BLASTX nr result
ID: Akebia23_contig00014120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00014120
(814 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241... 94 6e-17
emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera] 90 1e-15
ref|XP_002520518.1| protein with unknown function [Ricinus commu... 89 2e-15
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr... 87 6e-15
ref|XP_007016334.1| Transcription initiation factor IIA subunit ... 87 7e-15
gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus... 86 1e-14
ref|XP_006350788.1| PREDICTED: transcription initiation factor I... 86 2e-14
ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutr... 86 2e-14
ref|XP_004241212.1| PREDICTED: transcription initiation factor I... 86 2e-14
gb|EXC10718.1| Transcription initiation factor IIA large subunit... 85 3e-14
gb|EPS64961.1| hypothetical protein M569_09817, partial [Genlise... 85 3e-14
dbj|BAJ34634.1| unnamed protein product [Thellungiella halophila] 84 5e-14
ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutr... 84 5e-14
ref|XP_006305101.1| hypothetical protein CARUB_v10009468mg [Caps... 84 6e-14
ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arab... 84 8e-14
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu... 83 1e-13
ref|XP_003537974.1| PREDICTED: transcription initiation factor I... 83 1e-13
ref|XP_003539601.1| PREDICTED: transcription initiation factor I... 83 1e-13
ref|XP_002298340.1| transcription factor IIA large subunit famil... 83 1e-13
gb|AAL32801.1| similar to TFIIA [Arabidopsis thaliana] gi|300236... 82 2e-13
>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
gi|297746029|emb|CBI16085.3| unnamed protein product
[Vitis vinifera]
Length = 393
Score = 94.0 bits (232), Expect = 6e-17
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 2/96 (2%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGS-STGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ-NTQHLVL 331
DYN VNTPA +D+QAG+ + G Q +V + NTQHLVL
Sbjct: 294 DYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNENDDDDLDDVEQGEELNTQHLVL 353
Query: 332 AQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
AQF+KVTRTKSKWKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 354 AQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANG 389
Score = 63.9 bits (154), Expect = 7e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGD 116
QP TQDFF + SGKRKREDF +H GYIPQQDGAGD
Sbjct: 186 QPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGD 223
>emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera]
Length = 630
Score = 89.7 bits (221), Expect = 1e-15
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGS-STGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ-NTQHLVL 331
DYN VNTPA +D+QAG+ + G Q +V + NTQHLVL
Sbjct: 370 DYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNENDDDDLDDVXQGEELNTQHLVL 429
Query: 332 AQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSK 430
AQF+KVTRTKSKWKCTLKDGI+ I+NKDILF+K
Sbjct: 430 AQFDKVTRTKSKWKCTLKDGIMHINNKDILFNK 462
Score = 63.9 bits (154), Expect = 7e-08
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGD 116
QP TQDFF + SGKRKREDF +H GYIPQQDGAGD
Sbjct: 186 QPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGD 223
>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
gi|223540360|gb|EEF41931.1| protein with unknown
function [Ricinus communis]
Length = 383
Score = 89.0 bits (219), Expect = 2e-15
Identities = 50/97 (51%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGS-STGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ--NTQHLV 328
DYN NTPA +DLQA + + PQ +V + NTQHLV
Sbjct: 283 DYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDDVDQGEDMNTQHLV 342
Query: 329 LAQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
LAQF+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 343 LAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 379
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGD 116
QP TQDFFT SGKRKREDFA ++ GG+IPQQDGAGD
Sbjct: 185 QPLTQDFFTGASGKRKREDFAAQYNNGGFIPQQDGAGD 222
>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
gi|568870376|ref|XP_006488381.1| PREDICTED:
transcription initiation factor IIA subunit 1-like
[Citrus sinensis] gi|557526833|gb|ESR38139.1|
hypothetical protein CICLE_v10028561mg [Citrus
clementina]
Length = 406
Score = 87.4 bits (215), Expect = 6e-15
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGS-STGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLA 334
DYN VNTPA +D+QA + + Q + NTQHLVLA
Sbjct: 308 DYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDDDELDDVDQGEELNTQHLVLA 367
Query: 335 QFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
QF+KVTRTKS+WKC LKDGI+ I+NKDILF+KA+G
Sbjct: 368 QFDKVTRTKSRWKCALKDGIMHINNKDILFNKATG 402
Score = 65.1 bits (157), Expect = 3e-08
Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGY-IPQQDGAGDA 119
QP TQDFFT+ +GKRKREDF +H GGY IPQQDGAGDA
Sbjct: 202 QPLTQDFFTMSAGKRKREDFPAQYHNGGYNIPQQDGAGDA 241
>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
gi|508786697|gb|EOY33953.1| Transcription initiation
factor IIA subunit 1 [Theobroma cacao]
Length = 393
Score = 87.0 bits (214), Expect = 7e-15
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTG-PQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ-NTQHLVL 331
DYN VNTPA +DLQA + Q + + NTQHLVL
Sbjct: 294 DYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDEPLNEDDDDDELDDVDQGEELNTQHLVL 353
Query: 332 AQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
AQF+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 354 AQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 389
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/40 (77%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFH-GGGYIPQQDGAGDA 119
QP TQDFF + SGKRKREDF +H GGGYIPQQDGAGDA
Sbjct: 185 QPLTQDFFMMSSGKRKREDFTTQYHNGGGYIPQQDGAGDA 224
>gb|EYU45954.1| hypothetical protein MIMGU_mgv1a007767mg [Mimulus guttatus]
Length = 396
Score = 86.3 bits (212), Expect = 1e-14
Identities = 45/94 (47%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
DYN VNTP +++ A + Q +V NT HLVLAQ
Sbjct: 299 DYNIVNTPMPNEMLAATPAPVQNDVIDDDEDEPLNEDDDDDGDELDEGEDLNTTHLVLAQ 358
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 359 FDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 392
Score = 60.1 bits (144), Expect = 1e-06
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGD 116
Q TTQDFF V SGKRKR++F P + GGYIPQQDGAGD
Sbjct: 209 QQTTQDFF-VASGKRKRDNFPPQYQAGGYIPQQDGAGD 245
>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum tuberosum]
Length = 403
Score = 85.9 bits (211), Expect = 2e-14
Identities = 46/94 (48%), Positives = 55/94 (58%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
DYN VNTPA +D+QA + NT HLVLAQ
Sbjct: 306 DYNIVNTPAPNDMQAPTPAPALQNDDIDDDDEPLNEDDDDDLDDVDQGEDLNTAHLVLAQ 365
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 366 FDKVTRTKSRWKCTLKDGIMHINNKDILFNKANG 399
Score = 65.5 bits (158), Expect = 2e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGDA 119
QP TQDFF +GKRKREDF P +H GGYIPQQDGA D+
Sbjct: 209 QPMTQDFFMNSAGKRKREDFPPQYHNGGYIPQQDGAADS 247
>ref|XP_006417799.1| hypothetical protein EUTSA_v10007947mg [Eutrema salsugineum]
gi|557095570|gb|ESQ36152.1| hypothetical protein
EUTSA_v10007947mg [Eutrema salsugineum]
Length = 375
Score = 85.5 bits (210), Expect = 2e-14
Identities = 43/94 (45%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
