BLASTX nr result
ID: Akebia23_contig00014585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00014585
(1241 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 340 7e-91
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s... 339 1e-90
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 338 4e-90
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 337 8e-90
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 323 9e-86
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 305 3e-80
ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Popu... 304 5e-80
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 303 8e-80
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 302 2e-79
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 302 2e-79
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 301 4e-79
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 301 5e-79
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 296 2e-77
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 295 3e-77
dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas] 288 3e-75
ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prun... 280 7e-73
gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Mor... 278 5e-72
ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6... 276 1e-71
gb|AFK40562.1| unknown [Lotus japonicus] 257 6e-66
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 253 2e-64
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 340 bits (872), Expect = 7e-91
Identities = 168/243 (69%), Positives = 200/243 (82%), Gaps = 7/243 (2%)
Frame = -2
Query: 1105 LEMGRVVENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 926
L G ++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDN
Sbjct: 58 LSEGMSRSQGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 117
Query: 925 VVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLK 746
VVTKSLK+LQVK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I LK
Sbjct: 118 VVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILK 177
Query: 745 KQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGD 575
K C++ ++KLK+AT E ISE+I K + EC+TQQIAEILR LVLD+E++EVRS+ +G+
Sbjct: 178 KTCVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGE 237
Query: 574 FENIPLGTLCFRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKW 407
F +IP+G +C+R +NK G+ P G +ASIPCGVCP + +CTPDGIISPKTC YY KW
Sbjct: 238 FSSIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297
Query: 406 LDF 398
LDF
Sbjct: 298 LDF 300
>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 339 bits (870), Expect = 1e-90
Identities = 166/233 (71%), Positives = 198/233 (84%), Gaps = 7/233 (3%)
Frame = -2
Query: 1075 AALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 896
++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQ
Sbjct: 7 SSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66
Query: 895 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 716
VK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I LKK C++ ++KL
Sbjct: 67 VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKL 126
Query: 715 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 545
K+AT E ISE+I K + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186
Query: 544 FRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+R +NK G+ P G +ASIPCGVCP + +CTPDGIISPKTC YY KWLDF
Sbjct: 187 YRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 338 bits (866), Expect = 4e-90
Identities = 165/233 (70%), Positives = 198/233 (84%), Gaps = 7/233 (3%)
Frame = -2
Query: 1075 AALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 896
++LKRKRPDT T SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQ
Sbjct: 7 SSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66
Query: 895 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 716
VK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I LK+ C++ ++KL
Sbjct: 67 VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKL 126
Query: 715 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 545
K+AT E ISE+I K + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186
Query: 544 FRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+R +NK G+ P G +ASIPCGVCP + +CTPDGIISPKTC YY KWLDF
Sbjct: 187 YRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWLDF 239
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 337 bits (863), Expect = 8e-90
Identities = 165/232 (71%), Positives = 197/232 (84%), Gaps = 7/232 (3%)
Frame = -2
Query: 1072 ALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQV 893
+LKRKRPDT SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLK+LQV
Sbjct: 8 SLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQV 67
Query: 892 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 713
K LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I LK+ C+K ++KLK
Sbjct: 68 KKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLK 127
Query: 712 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 542
+AT E ISE+I K + EC+TQQIAEILR LVLD+E++EVRS+ +G+F +IP+G +C+
Sbjct: 128 VATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCY 187
Query: 541 RRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
R +NK G+ PK G +ASIPCGVCP + +CTPDGIISPK+C YY KWLDF
Sbjct: 188 RCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWLDF 239
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 323 bits (828), Expect = 9e-86
Identities = 162/238 (68%), Positives = 196/238 (82%), Gaps = 7/238 (2%)
Frame = -2
Query: 1108 ILEMGRVVENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPD 929
IL +G +LKRKRPDT SQ L DAERVLYDLIRSKEDMGIWTRDMKRETNLPD
Sbjct: 86 ILILGMSRSQGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPD 145
Query: 928 NVVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTL 749
NVVTKSLK+LQVK LIKEVVNI++KG+KHYMAVEFEPSKELTGGAWYV+G L+TE+I L
Sbjct: 146 NVVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKIL 205
Query: 748 KKQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETG 578
K+ C+K ++KLK+AT E ISE+I K + EC+TQQIAEILR LVLD+E++EVRS+ +G
Sbjct: 206 KETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSG 265
Query: 577 DFENIPLGTLCFRRSNKMGV----PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYY 416
+F +IP+G +C+R +NK G+ PK G +ASIPCGVCP + +CTPDGIISPK+ V+Y
Sbjct: 266 EFSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSSVHY 323
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
Length = 233
Score = 305 bits (781), Expect = 3e-80
Identities = 149/231 (64%), Positives = 187/231 (80%), Gaps = 8/231 (3%)
Frame = -2
Query: 1066 KRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQV 893
KRKRPD+ S +L+D ER++YD+IRSK+DMGIWTRDMKRE NLPDN+VTKS+KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 892 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 713
K LIKEVVNI +KGKKH MAVEFEPSKE++GGAWY +G L+TEFI +K QCLKQI KLK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 712 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 542
+AT+E IS++I++ F V+ T QQI EI+R LVLD++++EV+S +G+F NIP+G +C+
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 541 RRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+ +K G PK+G LASIPCGVCP + C PDG+ISPKTCVYY KWLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVISPKTCVYYTKWLDF 233
>ref|XP_002324707.1| hypothetical protein POPTR_0018s04220g [Populus trichocarpa]
gi|222866141|gb|EEF03272.1| hypothetical protein
POPTR_0018s04220g [Populus trichocarpa]
