (420), Expect = 6e-39
Identities = 81/240 (33%), Positives = 133/240 (55%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+F+YN +I G CK +D A +++ + +GC PDV++YNIL+ +L ++G
Sbjct: 249 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQG 308
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ ++ + C P V+TY+ILI +G I EAM LL M KGL PD Y+Y+
Sbjct: 309 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 368
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF++ + S GC PD+++YN +L L G+
Sbjct: 369 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 428
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ ++ EM+S G +P+ +TY+ +IS LC +G V+ A
Sbjct: 429 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488
Score = 139 bits (350), Expect = 8e-31
Identities = 65/198 (32%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +I+ FC+ ++D A + + M + GC PD+V YN ++ +LC
Sbjct: 352 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 411
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ +L E C P +Y + A + G A+ ++ EM+S G+ PD T
Sbjct: 412 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEIT 471
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG VD+AFE + ++ S P V++YN++L R D ++ M+
Sbjct: 472 YNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMV 531
Query: 578 SRGCEPNVVTYSILISSL 631
GC PN TY++LI +
Sbjct: 532 GNGCRPNETTYTVLIEGI 549
Score = 135 bits (340), Expect = 1e-29
Identities = 64/205 (31%), Positives = 114/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I +D A K+++ M ++G PD+ TYN +I +C G
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +M+ L C P VI+Y IL+ A + +G E KL+ +M S+ P++ TY+
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G ++ A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +GK + A
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQA 418
Score = 98.6 bits (244), Expect = 2e-18
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE + S G PD+ +YN V++ CK + D A ++ ++ GCSP+ +YN + +L S
Sbjct: 387 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G A+ M+ +++ + P ITY +I EG +++A +LL +M S P + T
Sbjct: 447 SGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVT 506
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN + G CK ++ A + + ++ GC P+ +Y VL+ + G + L +++
Sbjct: 507 YNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
>ref|XP_006408151.1| hypothetical protein EUTSA_v10022408mg, partial [Eutrema
salsugineum] gi|557109297|gb|ESQ49604.1| hypothetical
protein EUTSA_v10022408mg, partial [Eutrema salsugineum]
Length = 460
Score = 319 bits (817), Expect = 6e-85
Identities = 146/206 (70%), Positives = 184/206 (89%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE G+PDVF+YNA+I+GFCK+N+I+ + KV++RMR++G SPD VTYNI+IGSLCSR
Sbjct: 1 MEILEKFGQPDVFAYNALINGFCKMNRIEDSTKVLDRMRSKGFSPDTVTYNIMIGSLCSR 60
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+K+LDQLL DNC PTVITYTILIEAT+ +GG++EA+KLLDEMLS+GL+PDM+TY
Sbjct: 61 GKLDLALKVLDQLLTDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTY 120
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N I RGMCKEG V+RAFE V+NL GCEPDVISYN+LLRALLNQG+W +GE+L+T+M S
Sbjct: 121 NTIIRGMCKEGMVERAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 180
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
CEPNVVTYSILI++LC DGK+++A
Sbjct: 181 EKCEPNVVTYSILITTLCRDGKIDEA 206
Score = 167 bits (424), Expect = 2e-39
Identities = 81/240 (33%), Positives = 136/240 (56%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+F+YN +I G CK ++ A ++V + +GC PDV++YNIL+ +L ++G
Sbjct: 107 EMLSRGLKPDMFTYNTIIRGMCKEGMVERAFEMVRNLELRGCEPDVISYNILLRALLNQG 166
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ ++ + C P V+TY+ILI +G I+EA+ LL M KGL PD Y+Y+
Sbjct: 167 KWEEGEKLMTKMFSEKCEPNVVTYSILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSYD 226
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF++ + S GC PD+++YN +L L G+
Sbjct: 227 PLIAAFCREGRLDLAIEFLETMISEGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 286
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ +++EM+S G +P+ +TY+ +IS LC +G VE+A
Sbjct: 287 GCSPNSSSYNTMFSALWSSGDKIRGLQMISEMMSHGIDPDEITYNSMISCLCREGMVEEA 346
Score = 137 bits (346), Expect = 2e-30
Identities = 63/198 (31%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +I+ FC+ ++D A + + M ++GC PD+V YN ++ +LC
Sbjct: 210 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDLAIEFLETMISEGCLPDIVNYNTVLATLCK 269
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ +L E C P +Y + A + G ++++ EM+S G+ PD T
Sbjct: 270 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRGLQMISEMMSHGIDPDEIT 329
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG V+ AFE + ++ S P V++YN++L R D ++ M+
Sbjct: 330 YNSMISCLCREGMVEEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMV 389
Query: 578 SRGCEPNVVTYSILISSL 631
GC PN TY++LI +
Sbjct: 390 ENGCRPNETTYTMLIEGI 407
Score = 136 bits (342), Expect = 7e-30
Identities = 65/205 (31%), Positives = 114/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I +D A K+++ M ++G PD+ TYN +I +C G
Sbjct: 72 QLLTDNCQPTVITYTILIEATMLDGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 131
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +M+ L C P VI+Y IL+ A + +G E KL+ +M S+ P++ TY+
Sbjct: 132 MVERAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCEPNVVTYS 191
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G +D A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 192 ILITTLCRDGKIDEALNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDLAIEFLETMISE 251
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +GK + A
Sbjct: 252 GCLPDIVNYNTVLATLCKNGKADQA 276
Score = 105 bits (263), Expect = 1e-20
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 1/196 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE + S G PD+ +YN V++ CK + D A ++ ++ GCSP+ +YN + +L S
Sbjct: 245 LETMISEGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 304
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G ++M+ +++ P ITY +I EG + EA +LL +M S P + T
Sbjct: 305 SGDKIRGLQMISEMMSHGIDPDEITYNSMISCLCREGMVEEAFELLVDMRSCEFHPSVVT 364
