BLASTX nr result

ID: Akebia23_contig00012973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00012973
         (307 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]       54   2e-07

>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
          Length = 168

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 23/56 (41%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +2

Query: 59  ISSVIVHEQETFIKDRKIL----VVNKCIDTR*RTNLRGMVCKINLEKAYDHVTRD 214
           + SVI   Q +F+  R+IL    + N+C+D+R ++ + G++CK+++EKAYDHV  D
Sbjct: 26  LDSVISESQNSFVGGRQILDSVLIANECLDSRIKSGIPGLICKLDIEKAYDHVNWD 81



 Score = 26.9 bits (58), Expect(2) = 2e-07
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +3

Query: 3  GPIYKIIAKVLVDMLKVVI 59
          G IYK++AKVL + LK+V+
Sbjct: 8  GSIYKLLAKVLANRLKLVL 26


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