D+N TPA +++QA + Q ++ NTQHLVLAQ
Sbjct: 278 DFNEGRTPAPNEIQASTPVAAQNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQ 337
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
FEKVTRTKS+WKC LKDGI+ I++KDILF+KA+G
Sbjct: 338 FEKVTRTKSRWKCNLKDGIMHINDKDILFNKATG 371
>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
[Solanum lycopersicum]
Length = 401
Score = 85.5 bits (210), Expect = 2e-14
Identities = 47/94 (50%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
DYN VNTPA +D+QA + P NT HLVLAQ
Sbjct: 305 DYNIVNTPAPNDMQA-PTPAPLQNDDIDDDDEPLNEDDDDELDDVDQGEDLNTAHLVLAQ 363
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 364 FDKVTRTKSRWKCTLKDGIMHINNKDILFNKANG 397
Score = 65.5 bits (158), Expect = 2e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGDA 119
QP TQDFF +GKRKREDF P +H GGYIPQQDGA D+
Sbjct: 208 QPMTQDFFMNSTGKRKREDFPPQYHNGGYIPQQDGAADS 246
>gb|EXC10718.1| Transcription initiation factor IIA large subunit [Morus notabilis]
Length = 404
Score = 85.1 bits (209), Expect = 3e-14
Identities = 47/93 (50%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ--NTQHLVL 331
DYN NTPA +DL AG+ P + NTQHLVL
Sbjct: 291 DYNIANTPAPNDLPAGTPAIPAPNDVGEDDDDEPPLNENDDDELDDIDQGEELNTQHLVL 350
Query: 332 AQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSK 430
AQF+KVTRTKS+WKCTLKDGI+RI+NKDILF+K
Sbjct: 351 AQFDKVTRTKSRWKCTLKDGIMRINNKDILFNK 383
Score = 58.5 bits (140), Expect = 3e-06
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGD 116
QP TQDFF PSGKRKR++ + GG++PQQDGAGD
Sbjct: 188 QPPTQDFFMPPSGKRKRDELPSQYQAGGFLPQQDGAGD 225
>gb|EPS64961.1| hypothetical protein M569_09817, partial [Genlisea aurea]
Length = 135
Score = 85.1 bits (209), Expect = 3e-14
Identities = 45/94 (47%), Positives = 55/94 (58%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
DYN VNTP ++LQA + Q + NT HLVLAQ
Sbjct: 38 DYNIVNTPLPNELQAATPAPIQNDPGDDEDDEPLNEDDDDDVDEVDQGEDLNTTHLVLAQ 97
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC LKDGI+ I+NKDILF+KA+G
Sbjct: 98 FDKVTRTKSRWKCALKDGIMHINNKDILFNKATG 131
>dbj|BAJ34634.1| unnamed protein product [Thellungiella halophila]
Length = 330
Score = 84.3 bits (207), Expect = 5e-14
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
D+N TPA +++QA + Q ++ NTQHLVLAQ
Sbjct: 233 DFNDGRTPAPNEIQASTPVAAQNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQ 292
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC LKDGI+ I++KDILF+KA+G
Sbjct: 293 FDKVTRTKSRWKCNLKDGIMHINDKDILFNKAAG 326
>ref|XP_006417801.1| hypothetical protein EUTSA_v10007946mg [Eutrema salsugineum]
gi|312282103|dbj|BAJ33917.1| unnamed protein product
[Thellungiella halophila] gi|557095572|gb|ESQ36154.1|
hypothetical protein EUTSA_v10007946mg [Eutrema
salsugineum]
Length = 375
Score = 84.3 bits (207), Expect = 5e-14
Identities = 42/94 (44%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
D+N TPA +++QA + Q ++ NTQHLVLAQ
Sbjct: 278 DFNDGRTPAPNEIQASTPVAAQNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQ 337
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC LKDGI+ I++KDILF+KA+G
Sbjct: 338 FDKVTRTKSRWKCNLKDGIMHINDKDILFNKAAG 371
>ref|XP_006305101.1| hypothetical protein CARUB_v10009468mg [Capsella rubella]
gi|482573812|gb|EOA37999.1| hypothetical protein
CARUB_v10009468mg [Capsella rubella]
Length = 375
Score = 84.0 bits (206), Expect = 6e-14
Identities = 41/94 (43%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
D+N TPA +++Q + Q ++ NTQHLVLAQ
Sbjct: 278 DFNEARTPAPNEIQTSTPVAVQNDIIEDDEELLNEDDDDDELDDLDSGEDMNTQHLVLAQ 337
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC+LKDGI+ I++KDILF+KA+G
Sbjct: 338 FDKVTRTKSRWKCSLKDGIMHINDKDILFNKATG 371
>ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arabidopsis lyrata subsp.
