BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00004337
         (3251 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1473   0.0  
ref|XP_007034151.1| DNA topoisomerase, type IA, core [Theobroma ...  1457   0.0  
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...  1447   0.0  
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1419   0.0  
ref|XP_007225297.1| hypothetical protein PRUPE_ppa001274mg [Prun...  1417   0.0  
ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1417   0.0  
ref|XP_002321105.1| DNA topoisomerase family protein [Populus tr...  1415   0.0  
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1403   0.0  
ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1400   0.0  
ref|XP_007163790.1| hypothetical protein PHAVU_001G264300g [Phas...  1382   0.0  
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1362   0.0  
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1360   0.0  
ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsi...  1358   0.0  
ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like i...  1358   0.0  
ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1353   0.0  
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...  1348   0.0  
ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [S...  1348   0.0  
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g...  1347   0.0  
ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis t...  1346   0.0  
ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutr...  1346   0.0  

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score = 1473 bits (3813), Expect = 0.0
 Identities = 704/861 (81%), Positives = 759/861 (88%), Gaps = 7/861 (0%)
 Frame = -3

Query: 3102 VLMVAEKPXXXXXXXXXXSHGRMSTRRG--STDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            +L VAEKP          S G MSTRRG  ST+VHEF+G F G +AQY+VTSVIGHVFSV
Sbjct: 32   ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 91

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP+KYQDW VTDPLDLF API K ESNPKA IRRHLS EAR CGHLVLWLDCDREGENI
Sbjct: 92   DFPAKYQDWTVTDPLDLFQAPILKAESNPKAHIRRHLSQEARDCGHLVLWLDCDREGENI 151

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            CFEV+ECTGFH  EARRRVYRARFSSVTEKDILKA+DNLV+PNEDEA AVDARQEIDLKV
Sbjct: 152  CFEVVECTGFHGNEARRRVYRARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKV 211

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFW+LHP++ 
Sbjct: 212  GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYIT 271

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
             NGYEL+LEW+R+KLFD DVAVMFQ +V+EDG +EVTD+S K+ESK RPSGLNTVN+LKV
Sbjct: 272  HNGYELQLEWERNKLFDLDVAVMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKV 331

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP+SFDFKSTL    NNPTWGDYV  
Sbjct: 332  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSTLGMQTNNPTWGDYVQK 391

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL  GFH+PRSGTD GDHPPITPMR+A E+MLG+DAWKLYQ++CQHFIGTVSPDCKYVR 
Sbjct: 392  LLDDGFHRPRSGTDAGDHPPITPMRAANEDMLGNDAWKLYQYVCQHFIGTVSPDCKYVRN 451

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
            KVE S GGE+F CIGQHV  KGFTSIMPW+AVNEKNLP F KGEK+++ KVELYEG TSP
Sbjct: 452  KVEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSP 511

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGR+LVPT LGI+LIRGYQC
Sbjct: 512  PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTALGISLIRGYQC 571

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            IDPDLCLPDIR FIEQQITL+AKGQ DH  VVEHVL+QF +K+ YFVKQIENMDALFEAQ
Sbjct: 572  IDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENMDALFEAQ 631

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPLADSGR LSKCGKC+RYMKYIS QP R+YCGTCEEVYYLPQ GTIKLYKEL CPLDN
Sbjct: 632  FSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKELTCPLDN 691

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELLIFSL GPE KSFPLCPYCYN+PPFEGIDTLFG  KT ++GKLGKGAGMPCFLCPHP
Sbjct: 692  FELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKTSSTGKLGKGAGMPCFLCPHP 751

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC HS+IAQGVCACPEC GTLVLDPVSAPKWRLYCNMCNCLV+LPQGAH+ISTTRDRCPE
Sbjct: 752  TCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVYLPQGAHKISTTRDRCPE 811

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK-----XXXXXXX 604
            C+STI+EVDFNK TTPL DG+TL+ GCILCDELLHSLVE+KHGKSFFK            
Sbjct: 812  CESTILEVDFNKKTTPLLDGSTLYTGCILCDELLHSLVEMKHGKSFFKRMGSRGRGRGSG 871

Query: 603  XXXXXXXXXXGKLEDPKMSFR 541
                      GK +DPKMSFR
Sbjct: 872  RGGFRGRGRGGKWDDPKMSFR 892


>ref|XP_007034151.1| DNA topoisomerase, type IA, core [Theobroma cacao]
            gi|508713180|gb|EOY05077.1| DNA topoisomerase, type IA,
            core [Theobroma cacao]
          Length = 868

 Score = 1457 bits (3773), Expect = 0.0
 Identities = 693/866 (80%), Positives = 754/866 (87%), Gaps = 6/866 (0%)
 Frame = -3

Query: 3120 MAPPPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGH 2941
            M+PPPKVLMVAEKP          SHG+MSTRRGST+VHEF+G FLG +A Y+VTSVIGH
Sbjct: 1    MSPPPKVLMVAEKPSIALSIASVLSHGKMSTRRGSTEVHEFNGTFLGFNAHYKVTSVIGH 60

Query: 2940 VFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDRE 2761
            VFSVDFP+ YQDW VT+PLDLF A + KTESNPKA I RHLS EARGCG+LVLWLDCDRE
Sbjct: 61   VFSVDFPASYQDWNVTNPLDLFQASVIKTESNPKAHISRHLSQEARGCGYLVLWLDCDRE 120

Query: 2760 GENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEI 2581
            GENICFEVIECTGFH  EA++RVYRARFSSVTEKDI KA+DNLV+PN  EA AVDARQEI
Sbjct: 121  GENICFEVIECTGFHMNEAKKRVYRARFSSVTEKDISKAMDNLVEPNRHEALAVDARQEI 180

Query: 2580 DLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLH 2401
            DLKVGVAFTRFQT YFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFW+L 
Sbjct: 181  DLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALR 240

Query: 2400 PHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVN 2221
            P++I+NGY+L+LEW R KLFD DVA+MFQK+V EDG LEV DVS K+ESKGRPSGLNTVN
Sbjct: 241  PYIIQNGYDLQLEWKRQKLFDIDVAIMFQKLVTEDGILEVIDVSEKQESKGRPSGLNTVN 300

Query: 2220 MLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGD 2041
            +LKVASSALG GPQ AMQLAERLYTQGFISYPRTESTAYPASFDFK TL    NN  WGD
Sbjct: 301  LLKVASSALGFGPQTAMQLAERLYTQGFISYPRTESTAYPASFDFKGTLNVIANNSLWGD 360

Query: 2040 YVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCK 1861
            YV  LLA G+HKPRSGTD GDHPPITPM SATE++LG DAW LYQ++CQHFIGTVSPDCK
Sbjct: 361  YVQRLLAEGYHKPRSGTDAGDHPPITPMHSATEDILGKDAWSLYQYVCQHFIGTVSPDCK 420

Query: 1860 YVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEG 1681
            YVR+KVE   GGE F+CIGQHVTA+GFT IMPW+A+NEKNLP FTKGEK+++ KVELYEG
Sbjct: 421  YVRRKVEFLVGGEYFHCIGQHVTAQGFTYIMPWLAINEKNLPQFTKGEKIEVSKVELYEG 480

Query: 1680 NTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIR 1501
             TSPPDYLSESELISLME+N IGTDASIPVHINNICERN+VQVQ GR+LVPT LGITLIR
Sbjct: 481  ETSPPDYLSESELISLMERNRIGTDASIPVHINNICERNYVQVQGGRKLVPTALGITLIR 540

Query: 1500 GYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDAL 1321
            GYQCIDPDLCLPDIR FIE QITL+AKGQA+H HVV+HVL+QF +K+SYFV+QIENMDAL
Sbjct: 541  GYQCIDPDLCLPDIRSFIEHQITLVAKGQANHSHVVQHVLQQFKQKFSYFVQQIENMDAL 600

Query: 1320 FEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVC 1141
            FEAQFSPLADSGR LSKCGKC+RYMKYIS QP RL+CGTCEEVY+LPQ GTIKLYKEL C
Sbjct: 601  FEAQFSPLADSGRALSKCGKCLRYMKYISTQPPRLFCGTCEEVYHLPQKGTIKLYKELTC 660

Query: 1140 PLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFL 961
            PLDNFELLIFS+ GPE KSFPLCPYCYN+PPFEG+DTLFG  + G+SGKLGKGAGMPCFL
Sbjct: 661  PLDNFELLIFSMPGPEGKSFPLCPYCYNSPPFEGMDTLFGATRIGSSGKLGKGAGMPCFL 720

Query: 960  CPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRD 781
            CPHPTCRHSV+AQGVCACPEC GTLVLDPVSAPKWRLYCN CNCLV LP+GAHRI+TTR+
Sbjct: 721  CPHPTCRHSVVAQGVCACPECSGTLVLDPVSAPKWRLYCNKCNCLVLLPEGAHRIATTRE 780

Query: 780  RCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK------XX 619
            RC ECDSTIIEVDFNK TTPL DGATLH GCILCDELLHS VEVKHGKSF +        
Sbjct: 781  RCAECDSTIIEVDFNKKTTPLEDGATLHTGCILCDELLHSFVEVKHGKSFSRGLGGRGRG 840

Query: 618  XXXXXXXXXXXXXXXGKLEDPKMSFR 541
                           GK  DPKMSFR
Sbjct: 841  RGTRRGGYRGRGRAAGKQVDPKMSFR 866


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score = 1447 bits (3747), Expect = 0.0
 Identities = 684/861 (79%), Positives = 747/861 (86%), Gaps = 4/861 (0%)
 Frame = -3

Query: 3111 PPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFS 2932
            PP VLMVAEKP          SHG+MS+++G T+VHEFDG+FLG  A Y+VTSVIGH+FS
Sbjct: 3    PPVVLMVAEKPSIALSIASALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHIFS 62

Query: 2931 VDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGEN 2752
            VDFP KYQDW   DP+DLF API K ESNPK  IRRHLS EARGCGHLVLWLDCDREGEN
Sbjct: 63   VDFPQKYQDWTANDPMDLFQAPIVKAESNPKVHIRRHLSQEARGCGHLVLWLDCDREGEN 122

Query: 2751 ICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLK 2572
            ICFEVIECTGFH  ++RRRVYRARFSSV EKDILKA+DNLV PN DEA AVDARQEIDLK
Sbjct: 123  ICFEVIECTGFHLNDSRRRVYRARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEIDLK 182

Query: 2571 VGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHL 2392
            VGVAFTRFQTS+FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFWSL PHL
Sbjct: 183  VGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQIATFKPEKFWSLRPHL 242

Query: 2391 IKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLK 2212
            I +GY+L+LEW+R +LFD DVA+MFQK V++DG LEV D+S K+E+KGRPSGLNTVN+LK
Sbjct: 243  IIDGYQLQLEWERHRLFDLDVALMFQKQVLQDGILEVIDISQKQETKGRPSGLNTVNLLK 302

Query: 2211 VASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVH 2032
            VASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP+SFDFKS L   LNN  WGD V 
Sbjct: 303  VASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKSILSTLLNNSIWGDSVR 362

Query: 2031 DLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVR 1852
             LL  G+HKPR GTD GDHPPITP+R ATE+MLG DAW+LYQ++CQHFIG+VSPDCKYVR
Sbjct: 363  RLLVEGYHKPRLGTDAGDHPPITPIRLATEDMLGKDAWRLYQYVCQHFIGSVSPDCKYVR 422

