BLASTX nr result
ID: Akebia23_contig00003513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00003513
(4148 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 1749 0.0
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 1731 0.0
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 1601 0.0
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 1594 0.0
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 1581 0.0
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 1575 0.0
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 1571 0.0
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 1563 0.0
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1556 0.0
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 1551 0.0
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 1519 0.0
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 1500 0.0
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 1494 0.0
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 1492 0.0
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 1490 0.0
emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 1459 0.0
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 1455 0.0
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 1455 0.0
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 1439 0.0
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 1438 0.0
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 1749 bits (4529), Expect = 0.0
Identities = 902/1405 (64%), Positives = 1071/1405 (76%), Gaps = 35/1405 (2%)
Frame = +2
Query: 35 VTKMAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGP 214
VT T G TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G
Sbjct: 47 VTAPVTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGS 106
Query: 215 LEDRTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQV 394
+++ T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ + V
Sbjct: 107 IDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLV 166
Query: 395 KKCALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQ 565
+K QLELI KGD+VGAK HV + + S +LKQ
Sbjct: 167 QKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226
Query: 566 HSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIK 742
WTSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+
Sbjct: 227 QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286
Query: 743 GSKLNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KG 910
GSKL + A+ S+ E EN ND GD VD+ + SS DG D+ K KG
Sbjct: 287 GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346
Query: 911 GYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSM 1090
EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL SG K YSM
Sbjct: 347 AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 406
Query: 1091 FFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWF 1270
FF+E +LVPPIKFRPPSKG SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW
Sbjct: 407 FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 466
Query: 1271 DLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPY 1447
DLQQSINVLF AG + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY
Sbjct: 467 DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 526
Query: 1448 LAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNR 1627
LAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL N+
Sbjct: 527 LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 586
Query: 1628 KIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHV 1807
K+R SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHV
Sbjct: 587 KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 646
Query: 1808 VRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGE 1987
VRVL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+
Sbjct: 647 VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 706
Query: 1988 PTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEA 2167
P RGLIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE
Sbjct: 707 PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSED 765
Query: 2168 EIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN- 2344
E++P+LPAI KP P+W+GKQVIT++LNHI TRG +P T EK GKI +EYFG + DE
Sbjct: 766 EMQPLLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKS 823
Query: 2345 ------------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTA 2452
LLI KNELV GVIDKAQF +YGLVH VQE YGS+TA
Sbjct: 824 GKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 883
Query: 2453 GILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKE 2632
GILLSVLSRLFTVFLQMHGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+
Sbjct: 884 GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 943
Query: 2633 GDIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCL 2812
G ID ++LQVE+EK I GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCL
Sbjct: 944 GKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCL 1003
Query: 2813 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2992
SLMTT+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DR
Sbjct: 1004 SLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDR 1063
Query: 2993 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3172
FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+
Sbjct: 1064 FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSI 1123
Query: 3173 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3349
VQF YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G K + YI++LP+ L +K
Sbjct: 1124 VQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKK 1178
Query: 3350 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3529
TK F+ ++++ +++K+KDF AQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1179 TKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTL 1238
Query: 3530 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3709
NTFH AG G +NVTLGIPRLQEILM A+ I+TP+MTCPL MG++ DDA+RLAA LKKV+
Sbjct: 1239 NTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVT 1298
Query: 3710 VADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3889
VADI ES+EVS+VPF+V+ HQ SIYKLKMKLY P LYPP + I+LEDC +T+E +FV E
Sbjct: 1299 VADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRE 1358
Query: 3890 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXX 4069
LE+ IQ HL++LSKISGIKN + ++S +SK+ DE +G +
Sbjct: 1359 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDG 1415
Query: 4070 XXXXLGVDAQKRRRQATDEMDYEDA 4144
LG+DAQKR++QA+DEMDY D+
Sbjct: 1416 GAEDLGLDAQKRKQQASDEMDYGDS 1440
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 1731 bits (4482), Expect = 0.0
Identities = 893/1401 (63%), Positives = 1062/1401 (75%), Gaps = 34/1401 (2%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA+ EG TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 1 MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ + V+K
Sbjct: 61 NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 574
QLELI KGD+VGAK HV + + S +LKQ W
Sbjct: 121 VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180
Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 751
TSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+GSK
Sbjct: 181 TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240
Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV---KGGYLY 922
L + + VD+ + SS DG D+ K KG
Sbjct: 241 LER---------------------PLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAP 279
Query: 923 PEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102
EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL SG K YSMFF+E
Sbjct: 280 IEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLE 339
Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQ 1282
+LVPPIKFRPPSKG SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW DLQQ
Sbjct: 340 TILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQ 399
Query: 1283 SINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459
SINVLF AG + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVN
Sbjct: 400 SINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVN 459
Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639
EIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL N+K+R
Sbjct: 460 EIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRI 519
Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819
SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL
Sbjct: 520 SISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 579
Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999
GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RG
Sbjct: 580 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRG 639
Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179
LIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE E++P
Sbjct: 640 LIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSEDEMQP 698
Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN----- 2344
+LPAI KP P+W+GKQVIT++LNHI TRG +P T EK GKI +EYFG + DE
Sbjct: 699 LLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGK 756
Query: 2345 --------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILL 2464
LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILL
Sbjct: 757 DPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILL 816
Query: 2465 SVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDID 2644
SVLSRLFTVFLQMHGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+ G ID
Sbjct: 817 SVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKID 876
Query: 2645 QMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMT 2824
++LQVE+EK I GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCLSLMT
Sbjct: 877 PVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMT 936
Query: 2825 TSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTG 3004
T+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTG
Sbjct: 937 TTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTG 996
Query: 3005 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFC 3184
L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF
Sbjct: 997 LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFN 1056
Query: 3185 YGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDF 3361
YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G K + YI++LP+ L +KTK F
Sbjct: 1057 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKF 1111
Query: 3362 LSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFH 3541
+ ++++ +++K+KDF AQPGEPVGV+AAQSVG+PSTQMTLNTFH
Sbjct: 1112 IEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFH 1171
Query: 3542 HAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADI 3721
AG G +NVTLGIPRLQEILM A+ I+TP+MTCPL MG++ DDA+RLAA LKKV+VADI
Sbjct: 1172 LAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADI 1231
Query: 3722 VESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEE 3901
ES+EVS+VPF+V+ HQ SIYKLKMKLY P LYPP + I+LEDC +T+E +FV ELE+
Sbjct: 1232 TESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDA 1291
Query: 3902 IQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXX 4081
IQ HL++LSKISGIKN + ++S +SK+ DE +G +
Sbjct: 1292 IQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDGGAED 1348
Query: 4082 LGVDAQKRRRQATDEMDYEDA 4144
LG+DAQKR++QA+DEMDY D+
Sbjct: 1349 LGLDAQKRKQQASDEMDYGDS 1369
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 1601 bits (4146), Expect = 0.0
Identities = 847/1403 (60%), Positives = 1023/1403 (72%), Gaps = 37/1403 (2%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA TEGAT+SVEAV F+F+T EEVR SF K+TN LLD + RP P GLYD +GPLED
Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
RT CKSCG CPGHCGHIDLVSP+YNPLLF L LLQR CFFCYHFR + +V++C
Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
QL+LI GDIVGAK G +NS+ +K WTSL
Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760
Q EAMS+L+ + + +CK C AKNP IT P FGW H+N M R N+I+G K+
Sbjct: 177 QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 934
+A +G E+ + SS+ VD + ++S + + G+ + K K + EF+
Sbjct: 237 TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293
Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114
KQK FSGPLLPSEVK KLLWENE +LCS+I DIQQ+ G K YSMFF+E +LV
Sbjct: 294 KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350
Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1291
PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N
Sbjct: 351 PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410
Query: 1292 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471
+LF + ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411 LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470
Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651
PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471 PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530
Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831
KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531 KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590
Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011
T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591 TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650
Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191
HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V SE + PI+PA
Sbjct: 651 HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710
Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2320
ILKP P+WTGKQVI+S+L+HI TRG P TV K+ KI +++F
Sbjct: 711 ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768
Query: 2321 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2458
G+K+ DE +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769 KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828
Query: 2459 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD 2638
LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+ +K E H + G K
Sbjct: 829 LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVN- 887
Query: 2639 IDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLS 2815
+ ELQ+EIE+ IR GE+A+T LDR M S LN+ +S V +EL +GL+K +NC+S
Sbjct: 888 -SETELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946
Query: 2816 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2995
LMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DRF
Sbjct: 947 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006
Query: 2996 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3175
L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+V
Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066
Query: 3176 QFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKT 3352
QF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L + DD K LP+ L K
Sbjct: 1067 QFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSKA 1122
Query: 3353 KDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLN 3532
+ F+ K+ +H K KDF AQPGEPVGV+AAQSVG+PSTQMTLN
Sbjct: 1123 EQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLN 1180
Query: 3533 TFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSV 3712
TFH AG G MNVTLGIPRLQEILM AS I+TPVMTCPL GKT +DA LA +KK++V
Sbjct: 1181 TFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITV 1240
Query: 3713 ADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGEL 3892
ADI+ES+EVSV PF+V + SIYKLKM L +P+ Y SDIT++DC ++V+F+ EL
Sbjct: 1241 ADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLREL 1300
Query: 3893 EEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXX 4072
E+ IQ HL++LSKISGIK + +Q +S ++DE + +S++
Sbjct: 1301 EDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEER 1360
Query: 4073 XXXLGVDAQKRRRQATDEMDYED 4141
LG+DAQK+++Q TDEMDYED
Sbjct: 1361 AEDLGLDAQKQKQQTTDEMDYED 1383
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 1594 bits (4127), Expect = 0.0
Identities = 854/1394 (61%), Positives = 1006/1394 (72%), Gaps = 32/1394 (2%)
Frame = +2
Query: 56 TEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLC 235
++GATES++++ FSFLT+EEVR SF KITNP LLD + RP P GLYDPA+GPL +RT+C
Sbjct: 8 SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67
Query: 236 KSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQL 415
K+CGQRS CPGHCGHIDLVSPVYNPLLF L LLQRTCF C+HFR+ R QV+KC QL
Sbjct: 68 KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127
Query: 416 ELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK--GLPRQVPNYNSKNLKQHSWTSLQY 589
ELI+KGDIVGAK H + V + ++ +Q WTSLQ+
Sbjct: 128 ELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQF 187
Query: 590 SEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLS 766
+EAMS+L+ + + +CK C + NP IT P FGWFH + M + RAN+I G +L L
Sbjct: 188 TEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLL 247
Query: 767 MGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKE 946
S G D DA G + GT +K + L EF +QK
Sbjct: 248 ----------------GSEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVL--EFTRQKS 289
Query: 947 FFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIK 1126
FS LLPSEVK ++LLW+NE ++CS I D+QQ+ K +MFF+E +LVPPIK
Sbjct: 290 TFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEFG--KRKAGPAMFFLETILVPPIK 347
Query: 1127 FRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGN 1306
FRPP+KGGDSVMEHPQTVLL+KV+ SNISL + H+N E SKIV RW DLQQSIN LF +
Sbjct: 348 FRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLF-D 405
Query: 1307 SKTA---GLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477
SKTA G RE A GICQLLEKKEG+FRQKMMGKRVNYACRSVISPDPY+ VNEIGIPP
Sbjct: 406 SKTAKGPGQREG-APGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPP 464
Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657
FA++LTYPERVTPWN+ KLR+A+ING+E HPGATHYVDKL+ KLPP RK R SISRKL
Sbjct: 465 CFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKL 524
Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837
SSRG V Q GK E E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTL
Sbjct: 525 PSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTL 584
Query: 1838 RMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014
RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQ++ P++GEP RGLIQDH
Sbjct: 585 RMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDH 644
Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194
IVSAVLLTKKDTFL+ +E+N LLYSSGVS + F +PGQKV SE EI+ + PAI
Sbjct: 645 IVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAI 704
Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------------ 2320
KP P+WTGKQVIT++LNHI T P TVEK KI +F
Sbjct: 705 WKPKPLWTGKQVITAILNHI--TSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKD 762
Query: 2321 ---GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTV 2491
++ DE +L+ KNELV GVIDK QFGEYGLVHTV E GS TAGILLSVLSRLFT
Sbjct: 763 APAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTA 822
Query: 2492 FLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEG--DIDQMELQVE 2665
+LQMHGFTCGVDDLLI+ D ER K+L+ +K GE H FIG K+ ID + +Q+
Sbjct: 823 YLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLN 882
Query: 2666 IEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKG 2842
IEK IR G+SA+ LDR MS+ELN TS V S L GLLKP KNC+SLMTTSGAKG
Sbjct: 883 IEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKG 942
Query: 2843 SLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEY 3022
S VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+R+GG+ITDRFLTGLRPQEY
Sbjct: 943 SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEY 1002
Query: 3023 YFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGV 3202
YFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGSVVQF YGEDGV
Sbjct: 1003 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGV 1062
Query: 3203 DVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTK 3379
DVH+TSF+ KF LA NQ + +R G + YI ELPEAL++K FL + +
Sbjct: 1063 DVHQTSFIAKFKELALNQDMIYKRSGGQLG----AFNSYISELPEALKEKADRFLDDFSI 1118
Query: 3380 QQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGA 3559
R + +L KR+D AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G
Sbjct: 1119 MGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGE 1178
Query: 3560 MNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEV 3739
MNVTLGIPRLQEILM AS I+TP+MTCPL G+T +DA LA L+KV+VADIVES+EV
Sbjct: 1179 MNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEV 1238
Query: 3740 SVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLI 3919
SVVPF+++ V IYKLKMKLYRP YP +++I++ED +T+EV+F+ ELE+ IQ H+
Sbjct: 1239 SVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMF 1298
Query: 3920 MLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQ 4099
+LS+ISGIK+ + ++S +S + DE G S + LG+DAQ
Sbjct: 1299 LLSRISGIKDFLPESRSRASGEADEDVAGDMSHR---EERDDDNDDDDGERADDLGLDAQ 1355
Query: 4100 KRRRQATDEMDYED 4141
KR+ QATDEMDY+D
Sbjct: 1356 KRKLQATDEMDYDD 1369
>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
sinensis]
Length = 1715
Score = 1581 bits (4094), Expect = 0.0
Identities = 837/1430 (58%), Positives = 1026/1430 (71%), Gaps = 64/1430 (4%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
M TTE TESV+AV FSFLT+EEVR SF K+ P+LLD +GRP P GLYDP +GPL++
Sbjct: 1 MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
+ CK+CGQR F CPGH GHIDLV PVYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61 TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 574
+LELIIKGDI+ AK + P NY N +NLK W
Sbjct: 121 VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180
Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 751
TSLQ++EA L + + + T+C C AKNP+I+ P FGW H+N MP+ RAN+I+G
Sbjct: 181 TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240
Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 925
L + G GEEE D A DVD+ + S + GT D+A + KG P
Sbjct: 241 LGETFSG-------GEEEK--DLGASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVP 291
Query: 926 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102
F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+ G K +S+FF+
Sbjct: 292 SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348
Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKI-VPRWFDLQ 1279
A+LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N + +KI V RW +LQ
Sbjct: 349 AVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKIIVTRWMNLQ 408
Query: 1280 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459
QS+NVLF AG R+ MA+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409 QSVNVLFDGKNAAGQRD-MASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467
Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639
EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R
Sbjct: 468 EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527
Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819
SI+RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528 SIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587
Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999
GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R
Sbjct: 588 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647
Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179
LIQDHIVSA LLTKKDTFL +E+ LLYSSGVS++ F+ KPGQ+V + SE E+ P
Sbjct: 648 LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707
Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------- 2320
+LPAI KP P+WTGKQVIT++LNHI TRG P VE+ GK+ +++F
Sbjct: 708 LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFVVERGGKLPQDFFKTRFNADKQSDRK 765
Query: 2321 ------------------GRKSD-----------------------EANLLIQKNELVHG 2377
G+K + E LLI KN+LV G
Sbjct: 766 KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825
Query: 2378 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2557
VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ +
Sbjct: 826 VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885
Query: 2558 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2734
ER L S++IG+ H + + ++G +ID ++L+ EIEKA+R G++A+ D M+S+
Sbjct: 886 ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945
Query: 2735 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2911
LN T S V +EL +GLLKP KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946 LNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005
Query: 2912 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3091
RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065
Query: 3092 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3271
LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125
Query: 3272 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3451
