BLASTX nr result
ID: Akebia23_contig00003513
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00003513 (4148 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 1749 0.0 emb|CBI29879.3| unnamed protein product [Vitis vinifera] 1731 0.0 ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 1601 0.0 ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 1594 0.0 ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub... 1581 0.0 ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 1575 0.0 ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr... 1571 0.0 ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 1563 0.0 ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 1556 0.0 ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub... 1551 0.0 ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas... 1519 0.0 ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 1500 0.0 ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub... 1494 0.0 ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 1492 0.0 ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub... 1490 0.0 emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] 1459 0.0 ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps... 1455 0.0 ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me... 1455 0.0 ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr... 1439 0.0 gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 1438 0.0 >ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis vinifera] Length = 1740 Score = 1749 bits (4529), Expect = 0.0 Identities = 902/1405 (64%), Positives = 1071/1405 (76%), Gaps = 35/1405 (2%) Frame = +2 Query: 35 VTKMAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGP 214 VT T G TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G Sbjct: 47 VTAPVTATSGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGS 106 Query: 215 LEDRTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQV 394 +++ T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ + V Sbjct: 107 IDENTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLV 166 Query: 395 KKCALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQ 565 +K QLELI KGD+VGAK HV + + S +LKQ Sbjct: 167 QKYVSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQ 226 Query: 566 HSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIK 742 WTSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+ Sbjct: 227 QEWTSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIR 286 Query: 743 GSKLNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KG 910 GSKL + A+ S+ E EN ND GD VD+ + SS DG D+ K KG Sbjct: 287 GSKLERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKRLERKG 346 Query: 911 GYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSM 1090 EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL SG K YSM Sbjct: 347 AQAPIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSM 406 Query: 1091 FFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWF 1270 FF+E +LVPPIKFRPPSKG SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW Sbjct: 407 FFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWM 466 Query: 1271 DLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPY 1447 DLQQSINVLF AG + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY Sbjct: 467 DLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPY 526 Query: 1448 LAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNR 1627 LAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL N+ Sbjct: 527 LAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNK 586 Query: 1628 KIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHV 1807 K+R SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHV Sbjct: 587 KMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHV 646 Query: 1808 VRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGE 1987 VRVL GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+ Sbjct: 647 VRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGD 706 Query: 1988 PTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEA 2167 P RGLIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE Sbjct: 707 PIRGLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSED 765 Query: 2168 EIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN- 2344 E++P+LPAI KP P+W+GKQVIT++LNHI TRG +P T EK GKI +EYFG + DE Sbjct: 766 EMQPLLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKS 823 Query: 2345 ------------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTA 2452 LLI KNELV GVIDKAQF +YGLVH VQE YGS+TA Sbjct: 824 GKGKDPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTA 883 Query: 2453 GILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKE 2632 GILLSVLSRLFTVFLQMHGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+ Sbjct: 884 GILLSVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNH 943 Query: 2633 GDIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCL 2812 G ID ++LQVE+EK I GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCL Sbjct: 944 GKIDPVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCL 1003 Query: 2813 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2992 SLMTT+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DR Sbjct: 1004 SLMTTTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDR 1063 Query: 2993 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3172 FLTGL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+ Sbjct: 1064 FLTGLHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSI 1123 Query: 3173 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3349 VQF YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G K + YI++LP+ L +K Sbjct: 1124 VQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKK 1178 Query: 3350 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3529 TK F+ ++++ +++K+KDF AQPGEPVGV+AAQSVG+PSTQMTL Sbjct: 1179 TKKFIEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTL 1238 Query: 3530 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3709 NTFH AG G +NVTLGIPRLQEILM A+ I+TP+MTCPL MG++ DDA+RLAA LKKV+ Sbjct: 1239 NTFHLAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVT 1298 Query: 3710 VADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3889 VADI ES+EVS+VPF+V+ HQ SIYKLKMKLY P LYPP + I+LEDC +T+E +FV E Sbjct: 1299 VADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRE 1358 Query: 3890 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXX 4069 LE+ IQ HL++LSKISGIKN + ++S +SK+ DE +G + Sbjct: 1359 LEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDG 1415 Query: 4070 XXXXLGVDAQKRRRQATDEMDYEDA 4144 LG+DAQKR++QA+DEMDY D+ Sbjct: 1416 GAEDLGLDAQKRKQQASDEMDYGDS 1440 >emb|CBI29879.3| unnamed protein product [Vitis vinifera] Length = 1669 Score = 1731 bits (4482), Expect = 0.0 Identities = 893/1401 (63%), Positives = 1062/1401 (75%), Gaps = 34/1401 (2%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA+ EG TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G +++ Sbjct: 1 MAHVIEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 T C+SCGQRSF CPGHCGHIDLVS VYNPLLF +L NLLQ+TCFFC+HF+ + V+K Sbjct: 61 NTPCQSCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKY 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 574 QLELI KGD+VGAK HV + + S +LKQ W Sbjct: 121 VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 180 Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 751 TSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+GSK Sbjct: 181 TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 240 Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV---KGGYLY 922 L + + VD+ + SS DG D+ K KG Sbjct: 241 LER---------------------PLNGVDTDETHSSIAPTDGIQDTVTKRLERKGAQAP 279 Query: 923 PEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102 EF+KQK FFSGPLLPSEV++ M+ LWENE +LCS I DI QERL SG K YSMFF+E Sbjct: 280 IEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLE 339 Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQ 1282 +LVPPIKFRPPSKG SVMEHPQTVLL KV+ +NI+L N H N+SERSKI+ RW DLQQ Sbjct: 340 TILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQ 399 Query: 1283 SINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459 SINVLF AG + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVN Sbjct: 400 SINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVN 459 Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639 EIGIPPYFALRLTYPE+VTPWNV KLRDAIING E+HPGATHYVDKL+TVKL N+K+R Sbjct: 460 EIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRI 519 Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819 SISRKL SSRGVVAQPG++ ++E EGK+VYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL Sbjct: 520 SISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 579 Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999 GEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RG Sbjct: 580 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRG 639 Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179 LIQDHIVSAVLLTKKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE E++P Sbjct: 640 LIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLSSGSGSFIG-KPGKKVSVLDSEDEMQP 698 Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKSDEAN----- 2344 +LPAI KP P+W+GKQVIT++LNHI TRG +P T EK GKI +EYFG + DE Sbjct: 699 LLPAIWKPEPLWSGKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGK 756 Query: 2345 --------------------LLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILL 2464 LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILL Sbjct: 757 DPGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILL 816 Query: 2465 SVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDID 2644 SVLSRLFTVFLQMHGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+ G ID Sbjct: 817 SVLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKID 876 Query: 2645 QMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMT 2824 ++LQVE+EK I GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCLSLMT Sbjct: 877 PVKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMT 936 Query: 2825 TSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTG 3004 T+GAKGS VNF+QISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTG Sbjct: 937 TTGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTG 996 Query: 3005 LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFC 3184 L PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF Sbjct: 997 LHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFN 1056 Query: 3185 YGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDF 3361 YG+DGVDVH+TSF+T+F+ LA N+ V+ E+ G K + YI++LP+ L +KTK F Sbjct: 1057 YGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKF 1111 Query: 3362 LSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFH 3541 + ++++ +++K+KDF AQPGEPVGV+AAQSVG+PSTQMTLNTFH Sbjct: 1112 IEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFH 1171 Query: 3542 HAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADI 3721 AG G +NVTLGIPRLQEILM A+ I+TP+MTCPL MG++ DDA+RLAA LKKV+VADI Sbjct: 1172 LAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADI 1231 Query: 3722 VESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEE 3901 ES+EVS+VPF+V+ HQ SIYKLKMKLY P LYPP + I+LEDC +T+E +FV ELE+ Sbjct: 1232 TESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDA 1291 Query: 3902 IQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXX 4081 IQ HL++LSKISGIKN + ++S +SK+ DE +G + Sbjct: 1292 IQNHLLLLSKISGIKNFLPDSRSMASKETDEDASG---DGLAGGNGDEDDDGEDDGGAED 1348 Query: 4082 LGVDAQKRRRQATDEMDYEDA 4144 LG+DAQKR++QA+DEMDY D+ Sbjct: 1349 LGLDAQKRKQQASDEMDYGDS 1369 >ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao] Length = 1689 Score = 1601 bits (4146), Expect = 0.0 Identities = 847/1403 (60%), Positives = 1023/1403 (72%), Gaps = 37/1403 (2%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA TEGAT+SVEAV F+F+T EEVR SF K+TN LLD + RP P GLYD +GPLED Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 RT CKSCG CPGHCGHIDLVSP+YNPLLF L LLQR CFFCYHFR + +V++C Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 QL+LI GDIVGAK G +NS+ +K WTSL Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760 Q EAMS+L+ + + +CK C AKNP IT P FGW H+N M R N+I+G K+ Sbjct: 177 QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 934 +A +G E+ + SS+ VD + ++S + + G+ + K K + EF+ Sbjct: 237 TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293 Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114 KQK FSGPLLPSEVK KLLWENE +LCS+I DIQQ+ G K YSMFF+E +LV Sbjct: 294 KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350 Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1291 PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N Sbjct: 351 PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410 Query: 1292 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471 +LF + ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI Sbjct: 411 LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470 Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651 PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR Sbjct: 471 PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530 Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831 KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK Sbjct: 531 KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590 Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011 T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD Sbjct: 591 TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650 Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191 HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V SE + PI+PA Sbjct: 651 HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710 Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2320 ILKP P+WTGKQVI+S+L+HI TRG P TV K+ KI +++F Sbjct: 711 ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768 Query: 2321 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2458 G+K+ DE +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI Sbjct: 769 KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828 Query: 2459 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD 2638 LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+ +K E H + G K Sbjct: 829 LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVN- 887 Query: 2639 IDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLS 2815 + ELQ+EIE+ IR GE+A+T LDR M S LN+ +S V +EL +GL+K +NC+S Sbjct: 888 -SETELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCIS 946 Query: 2816 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2995 LMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DRF Sbjct: 947 LMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRF 1006 Query: 2996 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3175 L+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+V Sbjct: 1007 LSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIV 1066 Query: 3176 QFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKT 3352 QF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L + DD K LP+ L K Sbjct: 1067 QFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSKA 1122 Query: 3353 KDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLN 3532 + F+ K+ +H K KDF AQPGEPVGV+AAQSVG+PSTQMTLN Sbjct: 1123 EQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLN 1180 Query: 3533 TFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSV 3712 TFH AG G MNVTLGIPRLQEILM AS I+TPVMTCPL GKT +DA LA +KK++V Sbjct: 1181 TFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKITV 1240 Query: 3713 ADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGEL 3892 ADI+ES+EVSV PF+V + SIYKLKM L +P+ Y SDIT++DC ++V+F+ EL Sbjct: 1241 ADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLREL 1300 Query: 3893 EEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXX 4072 E+ IQ HL++LSKISGIK + +Q +S ++DE + +S++ Sbjct: 1301 EDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRETKNDDDDDDDDADDEER 1360 Query: 4073 XXXLGVDAQKRRRQATDEMDYED 4141 LG+DAQK+++Q TDEMDYED Sbjct: 1361 AEDLGLDAQKQKQQTTDEMDYED 1383 >ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus communis] Length = 1686 Score = 1594 bits (4127), Expect = 0.0 Identities = 854/1394 (61%), Positives = 1006/1394 (72%), Gaps = 32/1394 (2%) Frame = +2 Query: 56 TEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLC 235 ++GATES++++ FSFLT+EEVR SF KITNP LLD + RP P GLYDPA+GPL +RT+C Sbjct: 8 SKGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTIC 67 Query: 236 KSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQL 415 K+CGQRS CPGHCGHIDLVSPVYNPLLF L LLQRTCF C+HFR+ R QV+KC QL Sbjct: 68 KTCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQL 127 Query: 416 ELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK--GLPRQVPNYNSKNLKQHSWTSLQY 589 ELI+KGDIVGAK H + V + ++ +Q WTSLQ+ Sbjct: 128 ELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQF 187 Query: 590 SEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLS 766 +EAMS+L+ + + +CK C + NP IT P FGWFH + M + RAN+I G +L L Sbjct: 188 TEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLL 247 Query: 767 MGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKE 946 S G D DA G + GT +K + L EF +QK Sbjct: 248 ----------------GSEIEGTTDVEDAAEPGDQHSGTKKHKKKERKEVL--EFTRQKS 289 Query: 947 FFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIK 1126 FS LLPSEVK ++LLW+NE ++CS I D+QQ+ K +MFF+E +LVPPIK Sbjct: 290 TFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEFG--KRKAGPAMFFLETILVPPIK 347 Query: 1127 FRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGN 1306 FRPP+KGGDSVMEHPQTVLL+KV+ SNISL + H+N E SKIV RW DLQQSIN LF + Sbjct: 348 FRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSINTLF-D 405 Query: 1307 SKTA---GLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477 SKTA G RE A GICQLLEKKEG+FRQKMMGKRVNYACRSVISPDPY+ VNEIGIPP Sbjct: 406 SKTAKGPGQREG-APGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIGIPP 464 Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657 FA++LTYPERVTPWN+ KLR+A+ING+E HPGATHYVDKL+ KLPP RK R SISRKL Sbjct: 465 CFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISISRKL 524 Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837 SSRG V Q GK E E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTL Sbjct: 525 PSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTL 584 Query: 1838 RMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014 RMHYANCS TYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQ++ P++GEP RGLIQDH Sbjct: 585 RMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLIQDH 644 Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194 IVSAVLLTKKDTFL+ +E+N LLYSSGVS + F +PGQKV SE EI+ + PAI Sbjct: 645 IVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLPPAI 704 Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------------ 2320 KP P+WTGKQVIT++LNHI T P TVEK KI +F Sbjct: 705 WKPKPLWTGKQVITAILNHI--TSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDKD 762 Query: 2321 ---GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTV 2491 ++ DE +L+ KNELV GVIDK QFGEYGLVHTV E GS TAGILLSVLSRLFT Sbjct: 763 APAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFTA 822 Query: 2492 FLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEG--DIDQMELQVE 2665 +LQMHGFTCGVDDLLI+ D ER K+L+ +K GE H FIG K+ ID + +Q+ Sbjct: 823 YLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQLN 882 Query: 2666 IEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKG 2842 IEK IR G+SA+ LDR MS+ELN TS V S L GLLKP KNC+SLMTTSGAKG Sbjct: 883 IEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAKG 942 Query: 2843 SLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEY 3022 S VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+R+GG+ITDRFLTGLRPQEY Sbjct: 943 SKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQEY 1002 Query: 3023 YFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGV 3202 YFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGSVVQF YGEDGV Sbjct: 1003 YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDGV 1062 Query: 3203 DVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTK 3379 DVH+TSF+ KF LA NQ + +R G + YI ELPEAL++K FL + + Sbjct: 1063 DVHQTSFIAKFKELALNQDMIYKRSGGQLG----AFNSYISELPEALKEKADRFLDDFSI 1118 Query: 3380 QQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGA 3559 R + +L KR+D AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G Sbjct: 1119 MGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGE 1178 Query: 3560 MNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEV 3739 MNVTLGIPRLQEILM AS I+TP+MTCPL G+T +DA LA L+KV+VADIVES+EV Sbjct: 1179 MNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEV 1238 Query: 3740 SVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLI 3919 SVVPF+++ V IYKLKMKLYRP YP +++I++ED +T+EV+F+ ELE+ IQ H+ Sbjct: 1239 SVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMF 1298 Query: 3920 MLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQ 4099 +LS+ISGIK+ + ++S +S + DE G S + LG+DAQ Sbjct: 1299 LLSRISGIKDFLPESRSRASGEADEDVAGDMSHR---EERDDDNDDDDGERADDLGLDAQ 1355 Query: 4100 KRRRQATDEMDYED 4141 KR+ QATDEMDY+D Sbjct: 1356 KRKLQATDEMDYDD 1369 >ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus sinensis] Length = 1715 Score = 1581 bits (4094), Expect = 0.0 Identities = 837/1430 (58%), Positives = 1026/1430 (71%), Gaps = 64/1430 (4%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 M TTE TESV+AV FSFLT+EEVR SF K+ P+LLD +GRP P GLYDP +GPL++ Sbjct: 1 MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLKEPLLLDRVGRPLPGGLYDPILGPLDE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 + CK+CGQR F CPGH GHIDLV PVYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC Sbjct: 61 TSSCKTCGQRQFLCPGHFGHIDLVVPVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 574 +LELIIKGDI+ AK + P NY N +NLK W Sbjct: 121 VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180 Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 751 TSLQ++EA L + + + T+C C AKNP+I+ P FGW H+N MP+ RAN+I+G Sbjct: 181 TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240 Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 925 L + G GEEE D A DVD+ + S + GT D+A + KG P Sbjct: 241 LGETFSG-------GEEEK--DLGASSDVDAPETHSFNGTFPGTQDTAARRHQKGSGAVP 291 Query: 926 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102 F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+ G K +S+FF+ Sbjct: 292 SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348 Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKI-VPRWFDLQ 1279 A+LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N + +KI V RW +LQ Sbjct: 349 AVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKIIVTRWMNLQ 408 Query: 1280 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459 QS+NVLF AG R+ MA+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN Sbjct: 409 QSVNVLFDGKNAAGQRD-MASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467 Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639 EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R Sbjct: 468 EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527 Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819 SI+RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL Sbjct: 528 SIARKLDTSRGAIVQPGKDSDNEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587 Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999 GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R Sbjct: 588 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647 Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179 LIQDHIVSA LLTKKDTFL +E+ LLYSSGVS++ F+ KPGQ+V + SE E+ P Sbjct: 648 LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707 Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------------- 2320 +LPAI KP P+WTGKQVIT++LNHI TRG P VE+ GK+ +++F Sbjct: 708 LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFVVERGGKLPQDFFKTRFNADKQSDRK 765 Query: 2321 ------------------GRKSD-----------------------EANLLIQKNELVHG 2377 G+K + E LLI KN+LV G Sbjct: 766 KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825 Query: 2378 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2557 VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + Sbjct: 826 VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885 Query: 2558 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2734 ER L S++IG+ H + + ++G +ID ++L+ EIEKA+R G++A+ D M+S+ Sbjct: 886 ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945 Query: 2735 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2911 LN T S V +EL +GLLKP KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP Sbjct: 946 LNKHTSSSVINELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005 Query: 2912 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3091 RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065 Query: 3092 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3271 LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ + Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125 Query: 3272 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3451 DA S+ YI ELP+AL+ + F + ++DF Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176 Query: 3452 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3631 AQPGEPVG++A+QSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL AS+ I+TP Sbjct: 1177 SLAQPGEPVGLLASQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236 Query: 3632 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYR 3811 V+TCPLL+GKT DDAKRLA LKK++VADIV+ I V V F+ Q S+Y L M+LY+ Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACSVYVLTMELYK 1296 Query: 3812 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 