Query: 1851 KKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTS 1672
             KVE S GGE F+CIGQHV  +GFTSIMPW+AV EKNLP   KGEK+++L++EL EG T+
Sbjct: 423  TKVEFSVGGEFFHCIGQHVIVEGFTSIMPWLAVTEKNLPQLVKGEKIEVLRMELLEGKTT 482

Query: 1671 PPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQ 1492
            PPDYL+ESELISLMEKNGIGTDASIPVHINNICERN+VQVQAGRRL PT LGITLIRGYQ
Sbjct: 483  PPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLAPTILGITLIRGYQ 542

Query: 1491 CIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEA 1312
            CIDPDLCLPDIR FIEQQITL+AKGQADH  VV+HVL+QF +K++YFVKQI+NMDALFEA
Sbjct: 543  CIDPDLCLPDIRSFIEQQITLVAKGQADHSRVVQHVLQQFKQKFTYFVKQIDNMDALFEA 602

Query: 1311 QFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLD 1132
            QFS L DSGR LSKCGKC+RYMKYIS QP RLYCGTCEEVYYLPQ GTIKLYKEL CPLD
Sbjct: 603  QFSQLVDSGRALSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGTIKLYKELTCPLD 662

Query: 1131 NFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPH 952
            NFELLIFS+ GPE K+FPLCPYCYNNPPFEG+DTLFG  K G  GKLGKGAGMPCFLCPH
Sbjct: 663  NFELLIFSMAGPEGKTFPLCPYCYNNPPFEGVDTLFGASKNGNFGKLGKGAGMPCFLCPH 722

Query: 951  PTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCP 772
            PTCRHS+IAQGVCACPEC GTLVLDPVSAPKWRLYCNMCNCLV LPQGAHRI+TTR+RCP
Sbjct: 723  PTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRERCP 782

Query: 771  ECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFKXXXXXXXXXXX 592
            ECDSTIIEVDFNKNTTPL DGATLH+GCILCD+LLHSLVEVKHGKSFFK           
Sbjct: 783  ECDSTIIEVDFNKNTTPLEDGATLHIGCILCDDLLHSLVEVKHGKSFFKRLGAGRRGRGA 842

Query: 591  XXXXXXGKLE----DPKMSFR 541
                  G+      DPKMSFR
Sbjct: 843  GRGRGRGRSSGRRGDPKMSFR 863


>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
            vesca]
          Length = 862

 Score = 1419 bits (3674), Expect = 0.0
 Identities = 673/857 (78%), Positives = 757/857 (88%), Gaps = 2/857 (0%)
 Frame = -3

Query: 3105 KVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSVD 2926
            KVLMVAEKP          S G+MSTR+ STDVHEF+G F G H Q++VTSVIGHVFS+D
Sbjct: 5    KVLMVAEKPSIALSIANVLSRGQMSTRKASTDVHEFEGTFRGYHVQFKVTSVIGHVFSLD 64

Query: 2925 FPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENIC 2746
            FP  YQ+W VTDPLDLF AP++K E+NPKA IRRHLS EARG G+LVLWLDCDREGENIC
Sbjct: 65   FPETYQNWTVTDPLDLFQAPVRKAEANPKAHIRRHLSQEARGFGNLVLWLDCDREGENIC 124

Query: 2745 FEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKVG 2566
            FEVI+C G H  E +R+VYRARFSSVTEKDILKA+DNLV+PN+DEA AVDARQEIDLKVG
Sbjct: 125  FEVIDCIG-HTNETKRKVYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDLKVG 183

Query: 2565 VAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLIK 2386
            VAFTRFQTS+FQGKYGNLD+RVISYGPCQTPTLGFCVQRYLQI +FKPEKFWS+ P++++
Sbjct: 184  VAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSVRPYILQ 243

Query: 2385 NGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKVA 2206
            +GYEL+L+W+R+KLFD DVAVMFQK+V++DG  EVT++S K+ESKGRPSGLNTVN+LKVA
Sbjct: 244  SGYELQLDWERNKLFDVDVAVMFQKLVMDDGIAEVTEISEKQESKGRPSGLNTVNLLKVA 303

Query: 2205 SSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHDL 2026
            SSALG GPQ+AMQ+AERLYTQGFISYPRTESTAYP+SFDFK TL A +NNP WG YV  L
Sbjct: 304  SSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFKGTLGAQVNNPVWGSYVQRL 363

Query: 2025 LAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRKK 1846
            L+ G+ KPRSGTDVGDHPP+TP+RSATE+MLG+DAW+LY+++C+HFIGTVSPDCKYVR K
Sbjct: 364  LSDGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYVCKHFIGTVSPDCKYVRTK 423

Query: 1845 VELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSPP 1666
            VE S GGE+F+C+GQ V  KGFTSIMPW+AVNEKNLP FTKGEK+++ +V+L+EG TSPP
Sbjct: 424  VEFSIGGEIFHCVGQRVLVKGFTSIMPWLAVNEKNLPQFTKGEKIEVARVDLHEGMTSPP 483

Query: 1665 DYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQCI 1486
            +YLSESELISLMEKNGIGTDASI VHINNICERN+VQVQAGR+LVPT LGITLIRGYQCI
Sbjct: 484  EYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCI 543

Query: 1485 DPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQF 1306
            DPDLCLPDIR FIEQQITL+AKGQADHF VV+HVL+QF +KYSYFVKQIENMDALFEAQF
Sbjct: 544  DPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQF 603

Query: 1305 SPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDNF 1126
            SPLADSGRVLSKCGKC+RYMK+IS QP RLYC TCEEVYYLPQ GTIKLYKEL CPLDNF
Sbjct: 604  SPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGTIKLYKELTCPLDNF 663

Query: 1125 ELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHPT 946
            ELLI S+ GP+ KSF LCPYCYN+PPFEGI+TLFG  K+G+SGKLGKGAGMPCFLCPHPT
Sbjct: 664  ELLICSMPGPDGKSFSLCPYCYNSPPFEGINTLFGAAKSGSSGKLGKGAGMPCFLCPHPT 723

Query: 945  CRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPEC 766
            CRHS+I QGVCACPEC GTLVLDPVSAPKWRL CNMCN LV LPQGAH+ISTT DRCPEC
Sbjct: 724  CRHSLITQGVCACPECTGTLVLDPVSAPKWRLCCNMCNFLVLLPQGAHQISTTPDRCPEC 783

Query: 765  DSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK--XXXXXXXXXXX 592
            DSTIIEVDFNK TTPL DGATL+ GCILCDELLHSLVE+K+GKSFF+             
Sbjct: 784  DSTIIEVDFNKKTTPLEDGATLYSGCILCDELLHSLVEMKYGKSFFRGSRGRGRGSRRGR 843

Query: 591  XXXXXXGKLEDPKMSFR 541
                  GK+ DPKMSFR
Sbjct: 844  GRGRGTGKMVDPKMSFR 860


>ref|XP_007225297.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
            gi|462422233|gb|EMJ26496.1| hypothetical protein
            PRUPE_ppa001274mg [Prunus persica]
          Length = 866

 Score = 1417 bits (3669), Expect = 0.0
 Identities = 673/861 (78%), Positives = 755/861 (87%), Gaps = 6/861 (0%)
 Frame = -3

Query: 3105 KVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSVD 2926
            KV+MVAEKP          S G+MSTR+ STDVHEF+G+FLG H  ++VTSVIGHVFSVD
Sbjct: 5    KVIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHVFSVD 64

Query: 2925 FPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENIC 2746
            FP KYQ+W  TDPLDLF APIQKTE+NPKA IRRHLS EARG G+LVLWLDCDREGENIC
Sbjct: 65   FPEKYQNWTTTDPLDLFQAPIQKTEANPKAHIRRHLSQEARGYGNLVLWLDCDREGENIC 124

Query: 2745 FEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKVG 2566
            FEV++C G H+ E RRR+YRARFSSVTEKDILKA+DNLV+PN+DEA AVDARQEIDLKVG
Sbjct: 125  FEVMDCIG-HSNETRRRIYRARFSSVTEKDILKAMDNLVEPNKDEALAVDARQEIDLKVG 183

Query: 2565 VAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLIK 2386
            VAFTRFQTS+FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFW++ P++++
Sbjct: 184  VAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWAVRPYIMQ 243

Query: 2385 NGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKVA 2206
             GYEL+LEW+R+KLFD+DVAVMFQK+V+EDG LEVT++  K+ESK RPSGLNTVN+LKVA
Sbjct: 244  KGYELQLEWERNKLFDYDVAVMFQKLVMEDGILEVTEIVEKQESKSRPSGLNTVNLLKVA 303

Query: 2205 SSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHDL 2026
            SSALG GPQ+AMQ+AERLYTQGFISYPRTESTAYP+SFDF+ TL A +NNPTWG YV  L
Sbjct: 304  SSALGFGPQMAMQVAERLYTQGFISYPRTESTAYPSSFDFRGTLGAQVNNPTWGSYVQRL 363

Query: 2025 LAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRKK 1846
            LA G+ KPRSGTDVGDHPP+TP+RSATE+MLG+DAW+LY++IC HF+GTVSPDCKYVR K
Sbjct: 364  LADGYQKPRSGTDVGDHPPVTPLRSATEDMLGNDAWRLYEYICTHFMGTVSPDCKYVRTK 423

Query: 1845 VELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSPP 1666
            VE S GGE F+C+G  V  KGFTSIMPW+AV EKNLP FTKGEK+++ +V+L+EG TSPP
Sbjct: 424  VEFSIGGEFFHCVGHRVLVKGFTSIMPWLAVTEKNLPQFTKGEKIEVSQVDLHEGMTSPP 483

Query: 1665 DYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQCI 1486
            DYLSESELISLMEKNGIGTDASI VHINNICERN+VQV AGR+L PT LGITLIRGYQCI
Sbjct: 484  DYLSESELISLMEKNGIGTDASISVHINNICERNYVQVLAGRKLGPTALGITLIRGYQCI 543

Query: 1485 DPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQF 1306
            DPDLCLPDIR FIEQQITL+AKGQADHF VV+HVL+QF +KYSYFVKQIENMDALFEAQF
Sbjct: 544  DPDLCLPDIRSFIEQQITLVAKGQADHFRVVQHVLQQFRQKYSYFVKQIENMDALFEAQF 603

Query: 1305 SPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDNF 1126
            SPLADSGRVLSKCGKC+RYMK+IS QP RLYC TCEEVYYLPQ G+IKLYKEL CPLDNF
Sbjct: 604  SPLADSGRVLSKCGKCLRYMKHISTQPSRLYCNTCEEVYYLPQKGSIKLYKELTCPLDNF 663

Query: 1125 ELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHPT 946
            ELLIFS+ GP+ KSFPLCPYCYN+PPFEGIDTLFG +K+G S +LGKGAGMPCFLCPHPT
Sbjct: 664  ELLIFSMPGPDGKSFPLCPYCYNSPPFEGIDTLFGAVKSGPSSQLGKGAGMPCFLCPHPT 723

Query: 945  CRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPEC 766
            CRHS+IAQGVCACPEC GTLVLDPVSAPKWRL CNMCN LV LP+GAH+ISTTR+RCPEC
Sbjct: 724  CRHSLIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNFLVLLPEGAHQISTTRERCPEC 783

Query: 765  DSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK------XXXXXXX 604
            DSTI+EVDFNK TTPL +G TL+ GCILCDELLHSLVE+K+GKSFFK             
Sbjct: 784  DSTILEVDFNKKTTPLENGETLYTGCILCDELLHSLVEMKYGKSFFKRLGGRGRGRGSRR 843