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN + G CK ++ A + ++++ GC P+ +Y +L+ + G + L +++
Sbjct: 365 YNIVLLGFCKAHRIEDAIDVLESMVENGCRPNETTYTMLIEGIGFAGYRAEAMELANDLV 424
Query: 578 SRGCEPNVVTYSILIS 625
SR E + Y +++
Sbjct: 425 SRFLEHELCFYRCVLT 440
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical
protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis
thaliana] gi|22136960|gb|AAM91709.1| unknown protein
[Arabidopsis thaliana] gi|332640611|gb|AEE74132.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 602
Score = 318 bits (815), Expect = 9e-85
Identities = 146/206 (70%), Positives = 183/206 (88%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE G+PDVF+YNA+I+GFCK+N+ID A +V++RMR++ SPD VTYNI+IGSLCSR
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+K+L+QLL DNC PTVITYTILIEAT+ EGG++EA+KL+DEMLS+GL+PDM+TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N I RGMCKEG VDRAFE V+NL GCEPDVISYN+LLRALLNQG+W +GE+L+T+M S
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
C+PNVVTYSILI++LC DGK+E+A
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEA 352
Score = 167 bits (422), Expect = 4e-39
Identities = 82/240 (34%), Positives = 134/240 (55%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+F+YN +I G CK +D A ++V + +GC PDV++YNIL+ +L ++G
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ ++ + C P V+TY+ILI +G I EAM LL M KGL PD Y+Y+
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF++ + S GC PD+++YN +L L G+
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ ++ EM+S G +P+ +TY+ +IS LC +G V++A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 139 bits (351), Expect = 6e-31
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +I+ FC+ ++D A + + M + GC PD+V YN ++ +LC
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ +L E C P +Y + A + G A+ ++ EM+S G+ PD T
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG VD AFE + ++ S P V++YN++L R D ++ M+
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 578 SRGCEPNVVTYSILISSL 631
GC PN TY++LI +
Sbjct: 536 GNGCRPNETTYTVLIEGI 553
Score = 135 bits (339), Expect = 1e-29
Identities = 64/205 (31%), Positives = 114/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I +D A K+++ M ++G PD+ TYN +I +C G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +M+ L C P VI+Y IL+ A + +G E KL+ +M S+ P++ TY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G ++ A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +GK + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQA 422
Score = 100 bits (249), Expect = 4e-19
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE + S G PD+ +YN V++ CK + D A ++ ++ GCSP+ +YN + +L S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G A+ M+ +++ + P ITY +I EG ++EA +LL +M S P + T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN + G CK ++ A ++++ GC P+ +Y VL+ + G + L +++
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum tuberosum]
Length = 583
Score = 317 bits (811), Expect = 3e-84
Identities = 151/208 (72%), Positives = 188/208 (90%), Gaps = 2/208 (0%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
++ILE GEPDVF+YNA+ISGFCK+N+I+ ANKV+NRM+A+G PD VTYNILIGSLC R
Sbjct: 120 MQILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDR 179
Query: 221 GRLGLAMKMLDQLLEDN-CHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+LG A+K+LDQL E+N C PTVITYTILIEATI EGGI+EAMKLLDEMLS+GL+PDMYT
Sbjct: 180 GKLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYT 239
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALL-NQGRWNDGERLVTEM 574
YNAI RGMC+E +D+A+EFV++LPS GC+PDVISYN+LLRALL ++G+W+DGE+L+ EM
Sbjct: 240 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEM 299
Query: 575 ISRGCEPNVVTYSILISSLCHDGKVEDA 658
+S GCEPNVVTYSIL+S+LC DGK+++A
Sbjct: 300 LSAGCEPNVVTYSILMSALCRDGKLDEA 327
Score = 157 bits (398), Expect = 2e-36
Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 36/241 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSA------------------------------ 133
E+L +PD+++YNA+I G C+ +D A
Sbjct: 227 EMLSRGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHK 286
Query: 134 ------NKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKMLDQLLEDNCHPTVITY 295
K++N M + GC P+VVTY+IL+ +LC G+L A+ +L +++ P TY
Sbjct: 287 GKWSDGEKLMNEMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTY 346
Query: 296 TILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPS 475
LI A G ++ A+K LD M+S G PD+ YN I MCK+G D A E + L
Sbjct: 347 DPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAE 406
Query: 476 MGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVED 655
+GC PDV +YN L+ AL N G ++V+EMI +G +P+ +TY+ LIS LC DG V +
Sbjct: 407 IGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNE 466
Query: 656 A 658
A
Sbjct: 467 A 467
Score = 151 bits (381), Expect = 2e-34
Identities = 74/203 (36%), Positives = 120/203 (59%), Gaps = 1/203 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L+I+ G PD F+Y+ +IS FCK ++D A K ++ M + GC PD+V YN ++ ++C
Sbjct: 331 LKIMMDKGLTPDTFTYDPLISAFCKGGRLDLAIKFLDYMISNGCLPDIVNYNTILSTMCK 390
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
+G+ AM++ ++L E C P V TY L+ A GG A+K++ EM+ KG+ PD T
Sbjct: 391 KGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEIT 450
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YNA+ +C++G V+ A + + ++ G P VI+YN+LL L R + ++ EM+
Sbjct: 451 YNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMV 510
Query: 578 SRGCEPNVVTYSILISSLCHDGK 646
+G PN TY +LI + G+
Sbjct: 511 EKGRRPNETTYILLIEGIGFSGR 533
Score = 137 bits (344), Expect = 4e-30
Identities = 67/205 (32%), Positives = 114/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L + EP+V +Y+ ++S C+ ++D A ++ M +G +PD TY+ LI + C G
Sbjct: 298 EMLSAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGG 357
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
RL LA+K LD ++ + C P ++ Y ++ +G +EAM++ +++ G PD+ TYN
Sbjct: 358 RLDLAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYN 417
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ + G RA + V + G +PD I+YN L+ L G N+ L+ +M