3991 P+ YP ++DITLED + +EV+FV ELE+ IQ HL++LSKI+GIKN+ +S + D Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356 Query: 3992 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141 + +G+ SQ LG+DA K++++ATDE DYED Sbjct: 1357 QDGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYED 1403 >ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao] gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao] Length = 1665 Score = 1575 bits (4079), Expect = 0.0 Identities = 832/1364 (60%), Positives = 1004/1364 (73%), Gaps = 38/1364 (2%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA TEGAT+SVEAV F+F+T EEVR SF K+TN LLD + RP P GLYD +GPLED Sbjct: 1 MAQITEGATDSVEAVRFNFMTTEEVRKHSFLKVTNANLLDLMDRPMPGGLYDAVLGPLED 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 RT CKSCG CPGHCGHIDLVSP+YNPLLF L LLQR CFFCYHFR + +V++C Sbjct: 61 RTPCKSCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLLQRICFFCYHFRAEKTEVERC 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 QL+LI GDIVGAK G +NS+ +K WTSL Sbjct: 121 VSQLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESG----SIVHNSEAVKPKEWTSL 176 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760 Q EAMS+L+ + + +CK C AKNP IT P FGW H+N M R N+I+G K+ Sbjct: 177 QLMEAMSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVD 236 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKV--KGGYLYPEFL 934 +A +G E+ + SS+ VD + ++S + + G+ + K K + EF+ Sbjct: 237 TFSDEA---GSGLEDADDVSSSGNGVDIAEMDTSEIGFTGSEGNGAKARKKKAQVPLEFM 293 Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114 KQK FSGPLLPSEVK KLLWENE +LCS+I DIQQ+ G K YSMFF+E +LV Sbjct: 294 KQKNLFSGPLLPSEVKKITKLLWENEVELCSIISDIQQQGF---GKKVGYSMFFLETILV 350 Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPR-WFDLQQSIN 1291 PPIKFR P+KGGDSVMEHPQTVLL+KV+ +NISL N + N+ + SK V R W DLQQS+N Sbjct: 351 PPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVRLWMDLQQSVN 410 Query: 1292 VLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471 +LF + ++++GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGI Sbjct: 411 LLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGI 470 Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651 PPYFALRLTYPERVTPWNV KLR+AIING+E HPGATHYVDKL+T +LPP++K R SISR Sbjct: 471 PPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLPPSQKARISISR 530 Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831 KL SSRG +AQPGKNL++E EGK+V RHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEK Sbjct: 531 KLPSSRGAIAQPGKNLDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 590 Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011 T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ P++GEP R LIQD Sbjct: 591 TIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPIRALIQD 650 Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191 HIVSAVLLTK+DTFL+ +E+N LLYSSGVS+ A++ FS KPGQKV V SE + PI+PA Sbjct: 651 HIVSAVLLTKRDTFLSRDEFNQLLYSSGVSSLAQNSFSGKPGQKVFVSTSEEGMLPIIPA 710 Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------------- 2320 ILKP P+WTGKQVI+S+L+HI TRG P TV K+ KI +++F Sbjct: 711 ILKPKPLWTGKQVISSVLSHI--TRGRPPFTVGKTAKIPRDFFRNRRNKNKQSSREENQP 768 Query: 2321 ---GRKS-----------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGI 2458 G+K+ DE +LI +N+LV GVIDKAQF +YGLVHTVQE YGS+TAGI Sbjct: 769 KNDGQKAKVAEKNSKKEPDEEKILIYRNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGI 828 Query: 2459 LLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EG 2635 LLSV SRLFTVFLQMHGFTCGVDDLLI+++ D+ER K+L+ +K E H + G K Sbjct: 829 LLSVFSRLFTVFLQMHGFTCGVDDLLIMEDKDIERKKQLEDCEKKVTEAHYELFGVKVNS 888 Query: 2636 DIDQMELQVEIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCL 2812 + ELQ+EIE+ IR GE+A+T LDR M S LN+ +S V +EL +GL+K +NC+ Sbjct: 889 ETAPTELQLEIERTIRRDGETALTALDRKMISVLNENSSKGVLTELLSEGLVKSMGENCI 948 Query: 2813 SLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDR 2992 SLMTTSGAKGS VNF QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD A+RAGGFI+DR Sbjct: 949 SLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDR 1008 Query: 2993 FLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSV 3172 FL+GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LECLK+ YDHTVRDADGS+ Sbjct: 1009 FLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSI 1068 Query: 3173 VQFCYGEDGVDVHKTSFVTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQK 3349 VQF YGEDG+DVH+TSF+ KF+ LA NQ ++ E+L + DD K LP+ L K Sbjct: 1069 VQFIYGEDGIDVHQTSFIAKFEALALNQDMMSEKLCSQLGE----PDDSDKILPDGLRSK 1124 Query: 3350 TKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTL 3529 + F+ K+ +H K KDF AQPGEPVGV+AAQSVG+PSTQMTL Sbjct: 1125 AEQFIREEIKKYQH--QKIKPKDFLNLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTL 1182 Query: 3530 NTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVS 3709 NTFH AG G MNVTLGIPRLQEILM AS I+TPVMTCPL GKT +DA LA +KK++ Sbjct: 1183 NTFHLAGRGEMNVTLGIPRLQEILMTASIDIRTPVMTCPLHKGKTKEDALCLANKMKKIT 1242 Query: 3710 VADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGE 3889 VADI+ES+EVSV PF+V + SIYKLKM L +P+ Y SDIT++DC ++V+F+ E Sbjct: 1243 VADILESMEVSVAPFAVDNGDICSIYKLKMMLGKPDKYFENSDITVKDCEHILKVVFLRE 1302 Query: 3890 LEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQ 4021 LE+ IQ HL++LSKISGIK + +Q +S ++DE + +S++ Sbjct: 1303 LEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDEDVSEGRSRE 1346 >ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] gi|557523327|gb|ESR34694.1| hypothetical protein CICLE_v10004132mg [Citrus clementina] Length = 1715 Score = 1571 bits (4068), Expect = 0.0 Identities = 833/1430 (58%), Positives = 1022/1430 (71%), Gaps = 64/1430 (4%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 M TTE TESV+AV FSFLT+EEVR SF K+T P+LLD + RP P GLYDP +GPL++ Sbjct: 1 MNQTTEVTTESVKAVWFSFLTDEEVRKQSFLKLTEPLLLDRVSRPLPGGLYDPILGPLDE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 + CK+CGQR F CPGH GHIDLV VYNPLLF +L+ LL+R CFFC+HF+ +R +V+KC Sbjct: 61 TSSCKTCGQRQFLCPGHFGHIDLVVSVYNPLLFNLLYTLLKRICFFCHHFKASRREVEKC 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVP--NY-NSKNLKQHSW 574 +LELIIKGDI+ AK + P NY N +NLK W Sbjct: 121 VRKLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEW 180 Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSK 751 TSLQ++EA L + + + T+C C AKNP+I+ P FGW H+N MP+ RAN+I+G Sbjct: 181 TSLQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCN 240 Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQK--VKGGYLYP 925 L + G GEEE D DVD+ + S + GT D+A + KG P Sbjct: 241 LGETFSG-------GEEEK--DLGTSSDVDAPETHSFNGAFPGTQDTAARRHQKGSGAVP 291 Query: 926 E-FLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIE 1102 F KQK+ FSGPLLPS+VK+ ++ LWENE +LCS I D+QQ+ G K +S+FF+ Sbjct: 292 SGFKKQKDLFSGPLLPSDVKDIIEKLWENEFELCSFISDMQQQGF---GKKAGHSIFFLG 348 Query: 1103 ALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSK-IVPRWFDLQ 1279 +LVPPIKFR PSKGGDSVMEHPQTVLL+KV+ +NI L N ++N + +K IV RW +LQ Sbjct: 349 VVLVPPIKFRLPSKGGDSVMEHPQTVLLSKVLQANIYLANAYVNQPDNAKVIVARWMNLQ 408 Query: 1280 QSINVLFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVN 1459 QS+NVLF AG R+ +A+GICQLLEKKEG+FRQK+MGKRVNYACRSVISPDPYLAVN Sbjct: 409 QSVNVLFDGKNAAGQRD-VASGICQLLEKKEGLFRQKLMGKRVNYACRSVISPDPYLAVN 467 Query: 1460 EIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRT 1639 EIGIPPYFALRLTYPERVTPWNV KLRD+IINGAE+HPGATHY+DKL+T++LPPN+K+R Sbjct: 468 EIGIPPYFALRLTYPERVTPWNVVKLRDSIINGAEIHPGATHYLDKLSTMRLPPNKKMRI 527 Query: 1640 SISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVL 1819 SI RKL +SRG + QPGK+ ++E EGK+VYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL Sbjct: 528 SIGRKLDTSRGAIVQPGKDSDNEFEGKMVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 587 Query: 1820 SGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRG 1999 GEKTLRMHYANCSTYNADFDGDEMNVHFPQDE+SRAEA+NIVNANNQY+ P++G+P R Sbjct: 588 KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQYVRPSNGDPLRS 647 Query: 2000 LIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEP 2179 LIQDHIVSA LLTKKDTFL +E+ LLYSSGVS++ F+ KPGQ+V + SE E+ P Sbjct: 648 LIQDHIVSAALLTKKDTFLNRDEFCQLLYSSGVSSSGLGSFTGKPGQRVLISRSEQEVLP 707 Query: 2180 ILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF----------GRK 2329 +LPAI KP P+WTGKQVIT++LNHI TRG P VE+ GK+ +++F GRK Sbjct: 708 LLPAIWKPEPLWTGKQVITAVLNHI--TRGRPPFIVERGGKLPQDFFKTRFNADKQSGRK 765 Query: 2330 SD--------------------------------------------EANLLIQKNELVHG 2377 + E LLI KN+LV G Sbjct: 766 KNDKGKLSKTNKMHKDKSGKKKEVVEGKPGEEKEAEKNKSKEKELSEEKLLIYKNDLVRG 825 Query: 2378 VIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELDM 2557 VIDKAQF +YGLVHTVQE YGS+TAG LLS LSRLFTVFLQMHGFTCGVDDLLI+++ + Sbjct: 826 VIDKAQFADYGLVHTVQELYGSNTAGTLLSALSRLFTVFLQMHGFTCGVDDLLILKDKER 885 Query: 2558 ERMKKLQRSDKIGEEQHAKFIGAKEG-DIDQMELQVEIEKAIRIKGESAITQLDRMMSSE 2734 ER L S++IG+ H + + ++G +ID ++L+ EIEKA+R G++A+ D M+S+ Sbjct: 886 ERKNHLHGSEEIGKRVHLEALELEDGAEIDPIKLKSEIEKAMRGGGDAAVAYFDMKMTSQ 945 Query: 2735 LNDLT-SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRVP 2911 LN T S V ++L +GLLKP KN +SLMTTSGAKGS VNF QISS LGQQ+LEGKRVP Sbjct: 946 LNKHTSSSVINDLLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVP 1005 Query: 2912 RMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 3091 RMVSGKTLP F PWD A RAGGFI DRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY Sbjct: 1006 RMVSGKTLPSFHPWDWAPRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGY 1065 Query: 3092 LQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQRVLER 3271 LQRCL+K+LECLK+ YD++VRDADGS+VQFCYGEDGVDVH+TSF++KFD LAANQ ++ + Sbjct: 1066 LQRCLIKNLECLKISYDYSVRDADGSIVQFCYGEDGVDVHQTSFISKFDALAANQEMIYK 1125 Query: 3272 LGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXXXX 3451 DA S+ YI ELP+AL+ + F + ++DF Sbjct: 1126 KCSGQLDA---SNAYIMELPDALKDNAEKFADKFLSNE------MAKQDFLKLVKHKFVL 1176 Query: 3452 XXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTP 3631 AQPGEPVG++AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEIL AS+ I+TP Sbjct: 1177 SLAQPGEPVGLLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILTIASKDIKTP 1236 Query: 3632 VMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYR 3811 V+TCPLL+GKT DDAKRLA LKK++VADIV+ I V V F+ Q ++Y L M+LY+ Sbjct: 1237 VITCPLLVGKTEDDAKRLADKLKKITVADIVKKISVKVRAFTSHDGQACTVYVLTMELYK 1296 Query: 3812 PELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDID 3991 P+ YP ++DITLED + +EV+FV ELE+ IQ HL++LSKI+GIKN+ +S + D Sbjct: 1297 PKNYPTYTDITLEDWEEILEVVFVRELEDTIQNHLLLLSKINGIKNVASGLTQKASNETD 1356 Query: 3992 EGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141 + +G+ SQ LG+DA K++++ATDE DYED Sbjct: 1357 QEGSGNVSQ---CRGDDDDADDADGEEAEDLGMDAHKQKQRATDEKDYED 1403 >ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1650 Score = 1563 bits (4046), Expect = 0.0 Identities = 842/1396 (60%), Positives = 1001/1396 (71%), Gaps = 30/1396 (2%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA TTEGA+ESV+ V FSF+TNEEVR S K+T PILLD +GRP GLYDPAMG L++ Sbjct: 1 MAQTTEGASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 TLCKSCGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR V+ C Sbjct: 61 TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENC 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 LELI+ G+I AK ++ Y KN + +WTSL Sbjct: 121 KTLLELILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSL 171 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760 Q+SEA+S++ + + +++ CK CGAK+PKIT P FGWFH+ + RAN I+ SK Sbjct: 172 QFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVS 231 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940 +S G A+ S+ EEE +++ D + PE Q Sbjct: 232 VSSG-AEGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQ 265 Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120 K F SG LLPSEVK+ +K LW+NE LCS I DI Q+ G K +SMFF+E++LVPP Sbjct: 266 KNFSSGHLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPP 322 Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300 IKFRPP+KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV W DLQQSIN+LF Sbjct: 323 IKFRPPAKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILF 382 Query: 1301 GNSKTAGLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477 + AG +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPP Sbjct: 383 DSKSAAGPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPP 442 Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISR 1651 YFALRLTYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL P+RK R SISR Sbjct: 443 YFALRLTYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISR 502 Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831 KL SSRGVV G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEK Sbjct: 503 KLPSSRGVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEK 561 Query: 1832 TLRMHYANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ 2008 T+RMHYANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQ Sbjct: 562 TIRMHYANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQ 621 Query: 2009 DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILP 2188 DHI+SAVLLTKKDTFL ++E++ LLYSSG+S + S KPGQK+ ++ +AE+ P+LP Sbjct: 622 DHIISAVLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLP 681 Query: 2189 AILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF---------------- 2320 A+ KP P+WTGKQV+T+LL+HI T+G P VEK KI + +F Sbjct: 682 AVWKPEPLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFFKCRDMGNNSSKKKEHT 739 Query: 2321 ------GRKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRL 2482 + D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRL Sbjct: 740 KVDKLKAARLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRL 799 Query: 2483 FTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQ 2659 FTVFLQ HGFTCGVDDLL+++ +D ER K+LQ +KIGE+ H F+ K+G+ +D M LQ Sbjct: 800 FTVFLQTHGFTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQ 859 Query: 2660 VEIEKAIRIKGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSG 2833 + IEK I GE+A+T LDR M+S+LN+ T S V +L +GLLKP KNC+SLMTTSG Sbjct: 860 LNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSG 919 Query: 2834 AKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRP 3013 AKG NF QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRP Sbjct: 920 AKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRP 979 Query: 3014 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGE 3193 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGE Sbjct: 980 QEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGE 1039 Query: 3194 DGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNL 3373 DGVDVHKT+F+TKF+ LAANQ +L H K + +I ELP AL +K + ++L Sbjct: 1040 DGVDVHKTAFITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSL 1096 Query: 3374 TKQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3553 +K + L L ++DF AQPGEPVGV+AAQS+G+PSTQMTLNTFHH G Sbjct: 1097 SKDKVPGLVL--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHVGR 1154 Query: 3554 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3733 G MNVTLGI RLQEILM AS+ I+TP+MTCPL G + D AK LA LKK++VADI+ES+ Sbjct: 1155 GEMNVTLGILRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESM 1214 Query: 3734 EVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3913 V+VVPFS +K ++ SIYKL++ Y E I+ ED T+E +F+ ELE I+ Sbjct: 1215 NVTVVPFSQRKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIERE 1274 Query: 3914 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVD 4093 +++LSKI+GIKN V +Q SK EGD S S+Q LG D Sbjct: 1275 MVLLSKINGIKNFVPDSQ---SKGSSEGDEVSSSRQ--KENDDDDDEGNDLDVAEDLGSD 1329 Query: 4094 AQKRRRQATDEMDYED 4141 +K++ QA DEMDYED Sbjct: 1330 MKKQKLQANDEMDYED 1345 >ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis sativus] Length = 1652 Score = 1556 bits (4030), Expect = 0.0 Identities = 840/1387 (60%), Positives = 998/1387 (71%), Gaps = 27/1387 (1%) Frame = +2 Query: 62 GATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCKS 241 GA+ESV+ V FSF+TNEEVR S K+T PILLD +GRP GLYDPAMG L++ TLCKS Sbjct: 13 GASESVKVVTFSFMTNEEVRKQSVVKVTAPILLDGMGRPVSGGLYDPAMGSLDETTLCKS 72 Query: 242 CGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLEL 421 CGQR F CPGHCGHIDLVSPVYNPLLF IL N L+ TCF C+HFR V+ C LEL Sbjct: 73 CGQRPFYCPGHCGHIDLVSPVYNPLLFVILHNFLRCTCFSCHHFRAGESMVENCKTLLEL 132 Query: 422 IIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQYSEAM 601 I+ G+I AK ++ Y KN + +WTSLQ+SEA+ Sbjct: 133 ILDGEIAKAKELEEEWMNSKSRTKSSHSMYT---------YERKNGQPETWTSLQFSEAI 183 Query: 602 SLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNKLSMGKA 778 S++ + + +++ CK CGAK+PKIT P FGWFH+ + RAN I+ SK +S G A Sbjct: 184 SVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQKRANAIRRSKPVSVSSG-A 242 Query: 779 KRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQKEFFSG 958 + S+ EEE +++ D + PE QK F SG Sbjct: 243 EGVSSLEEETTTEATVEDFEDVS-------------------------PEVFMQKNFSSG 277 Query: 959 PLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPP 1138 LLPSEVK+ +K LW+NE LCS I DI Q+ G K +SMFF+E++LVPPIKFRPP Sbjct: 278 HLLPSEVKDILKRLWKNEALLCSFISDISQQG---HGNKAGHSMFFLESVLVPPIKFRPP 334 Query: 1139 SKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTA 1318 +KGGDSVMEHPQTVLLNKV+ SNISL N H N SE SKIV W DLQQSIN+LF + A Sbjct: 335 AKGGDSVMEHPQTVLLNKVLQSNISLGNGHANKSEHSKIVRLWMDLQQSINILFDSKSAA 394 Query: 1319 GLRENMAT-GICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRL 1495 G +N A+ GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRL Sbjct: 395 GPGKNDASLGICQLLEKKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 454 Query: 1496 TYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKL--PPNRKIRTSISRKLHSSR 1669 TYPERVT WNV KLR+AIING E HPGATHY+DKLATVKL P+RK R SISRKL SSR Sbjct: 455 TYPERVTAWNVQKLRNAIINGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSR 514 Query: 1670 GVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHY 1849 GVV G + ++E EGK+V RHLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKT+RMHY Sbjct: 515 GVVVDQGCD-DYEFEGKIVNRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHY 573 Query: 1850 ANCS-TYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2026 ANCS TYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY+ PTSGEP R LIQDHI+SA Sbjct: 574 ANCSITYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISA 633 Query: 2027 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2206 VLLTKKDTFL ++E++ LLYSSG+S + S KPGQK+ ++ +AE+ P+LPA+ KP Sbjct: 634 VLLTKKDTFLNFDEFSQLLYSSGISTSKACASSEKPGQKIFTLDFDAEMLPVLPAVWKPE 693 Query: 2207 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKI-------------KKEYF------GRK 2329 P+WTGKQV+T+LL+HI T+G P VEK KI KKE+ + Sbjct: 694 PLWTGKQVVTALLDHI--TQGSPPFFVEKDVKIPRGFLILDEGNSKKKEHTKVDKLKAAR 751 Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509 D+ +LLI KNELV GVIDKAQFG+YGLVHTVQE YGS+TAG+LLSV+SRLFTVFLQ HG Sbjct: 752 LDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGLLLSVMSRLFTVFLQTHG 811 Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686 FTCGVDDLL+++ +D ER K+LQ +KIGE+ H F+ K+G+ +D M LQ+ IEK I Sbjct: 812 FTCGVDDLLLIECMDKEREKQLQICEKIGEQVHLGFLKVKDGEKLDPMTLQLNIEKTISY 871 Query: 2687 KGESAITQLDRMMSSELNDLT--SVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFT 2860 GE+A+T LDR M+S+LN+ T S V +L +GLLKP KNC+SLMTTSGAKG NF Sbjct: 872 NGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVKNCISLMTTSGAKGGTANFQ 931 Query: 2861 QISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMA 3040 QISS LGQQQLEGKRVPRMVSGKTLPCFPPWD ASRAGGFI DRFLTGLRPQEYYFHCMA Sbjct: 932 QISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLTGLRPQEYYFHCMA 991 Query: 3041 GREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTS 3220 GREGLVDTAVKTSRSGYLQRCL+K+LE LK+CYDHTVRDADGSV+QF YGEDGVDVHKT+ Sbjct: 992 GREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDADGSVIQFQYGEDGVDVHKTA 1051 Query: 3221 FVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3400 F+TKF+ LAANQ +L H K + +I ELP AL +K + ++L+K + L Sbjct: 1052 FITKFEALAANQDMLYENSHH---QLGKYNVFINELPSALREKGEFIYNSLSKDKVPGLV 1108 Query: 3401 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3580 L ++DF AQPGEPVGV+AAQS+G+PSTQMTLNTFHHAG G MNVTLGI Sbjct: 1109 L--KEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGI 1166 Query: 3581 PRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSV 3760 PRLQEILM AS+ I+TP+MTCPL G + D AK LA LKK++VADI+ES+ V+VVPFS Sbjct: 1167 PRLQEILMTASQDIKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQ 1226 Query: 3761 KKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISG 3940 +K ++ SIYKL++ Y E I+ ED T+E +F+ ELE I+ +++LSKI+G Sbjct: 1227 RKREICSIYKLRIDFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKING 1286 Query: 3941 IKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQAT 4120 IK V +Q SK EGD S S+Q LG D +K++ QA Sbjct: 1287 IKXFVPDSQ---SKGSSEGDEVSSSRQ---EEMDDDDEGNDLDVAEDLGSDXEKQKLQAN 1340 Query: 4121 DEMDYED 4141 DEMDYED Sbjct: 1341 DEMDYED 1347 >ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine max] Length = 1651 Score = 1551 bits (4015), Expect = 0.0 Identities = 825/1390 (59%), Positives = 996/1390 (71%), Gaps = 24/1390 (1%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 M TTEGAT SVEAV FSFLT++E+R S KIT+PIL+D L P PDGLYD A+GP +D Sbjct: 1 MVLTTEGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDD 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 ++LCKSCGQ S CPGH GHI+LVSPVYNPL+F IL N+LQRTCF C+HFR ++V Sbjct: 61 KSLCKSCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIR 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 QLELI+KGDI+ AK G + Y+++ L ++ WTSL Sbjct: 121 TSQLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGEN-WTSL 179 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNK-YTRANIIKGSKLNK 760 Q+SEAMS+L +L+T + +C++CGAKNPKI+ P FGWFH+N+ + TRA+ I+ Sbjct: 180 QFSEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSV---- 235 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940 E E ND ++G D+TD E D +K K Y L + Sbjct: 236 ------------ESETTNDDISLGGGDTTDVEDITSAGTAKRDKRKKEKLSYK----LAE 279 Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120 + SG LLPS+VK ++LLWENE +LCS I DIQ + G K +SMFF+E + VPP Sbjct: 280 QNKLSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLENIFVPP 336 Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300 IKFRPP+KGGD+VMEHPQTVLL KV+ NISL + H+N S+ SK++ RW DLQQS+N+LF Sbjct: 337 IKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQSVNMLF 396 Query: 1301 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480 N KTA + ++ATGICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPY Sbjct: 397 DN-KTASGKRDVATGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPY 455 Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660 FALRL+YPERVTPWNV KLR+AI+NG E HPGATHY DK++ VKLPP K+ + SRKL Sbjct: 456 FALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLP 515 Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840 +SRGV+ GK +HE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAH+VRVL GEKT+R Sbjct: 516 TSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKGEKTVR 575 Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2020 MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV Sbjct: 576 MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 635 Query: 2021 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2200 SA LLTKKDTFL++EE+N LLYSSGVS A F K GQKV + NSE+E+ PAI K Sbjct: 636 SAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFPPAIWK 695 Query: 2201 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGR-----------------K 2329 P P+WTGKQVI++LL +I TRG P T EK+ KI +F K Sbjct: 696 PEPLWTGKQVISALLYYI--TRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKKKDK 753 Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509 DE LLI KN+LV GV+DKAQFG+YG++HTVQE YGS+ AG LLS LSRLFT FLQMHG Sbjct: 754 PDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQMHG 813 Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686 FTCGVDDL++ + D+ERM +L+ + IG+ H +FIG K D ID + LQ+ IEK IR Sbjct: 814 FTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKKIRS 873 Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863 GE+A+T LDR M+S LN TS + +L +G+LKP KNC+SLMTTSGAKGS+VNF Q Sbjct: 874 NGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVNFQQ 932 Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043 ISS LGQQ+LEGKRVPRMVSGKTLPCFPPWD + RAGGFI DRFLT L PQEYYFHCMAG Sbjct: 933 ISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHCMAG 992 Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223 REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF Sbjct: 993 REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1052 Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403 +T+F L+ N+ E + ++ +S YI +LPEALE K + F ++ +L Sbjct: 1053 ITEFGALSTNK---ELVFSNYCRQLDRSSPYINKLPEALEGKAEKF------SKQRNLGS 1103 Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583 ++ DF AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP Sbjct: 1104 MEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1163 Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763 RLQEILM A+ I+TP MTCPL K+ DA LA LKK++VADI++S++VSVVP +V Sbjct: 1164 RLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVL 1223 Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943 QV SIYKL MKLY+ + YP ++DITL+D +T+ V FV ELE+ IQ H+ +LSKISGI Sbjct: 1224 GGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGI 1283 Query: 3944 KNIVLSAQSGSSKDIDE----GDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRR 4111 K QS S ++ G K Q LG DAQKR+ Sbjct: 1284 KKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKL 1343 Query: 4112 QATDEMDYED 4141 Q TDE+DYED Sbjct: 1344 QGTDEVDYED 1353 >ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] gi|561018822|gb|ESW17626.