Query: 603  XXXXXXXXXXGKLEDPKMSFR 541
                      GK  DPKMSFR
Sbjct: 844  GGYRGRGRGTGKKVDPKMSFR 864


>ref|XP_006492984.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X3 [Citrus
            sinensis]
          Length = 867

 Score = 1417 bits (3667), Expect = 0.0
 Identities = 668/863 (77%), Positives = 746/863 (86%), Gaps = 6/863 (0%)
 Frame = -3

Query: 3111 PPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFS 2932
            P KVLMVAEKP          S G++ TR+ ST+VHEFDG+FLG HA  +VTSV+GHVF 
Sbjct: 3    PLKVLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHVFR 62

Query: 2931 VDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGEN 2752
            +DFP  YQDW  ++PLDLF AP+ K ESN K  I RHL+ EARGCGHLVLWLDCDREGEN
Sbjct: 63   LDFPPAYQDWNASNPLDLFQAPVHKAESNRKVHICRHLNQEARGCGHLVLWLDCDREGEN 122

Query: 2751 ICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLK 2572
            ICFEVIECTGF   +ARR+V+RARFSSVTEKDILKA+ NLV+PN +EA AVDARQEIDLK
Sbjct: 123  ICFEVIECTGFQVNDARRKVHRARFSSVTEKDILKAMGNLVEPNRNEALAVDARQEIDLK 182

Query: 2571 VGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHL 2392
            VGVAFTRFQT+YFQGKYGNLDSR ISYGPCQTPTLGFCVQRYLQITSFKPEKFW+LHP+L
Sbjct: 183  VGVAFTRFQTTYFQGKYGNLDSRFISYGPCQTPTLGFCVQRYLQITSFKPEKFWTLHPYL 242

Query: 2391 IKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLK 2212
            ++NGYEL+LEW+R KLFDFDVA MFQK+V++D  LEV D+S K+ESK RPSGLNTVN+LK
Sbjct: 243  VQNGYELKLEWERQKLFDFDVATMFQKLVMQDRILEVIDISEKQESKVRPSGLNTVNLLK 302

Query: 2211 VASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVH 2032
            VASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP+SFDF+ TL A  NNP WGDYV 
Sbjct: 303  VASSALGYGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLSALANNPVWGDYVE 362

Query: 2031 DLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVR 1852
             LLA G+ KPRSGTD GDHPPITPMRSATE+MLG DAW+LY ++CQHF+GTVSPDCKY+R
Sbjct: 363  RLLAEGYAKPRSGTDAGDHPPITPMRSATEDMLGKDAWRLYSYVCQHFLGTVSPDCKYIR 422

Query: 1851 KKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTS 1672
             KV+ S G E F+C+GQHVT +GFT IMPW+A+NEK +P FTK EK+++ KVEL+EGNT 
Sbjct: 423  TKVKFSMGAEFFHCVGQHVTVQGFTYIMPWLAINEKKIPQFTKEEKIEVSKVELHEGNTV 482

Query: 1671 PPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQ 1492
            PP+YLSESELI+LMEKNGIGTDASIPVHINNICERN+VQVQAGR+L PTTLGITLIRGYQ
Sbjct: 483  PPEYLSESELITLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLAPTTLGITLIRGYQ 542

Query: 1491 CIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEA 1312
            CIDPDLCLPDIR FIEQQITL+AKGQADH  VV+HVL+QF +KYSYFVKQIENMDALFEA
Sbjct: 543  CIDPDLCLPDIRSFIEQQITLVAKGQADHSGVVQHVLQQFRQKYSYFVKQIENMDALFEA 602

Query: 1311 QFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLD 1132
            QFSPL++SGRVLSKCGKC+RYMKYIS+QP RLYC TCE+VY LPQ GT+KLYKEL CPLD
Sbjct: 603  QFSPLSNSGRVLSKCGKCLRYMKYISMQPSRLYCSTCEDVYNLPQRGTLKLYKELTCPLD 662

Query: 1131 NFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPH 952
            NFELLIFS+ GPE KSFPLCP+CYNNPPFEGIDTL+G   TG+ GKLGKGAGMPCFLCPH
Sbjct: 663  NFELLIFSMAGPEGKSFPLCPFCYNNPPFEGIDTLYGTTTTGSFGKLGKGAGMPCFLCPH 722

Query: 951  PTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCP 772
            P CRHS+IAQGVCACPEC+GTLVLDPVSAPKWRLYCNMCNCLV LPQGAHRI+TT+++CP
Sbjct: 723  PACRHSMIAQGVCACPECNGTLVLDPVSAPKWRLYCNMCNCLVSLPQGAHRIATTQEQCP 782

Query: 771  ECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK------XXXXX 610
            EC S IIE+DFNK TTPL DGATLH GCILCDELLHSL+EVKHGKSFFK           
Sbjct: 783  ECGSKIIEIDFNKKTTPLDDGATLHTGCILCDELLHSLIEVKHGKSFFKRLGGRGRGRGA 842

Query: 609  XXXXXXXXXXXXGKLEDPKMSFR 541
                        GK  DPKMSFR
Sbjct: 843  GRGAFKGRGWGTGKGVDPKMSFR 865


>ref|XP_002321105.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222861878|gb|EEE99420.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 837

 Score = 1415 bits (3664), Expect = 0.0
 Identities = 669/835 (80%), Positives = 735/835 (88%), Gaps = 3/835 (0%)
 Frame = -3

Query: 3036 MSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSVDFPSKYQDWGVTDPLDLFNAPIQK 2857
            M +R+G+T+VHEF+G+F G  A ++VTSVIGHVFSVDFP+KYQDW  TDP DLF API K
Sbjct: 1    MHSRKGTTEVHEFEGMFNGFRAYFKVTSVIGHVFSVDFPAKYQDWAATDPADLFQAPIHK 60

Query: 2856 TESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENICFEVIECTGFHAKEARRRVYRARF 2677
             E+NPKA I RHLS EARGC HLVLWLDCDREGENICFEVI+CTGF A + RR+VYRARF
Sbjct: 61   AEANPKAHICRHLSQEARGCNHLVLWLDCDREGENICFEVIQCTGFQANDDRRKVYRARF 120

Query: 2676 SSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDSRVI 2497
            SSVTEKDILKA++ LV+PNE EA AVDARQEIDLKVGVAFTRFQTS+FQGKYGNLDSRVI
Sbjct: 121  SSVTEKDILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVI 180

Query: 2496 SYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLIKNGYELRLEWDRSKLFDFDVAVMF 2317
            SYGPCQTPTLGFCVQRYLQIT+FKPEKFW+L PH++ +GYEL+LEW+R KLFD DVA+MF
Sbjct: 181  SYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLDVALMF 240

Query: 2316 QKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKVASSALGIGPQVAMQLAERLYTQGF 2137
            QK+V++D  LEVTD+S K+ESKGRP GLNTVN+LK+ASSALG GPQV MQLAERLY QGF
Sbjct: 241  QKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIASSALGFGPQVTMQLAERLYIQGF 300

Query: 2136 ISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHDLLAVGFHKPRSGTDVGDHPPITPM 1957
            ISYPRTESTAYP+SFDFK TL A  NNP WGDYV  LL+ G+HKP+SG D GDHPPITPM
Sbjct: 301  ISYPRTESTAYPSSFDFKGTLGALANNPMWGDYVQGLLSGGYHKPQSGKDAGDHPPITPM 360

Query: 1956 RSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRKKVELSAGGELFNCIGQHVTAKGFT 1777
            RSA E+MLG DAW+LYQ++CQHF+GTVSPDCKY R KVE S GGE F+CIG HVT KGFT
Sbjct: 361  RSANEDMLGRDAWRLYQYVCQHFLGTVSPDCKYTRTKVEFSIGGEFFHCIGLHVTVKGFT 420

Query: 1776 SIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSPPDYLSESELISLMEKNGIGTDASI 1597
            SIMPW+AV+EKNLP F KG+K+++ KVEL+EG T PPDYLSESELISLMEKNGIGTDASI
Sbjct: 421  SIMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNGIGTDASI 480

Query: 1596 PVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQCIDPDLCLPDIRGFIEQQITLIAKG 1417
             VHINNICERN+VQVQAGR+LVPT LGITLIRGYQCIDPDLCLPDIRGFIEQQITL+AKG
Sbjct: 481  SVHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLVAKG 540

Query: 1416 QADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCVRYMKYI 1237
            +ADH  VV+HVL QF RKYSYFVKQI+NMDALFEAQFSPLADSGR  SKCGKC+RYMKYI
Sbjct: 541  EADHSCVVQHVLEQFKRKYSYFVKQIDNMDALFEAQFSPLADSGRAFSKCGKCLRYMKYI 600

Query: 1236 SIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDNFELLIFSLIGPEAKSFPLCPYCYN 1057
            S QP RLYCGTCEEVYYLPQ GTIKLYKEL CPLDNFELLIF++ GPE KSFPLCP CYN
Sbjct: 601  SSQPSRLYCGTCEEVYYLPQKGTIKLYKELTCPLDNFELLIFAMAGPEGKSFPLCPLCYN 660

Query: 1056 NPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHPTCRHSVIAQGVCACPECDGTLVLD 877
            +PPFEGID LFG  KTG+SG LGKGAGMPCFLCPHPTCRHS+IAQGVCACPEC+GTLVLD
Sbjct: 661  SPPFEGIDALFGASKTGSSGMLGKGAGMPCFLCPHPTCRHSLIAQGVCACPECNGTLVLD 720

Query: 876  PVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPECDSTIIEVDFNKNTTPLSDGATLH 697
            P+SAPKWRLYCNMCNCLV LPQGAHRISTTR++CPECDSTIIEVDFNKNTTPL DGATLH
Sbjct: 721  PISAPKWRLYCNMCNCLVLLPQGAHRISTTREQCPECDSTIIEVDFNKNTTPLEDGATLH 780

Query: 696  VGCILCDELLHSLVEVKHGKSFFKXXXXXXXXXXXXXXXXXGK---LEDPKMSFR 541
            VGCILCD LLHSLVEVKHGKSFFK                 G+     DPKMSFR
Sbjct: 781  VGCILCDNLLHSLVEVKHGKSFFKRAGKWARARGRGAYRGRGRGLGKMDPKMSFR 835


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score = 1403 bits (3632), Expect = 0.0
 Identities = 670/865 (77%), Positives = 745/865 (86%), Gaps = 5/865 (0%)
 Frame = -3

Query: 3120 MAPP-PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIG 2944
            MAPP PKVLMVAEKP          SH +M TRRGST+VHEFDG FLG  A +RVTSVIG
Sbjct: 1    MAPPIPKVLMVAEKPSIALSIASVLSHAQMFTRRGSTEVHEFDGKFLGSPAHFRVTSVIG 60

Query: 2943 HVFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDR 2764
            HVFSVDFP KYQDW  TDPLDLF A + K ESNPKA I RHLS EARGC +LVLWLDCDR
Sbjct: 61   HVFSVDFPGKYQDWAATDPLDLFQAQVIKNESNPKAHICRHLSQEARGCRYLVLWLDCDR 120

Query: 2763 EGENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQE 2584
            EGENICFEVI+ TGFH  +     YRARFSSVTEKD++KALDNLV PN DEA AVDARQE
Sbjct: 121  EGENICFEVIKSTGFHINDT----YRARFSSVTEKDVVKALDNLVRPNRDEALAVDARQE 176

Query: 2583 IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSL 2404
            IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFWSL
Sbjct: 177  IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSL 236