Length = 239
Score = 304 bits (779), Expect = 5e-80
Identities = 142/236 (60%), Positives = 194/236 (82%), Gaps = 6/236 (2%)
Frame = -2
Query: 1087 VENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 908
++ ++LKRKRP+ + +Q+L++ ER+LYD+IRSK+D+GIWTRDMK+E LPDNVV KSL
Sbjct: 4 LQGPSSLKRKRPEVNSPAQSLTEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSL 63
Query: 907 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 728
K+LQVK LIKEVVNI+NKG+KH+MA EFEPSKE++GGAWY++G L+TEFI +LK+ C +Q
Sbjct: 64 KALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQ 123
Query: 727 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 557
I + +AT+EE++++I F+V+ T QQI EILRTL+LD+ ++EV+S G+F +IP
Sbjct: 124 IERRGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPF 183
Query: 556 GTLCFRRSNKMGV---PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
G +C++ +K+G+ PK+G LASIPCGVCP + +CTPDGIISPKTCVYY KWLDF
Sbjct: 184 GEVCYKYISKVGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWLDF 239
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Citrus
sinensis]
Length = 233
Score = 303 bits (777), Expect = 8e-80
Identities = 148/231 (64%), Positives = 187/231 (80%), Gaps = 8/231 (3%)
Frame = -2
Query: 1066 KRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQV 893
KRKRP++ S +L+D ER++YD+IRSK+DMGIWTRDMKRE NLPDN+VTKS+KSLQ
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 892 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 713
K LIKEVVNI +KGKKH MAVEFEPSKE++GGAWY +G L+TEFI +K QCLKQI KLK
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 712 IATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 542
+AT+E IS++I++ F V+ T QQI EI+R LVLD++++EV+S +G+F NIP+G +C+
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 541 RRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+ +K G PK+G LASIPCGVCP + CTPDG+ISPKTCVYY WLDF
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVISPKTCVYYTTWLDF 233
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X1 [Citrus sinensis]
Length = 252
Score = 302 bits (774), Expect = 2e-79
Identities = 153/259 (59%), Positives = 196/259 (75%), Gaps = 9/259 (3%)
Frame = -2
Query: 1147 YSFIIYWIISLNYILEMGRVVENSAALKRKRPDTKTVSQTLSDAERVLYDLIRS-KEDMG 971
YSF +++ L + S KRKRPD+ S +L+D ER++YD+IRS K+DMG
Sbjct: 3 YSFTDLYLLGL---------AKGSGMSKRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMG 53
Query: 970 IWTRDMKRE--TNLPDNVVTKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGG 797
IWTRDMKRE NLPDN+VTKS+KSLQ K LIKEVVNI NKGKKH MAVEFEPSKE++GG
Sbjct: 54 IWTRDMKRELKVNLPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGG 113
Query: 796 AWYVDGKLNTEFITTLKKQCLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRT 626
AWY +G L+TEFI +K QCLKQI KLK+AT+E IS++I++ F V+ T QQI EI+R
Sbjct: 114 AWYSEGSLDTEFIKVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRA 173
Query: 625 LVLDDEVVEVRSTETGDFENIPLGTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECT 455
+VLD++++EV+S +G+F NIP+G +C++ +K G PK+G AS+PCGVCP + CT
Sbjct: 174 VVLDNQIMEVKSNGSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCT 233
Query: 454 PDGIISPKTCVYYNKWLDF 398
PDG+ISPKTCVYY KWLDF
Sbjct: 234 PDGVISPKTCVYYTKWLDF 252
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 302 bits (773), Expect = 2e-79
Identities = 143/236 (60%), Positives = 190/236 (80%), Gaps = 6/236 (2%)
Frame = -2
Query: 1087 VENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 908
V+ ++LKRKRP+ + Q+L++ ER+LYD+IRSK+D+GIWTRDMK+E LPDNVV KSL
Sbjct: 56 VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSL 115
Query: 907 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 728
K+L+VK LIKEVVNI+NKG+KH+MA EFEPSKE++GGAWY++G L+TEFI +L++ C +Q