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris] Length = 1637 Score = 1519 bits (3934), Expect = 0.0 Identities = 814/1391 (58%), Positives = 989/1391 (71%), Gaps = 25/1391 (1%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 M TEG T SV+AVGFSFLT++E+ S KITNPILL+ L P GLYDPA+GPL+D Sbjct: 1 MVLFTEGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDD 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 ++LCKSCGQ S CPGH GHI+LVSPVYNPL+F IL ++LQRTCF C+HF +R++V+ Sbjct: 61 KSLCKSCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMR 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQ--HSWT 577 Q ELI+KGDI+ AK S+ ++Q +W+ Sbjct: 121 TSQFELIMKGDIIRAKSLDSIISDESNHSGDGD--------------ESQGVEQLGENWS 166 Query: 578 SLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKL 754 SLQ+SEAMS+L + + + +C+ CG NP+I+ P FGWFH+N + + RAN ++ Sbjct: 167 SLQFSEAMSVLRKFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRAL-- 224 Query: 755 NKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFL 934 E E ND ++G ++T+ E + GT K K G L + Sbjct: 225 --------------ESETINDDMSLGGGETTEEED--ITSTGTA-KRDKRKKGKLSSKLA 267 Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114 Q + SG LLPS+VK ++LLWENE +LCS I DIQ + G K +SMFF+E + V Sbjct: 268 AQNK-LSGSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFV 323 Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1294 PPIKFRPP+KGGD VMEHPQTVLL KV+ NISL + H+N + SK++ RW DLQQS+N+ Sbjct: 324 PPIKFRPPTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNL 383 Query: 1295 LFGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1474 LF N KT+G E +A GICQLLEKKEGIFRQKMMGKRVN+ACRSVISPDPYLAVNEIGIP Sbjct: 384 LFDN-KTSGQGE-VAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIP 441 Query: 1475 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1654 PYFALRL+YPERVTPWNV LR+AI+NG + HPGATHY D+ ATVKLPPN K+ + ISRK Sbjct: 442 PYFALRLSYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRK 501 Query: 1655 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1834 L SSRGV+ GK + E EGK+VYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT Sbjct: 502 LPSSRGVILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 561 Query: 1835 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014 +RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDH Sbjct: 562 VRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDH 621 Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194 IVSA LLTKKDTF+T+E + LLYSSGVS FS K GQKV + NSE E+ PAI Sbjct: 622 IVSAALLTKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAI 681 Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK--------- 2329 KP P+WTGKQVI++LL +I TR P TVEK+ KI +F G++ Sbjct: 682 WKPEPLWTGKQVISALLYYI--TRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNK 739 Query: 2330 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2500 DE LLI KN+LV GV+DKAQFG+YG++HTVQE YGS AG LLS LSRLFT FLQ Sbjct: 740 VEPDDEDKLLIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQ 799 Query: 2501 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2677 MHGFTCGVDDL+I +E D+ERM +L+ ++IG+ H +FIG D ID + LQ+ IEK Sbjct: 800 MHGFTCGVDDLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKK 859 Query: 2678 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2854 IR GE+A+T LDR M+S LN TS + +L G+LKP KNC+SLMTTSGAKGS+VN Sbjct: 860 IRSNGEAALTYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVN 919 Query: 2855 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3034 F QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFLTGL PQEYYFHC Sbjct: 920 FQQISSHLGQQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHC 979 Query: 3035 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3214 MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH Sbjct: 980 MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHH 1039 Query: 3215 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3394 TSF+ KF+ L+ N+ ++ G+ +S YI +LP+AL++K ++F + KQ+ + Sbjct: 1040 TSFINKFEALSTNKELV--YGNCCRQLD-RSSPYINKLPDALKEKAENFFRDSLKQR--N 1094 Query: 3395 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3574 L KR +F AQPGE VGV+A+QSVG+P+TQMTLNTFH AG G MNVTL Sbjct: 1095 LGSLKRAEFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1154 Query: 3575 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPF 3754 GIPRLQEI+M A+ I+TP MTCPL K+ ++A LA LKK++VADI++S++VSVVP Sbjct: 1155 GIPRLQEIVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPV 1214 Query: 3755 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3934 SV QV SIYKL MKLY+P+ YP +SDITLED T+ + FV ELE+ I+ H+ +LSKI Sbjct: 1215 SVLGGQVCSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKI 1274 Query: 3935 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQ--VXXXXXXXXXXXXXXXXXXXLGVDAQKRR 4108 SGIK QS S+ D GS+S+ LG DAQKR+ Sbjct: 1275 SGIKKFKTDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRK 1334 Query: 4109 RQATDEMDYED 4141 RQ TDE+DYED Sbjct: 1335 RQGTDEVDYED 1345 >ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum tuberosum] Length = 1675 Score = 1500 bits (3884), Expect = 0.0 Identities = 783/1392 (56%), Positives = 992/1392 (71%), Gaps = 31/1392 (2%) Frame = +2 Query: 59 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 238 +GA+E+VEAV FSF+T+EEVR S K+T+P LLD L P P+GLYDPAMGPL+ + CK Sbjct: 3 QGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62 Query: 239 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 418 C Q + C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC +LE Sbjct: 63 FCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120 Query: 419 LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNL-KQHSWTSLQYSE 595 LI KGD+VGAK H+ + + + K+ SW + Q++E Sbjct: 121 LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQFTE 180 Query: 596 AMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNKLSMG 772 AM+++D ++ + +C C AKNPKI P+FG FH+++ NK R N I G + N G Sbjct: 181 AMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNLHDTG 240 Query: 773 KAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLKQKEF 949 ++ N + E NA + +G+ +++ +S DG +S A+K +GG +QK+ Sbjct: 241 GSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKARKRQGGDQSDVVEQQKDS 295 Query: 950 FSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKF 1129 FS LPS+V++ ++ LWENE LC+ CDIQ + + SG SMFF++++LVPPIKF Sbjct: 296 FSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLDSILVPPIKF 355 Query: 1130 RPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNS 1309 RPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R DLQQS+NVLF + Sbjct: 356 RPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQSVNVLFDSK 415 Query: 1310 KTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFA 1486 +G ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIPPYFA Sbjct: 416 TASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIPPYFA 475 Query: 1487 LRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSS 1666 LRLTYPER+TPWN K+RDA+ING E HPGA + D++ATVKLP N+K+R +ISRKL SS Sbjct: 476 LRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRVAISRKLPSS 535 Query: 1667 RGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMH 1846 RG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKTLRMH Sbjct: 536 RGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMH 595 Query: 1847 YANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSA 2026 YANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+ RGLIQDHIV A Sbjct: 596 YANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDHIVGA 655 Query: 2027 VLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPV 2206 V+LT K+TFLT E+N LLY SGV AA S KVSV++ E ++ +LPA+ KP Sbjct: 656 VILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQTVLPAVWKPK 715 Query: 2207 PMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS---------------DEA 2341 P+WTGKQVIT+LLNH+ T+G P TV+ GKI YF +S E Sbjct: 716 PLWTGKQVITALLNHL--TKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQEDRTAEN 773 Query: 2342 NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCG 2521 LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HGFTCG Sbjct: 774 EFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHGFTCG 833 Query: 2522 VDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIKGESA 2701 VDDL+I+ D+ R ++L+ D +GEE H F+ K G+I +ELQ+EIEKA+ E+A Sbjct: 834 VDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAMSSNKEAA 892 Query: 2702 ITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLG 2881 LD M ++L + S N EL KGLLKPFP+NC++LMT +GAKGS VNF QISS LG Sbjct: 893 TAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQISSYLG 952 Query: 2882 QQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVD 3061 QQ+LEGKRVPRMVSGKTLPCFPPWD ASRAGG+++DRFL+GLRPQEYYFHCMAGREGLVD Sbjct: 953 QQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGREGLVD 1012 Query: 3062 TAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDT 3241 TAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+ F Sbjct: 1013 TAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLKNFKA 1072 Query: 3242 LAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRK-- 3415 L NQ + + H K + YI++LP+ LE+K K F TK+ L +K Sbjct: 1073 LKNNQETICQKLRH----GRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKKLGKLVKKEE 1128 Query: 3416 ----------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMN 3565 DF A GEPVGV+A QSVG+PSTQMTLNTFH AG G MN Sbjct: 1129 MVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGRGEMN 1188 Query: 3566 VTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSV 3745 VTLGIPRLQEILM ASE I+TP++TCP L ++ +DA+ L A +KK++VAD++ES+EV + Sbjct: 1189 VTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKL 1248 Query: 3746 VPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIML 3925 +P S+ HQVS +YKL +KL + + ++ EDC T++ +F+ ELE+ I++HL +L Sbjct: 1249 LPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESHLALL 1302 Query: 3926 SKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKR 4105 SKI+GI+N S++S S + +E + ++ ++ L DAQKR Sbjct: 1303 SKINGIQNFKTSSESVDSDETEENASSTRHEE------EMLDDEDEDERTEDLSSDAQKR 1356 Query: 4106 RRQATDEMDYED 4141 ++Q TDEMDY+D Sbjct: 1357 KQQTTDEMDYDD 1368 >ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer arietinum] Length = 1650 Score = 1494 bits (3869), Expect = 0.0 Identities = 799/1386 (57%), Positives = 986/1386 (71%), Gaps = 20/1386 (1%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA TEGAT SV+AV FSFLT+EE+ S KITNPILLD L P GLYDPA+GP + Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 ++ C+SCGQ S+ CPGH GHI+LVSPVYNPL+F +L N+L+RTCF C+HF+ +R +V+ Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPVYNPLMFSMLSNVLRRTCFSCHHFQASRNEVELR 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 A QLELI+KG+I AK G Q +S +WTSL Sbjct: 121 ANQLELIMKGNIAKAKNLDAINLDESADLSD-------GNDSQC---SSDEQLGENWTSL 170 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760 Q+SEAMS+L + + + +C+ CG NPKIT P FGWFHV + RAN+I G + Sbjct: 171 QFSEAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDASL 230 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQ 940 S E +D ++G+ D+TD E + T +S K + L + Sbjct: 231 AS------------EIIHDDISLGNGDTTDVED--ITSGDTANSNAKRQNK------LAR 270 Query: 941 KEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPP 1120 SG LLPS+V+ ++LLWENE +LC I DIQ + G K +SMFF++ + VPP Sbjct: 271 HNKLSGSLLPSQVQGILELLWENEARLCLYISDIQGQGF---GKKAGHSMFFLDNIYVPP 327 Query: 1121 IKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLF 1300 IKFRPP+KG D V EH QTVLL +V+ SNISL H+N S+ S ++ RW DLQ+S+N+LF Sbjct: 328 IKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNLLF 387 Query: 1301 GNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480 N KTA ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY Sbjct: 388 DN-KTASGQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 446 Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660 FALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+ SRKL Sbjct: 447 FALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSRKLQ 506 Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840 SSRGV+ GK ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+R Sbjct: 507 SSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVR 566 Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIV 2020 MHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHIV Sbjct: 567 MHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIV 626 Query: 2021 SAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILK 2200 SA LLTKKDTFL+ EE+N LLYSSGVS F KPGQK+ + NS++E+ PAI K Sbjct: 627 SAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPAIFK 686 Query: 2201 PVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK----------- 2329 P P+WTGKQVI++LL +I T+G P TVEK+ KI +F G+K Sbjct: 687 PEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIKKDE 744 Query: 2330 SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509 