BLASTX nr result

ID: Akebia23_contig00009445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00009445
         (328 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004302111.1| PREDICTED: tRNA-splicing endonuclease subuni...    58   1e-06
ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subuni...    58   2e-06
ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citr...    58   2e-06
ref|XP_007015492.1| Splicing endonuclease 2, putative [Theobroma...    56   5e-06

>ref|XP_004302111.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Fragaria
           vesca subsp. vesca]
          Length = 246

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 31/37 (83%)
 Frame = +3

Query: 3   NGNDIVSPSCLEKYTVDKRTITRWSPKQCREDLTVVK 113
           NG+   SPSCLE YT+ +RTITRWSP+QCRED T+V+
Sbjct: 201 NGHGADSPSCLEMYTIRERTITRWSPEQCREDHTMVE 237


>ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like isoform
           X1 [Citrus sinensis]
          Length = 301

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +3

Query: 3   NGNDIVSPSCLEKYTVDKRTITRWSPKQCREDLTVVKGGTK 125
           NG    +PSCLE+Y V++RTI+RWSP+QCRED   V  G K
Sbjct: 261 NGQGTATPSCLEQYAVEERTISRWSPEQCREDPATVANGIK 301


>ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citrus clementina]
           gi|568869948|ref|XP_006488176.1| PREDICTED:
           tRNA-splicing endonuclease subunit Sen2-1-like isoform
           X2 [Citrus sinensis] gi|568869950|ref|XP_006488177.1|
           PREDICTED: tRNA-splicing endonuclease subunit
           Sen2-1-like isoform X3 [Citrus sinensis]
           gi|557526587|gb|ESR37893.1| hypothetical protein
           CICLE_v10029956mg [Citrus clementina]
          Length = 243

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = +3

Query: 3   NGNDIVSPSCLEKYTVDKRTITRWSPKQCREDLTVVKGGTK 125
           NG    +PSCLE+Y V++RTI+RWSP+QCRED   V  G K
Sbjct: 203 NGQGTATPSCLEQYAVEERTISRWSPEQCREDPATVANGIK 243


>ref|XP_007015492.1| Splicing endonuclease 2, putative [Theobroma cacao]
           gi|508785855|gb|EOY33111.1| Splicing endonuclease 2,
           putative [Theobroma cacao]
          Length = 240

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +3

Query: 3   NGNDIVSPSCLEKYTVDKRTITRWSPKQCREDLTVVK 113
           N +  +SPSCLE YTV+++TITRW+P+QCRED  VV+
Sbjct: 203 NCHGAISPSCLEHYTVEEQTITRWNPEQCREDQAVVR 239


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