Query: 2403 HPHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTV 2224
            HP++I+NGYE++LEW R KLFD +VA+MFQK+V EDG LEVT++S K+E+K RP GLNTV
Sbjct: 237  HPYIIQNGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTV 296

Query: 2223 NMLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWG 2044
            N+LKVASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP SFDF+  L A  NNPTWG
Sbjct: 297  NLLKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFRGVLSAQTNNPTWG 356

Query: 2043 DYVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDC 1864
            +YV  LL  G+ KPR GTDVGDHPPITPMRSA E+MLG+DAWKLYQ+ICQHFIGTVSPDC
Sbjct: 357  NYVQGLLTNGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDC 416

Query: 1863 KYVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYE 1684
            KY+R+KVE S GGE F+C GQHV  KGFT+IMPW+A+N+KN+PSF KG+K+++ K+ELYE
Sbjct: 417  KYIRRKVEFSIGGESFHCTGQHVVTKGFTAIMPWLAINDKNIPSFIKGQKIEVSKLELYE 476

Query: 1683 GNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLI 1504
            G+TSPPD+L+ESELISLMEKNGIGTDASIPVHINNICERN+VQVQAGR+LVPTTLGITL+
Sbjct: 477  GSTSPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLV 536

Query: 1503 RGYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDA 1324
            RGYQ IDPDLCLPDIR FIEQQITLIAKGQ DH HVV+HV++QFT+K+SYFVK+IE+MDA
Sbjct: 537  RGYQTIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDA 596

Query: 1323 LFEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELV 1144
            LFEAQFS L DSGR+LSKCGKC+RYMK+IS QP RLYCGTCEEVYYLPQ GTIKLYKEL 
Sbjct: 597  LFEAQFSTLTDSGRILSKCGKCLRYMKFISTQPSRLYCGTCEEVYYLPQKGTIKLYKELS 656

Query: 1143 CPLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCF 964
            CPLDNFELLI S+ GP+ KSFPLCPYCY NPPFEGI+TL    KTG SGK+GKGAGMPC 
Sbjct: 657  CPLDNFELLICSMPGPDGKSFPLCPYCYINPPFEGIETLINTAKTGTSGKIGKGAGMPCN 716

Query: 963  LCPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTR 784
            LCPHPTC +S+++QGVCACPEC GTLVLDPVSAP+W+L CNMCNCLVFL QGAHRISTT+
Sbjct: 717  LCPHPTCPNSLVSQGVCACPECSGTLVLDPVSAPRWKLCCNMCNCLVFLAQGAHRISTTK 776

Query: 783  DRCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSF----FKXXX 616
            DRCPECDS+IIEVDFNK TTPL DGATLH GCILCDELLHSLVE+KHG+SF     +   
Sbjct: 777  DRCPECDSSIIEVDFNKKTTPLEDGATLHHGCILCDELLHSLVEMKHGRSFRHMSSRGRG 836

Query: 615  XXXXXXXXXXXXXXGKLEDPKMSFR 541
                          GK+ DPKMSFR
Sbjct: 837  RGARKGGRGRGRGGGKMMDPKMSFR 861


>ref|XP_006492982.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Citrus
            sinensis] gi|568880120|ref|XP_006492983.1| PREDICTED: DNA
            topoisomerase 3-beta-1-like isoform X2 [Citrus sinensis]
          Length = 898

 Score = 1400 bits (3625), Expect = 0.0
 Identities = 668/894 (74%), Positives = 746/894 (83%), Gaps = 37/894 (4%)
 Frame = -3

Query: 3111 PPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFS 2932
            P KVLMVAEKP          S G++ TR+ ST+VHEFDG+FLG HA  +VTSV+GHVF 
Sbjct: 3    PLKVLMVAEKPSIALSIATVLSGGKLYTRKASTEVHEFDGMFLGSHAYIKVTSVVGHVFR 62

Query: 2931 VDFPSKYQDWGVTDPLDLFNAPIQKTESNPK----------------------------- 2839
            +DFP  YQDW  ++PLDLF AP+ K ESN K                             
Sbjct: 63   LDFPPAYQDWNASNPLDLFQAPVHKAESNRKYLGVLINNLFEILASVYILCRSLGLFCSL 122

Query: 2838 --AQIRRHLSLEARGCGHLVLWLDCDREGENICFEVIECTGFHAKEARRRVYRARFSSVT 2665
                I RHL+ EARGCGHLVLWLDCDREGENICFEVIECTGF   +ARR+V+RARFSSVT
Sbjct: 123  LVVHICRHLNQEARGCGHLVLWLDCDREGENICFEVIECTGFQVNDARRKVHRARFSSVT 182

Query: 2664 EKDILKALDNLVDPNEDEAFAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGP 2485
            EKDILKA+ NLV+PN +EA AVDARQEIDLKVGVAFTRFQT+YFQGKYGNLDSR ISYGP
Sbjct: 183  EKDILKAMGNLVEPNRNEALAVDARQEIDLKVGVAFTRFQTTYFQGKYGNLDSRFISYGP 242

Query: 2484 CQTPTLGFCVQRYLQITSFKPEKFWSLHPHLIKNGYELRLEWDRSKLFDFDVAVMFQKMV 2305
            CQTPTLGFCVQRYLQITSFKPEKFW+LHP+L++NGYEL+LEW+R KLFDFDVA MFQK+V
Sbjct: 243  CQTPTLGFCVQRYLQITSFKPEKFWTLHPYLVQNGYELKLEWERQKLFDFDVATMFQKLV 302

Query: 2304 VEDGTLEVTDVSTKEESKGRPSGLNTVNMLKVASSALGIGPQVAMQLAERLYTQGFISYP 2125
            ++D  LEV D+S K+ESK RPSGLNTVN+LKVASSALG GPQ+AMQLAERLYTQGFISYP
Sbjct: 303  MQDRILEVIDISEKQESKVRPSGLNTVNLLKVASSALGYGPQMAMQLAERLYTQGFISYP 362

Query: 2124 RTESTAYPASFDFKSTLEAHLNNPTWGDYVHDLLAVGFHKPRSGTDVGDHPPITPMRSAT 1945
            RTESTAYP+SFDF+ TL A  NNP WGDYV  LLA G+ KPRSGTD GDHPPITPMRSAT
Sbjct: 363  RTESTAYPSSFDFRGTLSALANNPVWGDYVERLLAEGYAKPRSGTDAGDHPPITPMRSAT 422

Query: 1944 EEMLGSDAWKLYQFICQHFIGTVSPDCKYVRKKVELSAGGELFNCIGQHVTAKGFTSIMP 1765
            E+MLG DAW+LY ++CQHF+GTVSPDCKY+R KV+ S G E F+C+GQHVT +GFT IMP
Sbjct: 423  EDMLGKDAWRLYSYVCQHFLGTVSPDCKYIRTKVKFSMGAEFFHCVGQHVTVQGFTYIMP 482

Query: 1764 WMAVNEKNLPSFTKGEKLQILKVELYEGNTSPPDYLSESELISLMEKNGIGTDASIPVHI 1585
            W+A+NEK +P FTK EK+++ KVEL+EGNT PP+YLSESELI+LMEKNGIGTDASIPVHI
Sbjct: 483  WLAINEKKIPQFTKEEKIEVSKVELHEGNTVPPEYLSESELITLMEKNGIGTDASIPVHI 542

Query: 1584 NNICERNFVQVQAGRRLVPTTLGITLIRGYQCIDPDLCLPDIRGFIEQQITLIAKGQADH 1405
            NNICERN+VQVQAGR+L PTTLGITLIRGYQCIDPDLCLPDIR FIEQQITL+AKGQADH
Sbjct: 543  NNICERNYVQVQAGRKLAPTTLGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADH 602

Query: 1404 FHVVEHVLRQFTRKYSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCVRYMKYISIQP 1225
              VV+HVL+QF +KYSYFVKQIENMDALFEAQFSPL++SGRVLSKCGKC+RYMKYIS+QP
Sbjct: 603  SGVVQHVLQQFRQKYSYFVKQIENMDALFEAQFSPLSNSGRVLSKCGKCLRYMKYISMQP 662

Query: 1224 QRLYCGTCEEVYYLPQNGTIKLYKELVCPLDNFELLIFSLIGPEAKSFPLCPYCYNNPPF 1045
             RLYC TCE+VY LPQ GT+KLYKEL CPLDNFELLIFS+ GPE KSFPLCP+CYNNPPF
Sbjct: 663  SRLYCSTCEDVYNLPQRGTLKLYKELTCPLDNFELLIFSMAGPEGKSFPLCPFCYNNPPF 722

Query: 1044 EGIDTLFGNLKTGASGKLGKGAGMPCFLCPHPTCRHSVIAQGVCACPECDGTLVLDPVSA 865
            EGIDTL+G   TG+ GKLGKGAGMPCFLCPHP CRHS+IAQGVCACPEC+GTLVLDPVSA
Sbjct: 723  EGIDTLYGTTTTGSFGKLGKGAGMPCFLCPHPACRHSMIAQGVCACPECNGTLVLDPVSA 782

Query: 864  PKWRLYCNMCNCLVFLPQGAHRISTTRDRCPECDSTIIEVDFNKNTTPLSDGATLHVGCI 685
            PKWRLYCNMCNCLV LPQGAHRI+TT+++CPEC S IIE+DFNK TTPL DGATLH GCI
Sbjct: 783  PKWRLYCNMCNCLVSLPQGAHRIATTQEQCPECGSKIIEIDFNKKTTPLDDGATLHTGCI 842

Query: 684  LCDELLHSLVEVKHGKSFFK------XXXXXXXXXXXXXXXXXGKLEDPKMSFR 541
            LCDELLHSL+EVKHGKSFFK                       GK  DPKMSFR
Sbjct: 843  LCDELLHSLIEVKHGKSFFKRLGGRGRGRGAGRGAFKGRGWGTGKGVDPKMSFR 896


>ref|XP_007163790.1| hypothetical protein PHAVU_001G264300g [Phaseolus vulgaris]
            gi|561037254|gb|ESW35784.1| hypothetical protein
            PHAVU_001G264300g [Phaseolus vulgaris]
          Length = 862

 Score = 1382 bits (3576), Expect = 0.0
 Identities = 658/864 (76%), Positives = 740/864 (85%), Gaps = 4/864 (0%)
 Frame = -3

Query: 3120 MAPP-PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIG 2944
            MAPP PKVLMVAEKP          S  +  TRRGST+VHEFDG FLG  A ++VTSVIG
Sbjct: 1    MAPPIPKVLMVAEKPSIALSIASVLSRNQAFTRRGSTEVHEFDGKFLGSPAYFKVTSVIG 60

Query: 2943 HVFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDR 2764
            HVFSVDFP+KYQDW  TDPLDLF + + K ESNPKA I RHLS EARGC +LVLWLDCDR
Sbjct: 61   HVFSVDFPAKYQDWAATDPLDLFQSQVLKNESNPKAHICRHLSQEARGCRYLVLWLDCDR 120

Query: 2763 EGENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQE 2584
            EGENICFEVI+CTGF   +     YRARFSSVTEKD++KALDNLV PN+DEA AVDARQE
Sbjct: 121  EGENICFEVIQCTGFKTNDT----YRARFSSVTEKDVVKALDNLVKPNKDEALAVDARQE 176

Query: 2583 IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSL 2404
            IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FK EKFWSL
Sbjct: 177  IDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKSEKFWSL 236