DA S+ YI ELP+AL+ + F + ++DF
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176
Query: 3452 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3631
AQPGEPVG++A+QSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236
Query: 3632 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYR 3811
V+TCPLL+GKT DDAKRLA LKK++VADIV+ I V V F+ Q S+Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACSVYVLTMELYK 1296
Query: 3812 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 3991
P+ YP ++DITLED + +EV+FV ELE+ IQ HL++LSKI+GIKN+ +S + D
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356
Query: 3992 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141
+ +G+ SQ LG+DA K++++ATDE DYED
Sbjct: 1357 QDGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYED 1403
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 1575 bits (4079), Expect = 0.0
Identities = 832/1364 (60%), Positives = 1004/1364 (73%), Gaps = 38/1364 (2%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA TEGAT+SVEAV F+F+T EEVR SF K+TN LLD + RP P GLYD +GPLED
Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
RT CKSCG CPGHCGHIDLVSP+YNPLLF L LLQR CFFCYHFR + +V++C
Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
QL+LI GDIVGAK G +NS+ +K WTSL
Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760
Q EAMS+L+ + + +CK C AKNP IT P FGW H+N M R N+I+G K+
Sbjct: 177 QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 934
+A +G E+ + SS+ VD + ++S + + G+ + K K + EF+
Sbjct: 237 TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293
Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114
KQK FSGPLLPSEVK KLLWENE +LCS+I DIQQ+ G K YSMFF+E +LV
Sbjct: 294 KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350
Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1291
PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N
Sbjct: 351 PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410
Query: 1292 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471
+LF + ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI
Sbjct: 411 LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470
Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651
PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR
Sbjct: 471 PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530
Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831
KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 531 KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590
Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011
T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD
Sbjct: 591 TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650
Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191
HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V SE + PI+PA
Sbjct: 651 HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710
Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2320
ILKP P+WTGKQVI+S+L+HI TRG P TV K+ KI +++F
Sbjct: 711 ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768
Query: 2321 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2458
G+K+ DE +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI
Sbjct: 769 KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828
Query: 2459 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EG 2635
LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+ +K E H + G K
Sbjct: 829 LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNS 888
Query: 2636 DIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCL 2812
+ ELQ+EIE+ IR GE+A+T LDR M S LN+ +S V +EL +GL+K +NC+
Sbjct: 889 ETAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCI 948
Query: 2813 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2992
SLMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DR
Sbjct: 949 SLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDR 1008
Query: 2993 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3172
FL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+
Sbjct: 1009 FLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSI 1068
Query: 3173 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3349
VQF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L + DD K LP+ L K
Sbjct: 1069 VQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSK 1124
Query: 3350 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3529
+ F+ K+ +H K KDF AQPGEPVGV+AAQSVG+PSTQMTL
Sbjct: 1125 AEQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1182
Query: 3530 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3709
NTFH AG G MNVTLGIPRLQEILM AS I+TPVMTCPL GKT +DA LA +KK++
Sbjct: 1183 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1242
Query: 3710 VADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3889
VADI+ES+EVSV PF+V + SIYKLKM L +P+ Y SDIT++DC ++V+F+ E
Sbjct: 1243 VADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRE 1302
Query: 3890 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQ 4021
LE+ IQ HL++LSKISGIK + +Q +S ++DE + +S++
Sbjct: 1303 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRE 1346
>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
gi|557523327|gb|ESR34694.1| hypothetical protein
CICLE_v10004132mg [Citrus clementina]
Length = 1715
Score = 1571 bits (4068), Expect = 0.0
Identities = 833/1430 (58%), Positives = 1022/1430 (71%), Gaps = 64/1430 (4%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
M TTE TESV+AV FSFLT+EEVR SF K+T P+LLD + RP P GLYDP +GPL++
Sbjct: 1 MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
+ CK+CGQR F CPGH GHIDLV VYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC
Sbjct: 61 TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 574
+LELIIKGDI+ AK + P NY N +NLK W
Sbjct: 121 VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180
Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 751
TSLQ++EA L + + + T+C C AKNP+I+ P FGW H+N MP+ RAN+I+G
Sbjct: 181 TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240
Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 925
L + G GEEE D DVD+ + S + GT D+A + KG P
Sbjct: 241 LGETFSG-------GEEEK--DLGTSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVP 291
Query: 926 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102
F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+ G K +S+FF+
Sbjct: 292 SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348
Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSK-IVPRWFDLQ 1279
+LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N + +K IV RW +LQ
Sbjct: 349 VVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVIVARWMNLQ 408
Query: 1280 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459
QS+NVLF AG R+ +A+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN
Sbjct: 409 QSVNVLFDGKNAAGQRD-VASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467
Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639
EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R
Sbjct: 468 EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527
Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819
SI RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL
Sbjct: 528 SIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587
Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999
GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R
Sbjct: 588 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647
Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179
LIQDHIVSA LLTKKDTFL +E+ LLYSSGVS++ F+ KPGQ+V + SE E+ P
Sbjct: 648 LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707
Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------GRK 2329
+LPAI KP P+WTGKQVIT++LNHI TRG P VE+ GK+ +++F GRK
Sbjct: 708 LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFIVERGGKLPQDFFKTRFNADKQSGRK 765
Query: 2330 SD--------------------------------------------EANLLIQKNELVHG 2377
+ E LLI KN+LV G
Sbjct: 766 KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825
Query: 2378 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2557
VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ +
Sbjct: 826 VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885
Query: 2558 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2734
ER L S++IG+ H + + ++G +ID ++L+ EIEKA+R G++A+ D M+S+
Sbjct: 886 ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945
Query: 2735 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2911
LN T S V ++L +GLLKP KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP
Sbjct: 946 LNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005
Query: 2912 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3091
RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY
Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065
Query: 3092 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3271
LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ +
Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125
Query: 3272 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3451
DA S+ YI ELP+AL+ + F + ++DF
Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176
Query: 3452 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3631
AQPGEPVG++AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL AS+ I+TP
Sbjct: 1177 SLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236
Query: 3632 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYR 3811
V+TCPLL+GKT DDAKRLA LKK++VADIV+ I V V F+ Q ++Y L M+LY+
Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACTVYVLTMELYK 1296
Query: 3812 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 3991
P+ YP ++DITLED + +EV+FV ELE+ IQ HL++LSKI+GIKN+ +S + D
Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356
Query: 3992 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141
+ +G+ SQ LG+DA K++++ATDE DYED
Sbjct: 1357 QEGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYED 1403
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 1563 bits (4046), Expect = 0.0
Identities = 842/1396 (60%), Positives = 1001/1396 (71%), Gaps = 30/1396 (2%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA TTEGA+ESV+ V FSF+TNEEVR S K+T PILLD +GRP GLYDPAMG L++
Sbjct: 1 MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
TLCKSCGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR V+ C
Sbjct: 61 TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
LELI+ G+I AK ++ Y KN + +WTSL
Sbjct: 121 KTLLELILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSL 171
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760
Q+SEA+S++ + + +++ CK CGAK+PKIT P FGWFH+ + RAN I+ SK
Sbjct: 172 QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940
+S G A+ S+ EEE +++ D + PE Q
Sbjct: 232 VSSG-AEGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQ 265
Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120
K F SG LLPSEVK+ +K LW+NE LCS I DI Q+ G K +SMFF+E++LVPP
Sbjct: 266 KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPP 322
Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300
IKFRPP+KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV W DLQQSIN+LF
Sbjct: 323 IKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILF 382
Query: 1301 GNSKTAGLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477
+ AG +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP
Sbjct: 383 DSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 442
Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISR 1651
YFALRLTYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL P+RK R SISR
Sbjct: 443 YFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISR 502
Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831
KL SSRGVV G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 503 KLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEK 561
Query: 1832 TLRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ 2008
T+RMHYANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQ
Sbjct: 562 TIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQ 621
Query: 2009 DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILP 2188
DHI+SAVLLTKKDTFL ++E++ LLYSSG+S + S KPGQK+ ++ +AE+ P+LP
Sbjct: 622 DHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLP 681