Sbjct: 418 TLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGN 477
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
G P V+TY+IL+ LC +V +A
Sbjct: 478 GFPPTVITYNILLLGLCKAHRVVEA 502
Score = 78.2 bits (191), Expect = 2e-12
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
+E+ E E PDV +YN ++S A K+V+ M +G PD +TYN LI
Sbjct: 398 MEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISC 457
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + + PTVITY IL+ + EA+++L EM+ KG RP+
Sbjct: 458 LCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPN 517
Query: 389 MYTYNAITRGMCKEGTVDRAFE 454
TY + G+ G +A E
Sbjct: 518 ETTYILLIEGIGFSGRRVQAME 539
Score = 70.1 bits (170), Expect = 6e-10
Identities = 36/111 (32%), Positives = 58/111 (52%)
Frame = +2
Query: 326 GGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISY 505
G +E + LL+ L G +PD+ + +G C D+ + ++ L G EPDV +Y
Sbjct: 76 GKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKVMQILEQFG-EPDVFAY 134
Query: 506 NVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
N L+ + + +++ M +RG P+ VTY+ILI SLC GK+ A
Sbjct: 135 NALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRGKLGSA 185
Score = 67.4 bits (163), Expect = 4e-09
Identities = 36/110 (32%), Positives = 60/110 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++E +PD +YNA+IS C+ ++ A ++ M G P V+TYNIL+ LC
Sbjct: 438 EMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAH 497
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSK 373
R+ A+++L +++E P TY +LIE G +AM++ + K
Sbjct: 498 RVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGRRVQAMEMASAIYHK 547
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 314 bits (805), Expect = 1e-83
Identities = 145/206 (70%), Positives = 182/206 (88%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE G+PDVF+YNA+I+GFCK+N+ID A +V++RMR++ SPD VTYNI+IGSLCSR
Sbjct: 147 MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+K+L+QLL DNC PTVITYTILIEAT+ EGG++EA+KL+DEMLS+GL+PDM+TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N I RGMCKEG VDRAFE V+NL G EPDVISYN+LLRALLNQG+W +GE+L+T+M S
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
C+PNVVTYSILI++LC DGK+E+A
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEA 352
Score = 163 bits (412), Expect = 5e-38
Identities = 81/240 (33%), Positives = 133/240 (55%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L +PD+F+YN +I G CK +D A ++V + +G PDV++YNIL+ +L ++G
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQG 312
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ ++ + C P V+TY+ILI +G I EAM LL M KGL PD Y+Y+
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF++ + S GC PD+++YN +L L G+
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV 432
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ ++ EM+S G +P+ +TY+ +IS LC +G V++A
Sbjct: 433 GCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 139 bits (351), Expect = 6e-31
Identities = 65/198 (32%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L++++ G PD +SY+ +I+ FC+ ++D A + + M + GC PD+V YN ++ +LC
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ A+++ +L E C P +Y + A + G A+ ++ EM+S G+ PD T
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG VD AFE + ++ S P V++YN++L R D ++ M+
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 578 SRGCEPNVVTYSILISSL 631
GC PN TY++LI +
Sbjct: 536 GNGCRPNETTYTVLIEGI 553
Score = 131 bits (329), Expect = 2e-28
Identities = 63/205 (30%), Positives = 113/205 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I +D A K+++ M ++G PD+ TYN +I +C G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ A +M+ L P VI+Y IL+ A + +G E KL+ +M S+ P++ TY+
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G ++ A +K + G PD SY+ L+ A +GR + + MIS
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++LC +GK + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQA 422
Score = 100 bits (249), Expect = 4e-19
Identities = 53/180 (29%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE + S G PD+ +YN V++ CK + D A ++ ++ GCSP+ +YN + +L S
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G A+ M+ +++ + P ITY +I EG ++EA +LL +M S P + T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN + G CK ++ A ++++ GC P+ +Y VL+ + G + L +++
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Citrus sinensis]
Length = 583
Score = 309 bits (791), Expect = 6e-82
Identities = 148/206 (71%), Positives = 179/206 (86%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE +GEPDVF+YNA+ISGFCK NQI+ ANKV++R+R++G SPDVVTYNI+IGSLCSR
Sbjct: 127 MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 186
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G + A K+ DQLL DNC PTVITYTILI+AT+ EG ++AMKLLDEML++GL PDM+T
Sbjct: 187 GMIESAFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFTN 246
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMCK+G V +AF+FV++L S GC+PDVISYN+LLR LLN G+W +GE+L+TEMIS
Sbjct: 247 NAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 306
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
RG EPNVVTYSILISSLC DGK EDA
Sbjct: 307 RGLEPNVVTYSILISSLCRDGKTEDA 332
Score = 151 bits (382), Expect = 2e-34
Identities = 75/232 (32%), Positives = 126/232 (54%), Gaps = 35/232 (15%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+F+ NA+I G CK + A + V + ++GC PDV++YN+L+ +L + G+ K+
Sbjct: 241 PDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 300
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ +++ P V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK
Sbjct: 301 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 360
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR---------------------- 541
+G +D A EF+ + S GC PD+++YN +L A G
Sbjct: 361 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 420
Query: 542 --------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ +++EM+S+G EP+ +TY+ LIS LC DG V++A
Sbjct: 421 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 472
Score = 140 bits (354), Expect = 3e-31
Identities = 64/192 (33%), Positives = 110/192 (57%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD +SY+ +IS +CK ++D A + ++ M + GC PD+V YN ++ + C G A+++