Sbjct: 116 KALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLRQLCKRQ 175
Query: 727 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 557
I K +AT+EE++++I F+V+ T QQI EILRTL+LD+ ++EV+S G+F +IP
Sbjct: 176 IEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILRTLILDNAIMEVKSNGMGEFASIPF 235
Query: 556 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
G +C+R +K G PK+G LASIPCGVCP + CTPDGIISPKTCVYY KWLDF
Sbjct: 236 GKVCYRYISKGALGGEPKAGALASIPCGVCPRISHCTPDGIISPKTCVYYQKWLDF 291
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Glycine
max]
Length = 239
Score = 301 bits (771), Expect = 4e-79
Identities = 150/236 (63%), Positives = 184/236 (77%), Gaps = 6/236 (2%)
Frame = -2
Query: 1087 VENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 908
++ S++LKRKR D V+ +L+D ERVLY+LI SK+DMGIWT DMKRETNLPD++V KSL
Sbjct: 4 LQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 907 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 728
K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGG WY G+L+T+FI +K CLK
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKY 123
Query: 727 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 557
I + K+AT + + E RK F+VE TTQQI EILRTLVLDDE+VEV+ST GDF ++P+
Sbjct: 124 IFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPV 183
Query: 556 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
G +C+R +K G K G +ASIPCGVCP + CTPDGIISP+TCVYY KWLDF
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like isoform
X2 [Citrus sinensis]
Length = 234
Score = 301 bits (770), Expect = 5e-79
Identities = 148/232 (63%), Positives = 187/232 (80%), Gaps = 9/232 (3%)
Frame = -2
Query: 1066 KRKRPDTKTVSQTLSDAERVLYDLIRS-KEDMGIWTRDMKRE--TNLPDNVVTKSLKSLQ 896
KRKRPD+ S +L+D ER++YD+IRS K+DMGIWTRDMKRE NLPDN+VTKS+KSLQ
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 895 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 716
K LIKEVVNI NKGKKH MAVEFEPSKE++GGAWY +G L+TEFI +K QCLKQI KL
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 715 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 545
K+AT+E IS++I++ F V+ T QQI EI+R +VLD++++EV+S +G+F NIP+G +C
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 544 FRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
++ +K G PK+G AS+PCGVCP + CTPDG+ISPKTCVYY KWLDF
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVISPKTCVYYTKWLDF 234
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 296 bits (757), Expect = 2e-77
Identities = 142/236 (60%), Positives = 188/236 (79%), Gaps = 6/236 (2%)
Frame = -2
Query: 1087 VENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 908
+ S ALKRK+P++ + +Q+L++ E LY++I SK+DMGIWTRDMKRETNLPDNVV KSL
Sbjct: 1 MNRSQALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSL 60
Query: 907 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 728
K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGGAWYV+G L+TEFI LK+ C KQ
Sbjct: 61 KVLQAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQ 120
Query: 727 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 557
+ KLK+AT+E I+++I++ F+ E T QQI EI++ LVLD+ ++EV+S +F IP+
Sbjct: 121 VLKLKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPI 180
Query: 556 GTLCFR---RSNKMGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
G +C++ + + G P+ G +ASIPCGVCP + +CTPDGIISP+TCVYY+KWLDF
Sbjct: 181 GKVCYKCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWLDF 236
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 295 bits (755), Expect = 3e-77
Identities = 147/236 (62%), Positives = 181/236 (76%), Gaps = 6/236 (2%)
Frame = -2
Query: 1087 VENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSL 908
++ S++LKRKR D VS +++D ERVLY+LI SK+DMGIWT DMKRETNLPD++V KSL
Sbjct: 4 LQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSL 63