Query: 2189 AILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF---------------- 2320
A+ KP P+WTGKQV+T+LL+HI T+G P VEK KI + +F
Sbjct: 682 AVWKPEPLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHT 739
Query: 2321 ------GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRL 2482
+ D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRL
Sbjct: 740 KVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRL 799
Query: 2483 FTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQ 2659
FTVFLQ HGFTCGVDDLL+++ +D ER K+LQ +KIGE+ H F+ K+G+ +D M LQ
Sbjct: 800 FTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 859
Query: 2660 VEIEKAIRIKGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSG 2833
+ IEK I GE+A+T LDR M+S+LN+ T S V +L +GLLKP KNC+SLMTTSG
Sbjct: 860 LNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 919
Query: 2834 AKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRP 3013
AKG NF QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRP
Sbjct: 920 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 979
Query: 3014 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGE 3193
QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGE
Sbjct: 980 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGE 1039
Query: 3194 DGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNL 3373
DGVDVHKT+F+TKF+ LAANQ +L H K + +I ELP AL +K + ++L
Sbjct: 1040 DGVDVHKTAFITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSL 1096
Query: 3374 TKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3553
+K + L L ++DF AQPGEPVGV+AAQS+G+PSTQMTLNTFHH G
Sbjct: 1097 SKDKVPGLVL--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGR 1154
Query: 3554 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3733
G MNVTLGI RLQEILM AS+ I+TP+MTCPL G + D AK LA LKK++VADI+ES+
Sbjct: 1155 GEMNVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESM 1214
Query: 3734 EVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3913
V+VVPFS +K ++ SIYKL++ Y E I+ ED T+E +F+ ELE I+
Sbjct: 1215 NVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIERE 1274
Query: 3914 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVD 4093
+++LSKI+GIKN V +Q SK EGD S S+Q LG D
Sbjct: 1275 MVLLSKINGIKNFVPDSQ---SKGSSEGDEVSSSRQ--KENDDDDDEGNDLDVAEDLGSD 1329
Query: 4094 AQKRRRQATDEMDYED 4141
+K++ QA DEMDYED
Sbjct: 1330 MKKQKLQANDEMDYED 1345
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 1556 bits (4030), Expect = 0.0
Identities = 840/1387 (60%), Positives = 998/1387 (71%), Gaps = 27/1387 (1%)
Frame = +2
Query: 62 GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 241
GA+ESV+ V FSF+TNEEVR S K+T PILLD +GRP GLYDPAMG L++ TLCKS
Sbjct: 13 GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72
Query: 242 CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 421
CGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR V+ C LEL
Sbjct: 73 CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132
Query: 422 IIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 601
I+ G+I AK ++ Y KN + +WTSLQ+SEA+
Sbjct: 133 ILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSLQFSEAI 183
Query: 602 SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 778
S++ + + +++ CK CGAK+PKIT P FGWFH+ + RAN I+ SK +S G A
Sbjct: 184 SVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG-A 242
Query: 779 KRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 958
+ S+ EEE +++ D + PE QK F SG
Sbjct: 243 EGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQKNFSSG 277
Query: 959 PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPP 1138
LLPSEVK+ +K LW+NE LCS I DI Q+ G K +SMFF+E++LVPPIKFRPP
Sbjct: 278 HLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPP 334
Query: 1139 SKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTA 1318
+KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV W DLQQSIN+LF + A
Sbjct: 335 AKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAA 394
Query: 1319 GLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL 1495
G +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 395 GPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 454
Query: 1496 TYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISRKLHSSR 1669
TYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL P+RK R SISRKL SSR
Sbjct: 455 TYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSR 514
Query: 1670 GVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHY 1849
GVV G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKT+RMHY
Sbjct: 515 GVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHY 573
Query: 1850 ANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2026
ANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQDHI+SA
Sbjct: 574 ANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISA 633
Query: 2027 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2206
VLLTKKDTFL ++E++ LLYSSG+S + S KPGQK+ ++ +AE+ P+LPA+ KP
Sbjct: 634 VLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPE 693
Query: 2207 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKI-------------KKEYF------GRK 2329
P+WTGKQV+T+LL+HI T+G P VEK KI KKE+ +
Sbjct: 694 PLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAAR 751
Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509
D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRLFTVFLQ HG
Sbjct: 752 LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHG 811
Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686
FTCGVDDLL+++ +D ER K+LQ +KIGE+ H F+ K+G+ +D M LQ+ IEK I
Sbjct: 812 FTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISY 871
Query: 2687 KGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFT 2860
GE+A+T LDR M+S+LN+ T S V +L +GLLKP KNC+SLMTTSGAKG NF
Sbjct: 872 NGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQ 931
Query: 2861 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMA 3040
QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRPQEYYFHCMA
Sbjct: 932 QISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMA 991
Query: 3041 GREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTS 3220
GREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGEDGVDVHKT+
Sbjct: 992 GREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTA 1051
Query: 3221 FVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3400
F+TKF+ LAANQ +L H K + +I ELP AL +K + ++L+K + L
Sbjct: 1052 FITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLV 1108
Query: 3401 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3580
L ++DF AQPGEPVGV+AAQS+G+PSTQMTLNTFHHAG G MNVTLGI
Sbjct: 1109 L--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGI 1166
Query: 3581 PRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSV 3760
PRLQEILM AS+ I+TP+MTCPL G + D AK LA LKK++VADI+ES+ V+VVPFS
Sbjct: 1167 PRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQ 1226
Query: 3761 KKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISG 3940
+K ++ SIYKL++ Y E I+ ED T+E +F+ ELE I+ +++LSKI+G
Sbjct: 1227 RKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKING 1286
Query: 3941 IKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQAT 4120
IK V +Q SK EGD S S+Q LG D +K++ QA
Sbjct: 1287 IKXFVPDSQ---SKGSSEGDEVSSSRQ---EEMDDDDEGNDLDVAEDLGSDXEKQKLQAN 1340
Query: 4121 DEMDYED 4141
DEMDYED
Sbjct: 1341 DEMDYED 1347
>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1651
Score = 1551 bits (4015), Expect = 0.0
Identities = 825/1390 (59%), Positives = 996/1390 (71%), Gaps = 24/1390 (1%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
M TTEGAT SVEAV FSFLT++E+R S KIT+PIL+D L P PDGLYD A+GP +D
Sbjct: 1 MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
++LCKSCGQ S CPGH GHI+LVSPVYNPL+F IL N+LQRTCF C+HFR ++V
Sbjct: 61 KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
QLELI+KGDI+ AK G + Y+++ L ++ WTSL
Sbjct: 121 TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-WTSL 179
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNK-YTRANIIKGSKLNK 760
Q+SEAMS+L +L+T + +C++CGAKNPKI+ P FGWFH+N+ + TRA+ I+
Sbjct: 180 QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSV---- 235
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940
E E ND ++G D+TD E D +K K Y L +
Sbjct: 236 ------------ESETTNDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYK----LAE 279
Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120
+ SG LLPS+VK ++LLWENE +LCS I DIQ + G K +SMFF+E + VPP
Sbjct: 280 QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPP 336
Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300
IKFRPP+KGGD+VMEHPQTVLL KV+ NISL + H+N S+ SK++ RW DLQQS+N+LF
Sbjct: 337 IKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLF 396
Query: 1301 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480
N KTA + ++ATGICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPY
Sbjct: 397 DN-KTASGKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 455
Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660
FALRL+YPERVTPWNV KLR+AI+NG E HPGATHY DK++ VKLPP K+ + SRKL
Sbjct: 456 FALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLP 515
Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840
+SRGV+ GK +HE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GEKT+R
Sbjct: 516 TSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVR 575
Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2020
MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 576 MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 635
Query: 2021 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2200
SA LLTKKDTFL++EE+N LLYSSGVS A F K GQKV + NSE+E+ PAI K
Sbjct: 636 SAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWK 695
Query: 2201 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGR-----------------K 2329
P P+WTGKQVI++LL +I TRG P T EK+ KI +F K
Sbjct: 696 PEPLWTGKQVISALLYYI--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDK 753
Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509
DE LLI KN+LV GV+DKAQFG+YG++HTVQE YGS+ AG LLS LSRLFT FLQMHG
Sbjct: 754 PDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHG 813
Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686
FTCGVDDL++ + D+ERM +L+ + IG+ H +FIG K D ID + LQ+ IEK IR
Sbjct: 814 FTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRS 873
Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863
GE+A+T LDR M+S LN TS + +L +G+LKP KNC+SLMTTSGAKGS+VNF Q
Sbjct: 874 NGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQ 932
Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043
ISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLT L PQEYYFHCMAG
Sbjct: 933 ISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAG 992
Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223
REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 993 REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1052
Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403
+T+F L+ N+ E + ++ +S YI +LPEALE K + F ++ +L
Sbjct: 1053 ITEFGALSTNK---ELVFSNYCRQLDRSSPYINKLPEALEGKAEKF------SKQRNLGS 1103
Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583
++ DF AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1104 MEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1163
Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763
RLQEILM A+ I+TP MTCPL K+ DA LA LKK++VADI++S++VSVVP +V
Sbjct: 1164 RLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVL 1223
Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943
QV SIYKL MKLY+ + YP ++DITL+D +T+ V FV ELE+ IQ H+ +LSKISGI
Sbjct: 1224 GGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGI 1283
Query: 3944 KNIVLSAQSGSSKDIDE----GDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRR 4111
K QS S ++ G K Q LG DAQKR+
Sbjct: 1284 KKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKL 1343
Query: 4112 QATDEMDYED 4141
Q TDE+DYED
Sbjct: 1344 QGTDEVDYED 1353
>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
gi|561018822|gb|ESW17626.1| hypothetical protein
PHAVU_007G255400g [Phaseolus vulgaris]
Length = 1637
Score = 1519 bits (3934), Expect = 0.0
Identities = 814/1391 (58%), Positives = 989/1391 (71%), Gaps = 25/1391 (1%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