Sbjct: 346 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 405
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
++L + C P V +Y + A + G A+ ++ EMLSKG+ PD TYN++ +C+
Sbjct: 406 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 465
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVT 607
+G VD A + ++ S P VISYN+++ R N+ ++ M +GC+PN T
Sbjct: 466 DGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPNETT 525
Query: 608 YSILISSLCHDG 643
Y +LI + + G
Sbjct: 526 YVLLIEGIGYGG 537
Score = 131 bits (330), Expect = 2e-28
Identities = 63/205 (30%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I Q D A K+++ M A+G PD+ T N +I +C +G
Sbjct: 198 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMLARGLIPDMFTNNAIIRGMCKKG 257
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+G A + + L C P VI+Y +L+ + G E KL+ EM+S+GL P++ TY+
Sbjct: 258 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 317
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G + A + ++ G PD SY+ L+ A GR + + MIS
Sbjct: 318 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 377
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++ C +G + A
Sbjct: 378 GCLPDIVNYNTILAAFCKNGNADQA 402
Score = 122 bits (307), Expect = 8e-26
Identities = 58/205 (28%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++ EP+V +Y+ +IS C+ + + A V+ + +G +PD +Y+ LI + C G
Sbjct: 303 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 362
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
RL LA++ LD ++ D C P ++ Y ++ A G ++A+++ +++ G P++ +YN
Sbjct: 363 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 422
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ + G RA + + S G EPD I+YN L+ L G ++ L+ +M S
Sbjct: 423 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 482
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
P V++Y+I+I C ++ ++
Sbjct: 483 RFRPTVISYNIIILGFCKTRRINES 507
Score = 100 bits (250), Expect = 3e-19
Identities = 52/159 (32%), Positives = 85/159 (53%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+ +YN +++ FCK D A ++ ++ GC P+V +YN + +L S G A+ M
Sbjct: 381 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 440
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ ++L P ITY LI +G ++EA+ LL +M S RP + +YN I G CK
Sbjct: 441 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCK 500
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRW 544
++ + E + + GC+P+ +Y VLL + G W
Sbjct: 501 TRRINESIEVLAAMFEKGCKPNETTY-VLLIEGIGYGGW 538
Score = 74.3 bits (181), Expect = 3e-11
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
LEI E + P+V SYN + S A +++ M ++G PD +TYN LI
Sbjct: 403 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 462
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + PTVI+Y I+I INE++++L M KG +P+
Sbjct: 463 LCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGCKPN 522
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNLPSM 478
TY + G+ G A E L SM
Sbjct: 523 ETTYVLLIEGIGYGGWRAEAMELANALVSM 552
>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Solanum lycopersicum]
Length = 575
Score = 308 bits (789), Expect = 1e-81
Identities = 147/208 (70%), Positives = 183/208 (87%), Gaps = 2/208 (0%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
++ILE GEPDVF+YNA++SGFCK+N+I+ ANKV+NRM+ G PD VTYNILIGSLC R
Sbjct: 115 MQILEQFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCDR 174
Query: 221 GRLGLAMKMLDQLLED-NCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+LG A+ +LDQL E+ NC PTVITYTILIEATI EGGI+EAMKLLDEMLS GL+PDMYT
Sbjct: 175 GKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMYT 234
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALL-NQGRWNDGERLVTEM 574
YNAI RGMC+E +D+A+EFV++LPS GC+PDVISYN+LLRALL ++G+W+DGE+L+ EM
Sbjct: 235 YNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNEM 294
Query: 575 ISRGCEPNVVTYSILISSLCHDGKVEDA 658
+ GCEPNVVTYSIL+S+LC DGK+++A
Sbjct: 295 LCAGCEPNVVTYSILMSALCRDGKLDEA 322
Score = 155 bits (393), Expect = 8e-36
Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 36/241 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSA------------------------------ 133
E+L +PD+++YNA+I G C+ +D A
Sbjct: 222 EMLSIGLQPDMYTYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHR 281
Query: 134 ------NKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKMLDQLLEDNCHPTVITY 295
K++N M GC P+VVTY+IL+ +LC G+L A+ +L +++ P TY
Sbjct: 282 GKWSDGEKLMNEMLCAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTY 341
Query: 296 TILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPS 475
LI A G ++ A+K LD M++ G PD+ YN I MCK+G D A E + L
Sbjct: 342 DPLISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAE 401
Query: 476 MGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVED 655
+GC PDV +YN L+ AL N G ++V+EMI +G +P+ +TY+ LIS LC DG V +
Sbjct: 402 IGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNE 461
Query: 656 A 658
A
Sbjct: 462 A 462
Score = 155 bits (393), Expect = 8e-36
Identities = 75/203 (36%), Positives = 120/203 (59%), Gaps = 1/203 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L+I+ G PD F+Y+ +IS FCK ++D A K ++ M GC PD+V YN ++ ++C
Sbjct: 326 LKIMVDKGLTPDTFTYDPLISAFCKGGRLDMAIKFLDYMITNGCLPDIVNYNTILSTMCK 385
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
+G+ AM++ ++L E C P V TY L+ A GG A+K++ EM+ KG+ PD T
Sbjct: 386 KGKADEAMEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEIT 445
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YNA+ +C++G V+ A + + ++ G P VI+YN+LL L R + ++ EM+
Sbjct: 446 YNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMV 505
Query: 578 SRGCEPNVVTYSILISSLCHDGK 646
+GC PN TY +LI + G+
Sbjct: 506 EKGCRPNETTYILLIEGIGFSGR 528
Score = 78.6 bits (192), Expect = 2e-12
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
+E+ E E PDV +YN ++S A K+V+ M +G PD +TYN LI
Sbjct: 393 MEVFEKLAEIGCPPDVSTYNTLMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISC 452
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + + PTVITY IL+ + EA+++L EM+ KG RP+