Query: 2403 HPHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTV 2224
            HP++I++GYE++LEW R KLFD +VA+MFQK+V EDG LEVT++S K+E+K RP GLNTV
Sbjct: 237  HPYIIQSGYEIQLEWQRGKLFDINVAMMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTV 296

Query: 2223 NMLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWG 2044
            N+LKVASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP SFDF   L A  NNPTWG
Sbjct: 297  NLLKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPPSFDFLGVLSAQKNNPTWG 356

Query: 2043 DYVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDC 1864
            +YV  LL  G+ KPR GTDVGDHPPITPMRSA E+MLG+DAWKLYQ+ICQHFIGTVSPDC
Sbjct: 357  NYVQGLLTAGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSPDC 416

Query: 1863 KYVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYE 1684
            KY+R+KVE S GGE F+C GQHV  KGFT+IMPW+A+N+KN+PSF KG+K+++ K+ELYE
Sbjct: 417  KYIRRKVEFSIGGESFHCTGQHVVTKGFTAIMPWLALNDKNIPSFVKGQKIEVSKLELYE 476

Query: 1683 GNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLI 1504
            G TSPPDYL+ESELISLMEKNGIGTDASIPVHINNICERN+VQVQAGR+LVPT LGITL+
Sbjct: 477  GITSPPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTPLGITLV 536

Query: 1503 RGYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDA 1324
            RGYQ IDPDLCLPDIR FIEQQITLIAKGQ DH HVV+HV++QFT+K+SYFVK+IE+MDA
Sbjct: 537  RGYQTIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDMDA 596

Query: 1323 LFEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELV 1144
            LFEAQFS L +SGR+LSKCGKC+RYMKYIS QP RLYCGTCEEVYYLPQ G IKLYKEL 
Sbjct: 597  LFEAQFSTLTESGRILSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGIIKLYKELS 656

Query: 1143 CPLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCF 964
            CPLDNFELLI S+ GP+ KSFPLCPYCY+NPPFEGI+ L    KTG++GK+GKG+GMPC 
Sbjct: 657  CPLDNFELLICSMPGPDGKSFPLCPYCYSNPPFEGIEALINTTKTGSAGKIGKGSGMPCS 716

Query: 963  LCPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTR 784
            LCPHP+C +S+++QGVCACPEC GTLVLDP+SAP+WRL CNMCNCLVFL QGAHRISTT+
Sbjct: 717  LCPHPSCPNSLVSQGVCACPECSGTLVLDPISAPRWRLCCNMCNCLVFLAQGAHRISTTK 776

Query: 783  DRCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSF---FKXXXX 613
            +RCPECDS+IIEVDFNK TTPL DGATLH GCILCDELLHSLVE+KHG+SF         
Sbjct: 777  ERCPECDSSIIEVDFNKKTTPLEDGATLHRGCILCDELLHSLVEMKHGRSFRHMGSRGRG 836

Query: 612  XXXXXXXXXXXXXGKLEDPKMSFR 541
                         GK+ DPKMSFR
Sbjct: 837  RGRKGGRGRGRGGGKMMDPKMSFR 860


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score = 1362 bits (3526), Expect = 0.0
 Identities = 652/862 (75%), Positives = 731/862 (84%), Gaps = 6/862 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            P VLMVAEKP          SHG+MSTR+GST+VHEFDG FLG HA Y+VTSVIGHVFS+
Sbjct: 4    PTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVFSI 63

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DF + +QDW  TDPLDLF A + KTESNPKA I +HLS EARGC  LVLWLDCDREGENI
Sbjct: 64   DFQAGFQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENI 123

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            CFEVIECTGF     R++VYRARFSSVTEKDILKALDNLV+PN +EA AVDARQEIDLKV
Sbjct: 124  CFEVIECTGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKV 183

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQT++FQGKYGNLDSR+ISYGPCQTPTLGFCVQR+LQIT+FKPEKFWS+ P+++
Sbjct: 184  GVAFTRFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYIL 243

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
            + GYEL L+W+R KLFD DV  MFQK V+EDG  EVT++S K+E+K RPSGLNTVN+LKV
Sbjct: 244  QTGYELNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNLLKV 303

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALG GPQ+AMQLAERLYTQGFISYPRTESTAYP+SFDFK TL   + NP WGDYV  
Sbjct: 304  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRM 363

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL+ G+ KPRSGTDVGDHPPITPM  ATE+MLG DAW+LYQ++CQHFIG++S DCKY+R 
Sbjct: 364  LLSDGYSKPRSGTDVGDHPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRT 423

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
            K++ S  GE+FNC G  VT KGFTSIMPW+AVNEK LP F KGEK+++ +V+LY+GNT+P
Sbjct: 424  KIQFSIAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTP 483

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PDYLSESELISLMEK+GIGTDASIPVHINNI ERN+VQVQAGRRLVPT LGITLIRGYQC
Sbjct: 484  PDYLSESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQC 543

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            IDPDLCLPDIR FIE QITL+AKGQADH  VV+ VL+QF +KYSYFVK+I++MDALFEAQ
Sbjct: 544  IDPDLCLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQ 603

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPLADSGR LSKCGKC+RYMK+IS QPQRLYCG CEEVYYLPQ GTIKLYKEL CPLDN
Sbjct: 604  FSPLADSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDN 663

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTG-ASGKLGKGAGMPCFLCPH 952
            FELLI+SL GPE KSFPLCPYCYN+PPFEGI+TL+G  K   +SG   KG GMPCF+CPH
Sbjct: 664  FELLIYSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPH 723

Query: 951  PTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCP 772
            PTCRHS+I QGVCACPEC GTLVLDPVSAP W+L CN CNCLVFLP+GAHRISTTRD+C 
Sbjct: 724  PTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCA 783

Query: 771  ECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFF-----KXXXXXX 607
            +CDSTIIEVDFNK TTPL DGATL VGCILCDE LHSL+E+KHGKSF      +      
Sbjct: 784  DCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRGRGR 843

Query: 606  XXXXXXXXXXXGKLEDPKMSFR 541
                       GK  DPKMSFR
Sbjct: 844  GRGRGGRGRSSGKPMDPKMSFR 865


>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
            tuberosum]
          Length = 860

 Score = 1360 bits (3520), Expect = 0.0
 Identities = 651/857 (75%), Positives = 724/857 (84%), Gaps = 1/857 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            PKVLMVAEKP          S   +STRRGST+VHEFD +FLG  A Y+VTSVIGHVFSV
Sbjct: 3    PKVLMVAEKPSIALSIASVLSGAHVSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVFSV 62

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP+ +QDW  T+P DLF API K E+NPKA I RHLS EARGC HLVLWLDCDREGENI
Sbjct: 63   DFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGENI 122

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
             FEVIECTGFH  + RR +YRARFSSVTEKDILKA++NLV+PN DEA +VDARQEIDLKV
Sbjct: 123  SFEVIECTGFHTSDGRR-IYRARFSSVTEKDILKAMNNLVEPNRDEALSVDARQEIDLKV 181

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GV+FTRFQTSYF GKYGNLD+RVISYGPCQTPTLGFCV RYLQIT FKPEKFW LHP+++
Sbjct: 182  GVSFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRYLQITMFKPEKFWMLHPYIM 241

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
              GYEL+LEW+RS+LFD DV+ MF+  ++EDG ++V  VS K ESK RPSGLNTVN+LKV
Sbjct: 242  YKGYELKLEWERSRLFDADVSAMFRNRIIEDGIMKVVRVSEKLESKARPSGLNTVNLLKV 301

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALG GPQ+ MQLAERLYTQGFISYPRTESTAYP+SFDFK TL A ++NP +G Y   
Sbjct: 302  ASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQK 361

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL   ++KPR+GTD GDHPPITPMRSA+E+ LG+DAWKLYQ+ICQHF+GT+SPDCKY R 
Sbjct: 362  LLTESYNKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRI 421

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
            KVE  +GGE F C+GQ  T KGFTSIMPW+A++EKNLP F  GEK++I K EL EGNTSP
Sbjct: 422  KVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVGEKIEISKAELDEGNTSP 481

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PDYL+ESELISLMEK+GIGTDASI VHINNICERN+VQVQAGRRL PT LGI+LIRGYQC
Sbjct: 482  PDYLTESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQC 541

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            ID DLCLPDIR FIE QITL+AKGQADH  VV+HVL QF RK+SYFVKQI+NMDALFEAQ
Sbjct: 542  IDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQ 601

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPL+DSGR+LSKCGKC+RYMKYIS QP RLYCGTCEEVYY+PQ GT+KLYKEL CPLDN
Sbjct: 602  FSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDN 661

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELL+ S+ GPE KSFPLCPYC+N PPFEGIDT FG  KTG S KLGKG GMPCFLCPH 
Sbjct: 662  FELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHT 721

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC HSVIAQGVCACPEC GTLVLDPVSAPKWRLYCNMCNCLV LP+GAHRISTT+D+CPE
Sbjct: 722  TCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVSLPEGAHRISTTQDKCPE 781

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK-XXXXXXXXXXX 592
            CDSTIIEVDFNK TTPL DGATLH GCILCDELLHSLVE+KHG+SF +            
Sbjct: 782  CDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGRGRGR 841

Query: 591  XXXXXXGKLEDPKMSFR 541
                   K +DPKMSFR
Sbjct: 842  GRGRGSTKQQDPKMSFR 858


>ref|XP_002881210.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297327049|gb|EFH57469.1| DNA topoisomerase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 865

 Score = 1358 bits (3515), Expect = 0.0
 Identities = 646/863 (74%), Positives = 734/863 (85%), Gaps = 3/863 (0%)
 Frame = -3

Query: 3120 MAPPPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGH 2941
            MA  P+VLMVAEKP          SHG+MSTRRGST+VHEFDG+F G  A YRVTSVIGH
Sbjct: 1    MANLPRVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGH 60

Query: 2940 VFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDRE 2761
            VFSVDFP KYQ+W   DP DLF+API K ESNPKA I RHLS EARGC ++VLWLDCDRE
Sbjct: 61   VFSVDFPEKYQNWATIDPQDLFDAPILKKESNPKAHICRHLSNEARGCSYMVLWLDCDRE 120

Query: 2760 GENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEI 2581
            GENICFEVIE TGF  K+++R+VYRARFSSVTEKDI KA+DNLV+PN DEA AVDARQEI
Sbjct: 121  GENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEI 180

Query: 2580 DLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLH 2401
            DLKVGVAF+RFQTSYFQGKY NLD RVISYGPCQTPTLGFCVQRY+ I +FKPEKFW+L 
Sbjct: 181  DLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALR 240

Query: 2400 PHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVN 2221
            P++IK+GYEL+LEW+R +LFD + A +FQK+VVE  T +V DVS K+E KGRP+GLNTV+
Sbjct: 241  PYIIKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVS 300

Query: 2220 MLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGD 2041
            +LKVASSALG GPQ AM LAERLYTQGFISYPRTESTAYP+SFDF  TL A ++NP WG 
Sbjct: 301  LLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGG 360

Query: 2040 YVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCK 1861
            YV  LL+ GFHKP+SGTD GDHPPITPMR+ATE M+G DAW+LYQ++CQHFIGTVSP+CK
Sbjct: 361  YVQRLLSDGFHKPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFIGTVSPNCK 420

Query: 1860 YVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEG 1681
            Y+R KVELS GGE F+C GQ VT KGFT+IMPW AV+EK LPSF KGE++++++VELYEG
Sbjct: 421  YIRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVIRVELYEG 480