DE LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG Sbjct: 745 PDEDKLLIYRNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 804 Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686 FTCGVDDLL+ + D ER +L+ ++IG+ H +FIG EGD ID + +Q+ +EK IR Sbjct: 805 FTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKKIRS 864 Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863 GE+AIT LDR M S LN TS V L +G+LKP KN +SLMTTSGAKGS+VNF Q Sbjct: 865 NGEAAITYLDRKMISNLNSRTSTGVLKVLLSEGILKPSGKNWISLMTTSGAKGSMVNFQQ 924 Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043 ISS LGQQ+LEGKRVPRMVSGKTLPCF WD + RAGGFI DRFLT LRPQEYYFHCMAG Sbjct: 925 ISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 984 Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223 REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+TSF Sbjct: 985 REGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQTSF 1044 Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403 + KF+ L+ N+ ++ D KS YI +LP+AL+ K + F+ + + +QR+S + Sbjct: 1045 INKFEALSTNKELVYSNCCRELD---KSSPYINKLPDALKGKAEKFILDSSSKQRNSGSM 1101 Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583 +F AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP Sbjct: 1102 -THTNFLHLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1160 Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763 RLQEIL AS I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP +V+ Sbjct: 1161 RLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVTVQ 1220 Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943 ++ SIYKL MKL++P+ YP ++D+TL+D +T+ V FV LE+ I+ ++ +L+KISGI Sbjct: 1221 DGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKISGI 1280 Query: 3944 KNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATD 4123 N AQ SS ++ + K+ LG+DAQK +RQ D Sbjct: 1281 TNFKTDAQPNSSNGAEDDPSNGKTND----DDDDDGDADDTEGAEDLGLDAQKSKRQVVD 1336 Query: 4124 EMDYED 4141 ++DY+D Sbjct: 1337 DVDYDD 1342 >ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum lycopersicum] Length = 1677 Score = 1492 bits (3863), Expect = 0.0 Identities = 781/1396 (55%), Positives = 988/1396 (70%), Gaps = 35/1396 (2%) Frame = +2 Query: 59 EGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTLCK 238 +GA+E+VEAV FSF+T+EEVR S K+T+P LLD L P P+GLYDPAMGPL+ + CK Sbjct: 3 QGASETVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQCK 62 Query: 239 SCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQLE 418 C Q + C GHCGHI+LVSPVYNPLLF +L NLLQRTCF+C+HFR +R +V+KC +LE Sbjct: 63 FCSQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSELE 120 Query: 419 LIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLP-----RQVPNYNSKNLKQHSWTSL 583 LI KGD+VGAK H+ R YN K+ SW + Sbjct: 121 LIAKGDVVGAKMIDALSPDNSTDREESEGSHMSCTMDDLNVRDHCEYN----KRPSWDNF 176 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPNKYTRANIIK-GSKLNK 760 Q++EAM+++D ++ + +C C AKNPKI P+FG FH+++ NK R N I G + N Sbjct: 177 QFTEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMDISNKQIRENYINSGRRFNL 236 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS-AQKVKGGYLYPEFLK 937 G ++ N + E NA + +G+ +++ +S DG +S +K +GG + Sbjct: 237 HDTGGSEENPSPEVVNATEP--LGEAETSLCVTST---DGVENSKGRKRQGGDQSDVVEQ 291 Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117 QK+ FS LPS+V++ ++ LWENE LC+ CDIQ + + SG SMFF++++LVP Sbjct: 292 QKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHRNTSGKVAGPSMFFLDSILVP 351 Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297 P+KFRPP+KGGDS+MEHP TVLL KV+ +NI+L N H+N + RSKI+ R DLQQS+NVL Sbjct: 352 PVKFRPPAKGGDSIMEHPHTVLLGKVIQANIALGNAHINRAGRSKIISRLMDLQQSVNVL 411 Query: 1298 FGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIP 1474 F + +G ++++ +GICQ+LEKKEGIFRQKMMGKRVN+ACRSVISPDPYL+VNEIGIP Sbjct: 412 FDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVNEIGIP 471 Query: 1475 PYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRK 1654 PYFA RLTYPER+TPWN K+RDA+ING E HPGA + D++ATVKLP N+K+R +ISRK Sbjct: 472 PYFASRLTYPERLTPWNAVKMRDAVINGPENHPGAISFADRIATVKLPSNKKMRVAISRK 531 Query: 1655 LHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKT 1834 L SSRG V Q G+N E+E EGKVVYRHLQDGD+VLVNRQPTLHKPSIMAHVVRVL GEKT Sbjct: 532 LPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKT 591 Query: 1835 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDH 2014 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNAN QYI+PT G+ RGLIQDH Sbjct: 592 LRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRGLIQDH 651 Query: 2015 IVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAI 2194 IV AV+LT K+TFL+ E+N LLY SGV AA S KVS+++ E ++ +LPA+ Sbjct: 652 IVGAVILTMKNTFLSLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSIVDFEGVVQTVLPAV 711 Query: 2195 LKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS-------------- 2332 KP P+WTGKQVIT+LLNH+ T G P TV+ GKI YF +S Sbjct: 712 WKPKPLWTGKQVITALLNHL--TNGCPPCTVKNKGKIPYAYFLSESRLVEYQSREEQEDR 769 Query: 2333 -DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509 E LI KNELV GVIDKAQFG++GLVHT+QE YGS+ AGILLS LSRLFT+FLQ+HG Sbjct: 770 TAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQLHG 829 Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIRIK 2689 FTCG+DDL+I+ D+ R ++L+ D +GEE H F+ K G+I +ELQ+EIEKAI Sbjct: 830 FTCGIDDLVILPHYDIRRKEELE-GDDVGEEAHCDFVKFKRGEIGPLELQLEIEKAISSN 888 Query: 2690 GESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQIS 2869 E A LD M ++L + S N EL KGLLKPFP+NC++LMT +GAKGS VNF QIS Sbjct: 889 KEVATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQQIS 948 Query: 2870 SLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGRE 3049 S LGQQ+LEGKRVPRMVSGKTLPCFP WD ASRAGG+++DRFL+GLRPQEYYFHCMAGRE Sbjct: 949 SYLGQQELEGKRVPRMVSGKTLPCFPAWDCASRAGGYVSDRFLSGLRPQEYYFHCMAGRE 1008 Query: 3050 GLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVT 3229 GLVDTAVKTSRSGYLQRCL+K+LE LKVCYD+TVRDADGS++QF YGEDGVDVH+TSF+ Sbjct: 1009 GLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTSFLK 1068 Query: 3230 KFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRK 3409 F L NQ + + H K + YI++LP+ L +K K F + TK+ L + Sbjct: 1069 NFKALKNNQETICQKLRH----GCKLNSYIEKLPDGLGEKVKHFWESKTKKLEKKLGMLV 1124 Query: 3410 RK------------DFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGL 3553 +K DF A GEPVGV+A QSVG+PSTQMTLNTFH AG Sbjct: 1125 KKEEMVKQLKEEEADFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTFHLAGR 1184 Query: 3554 GAMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESI 3733 G MNVTLGIPRLQEILM ASE I+TP+MTCP L K+ +DA+ L A +KK++VAD++ES+ Sbjct: 1185 GEMNVTLGIPRLQEILMTASEAIKTPIMTCPFLGWKSKNDAQSLLAKVKKITVADMIESM 1244 Query: 3734 EVSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAH 3913 EV ++P S+ HQVS +YKL +KL + + ++ EDC T++ +F+ ELE+ I++H Sbjct: 1245 EVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELEDAIESH 1298 Query: 3914 LIMLSKISGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVD 4093 L +LSKI+GI+N S++S S + +E + ++ ++ L D Sbjct: 1299 LALLSKINGIQNFKTSSESVDSDETEENASSTRREE----EMLDDDDDDEDERTEDLSSD 1354 Query: 4094 AQKRRRQATDEMDYED 4141 AQKR++Q TDEMDY+D Sbjct: 1355 AQKRKQQTTDEMDYDD 1370 >ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer arietinum] Length = 1660 Score = 1490 bits (3857), Expect = 0.0 Identities = 792/1389 (57%), Positives = 984/1389 (70%), Gaps = 23/1389 (1%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA TEGAT SV+AV FSFLT+EE+ S KITNPILLD L P GLYDPA+GP + Sbjct: 1 MALATEGATNSVKAVAFSFLTDEEILKSSRVKITNPILLDTLHSPVAGGLYDPALGPFHE 60 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 ++ C+SCGQ S+ CPGH GHI+LVSP YNPL+F +L N+L+RTCF C+HF+ +R++V+ Sbjct: 61 KSPCQSCGQNSYHCPGHFGHIELVSPAYNPLMFSMLSNVLRRTCFSCHHFQASRKEVELR 120 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSL 583 A QLELI+KG+I AK +S +WTSL Sbjct: 121 ANQLELIMKGNIAKAKNLDEINLDESADLCDG----------DDSQCSSAEQLGENWTSL 170 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLNK 760 Q+SEAMS+L + + + +C+ CG NPKIT P FGWFHV + RAN+I G+ ++ Sbjct: 171 QFSEAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSL 230 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDSTDAE--SSGVVYDGTPDSAQKVKGGYLYPEFL 934 S E +D ++G+ D+TD E +SG + + K K Sbjct: 231 AS------------EIIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEK--------Q 270 Query: 935 KQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLV 1114 +G LLPS+V+ ++LLWEN+ +LC I DIQ + G K +SMFF+E + V Sbjct: 271 ISSHTLAGSLLPSQVQRILELLWENDARLCLYISDIQGLGI---GKKAGHSMFFLENIYV 327 Query: 1115 PPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINV 1294 PPIKFRPP+KG D V EH QTVLL +V+ SNISL H+N S+ S ++ RW DLQ+S+N+ Sbjct: 328 PPIKFRPPTKGDDKVSEHAQTVLLTRVLESNISLGQAHLNKSDASVVLRRWMDLQRSVNL 387 Query: 1295 LFGNSKTAG-LRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 1471 LF N +G ++++ TGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI Sbjct: 388 LFDNKTASGESQKDLVTGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGI 447 Query: 1472 PPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISR 1651 PPYFALRLTYPERVTPWNV +LR+AI+NG E HPGAT Y DK +T+KLP +R+ R+ SR Sbjct: 448 PPYFALRLTYPERVTPWNVVELRNAILNGPETHPGATLYADKTSTLKLPLDRRSRSLTSR 507 Query: 1652 KLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEK 1831 +L SSRGV+ GK ++E EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEK Sbjct: 508 RLQSSRGVIMHNGKIHDNEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEK 567 Query: 1832 TLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQD 2011 T+RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQD Sbjct: 568 TVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQD 627 Query: 2012 HIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPA 2191 HIVSA LLTKKDTFL+ EE+N LLYSSGVS F KPGQK+ + NS++E+ PA Sbjct: 628 HIVSAALLTKKDTFLSCEEFNQLLYSSGVSMTGMGPFPGKPGQKIFMSNSDSEMFLFPPA 687 Query: 2192 ILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF------GRK-------- 2329 I KP P+WTGKQVI++LL +I T+G P TVEK+ KI +F G+K Sbjct: 688 IFKPEPLWTGKQVISALLYYI--TKGSPPFTVEKNAKIPSSFFKTRMREGKKRTKDTSIK 745 Query: 2330 ---SDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQ 2500 DE LLI KN+LV GV+DKAQFG+YG+VHTVQEFYGS+TAG LLS LSRLFT FLQ Sbjct: 746 KDEPDEDKLLIYKNDLVRGVVDKAQFGDYGIVHTVQEFYGSNTAGFLLSALSRLFTNFLQ 805 Query: 2501 MHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKA 2677 MHGFTCGVDDLL+ + D ER +L+ ++IG+ H +FIG EGD ID + +Q+ +EK Sbjct: 806 MHGFTCGVDDLLLTEGKDSERTNQLESCEEIGDIVHREFIGVMEGDNIDPITMQLNVEKK 865 Query: 2678 IRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVN 2854 IR GE+AIT LDR M S LN TS V EL +G+LKP KN +SLMTTSGAKGS+VN Sbjct: 866 IRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSEGILKPSGKNWISLMTTSGAKGSMVN 925 Query: 2855 FTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHC 3034 F QISS LGQQ+LEGKRVPRMVSGKTLPCF WD + RAGGFI DRFLT LRPQEYYFHC Sbjct: 926 FQQISSHLGQQELEGKRVPRMVSGKTLPCFTSWDCSPRAGGFIIDRFLTALRPQEYYFHC 985 Query: 3035 MAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHK 3214 MAGREGLVDTAVKTSRSGYLQRCL+K+LECLKVCYDHTVRDADGS++QF YGEDGVDVH+ Sbjct: 986 MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1045 Query: 3215 TSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHS 3394 TSF+ KF+ L+ N+ ++ D +S YI +LP+AL+ K + F+ + + +QR+S Sbjct: 1046 TSFINKFEALSTNKELVYSNCCRELD---ESSPYINKLPDALKGKAEKFIRDSSSKQRNS 1102 Query: 3395 LHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTL 3574 + +F AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTL Sbjct: 1103 GSM-THTNFLQLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTL 1161 Query: 3575 GIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPF 3754 GIPRLQEIL AS I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP Sbjct: 1162 GIPRLQEILTAASAHIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPV 1221 Query: 3755 SVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKI 3934 +V+ ++ SIYKL MKL++P+ YP ++D+TL+D +T+ V FV LE+ I+ ++ +L+KI Sbjct: 1222 TVQDGRICSIYKLMMKLHKPKHYPKYTDVTLKDWEETLRVSFVRGLEDAIENNIALLAKI 1281 Query: 3935 SGIKNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQ 4114 SGI N AQ SS ++ + K+ LG+DAQK +RQ Sbjct: 1282 SGITNFKTDAQPNSSNGAEDDPSNGKTND--DDDDDDDGDADDTEGAEDLGLDAQKSKRQ 1339 Query: 4115 ATDEMDYED 4141 D++DY+D Sbjct: 1340 VVDDVDYDD 1348 >emb|CAN70028.1| hypothetical protein VITISV_029145 [Vitis vinifera] Length = 1350 Score = 1459 bits (3778), Expect = 0.0 Identities = 784/1288 (60%), Positives = 925/1288 (71%), Gaps = 81/1288 (6%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 +++ EG TE VEAV FSF T+EEVR SFKKIT+P++LD++ RP P GLYDPA+G +++ Sbjct: 94 VSFDYEGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDE 153 Query: 224 RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKC 403 T PG+ G I L+ L N F QV+K Sbjct: 154 NT------------PGN-GRILLIVKKREELQX---VNHAASVHFIA--------QVQKY 189 Query: 404 ALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVK---GLPRQVPNYNSKNLKQHSW 