lyrata] gi|297335491|gb|EFH65908.1| hypothetical protein
ARALYDRAFT_470771 [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 83.6 bits (205), Expect = 8e-14
Identities = 41/94 (43%), Positives = 55/94 (58%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
D+N TPA +++Q + Q ++ NTQHLVLAQ
Sbjct: 276 DFNEARTPAPNEIQTSTPVAVQNDIVEDDEELLNEDDDDDELDDLDSGEDMNTQHLVLAQ 335
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC LKDGI+ I++KDILF+KA+G
Sbjct: 336 FDKVTRTKSRWKCNLKDGIMHINDKDILFNKATG 369
>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
gi|550348134|gb|ERP66111.1| hypothetical protein
POPTR_0001s25120g [Populus trichocarpa]
Length = 405
Score = 83.2 bits (204), Expect = 1e-13
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSST--GPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ-NTQHLV 328
DYN NTPA +DLQA + +V + NTQHL+
Sbjct: 305 DYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLI 364
Query: 329 LAQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
LAQF+KVTRTKS+WKCTLKDG++ I+N+DILF+KA+G
Sbjct: 365 LAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATG 401
>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoform X1 [Glycine max]
Length = 392
Score = 83.2 bits (204), Expect = 1e-13
Identities = 46/98 (46%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGP----QIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHL 325
DYN NTPA ++ A S+ P +++ QNT HL
Sbjct: 292 DYNIANTPAPSEVPA-STPAPIAQNEVDEEDDDDEPPLNENDDDDLDDLDQGEDQNTHHL 350
Query: 326 VLAQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
VLAQF+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 351 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 388
Score = 58.5 bits (140), Expect = 3e-06
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGDA 119
QP TQDFF + SGKRKR++ A ++ GGYIPQQDGAGDA
Sbjct: 189 QPLTQDFF-MSSGKRKRDEIASQYNAGGYIPQQDGAGDA 226
>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
isoformX2 [Glycine max]
Length = 389
Score = 83.2 bits (204), Expect = 1e-13
Identities = 46/98 (46%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGS----STGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHL 325
DYN NTPA D+ A + + E QNT HL
Sbjct: 288 DYNIANTPASSDVPASTPAPVAQNEVDEEDDDDDEPLNENDDDDDLDDLDQGEDQNTHHL 347
Query: 326 VLAQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
VLAQF+KVTRTKS+WKCTLKDGI+ I+NKDILF+KA+G
Sbjct: 348 VLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATG 385
Score = 58.5 bits (140), Expect = 3e-06
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +3
Query: 3 QPTTQDFFTVPSGKRKREDFAPHFHGGGYIPQQDGAGDA 119
QP TQDFF + SGKRKR++ A ++ GGYIPQQDGAGDA
Sbjct: 185 QPLTQDFF-MSSGKRKRDEIASQYNAGGYIPQQDGAGDA 222
>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
trichocarpa] gi|222845598|gb|EEE83145.1| transcription
factor IIA large subunit family protein [Populus
trichocarpa]
Length = 409
Score = 83.2 bits (204), Expect = 1e-13
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSST--GPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQ-NTQHLV 328
DYN NTPA +DLQA + +V + NTQHL+
Sbjct: 309 DYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLI 368
Query: 329 LAQFEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
LAQF+KVTRTKS+WKCTLKDG++ I+N+DILF+KA+G
Sbjct: 369 LAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATG 405
>gb|AAL32801.1| similar to TFIIA [Arabidopsis thaliana] gi|30023680|gb|AAP13373.1|
At1g07480 [Arabidopsis thaliana]
Length = 218
Score = 82.4 bits (202), Expect = 2e-13
Identities = 40/94 (42%), Positives = 56/94 (59%)
Frame = +2
Query: 158 DYNTVNTPAGHDLQAGSSTGPQIEVXXXXXXXXXXXXXXXXXXXXXXXXXQNTQHLVLAQ 337
++N TPA +++Q + Q ++ NTQHLVLAQ
Sbjct: 121 EFNEARTPAPNEIQTSTPVAVQNDIIEDDEELLNEDDDDDELDDLESGEDMNTQHLVLAQ 180
Query: 338 FEKVTRTKSKWKCTLKDGIIRIDNKDILFSKASG 439
F+KVTRTKS+WKC+LKDGI+ I++KDILF+KA+G
Sbjct: 181 FDKVTRTKSRWKCSLKDGIMHINDKDILFNKAAG 214