M TEG T SV+AVGFSFLT++E+ S KITNPILL+ L P GLYDPA+GPL+D
Sbjct: 1 MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
++LCKSCGQ S CPGH GHI+LVSPVYNPL+F IL ++LQRTCF C+HF +R++V+
Sbjct: 61 KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQ--HSWT 577
Q ELI+KGDI+ AK S+ ++Q +W+
Sbjct: 121 TSQFELIMKGDIIRAKSLDSIISDESNHSGDGD--------------ESQGVEQLGENWS 166
Query: 578 SLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKL 754
SLQ+SEAMS+L + + + +C+ CG NP+I+ P FGWFH+N + + RAN ++
Sbjct: 167 SLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRAL-- 224
Query: 755 NKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFL 934
E E ND ++G ++T+ E + GT K K G L +
Sbjct: 225 --------------ESETINDDMSLGGGETTEEED--ITSTGTA-KRDKRKKGKLSSKLA 267
Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114
Q + SG LLPS+VK ++LLWENE +LCS I DIQ + G K +SMFF+E + V
Sbjct: 268 AQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFV 323
Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1294
PPIKFRPP+KGGD VMEHPQTVLL KV+ NISL + H+N + SK++ RW DLQQS+N+
Sbjct: 324 PPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNL 383
Query: 1295 LFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1474
LF N KT+G E +A GICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIP
Sbjct: 384 LFDN-KTSGQGE-VAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 441
Query: 1475 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1654
PYFALRL+YPERVTPWNV LR+AI+NG + HPGATHY D+ ATVKLPPN K+ + ISRK
Sbjct: 442 PYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRK 501
Query: 1655 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1834
L SSRGV+ GK + E EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 502 LPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 561
Query: 1835 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014
+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDH
Sbjct: 562 VRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDH 621
Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194
IVSA LLTKKDTF+T+E + LLYSSGVS FS K GQKV + NSE E+ PAI
Sbjct: 622 IVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAI 681
Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK--------- 2329
KP P+WTGKQVI++LL +I TR P TVEK+ KI +F G++
Sbjct: 682 WKPEPLWTGKQVISALLYYI--TRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNK 739
Query: 2330 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2500
DE LLI KN+LV GV+DKAQFG+YG++HTVQE YGS AG LLS LSRLFT FLQ
Sbjct: 740 VEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQ 799
Query: 2501 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2677
MHGFTCGVDDL+I +E D+ERM +L+ ++IG+ H +FIG D ID + LQ+ IEK
Sbjct: 800 MHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKK 859
Query: 2678 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2854
IR GE+A+T LDR M+S LN TS + +L G+LKP KNC+SLMTTSGAKGS+VN
Sbjct: 860 IRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVN 919
Query: 2855 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3034
F QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL PQEYYFHC
Sbjct: 920 FQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHC 979
Query: 3035 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3214
MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH
Sbjct: 980 MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHH 1039
Query: 3215 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3394
TSF+ KF+ L+ N+ ++ G+ +S YI +LP+AL++K ++F + KQ+ +
Sbjct: 1040 TSFINKFEALSTNKELV--YGNCCRQLD-RSSPYINKLPDALKEKAENFFRDSLKQR--N 1094
Query: 3395 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3574
L KR +F AQPGE VGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1095 LGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1154
Query: 3575 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPF 3754
GIPRLQEI+M A+ I+TP MTCPL K+ ++A LA LKK++VADI++S++VSVVP
Sbjct: 1155 GIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPV 1214
Query: 3755 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3934
SV QV SIYKL MKLY+P+ YP +SDITLED T+ + FV ELE+ I+ H+ +LSKI
Sbjct: 1215 SVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKI 1274
Query: 3935 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQ--VXXXXXXXXXXXXXXXXXXXLGVDAQKRR 4108
SGIK QS S+ D GS+S+ LG DAQKR+
Sbjct: 1275 SGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRK 1334
Query: 4109 RQATDEMDYED 4141
RQ TDE+DYED
Sbjct: 1335 RQGTDEVDYED 1345
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 1500 bits (3884), Expect = 0.0
Identities = 783/1392 (56%), Positives = 992/1392 (71%), Gaps = 31/1392 (2%)
Frame = +2
Query: 59 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 238
+GA+E+VEAV FSF+T+EEVR S K+T+P LLD L P P+GLYDPAMGPL+ + CK
Sbjct: 3 QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62
Query: 239 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 418
C Q + C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC +LE
Sbjct: 63 FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120
Query: 419 LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNL-KQHSWTSLQYSE 595
LI KGD+VGAK H+ + + + K+ SW + Q++E
Sbjct: 121 LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180
Query: 596 AMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNKLSMG 772
AM+++D ++ + +C C AKNPKI P+FG FH+++ NK R N I G + N G
Sbjct: 181 AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240
Query: 773 KAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLKQKEF 949
++ N + E NA + +G+ +++ +S DG +S A+K +GG +QK+
Sbjct: 241 GSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKARKRQGGDQSDVVEQQKDS 295
Query: 950 FSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKF 1129
FS LPS+V++ ++ LWENE LC+ CDIQ + + SG SMFF++++LVPPIKF
Sbjct: 296 FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355
Query: 1130 RPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNS 1309
RPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R DLQQS+NVLF +
Sbjct: 356 RPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415
Query: 1310 KTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFA 1486
+G ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFA
Sbjct: 416 TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475
Query: 1487 LRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSS 1666
LRLTYPER+TPWN K+RDA+ING E HPGA + D++ATVKLP N+K+R +ISRKL SS
Sbjct: 476 LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535
Query: 1667 RGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMH 1846
RG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTLRMH
Sbjct: 536 RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595
Query: 1847 YANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2026
YANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+ RGLIQDHIV A
Sbjct: 596 YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655
Query: 2027 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2206
V+LT K+TFLT E+N LLY SGV AA S KVSV++ E ++ +LPA+ KP
Sbjct: 656 VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715
Query: 2207 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS---------------DEA 2341
P+WTGKQVIT+LLNH+ T+G P TV+ GKI YF +S E
Sbjct: 716 PLWTGKQVITALLNHL--TKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAEN 773
Query: 2342 NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCG 2521
LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HGFTCG
Sbjct: 774 EFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCG 833
Query: 2522 VDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIKGESA 2701
VDDL+I+ D+ R ++L+ D +GEE H F+ K G+I +ELQ+EIEKA+ E+A
Sbjct: 834 VDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAA 892
Query: 2702 ITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLG 2881
LD M ++L + S N EL KGLLKPFP+NC++LMT +GAKGS VNF QISS LG
Sbjct: 893 TAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLG 952
Query: 2882 QQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVD 3061
QQ+LEGKRVPRMVSGKTLPCFPPWD ASRAGG+++DRFL+GLRPQEYYFHCMAGREGLVD
Sbjct: 953 QQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVD 1012
Query: 3062 TAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDT 3241
TAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+ F
Sbjct: 1013 TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKA 1072
Query: 3242 LAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRK-- 3415
L NQ + + H K + YI++LP+ LE+K K F TK+ L +K
Sbjct: 1073 LKNNQETICQKLRH----GRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEE 1128
Query: 3416 ----------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMN 3565
DF A GEPVGV+A QSVG+PSTQMTLNTFH AG G MN
Sbjct: 1129 MVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMN 1188
Query: 3566 VTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSV 3745
VTLGIPRLQEILM ASE I+TP++TCP L ++ +DA+ L A +KK++VAD++ES+EV +
Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKL 1248
Query: 3746 VPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIML 3925
+P S+ HQVS +YKL +KL + + ++ EDC T++ +F+ ELE+ I++HL +L
Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALL 1302
Query: 3926 SKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKR 4105
SKI+GI+N S++S S + +E + ++ ++ L DAQKR
Sbjct: 1303 SKINGIQNFKTSSESVDSDETEENASSTRHEE------EMLDDEDEDERTEDLSSDAQKR 1356
Query: 4106 RRQATDEMDYED 4141
++Q TDEMDY+D
Sbjct: 1357 KQQTTDEMDYDD 1368
>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1650
Score = 1494 bits (3869), Expect = 0.0
Identities = 799/1386 (57%), Positives = 986/1386 (71%), Gaps = 20/1386 (1%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA TEGAT SV+AV FSFLT+EE+ S KITNPILLD L P GLYDPA+GP +
Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
++ C+SCGQ S+ CPGH GHI+LVSPVYNPL+F +L N+L+RTCF C+HF+ +R +V+
Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
A QLELI+KG+I AK G Q +S +WTSL
Sbjct: 121 ANQLELIMKGNIAKAKNLDAINLDESADLSD-------GNDSQC---SSDEQLGENWTSL 170
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760
Q+SEAMS+L + + + +C+ CG NPKIT P FGWFHV + RAN+I G +
Sbjct: 171 QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASL 230
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940
S E +D ++G+ D+TD E + T +S K + L +
Sbjct: 231 AS------------EIIHDDISLGNGDTTDVED--ITSGDTANSNAKRQNK------LAR 270
Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120
SG LLPS+V+ ++LLWENE +LC I DIQ + G K +SMFF++ + VPP
Sbjct: 271 HNKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPP 327
Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300
IKFRPP+KG D V EH QTVLL +V+ SNISL H+N S+ S ++ RW DLQ+S+N+LF
Sbjct: 328 IKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLF 387
Query: 1301 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480
N KTA ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY
Sbjct: 388 DN-KTASGQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 446
Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660
FALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+ SRKL
Sbjct: 447 FALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQ 506
Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840
SSRGV+ GK ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+R
Sbjct: 507 SSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVR 566
Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2020
MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV
Sbjct: 567 MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 626
Query: 2021 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2200
SA LLTKKDTFL+ EE+N LLYSSGVS F KPGQK+ + NS++E+ PAI K
Sbjct: 627 SAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFK 686
Query: 2201 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK----------- 2329
P P+WTGKQVI++LL +I T+G P TVEK+ KI +F G+K
Sbjct: 687 PEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDE 744
Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509
DE LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 745 PDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 804
Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686