574 QLELI KGD+VGAK HV + + S +LKQ W Sbjct: 190 VSQLELISKGDVVGAKNLDSISPSESSYPEDSDGSHVSCSSTVNSSARDNCSVHLKQQEW 249 Query: 575 TSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHV-NMPNKYTRANIIKGSK 751 TSLQ EAMS++D + + +CK C AK+P++T P FGWFH+ + + TRAN+I+GSK Sbjct: 250 TSLQCIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSK 309 Query: 752 LNKLSMGKAKRNSTGEEENANDSSAMGD-VDSTDAESSGVVYDGTPDSAQKV---KGGYL 919 L + A+ S+ E EN ND GD VD+ + SS DG D+ K KG Sbjct: 310 LERPLSRVAEEKSSSEVENVNDMFPWGDGVDTDETHSSIAPTDGIQDTVTKXLERKGAQA 369 Query: 920 YPEFLKQKEFFSGPLLPSE----------------------------VKNHMKLLWENET 1015 EF+KQK FFSGPLLPSE V++ M+ LWENE Sbjct: 370 PIEFIKQKSFFSGPLLPSEVCFLXALEHHHQLPWLMSVVVVNYVVTKVRDIMERLWENEA 429 Query: 1016 QLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKV 1195 +LCS I DI QERL SG K YSMFF+E +LVPPIKFRPPSKG SVMEHPQTVLL KV Sbjct: 430 ELCSFISDILQERLGASGNKAGYSMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKV 489 Query: 1196 MYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKE 1372 + +NI+L N H N+SERSKI+ RW DLQQSINVLF AG + + +GICQLLEKKE Sbjct: 490 LQANIALGNAHANNSERSKIISRWMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKE 549 Query: 1373 GIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAII 1552 G+FRQKMMGKRVN+ACRSVISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNV KLRDAII Sbjct: 550 GVFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAII 609 Query: 1553 NGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYR 1732 NG E+HPGATHYVDKL+TVKL N+K+R SISRKL SSRGVVAQPG++ ++E EGK+VYR Sbjct: 610 NGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYR 669 Query: 1733 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLRMHYANC------------------ 1858 HLQDGDIVLVNRQPTLHKPSIMAHVVRVL GEKTLRMHYANC Sbjct: 670 HLQDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCRVESEHISMLDLDDCSDS 729 Query: 1859 STYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHIVSAVLLT 2038 STYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQYI+P+ G+P RGLIQDHIVSAVLLT Sbjct: 730 STYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLIQDHIVSAVLLT 789 Query: 2039 KKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWT 2218 KKDTFLT E+YN LLYSSG+S+ + F KPG+KVSV++SE E++P+LPAI KP P+W+ Sbjct: 790 KKDTFLTREQYNQLLYSSGLSSGSGSFI-GKPGKKVSVLDSEDEMQPLLPAIWKPEPLWS 848 Query: 2219 GKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFG------------------------- 2323 GKQVIT++LNHI TRG +P T EK GKI +EYFG Sbjct: 849 GKQVITAVLNHI--TRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGSDRRKEKRIE 906 Query: 2324 RKSDEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQM 2503 +K E LLI KNELV GVIDKAQF +YGLVH VQE YGS+TAGILLSVLSRLFTVFLQM Sbjct: 907 KKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLSRLFTVFLQM 966 Query: 2504 HGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQMELQVEIEKAIR 2683 HGFTCGVDDLLI D+ R +L +S+ IGE H KFIG+ G ID ++LQVE+EK I Sbjct: 967 HGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKLQVEVEKIIL 1026 Query: 2684 IKGESAITQLDRMMSSELNDLTSVVNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863 GE+AIT+LDRMM +ELN+LTS VN +L KGL+KPFPKNCLSLMTT+GAKGS VNF+Q Sbjct: 1027 SNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGAKGSTVNFSQ 1086 Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043 ISS LGQQ LEGKRVPRMVSGKTLPCFPPWD A+RAGGFI+DRFLTGL PQEYYFHCMAG Sbjct: 1087 ISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQEYYFHCMAG 1146 Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223 REGLVDTAVKTSRSGYLQRCL+K+LECLKVCYD+TVRD+DGS+VQF YG+DGVDVH+TSF Sbjct: 1147 REGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDDGVDVHQTSF 1206 Query: 3224 VTKFDTLAANQRVL-ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLH 3400 +T+F+ LA NQ V+ E+ G K + YI++LP+ L +KTK F+ ++++ + Sbjct: 1207 ITEFEALAVNQEVVCEKFGQ-----DGKFNGYIQKLPKELRKKTKKFIEGFMEERQDFDN 1261 Query: 3401 LRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGI 3580 ++K+KDF AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G +NVTLGI Sbjct: 1262 MKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGI 1321 Query: 3581 PRLQEILMRASETIQTPVMTCPLLMGKT 3664 PRLQEILM A+ I+TP+MTCPL MG++ Sbjct: 1322 PRLQEILMTAANDIKTPIMTCPLQMGRS 1349 >ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella] gi|482559195|gb|EOA23386.1| hypothetical protein CARUB_v10016563mg [Capsella rubella] Length = 1651 Score = 1455 bits (3767), Expect = 0.0 Identities = 773/1397 (55%), Positives = 977/1397 (69%), Gaps = 32/1397 (2%) Frame = +2 Query: 47 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 226 A TTEGA++ VE+V FSF+T ++VR SF K+T+PILLDN+ RP P GLYDP MGPL D+ Sbjct: 4 AQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPLNDK 63 Query: 227 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 406 CKSCGQ CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF VKKC Sbjct: 64 EACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVKKCV 123 Query: 407 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNY-NSKNLKQHSWTSL 583 QL+LI+KGDIV AK G+ +++ WTSL Sbjct: 124 SQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSL 183 Query: 584 QYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN-KYTRANIIKGSKLNK 760 Q++E +++ M EC +C AKNPK+ P FGW + N AN+I+G K+ K Sbjct: 184 QFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKK 243 Query: 761 LSMGKAKRNSTGEEENANDSSAMGDVDS-TDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 937 ST EN +DS +D+ ++AE S D ++ K + EF K Sbjct: 244 ---------STSSVENPDDSG----IDALSEAEDS--------DKEKREKSTEIAKEFEK 282 Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117 QK+ LLPSEV+ +K LWENE + CS I D+ Q K +YSMFF+E++LVP Sbjct: 283 QKDT-KRDLLPSEVRAILKNLWENEHEYCSFIGDLWQS----GSEKIDYSMFFLESVLVP 337 Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297 PIKFRPP+KGGDSVMEHPQTV LNKV+ SNI+L N N ++SK++ RW +LQ+S+NVL Sbjct: 338 PIKFRPPTKGGDSVMEHPQTVGLNKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVL 397 Query: 1298 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477 F + + + +GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+AVNEIGIPP Sbjct: 398 FDSKAASVQSQKDGSGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPP 457 Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657 FAL+L YPERVTPWNV KLR+AIING +VHPGATHY DKL+TVKLP + K RT+I+ KL Sbjct: 458 CFALKLIYPERVTPWNVEKLREAIINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKL 517 Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837 SSRG + GK + EGKVVYR ++DGD+VLVNRQPTLHKPS+MAH+VRVL GEKTL Sbjct: 518 LSSRGATTELGKTCDINFEGKVVYRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTL 577 Query: 1838 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2017 R+HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY P++G+P R LIQDHI Sbjct: 578 RLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHI 637 Query: 2018 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2197 VS+VLLTK+DTFL + +N LL+SSGV+ FS K G+KV++ S+AE+ ++PAIL Sbjct: 638 VSSVLLTKRDTFLDKDLFNQLLFSSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAIL 697 Query: 2198 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYFGRKS--------------- 2332 KPVP+WTGKQVIT++LN I T+G P TVEK+ K+ ++F +S Sbjct: 698 KPVPLWTGKQVITTVLNLI--TKGHPPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKD 755 Query: 2333 ---------DEANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLF 2485 +E LLI+KNE V GVIDKAQF ++G+VHTV E YGS+ AG LLSV SRLF Sbjct: 756 IDESWKQDLNEDKLLIRKNEFVCGVIDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLF 815 Query: 2486 TVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAK-EGDIDQMELQV 2662 T FLQ+HGFTCGVDDL+I++++D ER K+LQ +K+GE K G + ID +++ Sbjct: 816 TAFLQIHGFTCGVDDLIILKDMDEERTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRS 875 Query: 2663 EIEKAIRIKGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAK 2839 IE+ + GESA+ LDR + ++LN +S V ++L GLLK KNC+SLMT SGAK Sbjct: 876 RIERILYEDGESALASLDRSIVNDLNQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAK 935 Query: 2840 GSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQE 3019 GS VNF QISS LGQQ LEGKRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQE Sbjct: 936 GSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQE 995 Query: 3020 YYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDG 3199 YYFHCMAGREGLVDTAVKTSRSGYLQRCL+K+LE LKV YD TVRDADGS++QF YGEDG Sbjct: 996 YYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDG 1055 Query: 3200 VDVHKTSFVTKFDTLAANQ-RVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLT 3376 VDVH++SF+ KF L NQ VL+R ED S YI +LP +L++ + F+ + Sbjct: 1056 VDVHRSSFIGKFKELTVNQDMVLQRCS---EDMLSGSSSYISDLPISLKKDAEKFVEAMP 1112 Query: 3377 KQQRHSLHLRKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLG 3556 +R + ++++ AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G Sbjct: 1113 MNERIASKFVRQEELLKLVKSKYFESLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRG 1172 Query: 3557 AMNVTLGIPRLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIE 3736 MNVTLGIPRLQEILM A+ I+TP+MTCPLL GKT +DA + L+K++VADI++ +E Sbjct: 1173 EMNVTLGIPRLQEILMTAAADIKTPIMTCPLLKGKTKEDANDITDKLRKITVADIIKDME 1232 Query: 3737 VSVVPFSVKKHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHL 3916 +SVVP+++ K+ + SI+KLK+ LY+PE YP +DIT ED +TM+V+F+ +LE+ I+ H+ Sbjct: 1233 LSVVPYTIHKNDICSIHKLKINLYKPEHYPKNTDITEEDWEETMKVVFLRKLEDAIEIHM 1292 Query: 3917 IMLSKISGIKNIV--LSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGV 4090 ML ++ GI+N V S +G+ D D +G +++ LG Sbjct: 1293 KMLHRMRGIRNFVQDTSPTAGNETDNDNSISGKQTED---------DDDGEGTEVDDLGS 1343 Query: 4091 DAQKRRRQATDEMDYED 4141 DAQKR++QATDEMDYE+ Sbjct: 1344 DAQKRKKQATDEMDYEE 1360 >ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] Length = 1628 Score = 1455 bits (3767), Expect = 0.0 Identities = 783/1386 (56%), Positives = 967/1386 (69%), Gaps = 20/1386 (1%) Frame = +2 Query: 44 MAYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLED 223 MA EGAT ++E+V FSFLTNEE+ S K+T+ L +N+G P GLYDPA GPL D Sbjct: 1 MALANEGATNAIESVAFSFLTNEELLKSSRVKVTDTNLCNNIGHPVRGGLYDPAFGPLLD 60 Query: 224 -RTLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKK 400 R+ C+SCG C GH GHI+LVSPVYNPL+F L +L RTCF C++FR +R++VK+ Sbjct: 61 NRSNCESCGMSKDHCSGHFGHIELVSPVYNPLMFLFLGKILNRTCFSCHYFRASRDEVKR 120 Query: 401 CALQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTS 580 A QLELI+KG+I AK ++ SWTS Sbjct: 121 RASQLELILKGNISKAKSLGEIKLNETIDSVDDDD--------DDSQWSGAEQLGESWTS 172 Query: 581 LQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVN-MPNKYTRANIIKGSKLN 757 LQ+SEAMS++ E + +C CG +PKIT P FG F+V + + RAN+I +K Sbjct: 173 LQFSEAMSVIYEFLAKDYKKCLNCGCISPKITKPTFGRFNVKALSSVQARANVISSAK-- 230 Query: 758 KLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLK 937 +A D D S G + +K L Sbjct: 231 ---------------------AADVQADEEDITSGGAGNSNGNNQILSIK--------LV 261 Query: 938 QKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVP 1117 ++ SG LLPS+V+ +KLLW+NE++LCS I DIQ + G K +SMFF+E + VP Sbjct: 262 EQSSLSGSLLPSQVQEMIKLLWKNESRLCSHISDIQDQGF---GKKAGHSMFFLENIFVP 318 Query: 1118 PIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVL 1297 PIKFRPP K GD+V EHPQTVLL+KV+ SNISL + H S+ I+ RW DLQ S+N+L Sbjct: 319 PIKFRPPLKAGDNVAEHPQTVLLSKVLESNISLADAHRTKSDAYYILRRWQDLQGSVNLL 378 Query: 1298 FGNSKTAGLRENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 1477 F N KT+ + A+GICQLL+KKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP Sbjct: 379 FDN-KTSLRSQKDASGICQLLDKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPP 437 Query: 1478 YFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKL 1657 YFALRLTYPERVTPWN KL DAI+NG + HPGA Y DK +T++L ++ +R+S SR+L Sbjct: 438 YFALRLTYPERVTPWNSAKLMDAILNGPDTHPGAILYTDKTSTLRLQKDKSLRSSTSRRL 497 Query: 1658 HSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTL 1837 SSRGV+ GK EHE EGKVVYRHL+DGD+VLVNRQPTLHKPSIMAHVVRVL GEKT+ Sbjct: 498 QSSRGVIMHHGKIHEHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTV 557 Query: 1838 RMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQDHI 2017 RMHYANCSTYNADFDGDE+NVHFPQDEISRAEA+NIVNANNQY+ PTSG+P R LIQDHI Sbjct: 558 RMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHI 617 Query: 2018 VSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQKVSVINSEAEIEPILPAIL 2197 VSA LLTKKDTFL+ +E+N LLYSSGVS FS KPGQKV + NSE+E+ PAI Sbjct: 618 VSAALLTKKDTFLSCQEFNQLLYSSGVSMTGMGSFSCKPGQKVLMSNSESEMFLFPPAIF 677 Query: 2198 KPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF--------------GRKSD 2335 KP P+WTGKQVI++LL +I T+G P TVEK+ KI +F RK D Sbjct: 678 KPEPLWTGKQVISALLCYI--TKGRPPFTVEKNAKIPSSFFKTQTGEIKKHTKDTSRKKD 735 Query: 2336 EA--NLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHG 2509 E LLI +N+LV GV+DKAQFG+YG+VHTVQEFYGS+TAGILLS LSRLFT FLQMHG Sbjct: 736 ELEDKLLIYRNDLVRGVVDKAQFGDYGMVHTVQEFYGSNTAGILLSALSRLFTNFLQMHG 795 Query: 