Query: 1680 NTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIR 1501
            NT+PPDYL+ESELISLMEK+GIGTDASIPVHINNI ERN+VQVQAGR+LVPT LGITLIR
Sbjct: 481  NTAPPDYLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRKLVPTALGITLIR 540

Query: 1500 GYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDAL 1321
            GYQCIDPDLCLPDIR FIEQQITL+AKGQADH HVV+HV++QF RK+SYFV+QIE+MDAL
Sbjct: 541  GYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDAL 600

Query: 1320 FEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVC 1141
            FEAQFSPLADSGR LSKCGKC+RYMK+I+  P RL+CGTCEEVYYLPQ GTIKLYKEL C
Sbjct: 601  FEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTIKLYKELTC 660

Query: 1140 PLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKT-GASGKLGKGAGMPCF 964
            PLDNFEL+I+S+ GPE KSFPLCPYCYN+PPFEGIDTLFG  KT  A  K   G+GMPC 
Sbjct: 661  PLDNFELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGSGMPCS 720

Query: 963  LCPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTR 784
            LCPHPTC+HSV  QGVCACPEC+GTLVLDPVS PKW+L CN+C+C+V LP+GAHRI+TT 
Sbjct: 721  LCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRIATTS 780

Query: 783  DRCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK--XXXXX 610
            +RCPECDS IIE+DFNK TTPL +GATLH GC+LCDELL SLVEVKHG+SF +       
Sbjct: 781  NRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGRG 840

Query: 609  XXXXXXXXXXXXGKLEDPKMSFR 541
                         K  DPKMSFR
Sbjct: 841  RGRGRGRGGRRGSKAVDPKMSFR 863


>ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Cicer
            arietinum]
          Length = 859

 Score = 1358 bits (3514), Expect = 0.0
 Identities = 645/858 (75%), Positives = 732/858 (85%), Gaps = 2/858 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            PKVLMVAEKP          SHG+M TR+GST+VHEF+G FLG  A+++VTSVIGHVFSV
Sbjct: 4    PKVLMVAEKPSIALSIASVLSHGQMFTRKGSTEVHEFEGRFLGSPARFKVTSVIGHVFSV 63

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP KYQDW  TDPLDLF A + KTESNPKA I +HL+ EARGC +LVLWLDCDREGENI
Sbjct: 64   DFPGKYQDWAATDPLDLFQAQVLKTESNPKAHICKHLNQEARGCRYLVLWLDCDREGENI 123

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            CFEVIE TGF+ K+    VYRARFS+VTEKD+LKALDNLV PN DEA AVDARQEIDLKV
Sbjct: 124  CFEVIESTGFNIKD----VYRARFSAVTEKDVLKALDNLVRPNRDEAMAVDARQEIDLKV 179

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQTS+FQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQI +FKPEKFWSLHP++I
Sbjct: 180  GVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYII 239

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
            ++GYE++LEW RSKLFD +VA+MFQK+V EDG  EV ++S K+E+K RP GLNTVN+LKV
Sbjct: 240  QSGYEIQLEWQRSKLFDINVAMMFQKLVAEDGIFEVAEISEKQETKCRPVGLNTVNLLKV 299

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALG GPQ+AMQLAERLYTQGFISYPRTEST+YP SFDF   L A  NNPTWG YV  
Sbjct: 300  ASSALGFGPQMAMQLAERLYTQGFISYPRTESTSYPPSFDFHGALSAQTNNPTWGSYVKG 359

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL  G+ KPR GTD GDHPPITPM+SA+E+MLG+DAWKLYQ+ICQ+FIGTVSPDCKYVRK
Sbjct: 360  LLTSGYQKPRLGTDAGDHPPITPMKSASEDMLGNDAWKLYQYICQYFIGTVSPDCKYVRK 419

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
            KVE S GGE F+C GQHV  KGFT+IMPW+++N+K++PSFTKG+K+++ KVELYEG+T+P
Sbjct: 420  KVEFSVGGEFFHCTGQHVITKGFTAIMPWLSINDKSIPSFTKGQKIKVTKVELYEGSTTP 479

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PD+L+ESELISLMEKNGIGTDASIPVHINNICERN+VQVQAGR+LVPTTLGITLIRGYQ 
Sbjct: 480  PDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGITLIRGYQS 539

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            IDPDLCLPDIR FIEQQITLIAKGQ DH  VV+HV+ QF +K+ YFVK+IE MDALFEAQ
Sbjct: 540  IDPDLCLPDIRSFIEQQITLIAKGQVDHHRVVQHVIEQFKQKFCYFVKKIEAMDALFEAQ 599

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FS L DSGR+LSKCGKC+RYMKYIS QP RLYC TCEEVY LPQ GTIKLYKEL CPLDN
Sbjct: 600  FSALVDSGRILSKCGKCLRYMKYISSQPPRLYCMTCEEVYPLPQKGTIKLYKELSCPLDN 659

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELLI S+ GPE KSFPLCPYCY+NPPFEG++ L  + KT  +GK GKGAGM C LCPHP
Sbjct: 660  FELLICSIPGPEGKSFPLCPYCYSNPPFEGVEELINSAKTSTAGKNGKGAGMACNLCPHP 719

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC +S+++QGVCACPEC GTLVLDP+SAP WRL CNMCNCLVFL QGAHRISTT++RCPE
Sbjct: 720  TCPNSLVSQGVCACPECSGTLVLDPISAPNWRLCCNMCNCLVFLAQGAHRISTTKERCPE 779

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSF--FKXXXXXXXXXX 595
            CDS+I+EVDFNK TTPL DG+TLH GCILCD LLHS+VE+K+G+SF   +          
Sbjct: 780  CDSSILEVDFNKKTTPLEDGSTLHRGCILCDPLLHSIVEMKYGRSFKRGRGRGRGRRGAI 839

Query: 594  XXXXXXXGKLEDPKMSFR 541
                    K+ DPKMSFR
Sbjct: 840  RGRGRGGVKMMDPKMSFR 857


>ref|XP_004160658.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 864

 Score = 1353 bits (3503), Expect = 0.0
 Identities = 647/857 (75%), Positives = 727/857 (84%), Gaps = 6/857 (0%)
 Frame = -3

Query: 3093 VAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSVDFPSK 2914
            VAEKP          SHG+MSTR+GST+VHEFDG FLG HA Y+VTSVIGHVFS+DF + 
Sbjct: 6    VAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVFSIDFQAG 65

Query: 2913 YQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENICFEVI 2734
            +QDW  TDPLDLF A + KTESNPKA I +HLS EARGC  LVLWLDCDREGENICFEVI
Sbjct: 66   FQDWKSTDPLDLFQASVIKTESNPKAHICQHLSREARGCDCLVLWLDCDREGENICFEVI 125

Query: 2733 ECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKVGVAFT 2554
            EC+GF     R++VYRARFSSVTEKDILKALDNLV+PN +EA AVDARQEIDLKVGVAFT
Sbjct: 126  ECSGFGGNGTRKKVYRARFSSVTEKDILKALDNLVEPNRNEALAVDARQEIDLKVGVAFT 185

Query: 2553 RFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLIKNGYE 2374
            RFQT++FQGKYGNLDSR+ISYGPCQTPTLGFCVQR+LQIT+FKPEKFWS+ P++++ GYE
Sbjct: 186  RFQTTFFQGKYGNLDSRLISYGPCQTPTLGFCVQRHLQITTFKPEKFWSVCPYILQTGYE 245

Query: 2373 LRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKVASSAL 2194
            L L+W+R KLFD DV  MFQK V+EDG  EVT++S K+E+K RPSGLNTVN+LKVASSAL
Sbjct: 246  LNLDWERGKLFDCDVTAMFQKRVIEDGIAEVTEISEKQENKVRPSGLNTVNLLKVASSAL 305

Query: 2193 GIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHDLLAVG 2014
            G GPQ+AMQLAERLYTQGFISYPRTESTAYP+SFDFK TL   + NP WGDYV  LL+ G
Sbjct: 306  GFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLHTLVKNPEWGDYVRMLLSDG 365

Query: 2013 FHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRKKVELS 1834
            + KPRSGTDVGDHPPITPM  ATE+MLG DAW+LYQ++CQHFIG++S DCKY+R K++ S
Sbjct: 366  YSKPRSGTDVGDHPPITPMCLATEDMLGRDAWRLYQYVCQHFIGSLSSDCKYIRTKIQFS 425

Query: 1833 AGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSPPDYLS 1654
              GE+FNC G  VT KGFTSIMPW+AVNEK LP F KGEK+++ +V+LY+GNT+PPDYLS
Sbjct: 426  IAGEIFNCTGSRVTVKGFTSIMPWLAVNEKKLPQFLKGEKIEVARVDLYQGNTTPPDYLS 485

Query: 1653 ESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQCIDPDL 1474
            ESELISLMEK+GIGTDASIPVHINNI ERN+VQVQAGRRLVPT LGITLIRGYQCIDPDL
Sbjct: 486  ESELISLMEKHGIGTDASIPVHINNIGERNYVQVQAGRRLVPTNLGITLIRGYQCIDPDL 545

Query: 1473 CLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQFSPLA 1294
            CLPDIR FIE QITL+AKGQADH  VV+ VL+QF +KYSYFVK+I++MDALFEAQFSPLA
Sbjct: 546  CLPDIRSFIEHQITLVAKGQADHSSVVQSVLQQFRQKYSYFVKKIDHMDALFEAQFSPLA 605

Query: 1293 DSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDNFELLI 1114
            DSGR LSKCGKC+RYMK+IS QPQRLYCG CEEVYYLPQ GTIKLYKEL CPLDNFELLI
Sbjct: 606  DSGRALSKCGKCLRYMKFISSQPQRLYCGICEEVYYLPQKGTIKLYKELTCPLDNFELLI 665

Query: 1113 FSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTG-ASGKLGKGAGMPCFLCPHPTCRH 937
            +SL GPE KSFPLCPYCYN+PPFEGI+TL+G  K   +SG   KG GMPCF+CPHPTCRH
Sbjct: 666  YSLPGPEGKSFPLCPYCYNSPPFEGINTLYGASKANPSSGTSSKGMGMPCFMCPHPTCRH 725

Query: 936  SVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPECDST 757
            S+I QGVCACPEC GTLVLDPVSAP W+L CN CNCLVFLP+GAHRISTTRD+C +CDST
Sbjct: 726  SLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCADCDST 785

Query: 756  IIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFF-----KXXXXXXXXXXX 592
            IIEVDFNK TTPL DGATL VGCILCDE LHSL+E+KHGKSF      +           
Sbjct: 786  IIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRGRGRGRGRG 845

Query: 591  XXXXXXGKLEDPKMSFR 541
                  GK  DPKMSFR
Sbjct: 846  GRGRGSGKPMDPKMSFR 862


>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
          Length = 864

 Score = 1348 bits (3488), Expect = 0.0
 Identities = 646/861 (75%), Positives = 721/861 (83%), Gaps = 5/861 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            PKV MVAEKP          S  +MSTRRGST+VHEFD +FLG  A Y+VTSVIGHVFSV
Sbjct: 3    PKVFMVAEKPSIALSIASVLSGAQMSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVFSV 62

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP+ +QDW  T+P DLF API K E+NPKA I RHLS EARGC HLVLWLDCDREGENI
Sbjct: 63   DFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGENI 122

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            CFEVIECTGFH  + RR +YRARFSSVTEKDILKA+++L +PN DEA +VDARQEIDLKV
Sbjct: 123  CFEVIECTGFHTSDGRR-IYRARFSSVTEKDILKAMNSLAEPNRDEALSVDARQEIDLKV 181

