BLASTX nr result

ID: Akebia23_contig00009095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00009095
         (412 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006409204.1| hypothetical protein EUTSA_v10022812mg [Eutr...    57   3e-06
ref|XP_006409203.1| hypothetical protein EUTSA_v10022812mg [Eutr...    57   3e-06
ref|NP_568522.1| RNA recognition motif (RRM)-containing protein ...    56   6e-06
ref|XP_006284322.1| hypothetical protein CARUB_v10005495mg [Caps...    56   6e-06
ref|XP_002868391.1| RNA recognition motif-containing protein [Ar...    56   6e-06
gb|EXB31241.1| hypothetical protein L484_014722 [Morus notabilis]      55   8e-06

>ref|XP_006409204.1| hypothetical protein EUTSA_v10022812mg [Eutrema salsugineum]
           gi|557110366|gb|ESQ50657.1| hypothetical protein
           EUTSA_v10022812mg [Eutrema salsugineum]
          Length = 262

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVS 272
           YVTAGA WFSGAF+KVA+VGQ+ASSKT+EK +++
Sbjct: 216 YVTAGAAWFSGAFSKVARVGQIASSKTKEKFNLA 249


>ref|XP_006409203.1| hypothetical protein EUTSA_v10022812mg [Eutrema salsugineum]
           gi|557110365|gb|ESQ50656.1| hypothetical protein
           EUTSA_v10022812mg [Eutrema salsugineum]
          Length = 260

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVS 272
           YVTAGA WFSGAF+KVA+VGQ+ASSKT+EK +++
Sbjct: 214 YVTAGAAWFSGAFSKVARVGQIASSKTKEKFNLA 247


>ref|NP_568522.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
           thaliana] gi|21593919|gb|AAM65884.1| unknown
           [Arabidopsis thaliana] gi|26450493|dbj|BAC42360.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973403|gb|AAO64026.1| putative RRM-containing
           protein [Arabidopsis thaliana]
           gi|332006499|gb|AED93882.1| RNA recognition motif
           (RRM)-containing protein [Arabidopsis thaliana]
          Length = 267

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVS 272
           YVTAGA WFSGAF+KVA+VGQVA SKT+EK +++
Sbjct: 221 YVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLA 254


>ref|XP_006284322.1| hypothetical protein CARUB_v10005495mg [Capsella rubella]
           gi|482553027|gb|EOA17220.1| hypothetical protein
           CARUB_v10005495mg [Capsella rubella]
          Length = 268

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVS 272
           YVTAGA WFSGAF+KVA+VGQVA SKT+EK +++
Sbjct: 222 YVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLA 255


>ref|XP_002868391.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314227|gb|EFH44650.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 267

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVS 272
           YVTAGA WFSGAF+KVA+VGQVA SKT+EK +++
Sbjct: 221 YVTAGAAWFSGAFSKVARVGQVAGSKTKEKFNLA 254


>gb|EXB31241.1| hypothetical protein L484_014722 [Morus notabilis]
          Length = 450

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/47 (55%), Positives = 34/47 (72%)
 Frame = +3

Query: 171 YVTAGAHWFSGAFNKVAKVGQVASSKTREKISVSWIRLDCNRTIRVD 311
           YVTAGA W +GAF+KVA+ GQVA +KTREK +++   L    T+ VD
Sbjct: 397 YVTAGAAWLNGAFSKVARAGQVAGTKTREKFNLAVSNLTAKLTLAVD 443


Top