Sbjct: 453 LCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPN 512
Query: 389 MYTYNAITRGMCKEGTVDRAFE 454
TY + G+ G +A E
Sbjct: 513 ETTYILLIEGIGFSGRRVQAME 534
Score = 71.6 bits (174), Expect = 2e-10
Identities = 37/110 (33%), Positives = 61/110 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++E +PD +YNA+IS C+ ++ A ++ M G P V+TYNIL+ LC
Sbjct: 433 EMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFPPTVITYNILLLGLCKAH 492
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSK 373
R+ A+++L +++E C P TY +LIE G +AM++ + K
Sbjct: 493 RVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGRRVQAMEMATAIYHK 542
>gb|EYU19809.1| hypothetical protein MIMGU_mgv1a005320mg [Mimulus guttatus]
Length = 489
Score = 307 bits (786), Expect = 2e-81
Identities = 141/206 (68%), Positives = 180/206 (87%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
++ILE +GEPD+F+YNA ISG CK+N+IDSAN V++RMRA+G SPD+VTYNILIGSLC+R
Sbjct: 33 MDILERYGEPDIFAYNAYISGLCKVNRIDSANGVLSRMRARGFSPDIVTYNILIGSLCNR 92
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L +A++MLDQL++D C PTVITYTILIEATI EGGI EAMKL DE+LS+GL+PDMYTY
Sbjct: 93 GKLDMALEMLDQLMDDRCLPTVITYTILIEATILEGGIGEAMKLFDEILSRGLKPDMYTY 152
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
N + RGMC+EG +D AF+FV++L S C+PDVISYN+LLRALLNQG+W+DG L+ EM S
Sbjct: 153 NTVIRGMCREGLMDEAFDFVRSLTSRNCKPDVISYNILLRALLNQGKWDDGAELINEMFS 212
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
CE NVVTYSI+IS+LC +G++++A
Sbjct: 213 NRCEFNVVTYSIMISALCREGQLDEA 238
Score = 158 bits (399), Expect = 2e-36
Identities = 79/240 (32%), Positives = 135/240 (56%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
EIL +PD+++YN VI G C+ +D A V + ++ C PDV++YNIL+ +L ++G
Sbjct: 139 EILSRGLKPDMYTYNTVIRGMCREGLMDEAFDFVRSLTSRNCKPDVISYNILLRALLNQG 198
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ ++++++ + C V+TY+I+I A EG ++EA+ LL M+ +GL PD YT++
Sbjct: 199 KWDDGAELINEMFSNRCEFNVVTYSIMISALCREGQLDEAINLLKIMIDEGLTPDTYTFD 258
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ +C+EG +D A F+ + S GC PD+++YN +L AL G+
Sbjct: 259 PLISALCREGRLDLAIAFLDYMISSGCFPDIVNYNTILSALCKNGKSEEAMEVFSKLDES 318
Query: 542 ----------------WNDGE-----RLVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
WN+G+ RL+++M ++G P+ +TY+ LIS LC +G V+ A
Sbjct: 319 GCPPDVSTYNTMVSALWNNGDRIRAYRLLSDMFTKGISPDGITYNSLISCLCREGMVDGA 378
Score = 142 bits (357), Expect = 1e-31
Identities = 67/198 (33%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
L+I+ G PD ++++ +IS C+ ++D A ++ M + GC PD+V YN ++ +LC
Sbjct: 242 LKIMIDEGLTPDTYTFDPLISALCREGRLDLAIAFLDYMISSGCFPDIVNYNTILSALCK 301
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G+ AM++ +L E C P V TY ++ A G A +LL +M +KG+ PD T
Sbjct: 302 NGKSEEAMEVFSKLDESGCPPDVSTYNTMVSALWNNGDRIRAYRLLSDMFTKGISPDGIT 361
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C+EG VD A E + ++ +G P V++YN++L L R D ++ EM+
Sbjct: 362 YNSLISCLCREGMVDGAIELLGDMRKIGFLPTVVTYNIVLLGLCKAHRIGDAVLMLEEMV 421
Query: 578 SRGCEPNVVTYSILISSL 631
+GC+PN +Y +L+ +
Sbjct: 422 EKGCQPNETSYVLLVEGI 439
Score = 101 bits (251), Expect = 2e-19
Identities = 52/177 (29%), Positives = 89/177 (50%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+ +YN ++S CK + + A +V +++ GC PDV TYN ++ +L + G A ++
Sbjct: 287 PDIVNYNTILSALCKNGKSEEAMEVFSKLDESGCPPDVSTYNTMVSALWNNGDRIRAYRL 346
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
L + P ITY LI EG ++ A++LL +M G P + TYN + G+CK
Sbjct: 347 LSDMFTKGISPDGITYNSLISCLCREGMVDGAIELLGDMRKIGFLPTVVTYNIVLLGLCK 406
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPN 598
+ A ++ + GC+P+ SY +L+ + G + L + +G N
Sbjct: 407 AHRIGDAVLMLEEMVEKGCQPNETSYVLLVEGIGFAGWRVEAMELANTLCEKGVISN 463
Score = 80.5 bits (197), Expect = 4e-13
Identities = 51/156 (32%), Positives = 79/156 (50%)
Frame = +2
Query: 53 ESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLG 232
ES PDV +YN ++S A ++++ M +G SPD +TYN LI LC G +
Sbjct: 317 ESGCPPDVSTYNTMVSALWNNGDRIRAYRLLSDMFTKGISPDGITYNSLISCLCREGMVD 376
Query: 233 LAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAIT 412
A+++L + + PTV+TY I++ I +A+ +L+EM+ KG +P+ +Y +
Sbjct: 377 GAIELLGDMRKIGFLPTVVTYNIVLLGLCKAHRIGDAVLMLEEMVEKGCQPNETSYVLLV 436
Query: 413 RGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLR 520
G+ G A E L CE VIS L R
Sbjct: 437 EGIGFAGWRVEAMELANTL----CEKGVISNQSLRR 468
>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
gi|557544927|gb|ESR55905.1| hypothetical protein
CICLE_v10019446mg [Citrus clementina]
Length = 583
Score = 306 bits (783), Expect = 5e-81
Identities = 146/206 (70%), Positives = 177/206 (85%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE +GEPDVF+YNA+ISGFCK NQI+ ANKV++R+R++G SPDVVTYNI+IGSLCSR
Sbjct: 127 MEILEKYGEPDVFAYNALISGFCKANQIELANKVLDRLRSRGFSPDVVTYNIMIGSLCSR 186
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G + K+ DQLL DNC PTVITYTILI+AT+ EG ++AMKLLDEM ++GL PDM+T
Sbjct: 187 GMIESGFKVFDQLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFTN 246
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMCK+G V +AF+FV++L S GC+PDVISYN+LLR LLN G+W +GE+L+TEMIS
Sbjct: 247 NAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMIS 306
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
RG EPNVVTYSILISSLC DGK EDA
Sbjct: 307 RGLEPNVVTYSILISSLCRDGKTEDA 332
Score = 151 bits (382), Expect = 2e-34
Identities = 75/232 (32%), Positives = 126/232 (54%), Gaps = 35/232 (15%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+F+ NA+I G CK + A + V + ++GC PDV++YN+L+ +L + G+ K+
Sbjct: 241 PDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKL 300
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ +++ P V+TY+ILI + +G +A+ +L KGL PD Y+Y+ + CK
Sbjct: 301 MTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCK 360
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR---------------------- 541
+G +D A EF+ + S GC PD+++YN +L A G
Sbjct: 361 DGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSS 420
Query: 542 --------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G++ +++EM+S+G EP+ +TY+ LIS LC DG V++A