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQTSYF GKYGNLD+RVISYGPCQTPTLGFCV R+LQIT FKPEKFW LHP+++
Sbjct: 182  GVAFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRFLQITMFKPEKFWMLHPYIM 241

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
              GYEL+LEW+RS+LFD DV+ MF+  ++ED  ++V  VS K ESK RPSGLNTVN+LKV
Sbjct: 242  YKGYELKLEWERSRLFDADVSAMFRNRIIEDRIMKVVRVSEKLESKARPSGLNTVNLLKV 301

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALG GPQ+ MQLAERLYTQGFISYPRTESTAYP+SFDFK TL A ++NP +G Y   
Sbjct: 302  ASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQK 361

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL   + KPR+GTD GDHPPITPMRSA+E+ LG+DAWKLYQ+ICQHF+GT+SPDCKY R 
Sbjct: 362  LLTDNYIKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRRI 421

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
            KVE  +GGE F C+GQ  T KGFTSIMPW+A++EKNLP F  GEK+++ KVEL EG+TSP
Sbjct: 422  KVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVGEKIEVSKVELDEGDTSP 481

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            P YLSESELISLMEK+GIGTDASI VHINNICERN+VQVQAGRRL PT LGI+LIRGYQC
Sbjct: 482  PGYLSESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQC 541

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            ID DLCLPDIR FIE QITL+AKGQADH  VV+HVL QF RK+SYFVKQI+NMDALFEAQ
Sbjct: 542  IDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEAQ 601

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPL+DSGR+LSKCGKC+RYMKYIS QP RLYCGTCEEVYY+PQ GT+KLYKEL CPLDN
Sbjct: 602  FSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLDN 661

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELL+ S+ GPE KSFPLCPYC+N PPFEGIDT FG  KTG S KLGKG GMPCFLCPH 
Sbjct: 662  FELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPHT 721

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC HSVIAQGVCACPEC GTLVLDPVSAPKWRLYCN CNCLV LP+GAHRISTT+++CPE
Sbjct: 722  TCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNTCNCLVSLPEGAHRISTTQEKCPE 781

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK-----XXXXXXX 604
            CDSTIIEVDFNK TTPL DGATLH GCILCDELLHSLVE+KHG+SF +            
Sbjct: 782  CDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGRGRGR 841

Query: 603  XXXXXXXXXXGKLEDPKMSFR 541
                       K +DPKMSFR
Sbjct: 842  GGYRGRGRGSNKQQDPKMSFR 862


>ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
            gi|241923856|gb|EER97000.1| hypothetical protein
            SORBIDRAFT_02g029000 [Sorghum bicolor]
          Length = 866

 Score = 1348 bits (3488), Expect = 0.0
 Identities = 640/864 (74%), Positives = 726/864 (84%), Gaps = 8/864 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            PKVLMVAEKP          S GRMSTR+GSTDVHEFDG F G +A ++VTSVIGHV SV
Sbjct: 3    PKVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGTFQGSYANFKVTSVIGHVLSV 62

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP  YQ+W  TDPLDLF AP+ ++E NPKA IRRHL+ EARGC +L+LWLDCDREGENI
Sbjct: 63   DFPPAYQNWEATDPLDLFEAPVLRSECNPKAHIRRHLAQEARGCTYLILWLDCDREGENI 122

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            C+EVIECTG    +  RR++RARFSSVTEKDIL A+DNLV PN+DEA +VDARQEIDLKV
Sbjct: 123  CYEVIECTGI--PDNGRRIFRARFSSVTEKDILTAMDNLVLPNKDEALSVDARQEIDLKV 180

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQT YFQGKYGNLDSRVISYGPCQTPTLGFCVQRY QIT+FKPEKFWSL  ++I
Sbjct: 181  GVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYII 240

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
            K+  E++LEWDR KLFDFDV VMFQKMV+ DG+L+V DVS KEE K RPSGLNTVNMLKV
Sbjct: 241  KDSDEIQLEWDRKKLFDFDVTVMFQKMVISDGSLKVADVSVKEECKTRPSGLNTVNMLKV 300

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALGIGPQ AM LAERLYTQGFISYPRTESTAYP+SFDF+  L A LNNP W + V  
Sbjct: 301  ASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRGALAALLNNPLWSNDVRT 360

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL  GF KPR G D GDHPPITPMRSATE  LG+DAW+LYQ+ICQHFIGTVSPDC+Y R 
Sbjct: 361  LLDAGFVKPRQGHDAGDHPPITPMRSATEAALGTDAWRLYQYICQHFIGTVSPDCRYTRT 420

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
             +E ++GGE F+C+G  VT+KGFTSIMPW+A++E +LP+F KG+ + I KV++YEG+T+P
Sbjct: 421  AIEFTSGGETFHCVGYRVTSKGFTSIMPWLAISENSLPAFKKGDSVSIHKVDIYEGSTTP 480

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PDYL+ESELISLMEKNGIGTDASIPVHINNICERN+VQV +GRRLVPT LG TLIRGYQC
Sbjct: 481  PDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVNSGRRLVPTPLGTTLIRGYQC 540

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            ID DLCLPDIR FIEQQITLIAKG+ADH  V++HV++QF +KYSYFVK+IENMDALFEAQ
Sbjct: 541  IDADLCLPDIRSFIEQQITLIAKGKADHLRVIQHVIQQFMKKYSYFVKKIENMDALFEAQ 600

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPLADSGR+LSKCGKC RYMKYIS QP RLYC TCE+VYYLPQNG+IKLYKE++CPLD 
Sbjct: 601  FSPLADSGRLLSKCGKCGRYMKYISTQPMRLYCITCEDVYYLPQNGSIKLYKEIICPLDG 660

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELL+FS++GP+AKSFPLCP+CYN PPFEGID LFG LK   +GK+GKGAGMPCFLCPHP
Sbjct: 661  FELLLFSMVGPDAKSFPLCPFCYNCPPFEGIDKLFGALKLDDTGKVGKGAGMPCFLCPHP 720

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC+ S+I QGVCACPEC GTL+LDPVSAPKWRLYCNMCNC+V LP  AHRI+TT  +C  
Sbjct: 721  TCKQSMITQGVCACPECSGTLILDPVSAPKWRLYCNMCNCIVLLPHAAHRITTTDKKCLT 780

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFF--------KXXXX 613
            C+STIIEVDFNK TTPL DGATLH GCILCD+LLHSL+E+KHGKSFF        +    
Sbjct: 781  CESTIIEVDFNKKTTPLQDGATLHEGCILCDDLLHSLIEMKHGKSFFMRRGRGRGRGRGR 840

Query: 612  XXXXXXXXXXXXXGKLEDPKMSFR 541
                          + +DPKMSFR
Sbjct: 841  GRGSSRGRGRLGNSRYDDPKMSFR 864


>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
            gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
            Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 866

 Score = 1347 bits (3485), Expect = 0.0
 Identities = 637/862 (73%), Positives = 725/862 (84%), Gaps = 6/862 (0%)
 Frame = -3

Query: 3108 PKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGHVFSV 2929
            P VLMVAEKP          S GRMSTR+GSTDVHEFDG+F G HA ++VTSVIGHV SV
Sbjct: 3    PTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVLSV 62

Query: 2928 DFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDREGENI 2749
            DFP  YQ+W  TDP+DLF AP+ ++E NPKA IRRHL+ EARGC +LVLWLDCDREGENI
Sbjct: 63   DFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQEARGCTYLVLWLDCDREGENI 122

Query: 2748 CFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEIDLKV 2569
            C+EVI+CTG    E  RR++RA+FSSVTEKDI+ A++NLV P++DEA AVDARQEIDLKV
Sbjct: 123  CYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNNLVLPSKDEALAVDARQEIDLKV 182

Query: 2568 GVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLHPHLI 2389
            GVAFTRFQT YFQGKYGNLDSRVISYGPCQTPTLGFCVQRY QIT+FKPEKFWSL  ++I
Sbjct: 183  GVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYVI 242

Query: 2388 KNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVNMLKV 2209
            K+G E++LEWDR KLFDFDV VMFQKMV  DG L+VTD+S KEE K RP GLNTVN+LKV
Sbjct: 243  KDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGILKVTDISVKEECKARPPGLNTVNLLKV 302

Query: 2208 ASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGDYVHD 2029
            ASSALGIGPQ AM LAERLYTQGFISYPRTESTAYP+SFDF+S L A  +NP W + V  
Sbjct: 303  ASSALGIGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFRSALAALAHNPLWSNDVRT 362

Query: 2028 LLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCKYVRK 1849
            LL  GF KP+ G D GDHPPITPMR ATEE LG+DAW+LYQ+ICQHFIGTVSPDC+Y R 
Sbjct: 363  LLDTGFVKPKQGHDAGDHPPITPMRLATEEALGTDAWRLYQYICQHFIGTVSPDCRYTRT 422

Query: 1848 KVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEGNTSP 1669
             +E ++GGE F+C+G  VT+KGFTSIMPW+AV+E N+P++ KG+ + I KV++YEG+T+P
Sbjct: 423  SIEFTSGGETFHCVGNRVTSKGFTSIMPWLAVSENNIPAYKKGDAVSIHKVDIYEGSTTP 482

Query: 1668 PDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIRGYQC 1489
            PDYLSESELISLMEKNGIGTDASIPVH+NNICERN+VQV +GRRLVPT LG TLIRGYQC
Sbjct: 483  PDYLSESELISLMEKNGIGTDASIPVHVNNICERNYVQVNSGRRLVPTPLGTTLIRGYQC 542

Query: 1488 IDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDALFEAQ 1309
            ID DLCLPDIR FIEQQITLIAKG+ADH  VV+HVL+QF +KYSYFVK+IENMDALFEAQ
Sbjct: 543  IDADLCLPDIRRFIEQQITLIAKGEADHLQVVQHVLQQFMKKYSYFVKKIENMDALFEAQ 602

Query: 1308 FSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVCPLDN 1129
            FSPLADSGR+LSKCGKC RYMKYIS QP RLYC TCEEVYYLPQNG+IKLYKE++CPLD 
Sbjct: 603  FSPLADSGRLLSKCGKCARYMKYISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPLDG 662

Query: 1128 FELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKTGASGKLGKGAGMPCFLCPHP 949
            FELL+FS++GP+AKSFPLCP+CYN+PPFEGID LFG LK   +GK+GKGAGMPCFLC HP
Sbjct: 663  FELLLFSMVGPDAKSFPLCPFCYNSPPFEGIDKLFGALKLDDTGKVGKGAGMPCFLCLHP 722

Query: 948  TCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTRDRCPE 769
            TC+ S+I QGVCACPEC GTL+LDPVSAPKWRLYCN CNC+V LP  AH+ISTT  +CP 
Sbjct: 723  TCKQSMITQGVCACPECTGTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTTDKKCPT 782

Query: 768  CDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFF------KXXXXXX 607
            C+STIIEVDFNK TTPL DGATLH GCILCDELLHSL+E+KHGKSFF      +      
Sbjct: 783  CESTIIEVDFNKKTTPLKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGRGRGRGR 842

Query: 606  XXXXXXXXXXXGKLEDPKMSFR 541
                        + +DPKMSFR
Sbjct: 843  GRGSSRGRRGSSRHDDPKMSFR 864


>ref|NP_180760.2| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|330253525|gb|AEC08619.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 865

 Score = 1346 bits (3484), Expect = 0.0
 Identities = 641/863 (74%), Positives = 730/863 (84%), Gaps = 3/863 (0%)
 Frame = -3