Query: 907 KSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQ 728
K LQ K LIKEVVNI+NKG+KHYMA EFEPSKE+TGG WY G L+T+FI +K+ CLK
Sbjct: 64 KLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVCLKC 123
Query: 727 INKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPL 557
I + K+AT + + E RK F+VE T QQI EILR LVLDDE+ EV+ST GDF ++P+
Sbjct: 124 IFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSSVPV 183
Query: 556 GTLCFRRSNK---MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
G +C+R +K G K G +ASIPCGVCP + CTPDGIISP+TCVYY KWLDF
Sbjct: 184 GRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF 239
>dbj|BAJ53222.1| JHL06P13.1 [Jatropha curcas]
Length = 235
Score = 288 bits (737), Expect = 3e-75
Identities = 140/228 (61%), Positives = 178/228 (78%), Gaps = 5/228 (2%)
Frame = -2
Query: 1066 KRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQVKG 887
KRK+P++ + +Q+L++ E+ LY+ IRSK+DMGIWTRDMKRETNLPD VV KSLK LQ K
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 886 LIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLKIA 707
LIKEVVNI+NKG+K+YMA EFEPSKE+TGG WYV+G L+T FI LK QC KQI KLK+A
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 706 TVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCFRR 536
TVE +++ I + +V T QQI EIL+ LVLD++V EV+S G+F +IP+G +C++
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187
Query: 535 SNK--MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
K G PK G +ASIPCGVCP + CTP+GIISP+TCVYY KWL+F
Sbjct: 188 IGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIISPQTCVYYGKWLEF 235
>ref|XP_007208807.1| hypothetical protein PRUPE_ppa024742mg [Prunus persica]
gi|462404542|gb|EMJ10006.1| hypothetical protein
PRUPE_ppa024742mg [Prunus persica]
Length = 236
Score = 280 bits (717), Expect = 7e-73
Identities = 135/232 (58%), Positives = 180/232 (77%), Gaps = 6/232 (2%)
Frame = -2
Query: 1075 AALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQ 896
+ALKRK+PD+ + S++L++ E+++Y +IRSK+DMGIWTRDMK+E NLPDN+V KS+KSLQ
Sbjct: 5 SALKRKQPDSSSPSESLTEHEKIVYSVIRSKQDMGIWTRDMKKEANLPDNLVGKSIKSLQ 64
Query: 895 VKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKL 716
K LIKEVVN+++KG+KHYMA EFEPSKELTGG WY +G L+ +I+ +K K I +L
Sbjct: 65 AKNLIKEVVNVQSKGRKHYMAAEFEPSKELTGGDWYSNGTLDKYYISCVKDGFAKIIYQL 124
Query: 715 KIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 545
K+AT+E IS+ ++K F T QQI EILR LVLD V EV+ST G+F + P+G +C
Sbjct: 125 KVATLEGISDEVKKSGIFKTSFTKQQIEEILRVLVLDKRVTEVKSTGMGEFGSFPVGKVC 184
Query: 544 FRRSNKMG---VPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
++ ++K G PK G +ASIPCGVCP + +CTPDGIISP+TCVY+ KWLDF
Sbjct: 185 YKSTSKGGSKREPKVGAMASIPCGVCPRISQCTPDGIISPRTCVYFTKWLDF 236
>gb|EXB67305.1| DNA-directed RNA polymerase III subunit RPC6 [Morus notabilis]
Length = 238
Score = 278 bits (710), Expect = 5e-72
Identities = 136/239 (56%), Positives = 186/239 (77%), Gaps = 5/239 (2%)
Frame = -2
Query: 1099 MGRVVENSAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 920
M R+ E S+ LKRK+PD+++ +L++ ER++Y++IRSK+DMGIW +DMKR +PDNV
Sbjct: 1 MSRLQEPSS-LKRKQPDSRSPLDSLTEHERIIYNVIRSKQDMGIWMQDMKRVAKVPDNVA 59
Query: 919 TKSLKSLQVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQ 740
K+LKSL+ K LIKEVVNI+ +GKKHY+A EFEP+ E+TGGAWY +GK++ I LK Q
Sbjct: 60 NKALKSLETKKLIKEVVNIQKRGKKHYVAAEFEPATEITGGAWYSNGKMDFVVINILKDQ 119
Query: 739 CLKQINKLKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFE 569
CLK I K ++AT+E I +AIRK +VE TT QI E++R LVLD+EVVEV+S G+F+
Sbjct: 120 CLKWIYKQRVATLEGILDAIRKSGISNVELTTVQIEELVRALVLDNEVVEVKSNGMGEFD 179
Query: 568 NIPLGTLCFRRSNK--MGVPKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+IP+G +C++ ++K G PK G ++SIPCGVCP + +CTPDGIISPKTC YY++WLDF