2510 FTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGD-IDQMELQVEIEKAIRI 2686 FTCGVDDLLI D ER+ +L+ ++IG+ H +FIG E + ID + +Q+ +EK IR Sbjct: 796 FTCGVDDLLIKVGKDSERLNQLESCEEIGDIVHREFIGVMESENIDPITMQLNVEKKIRS 855 Query: 2687 KGESAITQLDRMMSSELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQ 2863 GE+AIT LDR M S LN TS V EL KG LKP KN +SLMTTSGAKGS+VNF Q Sbjct: 856 NGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSGKNWISLMTTSGAKGSMVNFQQ 915 Query: 2864 ISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAG 3043 ISS LGQQ+LEGKRVPRMVSGKTLPCFP WD + RAGGFI DRFLT LRPQEYYFHCMAG Sbjct: 916 ISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGFIIDRFLTALRPQEYYFHCMAG 975 Query: 3044 REGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSF 3223 REGLVDTAVKTSRSGYLQRCL+K+LE LKVCYDHTVRD+DGS++QF YGEDGVDVH+TSF Sbjct: 976 REGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDSDGSIIQFHYGEDGVDVHQTSF 1035 Query: 3224 VTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHL 3403 + KF+ L+ N+ ++ D +S YI +LP+AL+ K ++F+ + + +QR+S + Sbjct: 1036 INKFEALSINKELIYSNCCRQLD---RSSPYINKLPDALKGKAENFIRDFSSKQRNSSSM 1092 Query: 3404 RKRKDFXXXXXXXXXXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIP 3583 K DF AQPGEPVGV+A+QSVG+P+TQMTLNTFH AG G MNVTLGIP Sbjct: 1093 -KEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIP 1151 Query: 3584 RLQEILMRASETIQTPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVK 3763 RL EI++ AS+ I+TP MTCPL K+ +DA RLA +KK++VADI+ES++VSVVP +VK Sbjct: 1152 RLHEIVVAASKNIKTPFMTCPLRPNKSMEDAIRLADKMKKITVADIIESMKVSVVPVAVK 1211 Query: 3764 KHQVSSIYKLKMKLYRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGI 3943 + ++ SIYKL MKL++P+ YP ++D+TLED +T+ V FV ELE+ I+ H+ +L++ISGI Sbjct: 1212 EGRICSIYKLTMKLHKPKHYPKYTDVTLEDWEETLRVGFVRELEDAIENHISLLARISGI 1271 Query: 3944 KNIVLSAQSGSSKDIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATD 4123 K+ + S + D D + + +Q G DAQK +++ATD Sbjct: 1272 KDFQGKSNSSNGLDNDHSNESASNQNGQTDDDDEVGDTEDAEED---GFDAQKSKQRATD 1328 Query: 4124 EMDYED 4141 E+DY+D Sbjct: 1329 EVDYDD 1334 >ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum] gi|557103957|gb|ESQ44311.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum] Length = 1697 Score = 1439 bits (3725), Expect = 0.0 Identities = 776/1433 (54%), Positives = 972/1433 (67%), Gaps = 68/1433 (4%) Frame = +2 Query: 47 AYTTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDR 226 A T EGA++ VE+V FSF+T E+VR S K+TNP+LLDN+ RP P GLYDP MGPL+DR Sbjct: 4 AQTIEGASQVVESVRFSFMTEEDVRKHSVMKVTNPVLLDNVERPVPGGLYDPLMGPLDDR 63 Query: 227 TLCKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCA 406 T CKSCGQ S CPGHCGHI+LV P+Y+PLLF +L+N LQRTCFFC+HF N+ V++C Sbjct: 64 TSCKSCGQLSLVCPGHCGHIELVYPIYHPLLFNLLYNFLQRTCFFCHHFMANKNDVERCV 123 Query: 407 LQLELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNSKNLKQHSWTSLQ 586 QL+LI+KG++V AK + + ++ + WTSLQ Sbjct: 124 SQLKLIMKGNLVAAKQLDSRATDSSE--------ECEDSEMEKERCEDSDMGKQRWTSLQ 175 Query: 587 YSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFH-VNMPNKYTRANIIKGSKLNKL 763 ++E L++ + + C C AK PK+ P FGW V M AN+I+G K+ K Sbjct: 176 FAEVTDLMNTFLRLKSKSCGSCKAKPPKLEKPMFGWVRIVGMSASAIGANVIRGIKVKK- 234 Query: 764 SMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDSAQKVKGGYLYPEFLKQK 943 S EN NDS D + ++ V DG+ +K K + EF K + Sbjct: 235 --------SASSVENPNDS------DDSGIDALSEVEDGS--EKKKRKSSEVAEEFAKHQ 278 Query: 944 EFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSISGMKGNYSMFFIEALLVPPI 1123 L PSEVK +K LWENE + CS I D+ Q +YSMFF+E +LVPP Sbjct: 279 NNTRRDLFPSEVKKILKGLWENEHEFCSFIGDLWQSESE----NVDYSMFFLENILVPPT 334 Query: 1124 KFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSERSKIVPRWFDLQQSINVLFG 1303 KFR P+KGGDSVMEHPQTV LNKV+ SNISL N N ++ KI+ RW +LQ+S+NVLF Sbjct: 335 KFRAPTKGGDSVMEHPQTVGLNKVLESNISLGNACTNKLDQPKIISRWMNLQESVNVLF- 393 Query: 1304 NSKTAGLR-ENMATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPY 1480 +SKTA ++ + TGICQ LEKKEG+FRQKMMGKRVN+ACRSVISPDP++AVN+IGIPP Sbjct: 394 DSKTATVKSQKEGTGICQTLEKKEGLFRQKMMGKRVNHACRSVISPDPFIAVNDIGIPPC 453 Query: 1481 FALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKLATVKLPPNRKIRTSISRKLH 1660 FAL+LTYPERVTPWNV KLR+AIING ++HPGATHY DK++T+KLPP RK R +I+RKL Sbjct: 454 FALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDKVSTMKLPPTRKARIAIARKLF 513 Query: 1661 SSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLSGEKTLR 1840 SSRGV + GK + EGKVVYRH+QDGD+VLVNRQPTLHKPSIMAH+VRVL GEKTLR Sbjct: 514 SSRGVTTELGKTCDVNFEGKVVYRHMQDGDVVLVNRQPTLHKPSIMAHMVRVLKGEKTLR 573 Query: 1841 MHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANNQYILPTSGEPTRGLIQ---- 2008 +HYANCSTYNADFDGDEMNVHFPQDEISRAEA+NIVNANNQY P++G+P R LIQ Sbjct: 574 LHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYSRPSNGDPLRALIQVVHP 633 Query: 2009 ----------------------------DHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSA 2104 DHIVS+VLLTK+DTFL +E+N LL+SSGV+ Sbjct: 634 SYFFKSLYSFHELGCLPVIFMDLACTQQDHIVSSVLLTKRDTFLDKDEFNQLLFSSGVTD 693 Query: 2105 AARDFFSSKPGQKVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLT 2284 FS + G+KV S AE+ + PAILKPVP+WTGKQVIT++LN I T+G P + Sbjct: 694 MVLSSFSGRSGKKVIQSASNAELLTVTPAILKPVPLWTGKQVITAVLNEI--TKGHPPFS 751 Query: 2285 VEKSGKIKKEYFGRKSDEAN------------------------------LLIQKNELVH 2374 VEK+ K+ ++F +S E LL++KNE V Sbjct: 752 VEKATKLPVDFFKCRSKEVKCKSGESNEKNHLTTKQDFDESWKKDLNEDKLLVRKNEFVR 811 Query: 2375 GVIDKAQFGEYGLVHTVQEFYGSDTAGILLSVLSRLFTVFLQMHGFTCGVDDLLIVQELD 2554 GVIDKAQF +YGLVHTV E YGS+ AG LLSV SRLFTVFLQ+ GFTCGVDDL+I++++D Sbjct: 812 GVIDKAQFADYGLVHTVHELYGSNAAGNLLSVFSRLFTVFLQLQGFTCGVDDLIILKDMD 871 Query: 2555 MERMKKLQRSDKIGEEQHAKFIG-AKEGDIDQMELQVEIEKAIRIKGESAITQLDRMMSS 2731 ER K+LQ +++GE K G A + ID +++ IE+ + GESA+ LDR + + Sbjct: 872 GERTKQLQECEQVGERVLRKTFGIAVDVQIDPQDMKSRIERILYEDGESALASLDRSVVN 931 Query: 2732 ELNDLTSV-VNSELFPKGLLKPFPKNCLSLMTTSGAKGSLVNFTQISSLLGQQQLEGKRV 2908 ELN +S V ++L GLLKP KNC+SLMT SGAKGS VNF QISS LGQQ LEGKRV Sbjct: 932 ELNQCSSKGVMNDLLSDGLLKPPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRV 991 Query: 2909 PRMVSGKTLPCFPPWDPASRAGGFITDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSG 3088 PRMVSGKTLPCF PWD + RAGGFI+DRFL+GLRPQEYYFHCMAGREGLVDTAVKTSRSG Sbjct: 992 PRMVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSG 1051 Query: 3089 YLQRCLVKSLECLKVCYDHTVRDADGSVVQFCYGEDGVDVHKTSFVTKFDTLAANQ-RVL 3265 YLQRCL+K+LE LKV YD TVRDADGS++QF YGEDGVDVH++SF+ KF L NQ +L Sbjct: 1052 YLQRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFRELTVNQDMIL 1111 Query: 3266 ERLGDHFEDAQMKSDDYIKELPEALEQKTKDFLSNLTKQQRHSLHLRKRKDFXXXXXXXX 3445 +R ED S YI +LP L+ + F+ + +R + L +++D Sbjct: 1112 QRCS---EDMLSGSSSYITDLPITLKNGAEKFVEAMPMNERIASKLVRQEDLLKLVKSKF 1168 Query: 3446 XXXXAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQ 3625 AQPGEPVGV+AAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM A+ I+ Sbjct: 1169 FASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAANIK 1228 Query: 3626 TPVMTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKL 3805 TP+MTCPLL GKT DDAK++ L+K++VADI++S+EVSV+P++V + +V SI+KLK+KL Sbjct: 1229 TPIMTCPLLKGKTTDDAKKITDKLRKIAVADIIKSMEVSVIPYAVHEGEVCSIHKLKIKL 1288 Query: 3806 YRPELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIV-LSAQSGSSK 3982 Y+PE YP +DIT ED +TM V+F+ +LE+ I+ H+ ML +I GIK+ SG+ Sbjct: 1289 YKPEHYPKHTDITDEDWKETMTVMFLRKLEDAIEIHVKMLVRIRGIKSEKDTRPTSGNET 1348 Query: 3983 DIDEGDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141 D D+ +G ++ LG DAQK+++QA D +DYE+ Sbjct: 1349 DNDDSVSGKHTED------DDDDDEGEGTEVDDLGADAQKQKKQAVDVVDYEE 1395 >gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus] Length = 1719 Score = 1438 bits (3723), Expect = 0.0 Identities = 781/1429 (54%), Positives = 969/1429 (67%), Gaps = 66/1429 (4%) Frame = +2 Query: 53 TTEGATESVEAVGFSFLTNEEVRTLSFKKITNPILLDNLGRPAPDGLYDPAMGPLEDRTL 232 +TE TE VEAV F F T+EE R S KITNP L+D LG+P P GLYDPAMG L++R++ Sbjct: 3 STECTTEVVEAVRFGFFTDEEARKHSLVKITNPNLVDILGKPCPGGLYDPAMGSLDERSI 62 Query: 233 CKSCGQRSFQCPGHCGHIDLVSPVYNPLLFRILFNLLQRTCFFCYHFRVNREQVKKCALQ 412 C+SCGQR++ C GHCGHI+LVS YNPLLF L N+L +TC +C F + E+ + Q Sbjct: 63 CESCGQRAYLCNGHCGHIELVSVAYNPLLFNTLSNILNKTCLYCLQFISSAEETENFVSQ 122 Query: 413 LELIIKGDIVGAKXXXXXXXXXXXXXXXXXRVHVKGLPRQVPNYNS-------------- 550 LELI KGD+ GAK R+ + Sbjct: 123 LELIRKGDLAGAKKLALGSSFKGKKKMVFVSTDDDTDEREDSQGSHMSHSAVLSDGENHF 182 Query: 551 KNLKQHSWTSLQYSEAMSLLDELMTGQKTECKRCGAKNPKITCPNFGWFHVNMPN--KYT 724 K+ +Q SW+S Q +EA+S+++E + + +C C + PKI+ P FGWF V K Sbjct: 183 KDDEQASWSSAQLAEAISVMNEYLRRKGKKCMNCEMRCPKISKPTFGWFQVGGATSAKAI 242 Query: 725 RANIIKGSKLNKLSMGKAKRNSTGEEENANDSSAMGDVDSTDAESSGVVYDGTPDS---- 892 R N+I+ KL++ + N + E NA D S D ++ ++ S + T S Sbjct: 243 RENVIRSHKLDESDSDGGEDNFSSEVVNAGDHSMNDDSETVESNSFIATSNSTKKSKKKG 302 Query: 893 ---AQKVKGGYLYPEFLKQKEFFSGPLLPSEVKNHMKLLWENETQLCSLICDIQQERLSI 1063 A+K+ G P F + SGPLLPS+V++ +KLLWE E CS I DIQ+++ Sbjct: 303 VNRAKKLNPGSGDPNF-----YLSGPLLPSQVRDILKLLWEKEASFCSYISDIQRQKCKP 357 Query: 1064 SGMKGNYSMFFIEALLVPPIKFRPPSKGGDSVMEHPQTVLLNKVMYSNISLCNEHMNSSE 1243 G K YSMFF+E +LVPPI+FRPP+KGGDSVMEHPQTVLL KV+ SNI+L N H+N+ E Sbjct: 358 FGNKTGYSMFFLETVLVPPIRFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNA-E 416 Query: 1244 RSKIVPRWFDLQQSINVLFGNSKTAGL-RENMATGICQLLEKKEGIFRQKMMGKRVNYAC 1420 +SKI+ RW +LQQSINV F + L +++ GICQ LEKKEGIFRQKMMGKRVN+AC Sbjct: 417 KSKIISRWMELQQSINVYFDSKTATSLAQKDSIAGICQFLEKKEGIFRQKMMGKRVNFAC 476 Query: 1421 RSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEVHPGATHYVDKL 1600 RSVISPDPYLAVNEIGIPPYFAL+LTYPERVTPWN KLR A++NG ++HPGAT YVD + Sbjct: 477 RSVISPDPYLAVNEIGIPPYFALKLTYPERVTPWNAAKLRGAVVNGPDIHPGATTYVDSV 536 Query: 1601 ATVKLPPNRKIRTSISRKLHSSRGVVAQPGKNLEHELEGKVVYRHLQDGDIVLVNRQPTL 1780 VKLPP++K+R +ISRKL SSRGVV Q GK + E EGK V+RHLQDGDIVLVNRQPTL Sbjct: 537 TIVKLPPSQKMRVAISRKLPSSRGVVTQSGKFDDLEFEGKTVHRHLQDGDIVLVNRQPTL 596 Query: 1781 HKPSIMAHVVRVLSGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANN 1960 HKPSIMAHVVRVL GE+TLRMHYANCS+YNADFDGDE+NVHFPQDEISRAEA+NIVNAN Sbjct: 597 HKPSIMAHVVRVLHGERTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANE 656 Query: 1961 QYILPTSGEPTRGLIQDHIVSAVLLTKKDTFLTWEEYNHLLYSSGVSAAARDFFSSKPGQ 2140 QYI+PT G+ RGLIQDHIV AVLLT K+TF+ E+N LLY SGV A+ + Sbjct: 657 QYIVPTKGDTVRGLIQDHIVGAVLLTMKNTFVNRSEFNQLLYGSGVFASGPGSLPKNNSR 716 Query: 2141 KVSVINSEAEIEPILPAILKPVPMWTGKQVITSLLNHISRTRGFEPLTVEKSGKIKKEYF 2320 KV++I++E +E +LPAI KP P+WTGKQVIT+LLNHI TRG P TVE GKI K YF Sbjct: 717 KVTLIDTEGVVESVLPAIWKPEPLWTGKQVITALLNHI--TRGCAPFTVENQGKIPKNYF 774 Query: 2321 -------GRKSD----EANLLIQKNELVHGVIDKAQFGEYGLVHTVQEFYGSDTAGILLS 2467 G + + E NLL+ KNELV GVIDKAQFG++GLVHTVQE YG+ +AGI LS Sbjct: 775 FGNSYTRGEEDEDQNAEHNLLVWKNELVRGVIDKAQFGKFGLVHTVQELYGASSAGIFLS 834 Query: 2468 VLSRLFTVFLQMHGFTCGVDDLLIVQELDMERMKKLQRSDKIGEEQHAKFIGAKEGDIDQ 2647 LSR+FT+FLQ+HGFTCGVDDL+I+ + D +R +KL+ D +GE H F+ K G I Sbjct: 835 ALSRVFTLFLQIHGFTCGVDDLIILPDYDDQRKEKLEGED-VGEVVHCDFVKFKPGQIGP 893 Query: 2648 MELQVEIEKAIRIKGESAITQLDRMMSSELND-LT---SVVNSELFPKGLLKPFPKNCLS 2815 ELQ+EIEK I ESA LD M ++LN LT S + L GLLKPFPKNC+S Sbjct: 894 DELQLEIEKVICTDRESATASLDMKMKNKLNSKLTREGSQILKHLLTAGLLKPFPKNCIS 953 Query: 2816 LMTTSGAKGSLVNFTQISSLLGQQQLEGKRVPRMVSGKTLPCFPPWDPASRAGGFITDRF 2995 +MTT+GAKGS VNF QIS+ LGQQ+LEGKRVPRMVSGKTLP FPPWD SRAGGFITDRF Sbjct: 954 VMTTTGAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRF 1013 Query: 2996 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKSLECLKVCYDHTVRDADGSVV 3175 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVK+LE LKVCYD+TVRDADGS+V Sbjct: 1014 LTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLESLKVCYDYTVRDADGSIV 1073 Query: 3176 QFCYGEDGVDVHKTSFVTKFDTLAANQRVLERLGDHFEDAQMKSDDYIKELPEALEQKTK 3355 QF YGEDG+DVH+TSF+ F L N+ + + H + + + YIK+LPE LE++ K Sbjct: 1074 QFYYGEDGIDVHRTSFLNNFKALQDNRETICQKFQH----KREFNSYIKKLPEGLEEEAK 1129 Query: 3356 DFL-----SNLTKQQR------HSLHLRKRKD----------------FXXXXXXXXXXX 3454 F+ +L KQ HS ++K+ F Sbjct: 1130 RFIQETQNKSLAKQSTSAGEGPHSSRKARKKEKLLKKEKAAAAYEQDAFLELVKQKYLSS 1189 Query: 3455 XAQPGEPVGVIAAQSVGQPSTQMTLNTFHHAGLGAMNVTLGIPRLQEILMRASETIQTPV 3634 AQ GEPVGVIAAQSVG+PSTQMTLNTFH AG G MNVTLGIPRLQEILM ASE I+TP+ Sbjct: 1190 LAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMSASEVIKTPL 1249 Query: 3635 MTCPLLMGKTWDDAKRLAATLKKVSVADIVESIEVSVVPFSVKKHQVSSIYKLKMKLYRP 3814 +TCP ++ + L + +KKVSVAD++E++EV + SV + +YKLKM L Sbjct: 1250 LTCPFSQWRSKREVVSLVSHVKKVSVADLIENMEVQL---SVNHKTAARVYKLKMTLKDT 1306 Query: 3815 ELYPPFSDITLEDCLKTMEVLFVGELEEEIQAHLIMLSKISGIKNIVLSAQSGSSKDIDE 3994 E ++LE+ +T++ F+GELE+ I+ H++ LS++SGIKN + + SS + DE Sbjct: 1307 EF------VSLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADE 1360 Query: 3995 GDTGSKSQQVXXXXXXXXXXXXXXXXXXXLGVDAQKRRRQATDEMDYED 4141 ++G ++ LG D QKR++QATD+MDYED Sbjct: 1361 DESGLGTENA---GVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYED 1406