Query: 3120 MAPPPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGH 2941
            MA   +VLMVAEKP          SHG+MSTRRGST+VHEFDG+F G  A YRVTSVIGH
Sbjct: 1    MANLLRVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGH 60

Query: 2940 VFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPKAQIRRHLSLEARGCGHLVLWLDCDRE 2761
            VFSVDFP KYQ+W   DP DLF+API K ESNPKA I RHLS EARGC ++VLWLDCDRE
Sbjct: 61   VFSVDFPEKYQNWATIDPQDLFDAPIIKKESNPKAHICRHLSNEARGCSYMVLWLDCDRE 120

Query: 2760 GENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDPNEDEAFAVDARQEI 2581
            GENICFEVIE TGF  K+++R+VYRARFSSVTEKDI KA+DNLV+PN DEA AVDARQEI
Sbjct: 121  GENICFEVIESTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEPNRDEALAVDARQEI 180

Query: 2580 DLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLQITSFKPEKFWSLH 2401
            DLKVGVAF+RFQTSYFQGKY NLD RVISYGPCQTPTLGFCVQRY+ I +FKPEKFW+L 
Sbjct: 181  DLKVGVAFSRFQTSYFQGKYQNLDCRVISYGPCQTPTLGFCVQRYMHINTFKPEKFWALR 240

Query: 2400 PHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTKEESKGRPSGLNTVN 2221
            P++ K+GYEL+LEW+R +LFD + A +FQK+VVE  T +V DVS K+E KGRP+GLNTVN
Sbjct: 241  PYIRKDGYELQLEWERRRLFDLEAATVFQKLVVEGRTAKVMDVSEKQEVKGRPAGLNTVN 300

Query: 2220 MLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFKSTLEAHLNNPTWGD 2041
            +LKVASSALG GPQ AM LAERLYTQGFISYPRTESTAYP+SFDF  TL A ++NP WG 
Sbjct: 301  LLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFTDTLRAQVSNPVWGG 360

Query: 2040 YVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQFICQHFIGTVSPDCK 1861
            YV  LL+ GFH P+SGTD GDHPPITPMR+ATE M+G DAW+LYQ++CQHF+GTVSP+CK
Sbjct: 361  YVQRLLSDGFHMPKSGTDAGDHPPITPMRAATEVMVGGDAWRLYQYVCQHFLGTVSPNCK 420

Query: 1860 YVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTKGEKLQILKVELYEG 1681
            Y+R KVELS GGE F+C GQ VT KGFT+IMPW AV+EK LPSF KGE++++L+VELYEG
Sbjct: 421  YIRTKVELSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFLKGERIEVLRVELYEG 480

Query: 1680 NTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRRLVPTTLGITLIR 1501
            NT+PPDYL+ESELISLMEK+GIGTDASI VHINNI ERN+VQVQ+GR++VPT LGITLIR
Sbjct: 481  NTAPPDYLTESELISLMEKHGIGTDASIAVHINNIGERNYVQVQSGRKMVPTALGITLIR 540

Query: 1500 GYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRKYSYFVKQIENMDAL 1321
            GYQCIDPDLCLPDIR FIEQQITL+AKGQADH HVV+HV++QF RK+SYFV+QIE+MDAL
Sbjct: 541  GYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRKFSYFVQQIEHMDAL 600

Query: 1320 FEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYLPQNGTIKLYKELVC 1141
            FEAQFSPLADSGR LSKCGKC+RYMK+I+  P RL+CGTCEEVYYLPQ GT+KLYKEL C
Sbjct: 601  FEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYLPQKGTVKLYKELTC 660

Query: 1140 PLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKT-GASGKLGKGAGMPCF 964
            PLDNFEL+I+S+ GPE KSFPLCPYCYN+PPFEGIDTLFG  KT  A  K   GAGMPC 
Sbjct: 661  PLDNFELVIYSVPGPEGKSFPLCPYCYNSPPFEGIDTLFGASKTPNAPAKTKTGAGMPCS 720

Query: 963  LCPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLVFLPQGAHRISTTR 784
            LCPHPTC+HSV  QGVCACPEC+GTLVLDPVS PKW+L CN+C+C+V LP+GAHRI+TT 
Sbjct: 721  LCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCIVLLPEGAHRITTTS 780

Query: 783  DRCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVKHGKSFFK--XXXXX 610
            +RCPECDS IIE+DFNK TTPL +GATLH GC+LCDELL SLVEVKHG+SF +       
Sbjct: 781  NRCPECDSAIIEIDFNKKTTPLENGATLHQGCVLCDELLLSLVEVKHGRSFVRRGGRGRG 840

Query: 609  XXXXXXXXXXXXGKLEDPKMSFR 541
                         K  DPKMSFR
Sbjct: 841  RGRGRGRGGRRGSKSVDPKMSFR 863


>ref|XP_006410336.1| hypothetical protein EUTSA_v10016222mg [Eutrema salsugineum]
            gi|557111505|gb|ESQ51789.1| hypothetical protein
            EUTSA_v10016222mg [Eutrema salsugineum]
          Length = 879

 Score = 1346 bits (3483), Expect = 0.0
 Identities = 643/877 (73%), Positives = 734/877 (83%), Gaps = 17/877 (1%)
 Frame = -3

Query: 3120 MAPPPKVLMVAEKPXXXXXXXXXXSHGRMSTRRGSTDVHEFDGLFLGMHAQYRVTSVIGH 2941
            MA  P+VLMVAEKP          SHG+MSTRRGST+VHEFDG+F G  A YRVTSVIGH
Sbjct: 1    MAHLPRVLMVAEKPSIALSIASVLSHGQMSTRRGSTEVHEFDGMFRGFKAHYRVTSVIGH 60

Query: 2940 VFSVDFPSKYQDWGVTDPLDLFNAPIQKTESNPK--------------AQIRRHLSLEAR 2803
            VFSVDFP KYQ+W   DP DLF+API K ESNPK              A I RHLS EAR
Sbjct: 61   VFSVDFPEKYQNWATIDPQDLFDAPILKKESNPKLVVDMHLYSVFKCQAHICRHLSNEAR 120

Query: 2802 GCGHLVLWLDCDREGENICFEVIECTGFHAKEARRRVYRARFSSVTEKDILKALDNLVDP 2623
            GC ++VLWLDCDREGENICFEV+ECTGF  K+++R+VYRARFSSVTEKDI KA+DNLV+P
Sbjct: 121  GCSYMVLWLDCDREGENICFEVMECTGFDMKDSKRKVYRARFSSVTEKDISKAMDNLVEP 180

Query: 2622 NEDEAFAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDSRVISYGPCQTPTLGFCVQRYL 2443
            N DEA AVDARQEIDLKVGV F+RFQTSYFQGKY +LD RVISYGPCQTPTLGFCVQRY+
Sbjct: 181  NRDEALAVDARQEIDLKVGVTFSRFQTSYFQGKYQSLDCRVISYGPCQTPTLGFCVQRYM 240

Query: 2442 QITSFKPEKFWSLHPHLIKNGYELRLEWDRSKLFDFDVAVMFQKMVVEDGTLEVTDVSTK 2263
            QI +FKPEKFWSL PHLIK+GYEL+LEWDR +LFD + A++FQK+VVE  T +V DVS K
Sbjct: 241  QINTFKPEKFWSLRPHLIKDGYELQLEWDRRRLFDLEAAIVFQKLVVEGRTAKVIDVSEK 300

Query: 2262 EESKGRPSGLNTVNMLKVASSALGIGPQVAMQLAERLYTQGFISYPRTESTAYPASFDFK 2083
            +E KGRP+GLNTVN+LKVASSALG GPQ AM LAERLYTQGFISYPRTESTAYP+SFDF 
Sbjct: 301  QEVKGRPAGLNTVNLLKVASSALGFGPQTAMHLAERLYTQGFISYPRTESTAYPSSFDFT 360

Query: 2082 STLEAHLNNPTWGDYVHDLLAVGFHKPRSGTDVGDHPPITPMRSATEEMLGSDAWKLYQF 1903
             TL A ++NP WG +V  LL+ GFHKP+SGTD GDHPPITPMR+ATE M+G DAW+LYQ+
Sbjct: 361  DTLRAQVSNPVWGGFVQRLLSDGFHKPKSGTDAGDHPPITPMRAATEAMVGGDAWRLYQY 420

Query: 1902 ICQHFIGTVSPDCKYVRKKVELSAGGELFNCIGQHVTAKGFTSIMPWMAVNEKNLPSFTK 1723
            +CQHFIGTVSP+CKY+R KVE+S GGE F+C GQ VT KGFT+IMPW AV+EK LPSF +
Sbjct: 421  VCQHFIGTVSPNCKYMRTKVEMSIGGETFHCTGQRVTEKGFTAIMPWSAVDEKKLPSFIR 480

Query: 1722 GEKLQILKVELYEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAG 1543
            GEK+++L+VELYEGNT+PPD+L+ESELISLMEK+GIGTDASIPVHINNI ERN+VQVQ+G
Sbjct: 481  GEKIEVLRVELYEGNTAPPDFLTESELISLMEKHGIGTDASIPVHINNIGERNYVQVQSG 540

Query: 1542 RRLVPTTLGITLIRGYQCIDPDLCLPDIRGFIEQQITLIAKGQADHFHVVEHVLRQFTRK 1363
            R+LVPT LGITLIRGYQCIDPDLCLPDIR FIEQQITL+AKGQADH HVV+HV++QF RK
Sbjct: 541  RKLVPTALGITLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSHVVQHVIQQFRRK 600

Query: 1362 YSYFVKQIENMDALFEAQFSPLADSGRVLSKCGKCVRYMKYISIQPQRLYCGTCEEVYYL 1183
            +SYFV+QIE+MDALFEAQFSPLADSGR LSKCGKC+RYMK+I+  P RL+CGTCEEVYYL
Sbjct: 601  FSYFVQQIEHMDALFEAQFSPLADSGRALSKCGKCLRYMKHITAVPPRLFCGTCEEVYYL 660

Query: 1182 PQNGTIKLYKELVCPLDNFELLIFSLIGPEAKSFPLCPYCYNNPPFEGIDTLFGNLKT-G 1006
            PQ GT+KLYKEL CPLDNFEL+I+S+ G E KSFPLCPYCYN+PPFEG+DTLFG  KT  
Sbjct: 661  PQKGTVKLYKELTCPLDNFELVIYSVPGSEGKSFPLCPYCYNSPPFEGMDTLFGATKTPN 720

Query: 1005 ASGKLGKGAGMPCFLCPHPTCRHSVIAQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCL 826
             S K   G+GMPC LCPHPTC+HSV  QGVCACPEC+GTLVLDPVS PKW+L CN+C+C+
Sbjct: 721  ISAKNKTGSGMPCSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFPKWKLNCNLCSCI 780

Query: 825  VFLPQGAHRISTTRDRCPECDSTIIEVDFNKNTTPLSDGATLHVGCILCDELLHSLVEVK 646
            V LP+GAHRI+TT +RCPECDS IIE+DFNK  TPL +GATLH GC+LCDELL SLVEVK
Sbjct: 781  VLLPEGAHRIATTSNRCPECDSAIIEIDFNKKNTPLENGATLHQGCVLCDELLLSLVEVK 840

Query: 645  HGKSFFK--XXXXXXXXXXXXXXXXXGKLEDPKMSFR 541
            HG+SF +                    K  DPKMSFR
Sbjct: 841  HGRSFVRRGGRGRGRGRGRGRGGRRGSKGVDPKMSFR 877