Sbjct: 421 YNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEA 472
Score = 140 bits (353), Expect = 4e-31
Identities = 63/192 (32%), Positives = 110/192 (57%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD +SY+ +IS +CK ++D A + ++ M + GC PD+V YN ++ + C G A+++
Sbjct: 346 PDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEI 405
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
++L + C P V +Y + A + G A+ ++ EMLSKG+ PD TYN++ +C+
Sbjct: 406 FEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCR 465
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVT 607
+G VD A + ++ S P V+SYN+++ R N+ ++ M +GC+PN T
Sbjct: 466 DGMVDEAVGLLVDMESTRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPNETT 525
Query: 608 YSILISSLCHDG 643
Y +LI + + G
Sbjct: 526 YVLLIEGIGYGG 537
Score = 131 bits (329), Expect = 2e-28
Identities = 63/205 (30%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +P V +Y +I Q D A K+++ M A+G PD+ T N +I +C +G
Sbjct: 198 QLLRDNCKPTVITYTILIQATMLEGQTDKAMKLLDEMFARGLIPDMFTNNAIIRGMCKKG 257
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+G A + + L C P VI+Y +L+ + G E KL+ EM+S+GL P++ TY+
Sbjct: 258 MVGQAFQFVRSLESRGCQPDVISYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYS 317
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ +C++G + A + ++ G PD SY+ L+ A GR + + MIS
Sbjct: 318 ILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISD 377
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GC P++V Y+ ++++ C +G + A
Sbjct: 378 GCLPDIVNYNTILAAFCKNGNADQA 402
Score = 124 bits (311), Expect = 3e-26
Identities = 60/205 (29%), Positives = 111/205 (54%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++ EP+V +Y+ +IS C+ + + A V+ + +G +PD +Y+ LI + C G
Sbjct: 303 EMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAAKEKGLTPDAYSYDPLISAYCKDG 362
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
RL LA++ LD ++ D C P ++ Y ++ A G ++A+++ +++ G P++ +YN
Sbjct: 363 RLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYN 422
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
+ + G RA + + S G EPD I+YN L+ L G ++ L+ +M S
Sbjct: 423 TMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMEST 482
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
P VV+Y+I+I C ++ +A
Sbjct: 483 RFRPTVVSYNIIILGFCKTRRINEA 507
Score = 102 bits (253), Expect = 1e-19
Identities = 53/159 (33%), Positives = 85/159 (53%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD+ +YN +++ FCK D A ++ ++ GC P+V +YN + +L S G A+ M
Sbjct: 381 PDIVNYNTILAAFCKNGNADQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGM 440
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+ ++L P ITY LI +G ++EA+ LL +M S RP + +YN I G CK
Sbjct: 441 ISEMLSKGIEPDEITYNSLISCLCRDGMVDEAVGLLVDMESTRFRPTVVSYNIIILGFCK 500
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRW 544
++ A E + + GC+P+ +Y VLL + G W
Sbjct: 501 TRRINEAIEVLAAMFEKGCKPNETTY-VLLIEGIGYGGW 538
Score = 75.1 bits (183), Expect = 2e-11
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
LEI E + P+V SYN + S A +++ M ++G PD +TYN LI
Sbjct: 403 LEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSLISC 462
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+ +L + PTV++Y I+I INEA+++L M KG +P+
Sbjct: 463 LCRDGMVDEAVGLLVDMESTRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGCKPN 522
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNLPSM 478
TY + G+ G A E L SM
Sbjct: 523 ETTYVLLIEGIGYGGWRAEAMELANALVSM 552
>ref|XP_006375855.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550324943|gb|ERP53652.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 479
Score = 305 bits (782), Expect = 6e-81
Identities = 142/205 (69%), Positives = 181/205 (88%), Gaps = 1/205 (0%)
Frame = +2
Query: 47 ILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGR 226
ILE HG+PDVF+YNAVISGFCK N+I+SA V++RM+ +G SPDVVT+NI+IG+ C +G+
Sbjct: 35 ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94
Query: 227 LGLAMKMLDQLLEDN-CHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ LA+K+ ++LL+DN C PT+ITYTILIEA I EGGI+EA+KLLDEMLS+GL PD +TYN
Sbjct: 95 IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISR 583
ITRG+CKEG VDRAFEFV+ L S GC+PDVI+YN+LLRALLNQG+W++GE+ ++E+ SR
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214
Query: 584 GCEPNVVTYSILISSLCHDGKVEDA 658
GCEPNVVTYSILISSLC DGK+E++
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEES 239
Score = 162 bits (411), Expect = 7e-38
Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L EPD F+YN + G CK ++D A + V + ++GC PDV+TYNIL+ +L ++G
Sbjct: 140 EMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQG 199
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K + ++ C P V+TY+ILI + +G I E++ L+ M KGL PD Y Y+
Sbjct: 200 KWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYD 259
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A EF+ + G PD+++YN ++ AL G
Sbjct: 260 PLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEV 319
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G+R ++++M+S+G +P+V+TY+ LIS LC DG V++A
Sbjct: 320 GCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEA 379
Score = 131 bits (329), Expect = 2e-28
Identities = 61/188 (32%), Positives = 109/188 (57%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD + Y+ +I+ FC+ ++D A + ++ M G PD+V YN ++ +LC G A+++
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+L E C P V +Y ++ A + G A+ ++ +MLSKG+ PD+ TYN++ +C+
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVT 607
+G VD A + ++ S +P+++SY +L L R +D ++ MI GC+PN T
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETT 432
Query: 608 YSILISSL 631
Y++LI +
Sbjct: 433 YTLLIEGI 440
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/89 (32%), Positives = 53/89 (59%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L +PDV +YN++IS C+ +D A ++ M + P++V+Y ++ LC
Sbjct: 350 QMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAH 409
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIE 310
R+ A+++L ++E+ C P TYT+LIE
Sbjct: 410 RIDDAIEVLAAMIENGCQPNETTYTLLIE 438
>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 301 bits (771), Expect = 1e-79