Sbjct: 180 SIPVGKVCYKSTSKGSRGDPKIGAMSSIPCGVCPRISDCTPDGIISPKTCKYYSQWLDF 238
>ref|XP_007023168.1| DNA-directed RNA polymerase III subunit rpc6, putative isoform 1
[Theobroma cacao] gi|590615245|ref|XP_007023169.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778534|gb|EOY25790.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao] gi|508778535|gb|EOY25791.1|
DNA-directed RNA polymerase III subunit rpc6, putative
isoform 1 [Theobroma cacao]
Length = 237
Score = 276 bits (707), Expect = 1e-71
Identities = 135/231 (58%), Positives = 181/231 (78%), Gaps = 6/231 (2%)
Frame = -2
Query: 1072 ALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSLQV 893
ALKRKRP S +L++ ER+++D+I+ K+DMGI RDMKRE NLPDN+VTK LKSL
Sbjct: 9 ALKRKRPGA--TSDSLTEHERIVHDVIQGKQDMGISQRDMKREINLPDNLVTKCLKSLLA 66
Query: 892 KGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINKLK 713
K LIKEV NI+N+G+KH+++ EFEPS E+TGGAWYV+G L+TE+I LK+QC ++I LK
Sbjct: 67 KNLIKEVKNIQNRGRKHFISAEFEPSNEITGGAWYVEGSLDTEYINVLKEQCWRKIYGLK 126
Query: 712 IATVEEISEAIRKFSV---ECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLCF 542
+AT+E +++AI++ +V E + QQI EI++ LVLD+EV+EV+S+ TG+F +IP+G +C+
Sbjct: 127 VATLEGVTDAIKRSNVSQIELSKQQIEEIVKALVLDNEVMEVKSSGTGEFASIPVGKVCY 186
Query: 541 RRSNKMGV---PKSGGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLDF 398
+ K G PK G +ASIPCGVCP + CTPDGIISPKTCVYY KWLDF
Sbjct: 187 KCIGKRGYGGEPKVGTMASIPCGVCPQISHCTPDGIISPKTCVYYKKWLDF 237
>gb|AFK40562.1| unknown [Lotus japonicus]
Length = 232
Score = 257 bits (657), Expect = 6e-66
Identities = 130/233 (55%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Frame = -2
Query: 1078 SAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSL 899
S++LKRKRPD L+D E V+Y LI SKE+MGIW D+KRET +PDN+V K +KSL
Sbjct: 7 SSSLKRKRPD-------LTDGEDVVYKLIHSKENMGIWIADIKRETKMPDNMVKKCIKSL 59
Query: 898 QVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINK 719
Q K L+KEVVNI+++GKK YMAV+FEPSKELTGG WY DGK +T+FI K LK + K
Sbjct: 60 QDKNLVKEVVNIQSRGKKRYMAVDFEPSKELTGGDWYTDGKFDTDFINAAKDVFLKYVFK 119
Query: 718 LKIATVEEISEAIRK---FSVECTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTL 548
K+AT + + E RK FSV+ T QQ+ EILR LVLDDE++EV ST +F ++P G +
Sbjct: 120 QKVATCDGVLEWTRKNAVFSVDVTAQQVEEILRALVLDDEIIEVESTGKEEFASVPKGKI 179
Query: 547 CFR-RSNKMGVPKSGGLASIPCGVCPWLYECTP--DGIISPKTCVYYNKWLDF 398
C++ + G K+G +ASIPCGVCP + +C P DG ISP+TC Y+ KWLDF
Sbjct: 180 CYKSKGGVRGEKKAGAMASIPCGVCPRIIKCAPDADGFISPRTCDYFEKWLDF 232
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like isoform
1 [Solanum lycopersicum] gi|460400960|ref|XP_004245998.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like isoform 2 [Solanum lycopersicum]
Length = 237
Score = 253 bits (645), Expect = 2e-64
Identities = 127/232 (54%), Positives = 176/232 (75%), Gaps = 6/232 (2%)
Frame = -2
Query: 1078 SAALKRKRPDTKTVSQTLSDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKSL 899
+AALKRKRPD+ T Q L DAE V+ ++++SK++ G+W D+K+E N+ +V K L SL
Sbjct: 7 AAALKRKRPDSST--QGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDKCLTSL 64
Query: 898 QVKGLIKEVVNIKNKGKKHYMAVEFEPSKELTGGAWYVDGKLNTEFITTLKKQCLKQINK 719
K LIK+V +I+NK KK+YMAVE+EPS+ELTGGAWY +GKL+ EFIT L++ CLK I
Sbjct: 65 VKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCLKVIGM 124
Query: 718 LKIATVEEISEAIRKFSVE--CTTQQIAEILRTLVLDDEVVEVRSTETGDFENIPLGTLC 545
+K+ATVE I + ++K V CT+QQ+ EIL ++VLDD ++EV+ST G++ +IP+G++C
Sbjct: 125 MKVATVEGIHDFLKKRKVVECCTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSIPIGSVC 184
Query: 544 FRRSNKMGV---PKS-GGLASIPCGVCPWLYECTPDGIISPKTCVYYNKWLD 401
+R + +GV PK+ G +ASIPCG CP + CTPDGIISPKTCVY+ KWLD
Sbjct: 185 YRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLD 234