FTCGVDDLL+ + D ER +L+ ++IG+ H +FIG EGD ID + +Q+ +EK IR
Sbjct: 805 FTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRS 864
Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863
GE+AIT LDR M S LN TS V L +G+LKP KN +SLMTTSGAKGS+VNF Q
Sbjct: 865 NGEAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQ 924
Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043
ISS LGQQ+LEGKRVPRMVSGKTLPCF WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 925 ISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 984
Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223
REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF
Sbjct: 985 REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1044
Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403
+ KF+ L+ N+ ++ D KS YI +LP+AL+ K + F+ + + +QR+S +
Sbjct: 1045 INKFEALSTNKELVYSNCCRELD---KSSPYINKLPDALKGKAEKFILDSSSKQRNSGSM 1101
Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583
+F AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1102 -THTNFLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1160
Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763
RLQEIL AS I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP +V+
Sbjct: 1161 RLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQ 1220
Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943
++ SIYKL MKL++P+ YP ++D+TL+D +T+ V FV LE+ I+ ++ +L+KISGI
Sbjct: 1221 DGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1280
Query: 3944 KNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATD 4123
N AQ SS ++ + K+ LG+DAQK +RQ D
Sbjct: 1281 TNFKTDAQPNSSNGAEDDPSNGKTND----DDDDDGDADDTEGAEDLGLDAQKSKRQVVD 1336
Query: 4124 EMDYED 4141
++DY+D
Sbjct: 1337 DVDYDD 1342
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 1492 bits (3863), Expect = 0.0
Identities = 781/1396 (55%), Positives = 988/1396 (70%), Gaps = 35/1396 (2%)
Frame = +2
Query: 59 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 238
+GA+E+VEAV FSF+T+EEVR S K+T+P LLD L P P+GLYDPAMGPL+ + CK
Sbjct: 3 QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62
Query: 239 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 418
C Q + C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC +LE
Sbjct: 63 FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120
Query: 419 LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLP-----RQVPNYNSKNLKQHSWTSL 583
LI KGD+VGAK H+ R YN K+ SW +
Sbjct: 121 LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN----KRPSWDNF 176
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNK 760
Q++EAM+++D ++ + +C C AKNPKI P+FG FH+++ NK R N I G + N
Sbjct: 177 QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNL 236
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLK 937
G ++ N + E NA + +G+ +++ +S DG +S +K +GG +
Sbjct: 237 HDTGGSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKGRKRQGGDQSDVVEQ 291
Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117
QK+ FS LPS+V++ ++ LWENE LC+ CDIQ + + SG SMFF++++LVP
Sbjct: 292 QKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVP 351
Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297
P+KFRPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R DLQQS+NVL
Sbjct: 352 PVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVL 411
Query: 1298 FGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1474
F + +G ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIP
Sbjct: 412 FDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIP 471
Query: 1475 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1654
PYFA RLTYPER+TPWN K+RDA+ING E HPGA + D++ATVKLP N+K+R +ISRK
Sbjct: 472 PYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRK 531
Query: 1655 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1834
L SSRG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKT
Sbjct: 532 LPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591
Query: 1835 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014
LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+ RGLIQDH
Sbjct: 592 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDH 651
Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194
IV AV+LT K+TFL+ E+N LLY SGV AA S KVS+++ E ++ +LPA+
Sbjct: 652 IVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAV 711
Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS-------------- 2332
KP P+WTGKQVIT+LLNH+ T G P TV+ GKI YF +S
Sbjct: 712 WKPKPLWTGKQVITALLNHL--TNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDR 769
Query: 2333 -DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509
E LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HG
Sbjct: 770 TAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHG 829
Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIK 2689
FTCG+DDL+I+ D+ R ++L+ D +GEE H F+ K G+I +ELQ+EIEKAI
Sbjct: 830 FTCGIDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSN 888
Query: 2690 GESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQIS 2869
E A LD M ++L + S N EL KGLLKPFP+NC++LMT +GAKGS VNF QIS
Sbjct: 889 KEVATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQIS 948
Query: 2870 SLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGRE 3049
S LGQQ+LEGKRVPRMVSGKTLPCFP WD ASRAGG+++DRFL+GLRPQEYYFHCMAGRE
Sbjct: 949 SYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGRE 1008
Query: 3050 GLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVT 3229
GLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+
Sbjct: 1009 GLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLK 1068
Query: 3230 KFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRK 3409
F L NQ + + H K + YI++LP+ L +K K F + TK+ L +
Sbjct: 1069 NFKALKNNQETICQKLRH----GCKLNSYIEKLPDGLGEKVKHFWESKTKKLEKKLGMLV 1124
Query: 3410 RK------------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3553
+K DF A GEPVGV+A QSVG+PSTQMTLNTFH AG
Sbjct: 1125 KKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGR 1184
Query: 3554 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3733
G MNVTLGIPRLQEILM ASE I+TP+MTCP L K+ +DA+ L A +KK++VAD++ES+
Sbjct: 1185 GEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESM 1244
Query: 3734 EVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3913
EV ++P S+ HQVS +YKL +KL + + ++ EDC T++ +F+ ELE+ I++H
Sbjct: 1245 EVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESH 1298
Query: 3914 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVD 4093
L +LSKI+GI+N S++S S + +E + ++ ++ L D
Sbjct: 1299 LALLSKINGIQNFKTSSESVDSDETEENASSTRREE----EMLDDDDDDEDERTEDLSSD 1354
Query: 4094 AQKRRRQATDEMDYED 4141
AQKR++Q TDEMDY+D
Sbjct: 1355 AQKRKQQTTDEMDYDD 1370
>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
arietinum]
Length = 1660
Score = 1490 bits (3857), Expect = 0.0
Identities = 792/1389 (57%), Positives = 984/1389 (70%), Gaps = 23/1389 (1%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA TEGAT SV+AV FSFLT+EE+ S KITNPILLD L P GLYDPA+GP +
Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
++ C+SCGQ S+ CPGH GHI+LVSP YNPL+F +L N+L+RTCF C+HF+ +R++V+
Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583
A QLELI+KG+I AK +S +WTSL
Sbjct: 121 ANQLELIMKGNIAKAKNLDEINLDESADLCDG----------DDSQCSSAEQLGENWTSL 170
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760
Q+SEAMS+L + + + +C+ CG NPKIT P FGWFHV + RAN+I G+ ++
Sbjct: 171 QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSL 230
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAE--SSGVVYDGTPDSAQKVKGGYLYPEFL 934
S E +D ++G+ D+TD E +SG + + K K
Sbjct: 231 AS------------EIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEK--------Q 270
Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114
+G LLPS+V+ ++LLWEN+ +LC I DIQ + G K +SMFF+E + V
Sbjct: 271 ISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYV 327
Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1294
PPIKFRPP+KG D V EH QTVLL +V+ SNISL H+N S+ S ++ RW DLQ+S+N+
Sbjct: 328 PPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNL 387
Query: 1295 LFGNSKTAG-LRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471
LF N +G ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI
Sbjct: 388 LFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 447
Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651
PPYFALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+ SR
Sbjct: 448 PPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSR 507
Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831
+L SSRGV+ GK ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEK
Sbjct: 508 RLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 567
Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011
T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQD
Sbjct: 568 TVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQD 627
Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191
HIVSA LLTKKDTFL+ EE+N LLYSSGVS F KPGQK+ + NS++E+ PA
Sbjct: 628 HIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPA 687
Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK-------- 2329
I KP P+WTGKQVI++LL +I T+G P TVEK+ KI +F G+K
Sbjct: 688 IFKPEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIK 745
Query: 2330 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2500
DE LLI KN+LV GV+DKAQFG+YG+VHTVQEFYGS+TAG LLS LSRLFT FLQ
Sbjct: 746 KDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQ 805
Query: 2501 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2677
MHGFTCGVDDLL+ + D ER +L+ ++IG+ H +FIG EGD ID + +Q+ +EK
Sbjct: 806 MHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKK 865
Query: 2678 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2854
IR GE+AIT LDR M S LN TS V EL +G+LKP KN +SLMTTSGAKGS+VN
Sbjct: 866 IRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVN 925
Query: 2855 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3034
F QISS LGQQ+LEGKRVPRMVSGKTLPCF WD + RAGGFI DRFLT LRPQEYYFHC
Sbjct: 926 FQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHC 985
Query: 3035 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3214
MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+
Sbjct: 986 MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1045
Query: 3215 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3394
TSF+ KF+ L+ N+ ++ D +S YI +LP+AL+ K + F+ + + +QR+S
Sbjct: 1046 TSFINKFEALSTNKELVYSNCCRELD---ESSPYINKLPDALKGKAEKFIRDSSSKQRNS 1102
Query: 3395 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3574
+ +F AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTL
Sbjct: 1103 GSM-THTNFLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1161
Query: 3575 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPF 3754
GIPRLQEIL AS I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP
Sbjct: 1162 GIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPV 1221
Query: 3755 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3934
+V+ ++ SIYKL MKL++P+ YP ++D+TL+D +T+ V FV LE+ I+ ++ +L+KI
Sbjct: 1222 TVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKI 1281
Query: 3935 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQ 4114
SGI N AQ SS ++ + K+ LG+DAQK +RQ
Sbjct: 1282 SGITNFKTDAQPNSSNGAEDDPSNGKTND--DDDDDDDGDADDTEGAEDLGLDAQKSKRQ 1339
Query: 4115 ATDEMDYED 4141
D++DY+D
Sbjct: 1340 VVDDVDYDD 1348
>emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera]
Length = 1350
Score = 1459 bits (3778), Expect = 0.0
Identities = 784/1288 (60%), Positives = 925/1288 (71%), Gaps = 81/1288 (6%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
+++ EG TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G +++
Sbjct: 94 VSFDYEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 153
Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403
T PG+ G I L+ L N F QV+K
Sbjct: 154 NT------------PGN-GRILLIVKKREELQX---VNHAASVHFIA--------QVQKY 189
Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 574
QLELI KGD+VGAK HV + + S +LKQ W
Sbjct: 190 VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 249
Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 751
TSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+GSK
Sbjct: 250 TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 309
Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KGGYL 919
L + A+ S+ E EN ND GD VD+ + SS DG D+ K KG
Sbjct: 310 LERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERKGAQA 369
Query: 920 YPEFLKQKEFFSGPLLPSE----------------------------VKNHMKLLWENET 1015
EF+KQK FFSGPLLPSE V++ M+ LWENE
Sbjct: 370 PIEFIKQKSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEA 429
Query: 1016 QLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKV 1195
+LCS I DI QERL SG K YSMFF+E +LVPPIKFRPPSKG SVMEHPQTVLL KV
Sbjct: 430 ELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKV 489
Query: 1196 MYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKE 1372
+ +NI+L N H N+SERSKI+ RW DLQQSINVLF AG + + +GICQLLEKKE
Sbjct: 490 LQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKE 549
Query: 1373 GIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAII 1552
G+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAII
Sbjct: 550 GVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAII 609
Query: 1553 NGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYR 1732
NG E+HPGATHYVDKL+TVKL N+K+R SISRKL SSRGVVAQPG++ ++E EGK+VYR
Sbjct: 610 NGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYR 669
Query: 1733 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHYANC------------------ 1858
HLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKTLRMHYANC
Sbjct: 670 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDS 729
Query: 1859 STYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSAVLLT 2038
STYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RGLIQDHIVSAVLLT
Sbjct: 730 STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLT 789
Query: 2039 KKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWT 2218
KKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE E++P+LPAI KP P+W+
Sbjct: 790 KKDTFLTREQYNQLLYSSGLSSGSGSFI-GKPGKKVSVLDSEDEMQPLLPAIWKPEPLWS 848
Query: 2219 GKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFG------------------------- 2323
GKQVIT++LNHI TRG +P T EK GKI +EYFG
Sbjct: 849 GKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIE 906
Query: 2324 RKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQM 2503
+K E LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILLSVLSRLFTVFLQM
Sbjct: 907 KKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQM 966
Query: 2504 HGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIR 2683
HGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+ G ID ++LQVE+EK I
Sbjct: 967 HGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIIL 1026
Query: 2684 IKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863
GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCLSLMTT+GAKGS VNF+Q
Sbjct: 1027 SNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQ 1086
Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043
ISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTGL PQEYYFHCMAG
Sbjct: 1087 ISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAG 1146
Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223
REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF YG+DGVDVH+TSF
Sbjct: 1147 REGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSF 1206
Query: 3224 VTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3400
+T+F+ LA NQ V+ E+ G K + YI++LP+ L +KTK F+ ++++ +
Sbjct: 1207 ITEFEALAVNQEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDN 1261
Query: 3401 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3580
++K+KDF AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G +NVTLGI
Sbjct: 1262 MKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGI 1321
Query: 3581 PRLQEILMRASETIQTPVMTCPLLMGKT 3664
PRLQEILM A+ I+TP+MTCPL MG++
Sbjct: 1322 PRLQEILMTAANDIKTPIMTCPLQMGRS 1349
>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
gi|482559195|gb|EOA23386.1| hypothetical protein
CARUB_v10016563mg [Capsella rubella]
Length = 1651
Score = 1455 bits (3767), Expect = 0.0
Identities = 773/1397 (55%), Positives = 977/1397 (69%), Gaps = 32/1397 (2%)
Frame = +2
Query: 47 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 226
A TTEGA++ VE+V FSF+T ++VR SF K+T+PILLDN+ RP P GLYDP MGPL D+
Sbjct: 4 AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63
Query: 227 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 406
CKSCGQ CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF VKKC
Sbjct: 64 EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123
Query: 407 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNY-NSKNLKQHSWTSL 583
QL+LI+KGDIV AK G+ +++ WTSL
Sbjct: 124 SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183
Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN-KYTRANIIKGSKLNK 760
Q++E +++ M EC +C AKNPK+ P FGW + N AN+I+G K+ K
Sbjct: 184 QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243
Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDS-TDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 937
ST EN +DS +D+ ++AE S D ++ K + EF K
Sbjct: 244 ---------STSSVENPDDSG----IDALSEAEDS--------DKEKREKSTEIAKEFEK 282
Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117
QK+ LLPSEV+ +K LWENE + CS I D+ Q K +YSMFF+E++LVP
Sbjct: 283 QKDT-KRDLLPSEVRAILKNLWENEHEYCSFIGDLWQS----GSEKIDYSMFFLESVLVP 337
Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297
PIKFRPP+KGGDSVMEHPQTV LNKV+ SNI+L N N ++SK++ RW +LQ+S+NVL
Sbjct: 338 PIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVL 397
Query: 1298 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477
F + + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+AVNEIGIPP
Sbjct: 398 FDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPP 457
Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657
FAL+L YPERVTPWNV KLR+AIING +VHPGATHY DKL+TVKLP + K RT+I+ KL
Sbjct: 458 CFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKL 517
Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837
SSRG + GK + EGKVVYR ++DGD+VLVNRQPTLHKPS+MAH+VRVL GEKTL
Sbjct: 518 LSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTL 577
Query: 1838 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2017
R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY P++G+P R LIQDHI
Sbjct: 578 RLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHI 637
Query: 2018 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2197
VS+VLLTK+DTFL + +N LL+SSGV+ FS K G+KV++ S+AE+ ++PAIL
Sbjct: 638 VSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAIL 697
Query: 2198 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS--------------- 2332
KPVP+WTGKQVIT++LN I T+G P TVEK+ K+ ++F +S
Sbjct: 698 KPVPLWTGKQVITTVLNLI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKD 755
Query: 2333 ---------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLF 2485
+E LLI+KNE V GVIDKAQF ++G+VHTV E YGS+ AG LLSV SRLF
Sbjct: 756 IDESWKQDLNEDKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLF 815
Query: 2486 TVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EGDIDQMELQV 2662
T FLQ+HGFTCGVDDL+I++++D ER K+LQ +K+GE K G + ID +++
Sbjct: 816 TAFLQIHGFTCGVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRS 875
Query: 2663 EIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAK 2839
IE+ + GESA+ LDR + ++LN +S V ++L GLLK KNC+SLMT SGAK
Sbjct: 876 RIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAK 935
Query: 2840 GSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQE 3019
GS VNF QISS LGQQ LEGKRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQE
Sbjct: 936 GSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQE 995
Query: 3020 YYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDG 3199
YYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKV YD TVRDADGS++QF YGEDG
Sbjct: 996 YYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDG 1055
Query: 3200 VDVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLT 3376
VDVH++SF+ KF L NQ VL+R ED S YI +LP +L++ + F+ +
Sbjct: 1056 VDVHRSSFIGKFKELTVNQDMVLQRCS---EDMLSGSSSYISDLPISLKKDAEKFVEAMP 1112
Query: 3377 KQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLG 3556
+R + ++++ AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G
Sbjct: 1113 MNERIASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRG 1172
Query: 3557 AMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIE 3736
MNVTLGIPRLQEILM A+ I+TP+MTCPLL GKT +DA + L+K++VADI++ +E
Sbjct: 1173 EMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDME 1232
Query: 3737 VSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHL 3916
+SVVP+++ K+ + SI+KLK+ LY+PE YP +DIT ED +TM+V+F+ +LE+ I+ H+
Sbjct: 1233 LSVVPYTIHKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHM 1292
Query: 3917 IMLSKISGIKNIV--LSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGV 4090
ML ++ GI+N V S +G+ D D +G +++ LG
Sbjct: 1293 KMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQTED---------DDDGEGTEVDDLGS 1343
Query: 4091 DAQKRRRQATDEMDYED 4141
DAQKR++QATDEMDYE+
Sbjct: 1344 DAQKRKKQATDEMDYEE 1360
>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1628
Score = 1455 bits (3767), Expect = 0.0
Identities = 783/1386 (56%), Positives = 967/1386 (69%), Gaps = 20/1386 (1%)
Frame = +2
Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223
MA EGAT ++E+V FSFLTNEE+ S K+T+ L +N+G P GLYDPA GPL D
Sbjct: 1 MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60
Query: 224 -RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKK 400
R+ C+SCG C GH GHI+LVSPVYNPL+F L +L RTCF C++FR +R++VK+
Sbjct: 61 NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120
Query: 401 CALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTS 580
A QLELI+KG+I AK ++ SWTS
Sbjct: 121 RASQLELILKGNISKAKSLGEIKLNETIDSVDDDD--------DDSQWSGAEQLGESWTS 172
Query: 581 LQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLN 757
LQ+SEAMS++ E + +C CG +PKIT P FG F+V + + RAN+I +K
Sbjct: 173 LQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAK-- 230
Query: 758 KLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 937
+A D D S G + +K L
Sbjct: 231 ---------------------AADVQADEEDITSGGAGNSNGNNQILSIK--------LV 261
Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117
++ SG LLPS+V+ +KLLW+NE++LCS I DIQ + G K +SMFF+E + VP
Sbjct: 262 EQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIFVP 318
Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297
PIKFRPP K GD+V EHPQTVLL+KV+ SNISL + H S+ I+ RW DLQ S+N+L
Sbjct: 319 PIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLL 378
Query: 1298 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477
F N KT+ + A+GICQLL+KKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP
Sbjct: 379 FDN-KTSLRSQKDASGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 437
Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657
YFALRLTYPERVTPWN KL DAI+NG + HPGA Y DK +T++L ++ +R+S SR+L
Sbjct: 438 YFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRL 497
Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837
SSRGV+ GK EHE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+
Sbjct: 498 QSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTV 557
Query: 1838 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2017
RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHI
Sbjct: 558 RMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHI 617
Query: 2018 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2197
VSA LLTKKDTFL+ +E+N LLYSSGVS FS KPGQKV + NSE+E+ PAI
Sbjct: 618 VSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIF 677
Query: 2198 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF--------------GRKSD 2335
KP P+WTGKQVI++LL +I T+G P TVEK+ KI +F RK D
Sbjct: 678 KPEPLWTGKQVISALLCYI--TKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKD 735
Query: 2336 EA--NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509
E LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG
Sbjct: 736 ELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 795
Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686
FTCGVDDLLI D ER+ +L+ ++IG+ H +FIG E + ID + +Q+ +EK IR
Sbjct: 796 FTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRS 855
Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863