Identities = 139/206 (67%), Positives = 179/206 (86%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE++G+PDV+SYNA+ISGF K NQIDSAN+V +RMR++G SPDVVTYNI+IGSLCSR
Sbjct: 120 MEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA +++D+LL+D C P+VITYTILIEATI EG INEA++L DE++S+GLRPD+YTY
Sbjct: 180 GKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTY 239
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RG+CKEG DRA +FV++L + GC PDV+SYN+LLR+ LN+ RW DGERL+ +M+
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
GCEPNVVT+SILISS C +G+V +A
Sbjct: 300 SGCEPNVVTHSILISSFCREGRVREA 325
Score = 157 bits (398), Expect = 2e-36
Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++ PD+++YNA+I G CK D A V + A+GC+PDVV+YNIL+ S ++
Sbjct: 226 ELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKS 285
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
R +++ ++ C P V+T++ILI + EG + EA+ +L+ M KGL PD Y+Y+
Sbjct: 286 RWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYD 345
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQG--------------- 538
+ CKEG +D A E+++ + S GC PD+++YN +L L G
Sbjct: 346 PLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEV 405
Query: 539 ---------------RWNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G + +++EMI +G +P+ +TY+ LIS LC DG V++A
Sbjct: 406 GCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA 465
Score = 142 bits (359), Expect = 7e-32
Identities = 69/202 (34%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
Frame = +2
Query: 41 LEILESHG-EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCS 217
LE+++ G PD +SY+ +IS FCK ++D A + + +M + GC PD+V YN ++ +LC
Sbjct: 329 LEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCK 388
Query: 218 RGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G LA+ + ++L E C PTV Y + A + G +A++++ EM+ KG+ PD T
Sbjct: 389 FGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEIT 448
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN++ +C++G VD A + ++ + +P VIS+N++L + R +G L+ M+
Sbjct: 449 YNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMV 508
Query: 578 SRGCEPNVVTYSILISSLCHDG 643
+GC PN +Y +LI + + G
Sbjct: 509 EKGCLPNETSYVLLIEGIAYAG 530
Score = 73.9 bits (180), Expect = 4e-11
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 34/153 (22%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGLR--------------------------------- 382
L+ + G NE++ L+ ++SKG +
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 383 -PDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGER 559
PD+Y+YNA+ G K +D A + + S G PDV++YN+++ +L ++G+
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187
Query: 560 LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
++ E++ GC+P+V+TY+ILI + +G++ +A
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEA 220
Score = 64.3 bits (155), Expect = 3e-08
Identities = 39/138 (28%), Positives = 65/138 (47%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
P V +YN + S A ++++ M +G PD +TYN LI LC G + A+ +
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
L + PTVI++ I++ + E ++LL M+ KG P+ +Y + G+
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAY 528
Query: 428 EGTVDRAFEFVKNLPSMG 481
G A E +L +G
Sbjct: 529 AGWRAEAMELANSLYRLG 546
Score = 60.8 bits (146), Expect = 4e-07
Identities = 32/112 (28%), Positives = 60/112 (53%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E++ +PD +YN++IS C+ +D A ++ M A P V+++NI++ +C
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGL 379
R+ +++L ++E C P +Y +LIE G EAM+L + + G+
Sbjct: 496 RVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 299 bits (765), Expect = 6e-79
Identities = 138/206 (66%), Positives = 182/206 (88%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE +G+PDVF+YNA+ISGF K NQ+++AN+V++RM+++G PDVVTYNI+IGS CSR
Sbjct: 127 MEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSR 186
Query: 221 GRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTY 400
G+L LA+++ ++LL+DNC PTVITYTILIEATI +GGI+ AMKLLDEMLSKGL PD TY
Sbjct: 187 GKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTY 246
Query: 401 NAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMIS 580
NAI RGMCKE VD+AFE +++L S GC+PD+I+YN+LLR LL++G+W++GE+L++EMIS
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306
Query: 581 RGCEPNVVTYSILISSLCHDGKVEDA 658
GC+PNVVT+SILI +LC DGKVE+A
Sbjct: 307 IGCKPNVVTHSILIGTLCRDGKVEEA 332
Score = 168 bits (425), Expect = 2e-39
Identities = 81/240 (33%), Positives = 136/240 (56%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L EPD +YNA+I G CK +D A +++ + ++GC PD++TYNIL+ +L SRG
Sbjct: 233 EMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRG 292
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++ +++ C P V+T++ILI +G + EA+ LL M KGL+PD Y Y+
Sbjct: 293 KWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYD 352
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ G C+EG +D A EF++ + S GC PD+++YN ++ L G+
Sbjct: 353 PLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEV 412
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W+ G+R ++ +++++G +P+ +TY+ LIS LC DG V++A
Sbjct: 413 GCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEA 472
Score = 143 bits (361), Expect = 4e-32
Identities = 65/193 (33%), Positives = 114/193 (59%)
Frame = +2
Query: 65 EPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMK 244
+PD + Y+ +I+GFC+ ++D A + + M + GC PD+V YN ++ LC G+ A++
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404
Query: 245 MLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMC 424
+ ++L E C P V +Y L A + G A++++ ++L++G+ PD TYN++ +C
Sbjct: 405 VFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC 464
Query: 425 KEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVV 604
++G VD A E + ++ S P+V+SYN++L L R ND ++ M +GC+PN
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524
Query: 605 TYSILISSLCHDG 643
TY +LI + G
Sbjct: 525 TYILLIEGIGFSG 537
Score = 71.2 bits (173), Expect = 3e-10
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Frame = +2