GE+AIT LDR M S LN TS V EL KG LKP KN +SLMTTSGAKGS+VNF Q
Sbjct: 856 NGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQ 915
Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043
ISS LGQQ+LEGKRVPRMVSGKTLPCFP WD + RAGGFI DRFLT LRPQEYYFHCMAG
Sbjct: 916 ISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 975
Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223
REGLVDTAVKTSRSGYLQRCL+K+LE LKVCYDHTVRD+DGS++QF YGEDGVDVH+TSF
Sbjct: 976 REGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSF 1035
Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403
+ KF+ L+ N+ ++ D +S YI +LP+AL+ K ++F+ + + +QR+S +
Sbjct: 1036 INKFEALSINKELIYSNCCRQLD---RSSPYINKLPDALKGKAENFIRDFSSKQRNSSSM 1092
Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583
K DF AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP
Sbjct: 1093 -KEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1151
Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763
RL EI++ AS+ I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP +VK
Sbjct: 1152 RLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVK 1211
Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943
+ ++ SIYKL MKL++P+ YP ++D+TLED +T+ V FV ELE+ I+ H+ +L++ISGI
Sbjct: 1212 EGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISGI 1271
Query: 3944 KNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATD 4123
K+ + S + D D + + +Q G DAQK +++ATD
Sbjct: 1272 KDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEED---GFDAQKSKQRATD 1328
Query: 4124 EMDYED 4141
E+DY+D
Sbjct: 1329 EVDYDD 1334
>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
gi|557103957|gb|ESQ44311.1| hypothetical protein
EUTSA_v10005738mg [Eutrema salsugineum]
Length = 1697
Score = 1439 bits (3725), Expect = 0.0
Identities = 776/1433 (54%), Positives = 972/1433 (67%), Gaps = 68/1433 (4%)
Frame = +2
Query: 47 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 226
A T EGA++ VE+V FSF+T E+VR S K+TNP+LLDN+ RP P GLYDP MGPL+DR
Sbjct: 4 AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63
Query: 227 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 406
T CKSCGQ S CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF N+ V++C
Sbjct: 64 TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123
Query: 407 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQ 586
QL+LI+KG++V AK + + ++ + WTSLQ
Sbjct: 124 SQLKLIMKGNLVAAKQLDSRATDSSE--------ECEDSEMEKERCEDSDMGKQRWTSLQ 175
Query: 587 YSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFH-VNMPNKYTRANIIKGSKLNKL 763
++E L++ + + C C AK PK+ P FGW V M AN+I+G K+ K
Sbjct: 176 FAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKK- 234
Query: 764 SMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQK 943
S EN NDS D + ++ V DG+ +K K + EF K +
Sbjct: 235 --------SASSVENPNDS------DDSGIDALSEVEDGS--EKKKRKSSEVAEEFAKHQ 278
Query: 944 EFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPI 1123
L PSEVK +K LWENE + CS I D+ Q +YSMFF+E +LVPP
Sbjct: 279 NNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQSESE----NVDYSMFFLENILVPPT 334
Query: 1124 KFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFG 1303
KFR P+KGGDSVMEHPQTV LNKV+ SNISL N N ++ KI+ RW +LQ+S+NVLF
Sbjct: 335 KFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKIISRWMNLQESVNVLF- 393
Query: 1304 NSKTAGLR-ENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480
+SKTA ++ + TGICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP++AVN+IGIPP
Sbjct: 394 DSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPC 453
Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660
FAL+LTYPERVTPWNV KLR+AIING ++HPGATHY DK++T+KLPP RK R +I+RKL
Sbjct: 454 FALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKVSTMKLPPTRKARIAIARKLF 513
Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840
SSRGV + GK + EGKVVYRH+QDGD+VLVNRQPTLHKPSIMAH+VRVL GEKTLR
Sbjct: 514 SSRGVTTELGKTCDVNFEGKVVYRHMQDGDVVLVNRQPTLHKPSIMAHMVRVLKGEKTLR 573
Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ---- 2008
+HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY P++G+P R LIQ
Sbjct: 574 LHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYSRPSNGDPLRALIQVVHP 633
Query: 2009 ----------------------------DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSA 2104
DHIVS+VLLTK+DTFL +E+N LL+SSGV+
Sbjct: 634 SYFFKSLYSFHELGCLPVIFMDLACTQQDHIVSSVLLTKRDTFLDKDEFNQLLFSSGVTD 693
Query: 2105 AARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLT 2284
FS + G+KV S AE+ + PAILKPVP+WTGKQVIT++LN I T+G P +
Sbjct: 694 MVLSSFSGRSGKKVIQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEI--TKGHPPFS 751
Query: 2285 VEKSGKIKKEYFGRKSDEAN------------------------------LLIQKNELVH 2374
VEK+ K+ ++F +S E LL++KNE V
Sbjct: 752 VEKATKLPVDFFKCRSKEVKCKSGESNEKNHLTTKQDFDESWKKDLNEDKLLVRKNEFVR 811
Query: 2375 GVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELD 2554
GVIDKAQF +YGLVHTV E YGS+ AG LLSV SRLFTVFLQ+ GFTCGVDDL+I++++D
Sbjct: 812 GVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQLQGFTCGVDDLIILKDMD 871
Query: 2555 MERMKKLQRSDKIGEEQHAKFIG-AKEGDIDQMELQVEIEKAIRIKGESAITQLDRMMSS 2731
ER K+LQ +++GE K G A + ID +++ IE+ + GESA+ LDR + +
Sbjct: 872 GERTKQLQECEQVGERVLRKTFGIAVDVQIDPQDMKSRIERILYEDGESALASLDRSVVN 931
Query: 2732 ELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRV 2908
ELN +S V ++L GLLKP KNC+SLMT SGAKGS VNF QISS LGQQ LEGKRV
Sbjct: 932 ELNQCSSKGVMNDLLSDGLLKPPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRV 991
Query: 2909 PRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG 3088
PRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSG
Sbjct: 992 PRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSG 1051
Query: 3089 YLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQ-RVL 3265
YLQRCL+K+LE LKV YD TVRDADGS++QF YGEDGVDVH++SF+ KF L NQ +L
Sbjct: 1052 YLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFRELTVNQDMIL 1111
Query: 3266 ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXX 3445
+R ED S YI +LP L+ + F+ + +R + L +++D
Sbjct: 1112 QRCS---EDMLSGSSSYITDLPITLKNGAEKFVEAMPMNERIASKLVRQEDLLKLVKSKF 1168
Query: 3446 XXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQ 3625
AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM A+ I+
Sbjct: 1169 FASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIK 1228
Query: 3626 TPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKL 3805
TP+MTCPLL GKT DDAK++ L+K++VADI++S+EVSV+P++V + +V SI+KLK+KL
Sbjct: 1229 TPIMTCPLLKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIHKLKIKL 1288
Query: 3806 YRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIV-LSAQSGSSK 3982
Y+PE YP +DIT ED +TM V+F+ +LE+ I+ H+ ML +I GIK+ SG+
Sbjct: 1289 YKPEHYPKHTDITDEDWKETMTVMFLRKLEDAIEIHVKMLVRIRGIKSEKDTRPTSGNET 1348
Query: 3983 DIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141
D D+ +G ++ LG DAQK+++QA D +DYE+
Sbjct: 1349 DNDDSVSGKHTED------DDDDDEGEGTEVDDLGADAQKQKKQAVDVVDYEE 1395
>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
Length = 1719
Score = 1438 bits (3723), Expect = 0.0
Identities = 781/1429 (54%), Positives = 969/1429 (67%), Gaps = 66/1429 (4%)
Frame = +2
Query: 53 TTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTL 232
+TE TE VEAV F F T+EE R S KITNP L+D LG+P P GLYDPAMG L++R++
Sbjct: 3 STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62
Query: 233 CKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQ 412
C+SCGQR++ C GHCGHI+LVS YNPLLF L N+L +TC +C F + E+ + Q
Sbjct: 63 CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122
Query: 413 LELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNS-------------- 550
LELI KGD+ GAK R+ +
Sbjct: 123 LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182
Query: 551 KNLKQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN--KYT 724
K+ +Q SW+S Q +EA+S+++E + + +C C + PKI+ P FGWF V K
Sbjct: 183 KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242
Query: 725 RANIIKGSKLNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS---- 892
R N+I+ KL++ + N + E NA D S D ++ ++ S + T S
Sbjct: 243 RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302
Query: 893 ---AQKVKGGYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSI 1063
A+K+ G P F + SGPLLPS+V++ +KLLWE E CS I DIQ+++
Sbjct: 303 VNRAKKLNPGSGDPNF-----YLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKP 357
Query: 1064 SGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSE 1243
G K YSMFF+E +LVPPI+FRPP+KGGDSVMEHPQTVLL KV+ SNI+L N H+N+ E
Sbjct: 358 FGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNA-E 416
Query: 1244 RSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYAC 1420
+SKI+ RW +LQQSINV F + L +++ GICQ LEKKEGIFRQKMMGKRVN+AC
Sbjct: 417 KSKIISRWMELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFAC 476
Query: 1421 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKL 1600
RSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWN KLR A++NG ++HPGAT YVD +
Sbjct: 477 RSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSV 536
Query: 1601 ATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTL 1780
VKLPP++K+R +ISRKL SSRGVV Q GK + E EGK V+RHLQDGDIVLVNRQPTL
Sbjct: 537 TIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTL 596
Query: 1781 HKPSIMAHVVRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANN 1960
HKPSIMAHVVRVL GE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEA+NIVNAN
Sbjct: 597 HKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 656
Query: 1961 QYILPTSGEPTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQ 2140
QYI+PT G+ RGLIQDHIV AVLLT K+TF+ E+N LLY SGV A+ +
Sbjct: 657 QYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSR 716
Query: 2141 KVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF 2320
KV++I++E +E +LPAI KP P+WTGKQVIT+LLNHI TRG P TVE GKI K YF
Sbjct: 717 KVTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHI--TRGCAPFTVENQGKIPKNYF 774
Query: 2321 -------GRKSD----EANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLS 2467
G + + E NLL+ KNELV GVIDKAQFG++GLVHTVQE YG+ +AGI LS
Sbjct: 775 FGNSYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLS 834
Query: 2468 VLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQ 2647
LSR+FT+FLQ+HGFTCGVDDL+I+ + D +R +KL+ D +GE H F+ K G I
Sbjct: 835 ALSRVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGED-VGEVVHCDFVKFKPGQIGP 893
Query: 2648 MELQVEIEKAIRIKGESAITQLDRMMSSELND-LT---SVVNSELFPKGLLKPFPKNCLS 2815
ELQ+EIEK I ESA LD M ++LN LT S + L GLLKPFPKNC+S
Sbjct: 894 DELQLEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCIS 953
Query: 2816 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2995
+MTT+GAKGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP FPPWD SRAGGFITDRF
Sbjct: 954 VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRF 1013
Query: 2996 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3175
LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVK+LE LKVCYD+TVRDADGS+V
Sbjct: 1014 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIV 1073
Query: 3176 QFCYGEDGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTK 3355
QF YGEDG+DVH+TSF+ F L N+ + + H + + + YIK+LPE LE++ K
Sbjct: 1074 QFYYGEDGIDVHRTSFLNNFKALQDNRETICQKFQH----KREFNSYIKKLPEGLEEEAK 1129
Query: 3356 DFL-----SNLTKQQR------HSLHLRKRKD----------------FXXXXXXXXXXX 3454
F+ +L KQ HS ++K+ F
Sbjct: 1130 RFIQETQNKSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSS 1189
Query: 3455 XAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPV 3634
AQ GEPVGVIAAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM ASE I+TP+
Sbjct: 1190 LAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPL 1249
Query: 3635 MTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRP 3814
+TCP ++ + L + +KKVSVAD++E++EV + SV + +YKLKM L
Sbjct: 1250 LTCPFSQWRSKREVVSLVSHVKKVSVADLIENMEVQL---SVNHKTAARVYKLKMTLKDT 1306
Query: 3815 ELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDE 3994
E ++LE+ +T++ F+GELE+ I+ H++ LS++SGIKN + + SS + DE
Sbjct: 1307 EF------VSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADE 1360
Query: 3995 GDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141
++G ++ LG D QKR++QATD+MDYED
Sbjct: 1361 DESGLGTENA---GVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYED 1406