Query: 41 LEILESHGE----PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGS 208
LE+ E E P+V SYN + S A +++ ++ QG PD +TYN LI
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462
Query: 209 LCSRGRLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPD 388
LC G + A+++L + P V++Y I++ N+A+++L M KG +P+
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522
Query: 389 MYTYNAITRGMCKEGTVDRAFEFVKNLPSM 478
TY + G+ G A E +L M
Sbjct: 523 ETTYILLIEGIGFSGLRAEAMELANSLHGM 552
Score = 68.9 bits (167), Expect = 1e-09
Identities = 36/117 (30%), Positives = 62/117 (52%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMG 481
L+ + G NE++ L+ M+ KG PD+ + +G + +A ++ L G
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 482 CEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVE 652
+PDV +YN L+ + + + R++ M SRG P+VVTY+I+I S C GK++
Sbjct: 135 -KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLD 190
>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
gi|550316702|gb|ERP48891.1| hypothetical protein
POPTR_0019s03630g [Populus trichocarpa]
Length = 586
Score = 298 bits (764), Expect = 8e-79
Identities = 141/207 (68%), Positives = 179/207 (86%), Gaps = 1/207 (0%)
Frame = +2
Query: 41 LEILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSR 220
+EILE HGEPDVF+YNAVISGFCK N+I+SA KV++RM+ +G S DVVTYNI+IG+ CS+
Sbjct: 131 MEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSK 190
Query: 221 GRLGLAMKMLDQLLEDN-CHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYT 397
G++ LA+K+ ++LL+DN C PT+ITYTILIEA I EGGI+E +KLLDEMLS+GL PD +T
Sbjct: 191 GKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFT 250
Query: 398 YNAITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMI 577
YN I RG+ KEG V++AFE V+ L S GC+PDVI+YN+LLRALL+QG+W +GE+L+ EM
Sbjct: 251 YNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMF 310
Query: 578 SRGCEPNVVTYSILISSLCHDGKVEDA 658
SRGCEPNVVTYSILISSLC DGK+E++
Sbjct: 311 SRGCEPNVVTYSILISSLCRDGKIEES 337
Score = 157 bits (398), Expect = 2e-36
Identities = 79/240 (32%), Positives = 131/240 (54%), Gaps = 35/240 (14%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
E+L EPD F+YN ++ G K +++ A ++V + ++GC PDV+TYNIL+ +L +G
Sbjct: 238 EMLSRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQG 297
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
+ K++D++ C P V+TY+ILI + +G I E++ L+ M KGL PD Y Y+
Sbjct: 298 KWYEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYD 357
Query: 404 AITRGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGR-------------- 541
+ C+EG +D A +F+ + S G PD+++YN ++ AL G
Sbjct: 358 PLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEV 417
Query: 542 ----------------WNDGER-----LVTEMISRGCEPNVVTYSILISSLCHDGKVEDA 658
W G+R ++++M+S G +P+ +TY+ LIS LC DG V++A
Sbjct: 418 GCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEA 477
Score = 135 bits (340), Expect = 1e-29
Identities = 64/192 (33%), Positives = 111/192 (57%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
PD + Y+ +I+ FC+ ++D A K ++ M + G PD+V YN ++ +LC G A+++
Sbjct: 351 PDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEI 410
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
+L E C P V +Y ++ A G A+ ++ +MLS G+ PD TYN++ +C+
Sbjct: 411 FGKLEEVGCPPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCR 470
Query: 428 EGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVT 607
+G VD A + ++ S +P+++SYN++L L R +D ++T MI GC+PN T
Sbjct: 471 DGMVDEAIGLLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETT 530
Query: 608 YSILISSLCHDG 643
Y++LI + G
Sbjct: 531 YTLLIEGIGFSG 542
Score = 127 bits (319), Expect = 3e-27
Identities = 60/202 (29%), Positives = 112/202 (55%)
Frame = +2
Query: 53 ESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLG 232
+++ +P + +Y +I ID K+++ M ++G PD TYN+++ L G++
Sbjct: 206 DNNCKPTLITYTILIEAHILEGGIDEGLKLLDEMLSRGLEPDTFTYNVIVRGLGKEGKVN 265
Query: 233 LAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAIT 412
A +++ L C P VITY IL+ A + +G E KL+DEM S+G P++ TY+ +
Sbjct: 266 QAFELVRTLNSRGCKPDVITYNILLRALLDQGKWYEGEKLMDEMFSRGCEPNVVTYSILI 325
Query: 413 RGMCKEGTVDRAFEFVKNLPSMGCEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCE 592
+C++G ++ + VK + G PD Y+ L+ A +G+ + + + MIS G
Sbjct: 326 SSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIKFLDYMISDGFL 385
Query: 593 PNVVTYSILISSLCHDGKVEDA 658
P++V Y+ ++++LC +G + A
Sbjct: 386 PDIVNYNTIMAALCKNGNSDHA 407
Score = 72.8 bits (177), Expect = 9e-11
Identities = 40/137 (29%), Positives = 71/137 (51%)
Frame = +2
Query: 68 PDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRGRLGLAMKM 247
P+V SYN ++S A ++++M + G PD +TYN LI LC G + A+ +
Sbjct: 421 PNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIGL 480
Query: 248 LDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCK 427
L +L P +++Y I++ I++A+++L M+ G +P+ TY + G+
Sbjct: 481 LADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIGF 540
Query: 428 EGTVDRAFEFVKNLPSM 478
G+ +A E +L SM
Sbjct: 541 SGSRAQAMELANSLYSM 557
Score = 71.6 bits (174), Expect = 2e-10
Identities = 40/128 (31%), Positives = 71/128 (55%)
Frame = +2
Query: 44 EILESHGEPDVFSYNAVISGFCKLNQIDSANKVVNRMRAQGCSPDVVTYNILIGSLCSRG 223
++L + +PD +YN++IS C+ +D A ++ M + P++V+YNI++ LC
Sbjct: 448 QMLSTGIDPDGITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYNIVLLGLCKVH 507
Query: 224 RLGLAMKMLDQLLEDNCHPTVITYTILIEATITEGGINEAMKLLDEMLSKGLRPDMYTYN 403
R+ A+++L ++E+ C P TYT+LIE G +AM+L + +Y+ N
Sbjct: 508 RIDDAIEVLTAMIENGCQPNETTYTLLIEGIGFSGSRAQAMELAN---------SLYSMN 558
Query: 404 AITRGMCK 427
AI+ G K
Sbjct: 559 AISEGSYK 566
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/117 (27%), Positives = 62/117 (52%)
Frame = +2
Query: 302 LIEATITEGGINEAMKLLDEMLSKGLRPDMYTYNAITRGMCKEGTVDRAFEFVKNLPSMG 481
L+ + G NE++ L+ M++KG +PD+ + +G +++A ++ L G
Sbjct: 79 LLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFFNSRNIEKATRVMEILEKHG 138
Query: 482 CEPDVISYNVLLRALLNQGRWNDGERLVTEMISRGCEPNVVTYSILISSLCHDGKVE 652
EPDV +YN ++ R ++++ M +G +VVTY+I+I + C GK++
Sbjct: 139 -EPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVTYNIMIGTFCSKGKID 194