BLASTX nr result
ID: Akebia23_contig00003416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00003416
(1060 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB67890.1| Diaminopimelate epimerase [Morus notabilis] 446 e-122
ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloro... 438 e-120
ref|XP_007027115.1| Diaminopimelate epimerase family protein iso... 434 e-119
ref|XP_007027116.1| Diaminopimelate epimerase family protein iso... 430 e-119
ref|XP_006480734.1| PREDICTED: diaminopimelate epimerase, chloro... 431 e-118
ref|XP_006429008.1| hypothetical protein CICLE_v10012025mg [Citr... 430 e-118
ref|XP_007205407.1| hypothetical protein PRUPE_ppa007581mg [Prun... 429 e-118
ref|XP_006345660.1| PREDICTED: diaminopimelate epimerase, chloro... 428 e-117
ref|XP_004302726.1| PREDICTED: diaminopimelate epimerase, chloro... 427 e-117
emb|CBI32677.3| unnamed protein product [Vitis vinifera] 426 e-116
ref|XP_004246745.1| PREDICTED: diaminopimelate epimerase, chloro... 424 e-116
gb|EYU28264.1| hypothetical protein MIMGU_mgv1a008687mg [Mimulus... 420 e-115
ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus... 419 e-114
ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloro... 414 e-113
ref|XP_006410926.1| hypothetical protein EUTSA_v10016845mg [Eutr... 409 e-111
ref|XP_002308231.2| hypothetical protein POPTR_0006s10360g [Popu... 408 e-111
ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana... 408 e-111
ref|XP_006374003.1| hypothetical protein POPTR_0016s12850g [Popu... 405 e-110
ref|XP_002876213.1| diaminopimelate epimerase family protein [Ar... 405 e-110
pdb|3EJX|A Chain A, Crystal Structure Of Diaminopimelate Epimera... 405 e-110
>gb|EXB67890.1| Diaminopimelate epimerase [Morus notabilis]
Length = 359
Score = 446 bits (1146), Expect = e-122
Identities = 212/258 (82%), Positives = 237/258 (91%), Gaps = 2/258 (0%)
Frame = +1
Query: 253 SSLRNPSSRILASS--MNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSL 426
SS +PS R++ASS M + A EK SFLD++ESGFLHFVKYHGLGNDFILVDNRDS
Sbjct: 37 SSSTSPSFRVIASSSSMTLGAVEKASPVSFLDRRESGFLHFVKYHGLGNDFILVDNRDSS 96
Query: 427 EPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFAR 606
EP+VTP+QAVKLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRCFAR
Sbjct: 97 EPRVTPEQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFAR 156
Query: 607 FIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVV 786
FIAELENL+GKQSFTVHTGAGLIVPEIQDDGQV+VDMG+PIL ASDVPT+LPA++DQ+VV
Sbjct: 157 FIAELENLQGKQSFTVHTGAGLIVPEIQDDGQVKVDMGEPILRASDVPTRLPANKDQSVV 216
Query: 787 KVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNT 966
K L VDG+TWNVTCVSMGNPHCVTF TK + LQVD+LNL+EIGP+FEHH+VFPARTNT
Sbjct: 217 KSELHVDGITWNVTCVSMGNPHCVTFGTKDAQNLQVDELNLAEIGPKFEHHEVFPARTNT 276
Query: 967 EFVQVFSPSHLKMRVWER 1020
EFVQVFSPSH+KMRVWER
Sbjct: 277 EFVQVFSPSHVKMRVWER 294
>ref|XP_002278566.1| PREDICTED: diaminopimelate epimerase, chloroplastic [Vitis vinifera]
Length = 370
Score = 438 bits (1127), Expect = e-120
Identities = 209/255 (81%), Positives = 234/255 (91%)
Frame = +1
Query: 256 SLRNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPK 435
+ RNP+ R+ A+SM+IEA EK + SFLD+KESGFLHFVKYHGLGNDFILVDNRDS EPK
Sbjct: 51 AFRNPNFRVSATSMSIEALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPK 110
Query: 436 VTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 615
+TP+QAVKLCDRNFG+GADGVIFAMPGINGTDY+MRIFNSDGSEPEMCGNGVRCFARFIA
Sbjct: 111 LTPEQAVKLCDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIA 170
Query: 616 ELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVG 795
ELENL GKQSFT+HTGAGLIVPEIQDDG+V+VDMG+PIL A DVPTKLPA++DQ+VVK
Sbjct: 171 ELENLHGKQSFTLHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSE 230
Query: 796 LEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFV 975
L VDGV+WNVTCVSMGNPHCVTF TK + LQVD+LNL++IGP+FEHH +FPARTNTEFV
Sbjct: 231 LNVDGVSWNVTCVSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFV 290
Query: 976 QVFSPSHLKMRVWER 1020
QV S SHLKMRVWER
Sbjct: 291 QVISRSHLKMRVWER 305
>ref|XP_007027115.1| Diaminopimelate epimerase family protein isoform 1 [Theobroma cacao]
gi|508715720|gb|EOY07617.1| Diaminopimelate epimerase
family protein isoform 1 [Theobroma cacao]
Length = 361
Score = 434 bits (1117), Expect = e-119
Identities = 206/258 (79%), Positives = 232/258 (89%)
Frame = +1
Query: 247 SGSSLRNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSL 426
S SL+NPS R+ ASSM+I P+K SFLD++ESGF+HFVKYHGLGNDFILVDNRDS
Sbjct: 39 SNLSLKNPSFRVSASSMSIGTPDKISTTSFLDRRESGFVHFVKYHGLGNDFILVDNRDST 98
Query: 427 EPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFAR 606
EP++TP+QAVKLCDRNFGVGADGVIFAMPG NGTDY+MRIFNSDGSEPEMCGNGVRCFAR
Sbjct: 99 EPRITPEQAVKLCDRNFGVGADGVIFAMPGTNGTDYTMRIFNSDGSEPEMCGNGVRCFAR 158
Query: 607 FIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVV 786
FIAELENL GKQSFTV+TGAGLIVPEIQDDG+V+VDMG+PIL ASDVPTKL A++DQ+VV
Sbjct: 159 FIAELENLHGKQSFTVYTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTKLRANKDQSVV 218
Query: 787 KVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNT 966
K L VDGV WNVTCVSMGNPHCVTF TK + L VD+LNL+ +GP+FEHH++FPARTNT
Sbjct: 219 KSDLNVDGVIWNVTCVSMGNPHCVTFGTKGSQNLTVDELNLAAVGPKFEHHEMFPARTNT 278
Query: 967 EFVQVFSPSHLKMRVWER 1020
EFV+VFS SHLKMRVWER
Sbjct: 279 EFVEVFSSSHLKMRVWER 296
>ref|XP_007027116.1| Diaminopimelate epimerase family protein isoform 2 [Theobroma cacao]
gi|508715721|gb|EOY07618.1| Diaminopimelate epimerase
family protein isoform 2 [Theobroma cacao]
Length = 348
Score = 430 bits (1105), Expect(2) = e-119
Identities = 206/259 (79%), Positives = 232/259 (89%), Gaps = 1/259 (0%)
Frame = +1
Query: 247 SGSSLRNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSL 426
S SL+NPS R+ ASSM+I P+K SFLD++ESGF+HFVKYHGLGNDFILVDNRDS
Sbjct: 39 SNLSLKNPSFRVSASSMSIGTPDKISTTSFLDRRESGFVHFVKYHGLGNDFILVDNRDST 98
Query: 427 EPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFAR 606
EP++TP+QAVKLCDRNFGVGADGVIFAMPG NGTDY+MRIFNSDGSEPEMCGNGVRCFAR
Sbjct: 99 EPRITPEQAVKLCDRNFGVGADGVIFAMPGTNGTDYTMRIFNSDGSEPEMCGNGVRCFAR 158
Query: 607 FIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVV 786
FIAELENL GKQSFTV+TGAGLIVPEIQDDG+V+VDMG+PIL ASDVPTKL A++DQ+VV
Sbjct: 159 FIAELENLHGKQSFTVYTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTKLRANKDQSVV 218
Query: 787 KVGLEVDGVTWNVTCVSMGNPHCVTFSTK-QCETLQVDDLNLSEIGPQFEHHQVFPARTN 963
K L VDGV WNVTCVSMGNPHCVTF TK + L VD+LNL+ +GP+FEHH++FPARTN
Sbjct: 219 KSDLNVDGVIWNVTCVSMGNPHCVTFGTKGSQQNLTVDELNLAAVGPKFEHHEMFPARTN 278
Query: 964 TEFVQVFSPSHLKMRVWER 1020
TEFV+VFS SHLKMRVWER
Sbjct: 279 TEFVEVFSSSHLKMRVWER 297
Score = 25.8 bits (55), Expect(2) = e-119
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 1029 SNTSLWNWSL 1058
SNT LWNWSL
Sbjct: 301 SNTGLWNWSL 310
>ref|XP_006480734.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Citrus
sinensis]
Length = 364
Score = 431 bits (1108), Expect = e-118
Identities = 205/261 (78%), Positives = 233/261 (89%), Gaps = 1/261 (0%)
Frame = +1
Query: 241 FRSGSSLRNPSSRILASSMN-IEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNR 417
F S +L+ PS R+ ASSM+ I APE + SFLD++ESGFLHFVKYHGLGNDFILVDNR
Sbjct: 38 FSSNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNR 97
Query: 418 DSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRC 597
+S EP++TP+QA KLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRC
Sbjct: 98 NSTEPRITPEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRC 157
Query: 598 FARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQ 777
FARFIAELENL GKQSFTVHTGAGLIVPEIQDDG+V+VDMG+PIL ASDVPT L A++DQ
Sbjct: 158 FARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQ 217
Query: 778 AVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPAR 957
+VVK L+VDGV WNVTCVSMGNPHCVTF TK+ + L+VD LNL+EIGP+FEHH VFPAR
Sbjct: 218 SVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPAR 277
Query: 958 TNTEFVQVFSPSHLKMRVWER 1020
TNTEFV++ SPS LKMRVWER
Sbjct: 278 TNTEFVEIISPSQLKMRVWER 298
>ref|XP_006429008.1| hypothetical protein CICLE_v10012025mg [Citrus clementina]
gi|557531065|gb|ESR42248.1| hypothetical protein
CICLE_v10012025mg [Citrus clementina]
Length = 364
Score = 430 bits (1106), Expect = e-118
Identities = 205/261 (78%), Positives = 233/261 (89%), Gaps = 1/261 (0%)
Frame = +1
Query: 241 FRSGSSLRNPSSRILASSMN-IEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNR 417
F S +L+ PS R+ ASSM+ I APE + SFLD++ESGFLHFVKYHGLGNDFILVDNR
Sbjct: 38 FSSNLTLKVPSFRVSASSMSSIHAPESASRTSFLDRRESGFLHFVKYHGLGNDFILVDNR 97
Query: 418 DSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRC 597
+S EP++TP+QA KLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRC
Sbjct: 98 NSTEPRITPEQAEKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRC 157
Query: 598 FARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQ 777
FARFIAELENL GKQSFTVHTGAGLIVPEIQDDG+V+VDMG+PIL ASDVPT L A++DQ
Sbjct: 158 FARFIAELENLNGKQSFTVHTGAGLIVPEIQDDGKVKVDMGEPILKASDVPTSLSANKDQ 217
Query: 778 AVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPAR 957
+VVK L+VDGV WNVTCVSMGNPHCVTF TK+ + L+VD LNL+EIGP+FEHH VFPAR
Sbjct: 218 SVVKSELDVDGVKWNVTCVSMGNPHCVTFGTKEGQNLKVDKLNLAEIGPKFEHHSVFPAR 277
Query: 958 TNTEFVQVFSPSHLKMRVWER 1020
TNTEFV++ SPS LKMRVWER
Sbjct: 278 TNTEFVEIISPSQLKMRVWER 298
>ref|XP_007205407.1| hypothetical protein PRUPE_ppa007581mg [Prunus persica]
gi|462401049|gb|EMJ06606.1| hypothetical protein
PRUPE_ppa007581mg [Prunus persica]
Length = 363
Score = 429 bits (1104), Expect = e-118
Identities = 207/266 (77%), Positives = 235/266 (88%), Gaps = 2/266 (0%)
Frame = +1
Query: 229 QLKLFRSGSSLRNPSSRILA--SSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFI 402
+L R SLR R+ A SSM++EA EK ASFLD++E+GFLHFVKYHGLGNDFI
Sbjct: 33 KLNSVRGSVSLRTACLRVSAASSSMSVEAVEKASPASFLDRRETGFLHFVKYHGLGNDFI 92
Query: 403 LVDNRDSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCG 582
LVDNRDS EPK+TP+QA KLCDRNFG+GADGVIFA+PGINGTDY+MRI+NSDGSEPEMCG
Sbjct: 93 LVDNRDSSEPKITPEQAAKLCDRNFGIGADGVIFALPGINGTDYTMRIYNSDGSEPEMCG 152
Query: 583 NGVRCFARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLP 762
NGVRCFARFIAELENL GKQ FTVHTGAGLIVPEIQDDG+V+VDMG+PIL A+DVPT LP
Sbjct: 153 NGVRCFARFIAELENLHGKQRFTVHTGAGLIVPEIQDDGKVKVDMGEPILKATDVPTGLP 212
Query: 763 ASRDQAVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQ 942
A+++Q+VVK L+VDGVTWNVTCVSMGNPHCVTF TK + LQVD+L L+EIGP+FE+H
Sbjct: 213 ANKNQSVVKSDLDVDGVTWNVTCVSMGNPHCVTFGTKGGQNLQVDELKLAEIGPKFENHV 272
Query: 943 VFPARTNTEFVQVFSPSHLKMRVWER 1020
VFPARTNTEFVQVF+PSHLKMRVWER
Sbjct: 273 VFPARTNTEFVQVFTPSHLKMRVWER 298
>ref|XP_006345660.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Solanum
tuberosum]
Length = 363
Score = 428 bits (1100), Expect = e-117
Identities = 202/257 (78%), Positives = 232/257 (90%), Gaps = 1/257 (0%)
Frame = +1
Query: 253 SSLRNPSSRILA-SSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLE 429
++++ PS RI A SSM IE PE + ASFLD+KES F+HFVKYHGLGNDFILVDNRD+ E
Sbjct: 43 AAIQCPSFRISAVSSMKIEVPENSSSASFLDRKESDFVHFVKYHGLGNDFILVDNRDTTE 102
Query: 430 PKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARF 609
PKV+PDQAVKLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNG+RC A+F
Sbjct: 103 PKVSPDQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGIRCLAKF 162
Query: 610 IAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVK 789
IAELEN GK+SFT+HTGAGLIVPEIQDDG+VRVDMG+PIL A+DVPTKL +RDQ+VVK
Sbjct: 163 IAELENFHGKKSFTIHTGAGLIVPEIQDDGKVRVDMGEPILKAADVPTKLLPNRDQSVVK 222
Query: 790 VGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTE 969
L+VDG TWNVTCVSMGNPHCVTF T Q + LQVD+L L++IGP+FEHH++FPARTNTE
Sbjct: 223 SSLDVDGSTWNVTCVSMGNPHCVTFGTAQSQELQVDELKLADIGPKFEHHEMFPARTNTE 282
Query: 970 FVQVFSPSHLKMRVWER 1020
FVQVFSP+HLKMRVWER
Sbjct: 283 FVQVFSPTHLKMRVWER 299
>ref|XP_004302726.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 362
Score = 427 bits (1099), Expect = e-117
Identities = 202/245 (82%), Positives = 223/245 (91%)
Frame = +1
Query: 286 ASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPDQAVKLC 465
ASSM + A EK ASFLD+KE+G LHFVKYHGLGNDFILVDNRDS EPKVTP+QAV+LC
Sbjct: 53 ASSMTVGAAEKASPASFLDRKEAGILHFVKYHGLGNDFILVDNRDSSEPKVTPEQAVRLC 112
Query: 466 DRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLRGKQS 645
DRNFG+GADGVIFA+PGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFI ELENL G Q
Sbjct: 113 DRNFGIGADGVIFALPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFITELENLHGNQR 172
Query: 646 FTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVGLEVDGVTWNV 825
FTVHTGAGLIVP+I DDGQVRVDMG+PIL ASDVPTKL ++D +VVK GL+VDGVTWNV
Sbjct: 173 FTVHTGAGLIVPKIVDDGQVRVDMGEPILKASDVPTKLAPNKDHSVVKAGLDVDGVTWNV 232
Query: 826 TCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFVQVFSPSHLKM 1005
TCVSMGNPHC+TF T+ + LQVD+LNL+EIGP+FEHH+VFPARTNTEFVQVFSPSH+KM
Sbjct: 233 TCVSMGNPHCITFGTEGGQDLQVDELNLAEIGPKFEHHEVFPARTNTEFVQVFSPSHVKM 292
Query: 1006 RVWER 1020
RVWER
Sbjct: 293 RVWER 297
>emb|CBI32677.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 426 bits (1094), Expect = e-116
Identities = 203/242 (83%), Positives = 224/242 (92%)
Frame = +1
Query: 295 MNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPDQAVKLCDRN 474
M+IEA EK + SFLD+KESGFLHFVKYHGLGNDFILVDNRDS EPK+TP+QAVKLCDRN
Sbjct: 1 MSIEALEKGSQTSFLDRKESGFLHFVKYHGLGNDFILVDNRDSSEPKLTPEQAVKLCDRN 60
Query: 475 FGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLRGKQSFTV 654
FG+GADGVIFAMPGINGTDY+MRIFNSDGSEPEMCGNGVRCFARFIAELENL GKQSFT+
Sbjct: 61 FGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLHGKQSFTL 120
Query: 655 HTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVGLEVDGVTWNVTCV 834
HTGAGLIVPEIQDDG+V+VDMG+PIL A DVPTKLPA++DQ+VVK L VDGV+WNVTCV
Sbjct: 121 HTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPANKDQSVVKSELNVDGVSWNVTCV 180
Query: 835 SMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFVQVFSPSHLKMRVW 1014
SMGNPHCVTF TK + LQVD+LNL++IGP+FEHH +FPARTNTEFVQV S SHLKMRVW
Sbjct: 181 SMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAMFPARTNTEFVQVISRSHLKMRVW 240
Query: 1015 ER 1020
ER
Sbjct: 241 ER 242
>ref|XP_004246745.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Solanum
lycopersicum]
Length = 363
Score = 424 bits (1089), Expect = e-116
Identities = 201/256 (78%), Positives = 231/256 (90%), Gaps = 1/256 (0%)
Frame = +1
Query: 256 SLRNPSSRILA-SSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEP 432
+++ PS R+ A SSM IE PE + ASFLD+KES F+ FVKYHGLGNDFILVDNRD+ EP
Sbjct: 44 AIQCPSFRVSAVSSMKIEVPENSSSASFLDRKESDFVRFVKYHGLGNDFILVDNRDTTEP 103
Query: 433 KVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 612
KV+PDQAVKLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNG+RC A+FI
Sbjct: 104 KVSPDQAVKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGIRCLAKFI 163
Query: 613 AELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKV 792
AELEN GK+SFT+HTGAGLIVPEIQDDG+VRVDMG+PIL A+DVPTKLP +RDQ+VVK
Sbjct: 164 AELENFHGKKSFTIHTGAGLIVPEIQDDGKVRVDMGEPILKAADVPTKLPPNRDQSVVKS 223
Query: 793 GLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEF 972
L+VDG TWNVTCVSMGNPHCVTF T Q + LQVD+L L++IGP+FEHH++FPARTNTEF
Sbjct: 224 SLDVDGSTWNVTCVSMGNPHCVTFGTAQ-QDLQVDELKLADIGPKFEHHEMFPARTNTEF 282
Query: 973 VQVFSPSHLKMRVWER 1020
VQVFSP+HLKMRVWER
Sbjct: 283 VQVFSPTHLKMRVWER 298
>gb|EYU28264.1| hypothetical protein MIMGU_mgv1a008687mg [Mimulus guttatus]
Length = 365
Score = 420 bits (1080), Expect = e-115
Identities = 199/253 (78%), Positives = 226/253 (89%)
Frame = +1
Query: 262 RNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPKVT 441
R P+ R+ SS++ +APEK SF D+ ESG LHFVKYHGLGNDFILVDNRDS EPK+T
Sbjct: 49 RKPNFRV-CSSISTQAPEKISATSFGDRTESGILHFVKYHGLGNDFILVDNRDSEEPKIT 107
Query: 442 PDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 621
P+QAVKLCDRNFG+GADGVIFA+PGINGTD++MRIFNSDGSEPEMCGNGVRCFAR+IAEL
Sbjct: 108 PEQAVKLCDRNFGIGADGVIFALPGINGTDFTMRIFNSDGSEPEMCGNGVRCFARYIAEL 167
Query: 622 ENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVGLE 801
ENL GK+SFTVHTGAGLIVPE+QD+G+VRVDMG+PIL ASDVPTKL ++DQ+ VK L+
Sbjct: 168 ENLHGKKSFTVHTGAGLIVPELQDNGKVRVDMGEPILKASDVPTKLAPNKDQSAVKAKLD 227
Query: 802 VDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFVQV 981
VDG WN TCVSMGNPHCV FS++ CE LQVD+LNLSEIGP+FEHH +FPARTNTEFVQV
Sbjct: 228 VDGSIWNATCVSMGNPHCVIFSSESCEDLQVDELNLSEIGPKFEHHLMFPARTNTEFVQV 287
Query: 982 FSPSHLKMRVWER 1020
FSPSHLKMRVWER
Sbjct: 288 FSPSHLKMRVWER 300
>ref|XP_002533003.1| Diaminopimelate epimerase, putative [Ricinus communis]
gi|223527214|gb|EEF29378.1| Diaminopimelate epimerase,
putative [Ricinus communis]
Length = 369
Score = 419 bits (1077), Expect = e-114
Identities = 201/258 (77%), Positives = 228/258 (88%), Gaps = 3/258 (1%)
Frame = +1
Query: 256 SLRNPSSRIL---ASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSL 426
S +NP+ R+L A+SM+ EAPEK ASFLD++ESG HFVKY GLGNDFILVDNRDS
Sbjct: 47 SSKNPNFRLLLVSAASMSAEAPEKISTASFLDRRESGIHHFVKYQGLGNDFILVDNRDST 106
Query: 427 EPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFAR 606
EP++TP+QAV+LCDRNFG+GADGVIFAMPG NGTDYSMRIFNSDGSEPEMCGNGVRCFAR
Sbjct: 107 EPRITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFAR 166
Query: 607 FIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVV 786
FIAELENL+GKQSFT+HTGAGLIVPEIQ+DG+V+VDMG+PIL ASDVPT+L ++ AVV
Sbjct: 167 FIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLRENKGDAVV 226
Query: 787 KVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNT 966
K L +DGVTWNVTCVSMGNPHCVTF + + + LQVD LNL+EIGP+FEHH VFPARTNT
Sbjct: 227 KAKLNIDGVTWNVTCVSMGNPHCVTFGSNENQDLQVDKLNLAEIGPKFEHHDVFPARTNT 286
Query: 967 EFVQVFSPSHLKMRVWER 1020
EFVQV S SHLKMRVWER
Sbjct: 287 EFVQVHSHSHLKMRVWER 304
>ref|XP_004142088.1| PREDICTED: diaminopimelate epimerase, chloroplastic-like [Cucumis
sativus]
Length = 364
Score = 414 bits (1063), Expect = e-113
Identities = 192/253 (75%), Positives = 223/253 (88%)
Frame = +1
Query: 262 RNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPKVT 441
R+P + A+S +E EK SFLD++ESG LHFVKYHGLGNDFILVDNRDS EP++T
Sbjct: 46 RSPRLSVSATSAGLEVTEKAPSFSFLDRRESGLLHFVKYHGLGNDFILVDNRDSSEPRIT 105
Query: 442 PDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 621
P+QA KLCDRNFG+GADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRCFARFIAEL
Sbjct: 106 PEQAAKLCDRNFGIGADGVIFAMPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAEL 165
Query: 622 ENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVGLE 801
ENL+G+ SFTVHTGAGLI+PE+QDDGQV+VDMG+PIL A+DVPT+L ++DQ+VVK +E
Sbjct: 166 ENLQGRHSFTVHTGAGLIIPELQDDGQVKVDMGEPILKATDVPTRLTPTKDQSVVKAAIE 225
Query: 802 VDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFVQV 981
VDGV W+VTCVSMGNPHCVTFS K + LQVD +NL+ IGP+FEHH++FPARTNTEFVQV
Sbjct: 226 VDGVAWSVTCVSMGNPHCVTFSNKIEQNLQVDGINLAAIGPKFEHHEMFPARTNTEFVQV 285
Query: 982 FSPSHLKMRVWER 1020
S SHLKMRVWER
Sbjct: 286 LSNSHLKMRVWER 298
>ref|XP_006410926.1| hypothetical protein EUTSA_v10016845mg [Eutrema salsugineum]
gi|557112095|gb|ESQ52379.1| hypothetical protein
EUTSA_v10016845mg [Eutrema salsugineum]
Length = 363
Score = 409 bits (1050), Expect = e-111
Identities = 194/264 (73%), Positives = 225/264 (85%)
Frame = +1
Query: 229 QLKLFRSGSSLRNPSSRILASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILV 408
+ L R S +P+ R+ A S++ A +K SFLD++ESG LHFVKYHGLGNDFILV
Sbjct: 33 RFNLSRRNFSAGSPTLRVSAGSISAFAADKISPESFLDKRESGVLHFVKYHGLGNDFILV 92
Query: 409 DNRDSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNG 588
DNRDS EPK+T +QAVKLCDRNFGVGADGVIFAMPGINGTDY+MRIFNSDGSEPEMCGNG
Sbjct: 93 DNRDSSEPKITQEQAVKLCDRNFGVGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGNG 152
Query: 589 VRCFARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPAS 768
VRCFARFIAE+ENL+GK SFT+HTGAGLI+PEIQDDGQV+VDMG+PIL A DVPT+L +
Sbjct: 153 VRCFARFIAEIENLQGKHSFTIHTGAGLIIPEIQDDGQVKVDMGEPILRAEDVPTRLAGN 212
Query: 769 RDQAVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVF 948
+ ++VV L VDGV+WNVTCVSMGNPHC+TF T + L+VDDL LSEIGP+FEHH++F
Sbjct: 213 KGESVVAAELVVDGVSWNVTCVSMGNPHCITFGTTGGQNLRVDDLKLSEIGPKFEHHEMF 272
Query: 949 PARTNTEFVQVFSPSHLKMRVWER 1020
PARTNTEFV+V S SHLKMRVWER
Sbjct: 273 PARTNTEFVEVLSRSHLKMRVWER 296
>ref|XP_002308231.2| hypothetical protein POPTR_0006s10360g [Populus trichocarpa]
gi|550335915|gb|EEE91754.2| hypothetical protein
POPTR_0006s10360g [Populus trichocarpa]
Length = 366
Score = 408 bits (1049), Expect = e-111
Identities = 202/265 (76%), Positives = 234/265 (88%), Gaps = 9/265 (3%)
Frame = +1
Query: 253 SSLRNPSSR--ILASSMNIE---APEKTLK--ASFLDQKE-SGFLHFVKYHGLGNDFILV 408
+SL+NP R +++SSM+I+ AP++T +SFLD KE S FLHFVKYHGLGNDFI++
Sbjct: 37 NSLKNPKFRPLVVSSSMSIDSAAAPQETSSKSSSFLDHKEGSRFLHFVKYHGLGNDFIVL 96
Query: 409 DNRDSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNG 588
DNRDS EPK+ P+QAVKLCDRNFG+GADGVIFA+PG+NGTDY+MRIFNSDGSEPEMCGNG
Sbjct: 97 DNRDSSEPKIRPEQAVKLCDRNFGIGADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGNG 156
Query: 589 VRCFARFIAELENLRGK-QSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPA 765
VRCFARFIAELEN GK QSFTVHTGAGLIVPEIQ+DGQV+VDMG+P+L A++VPTKL +
Sbjct: 157 VRCFARFIAELENFHGKRQSFTVHTGAGLIVPEIQEDGQVKVDMGEPVLKAANVPTKLAS 216
Query: 766 SRDQAVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQV 945
+++ AVVK L VDGVTWNVTCVSMGNPHCVTF TK E LQVD LNL++IGP+FEHH V
Sbjct: 217 NKNDAVVKSELVVDGVTWNVTCVSMGNPHCVTFGTKGGEDLQVDALNLAQIGPKFEHHDV 276
Query: 946 FPARTNTEFVQVFSPSHLKMRVWER 1020
FPARTNTEFVQV+SPSHLKMRVWER
Sbjct: 277 FPARTNTEFVQVYSPSHLKMRVWER 301
>ref|NP_190926.1| diaminopimelate epimerase [Arabidopsis thaliana]
gi|75263858|sp|Q9LFG2.1|DAPF_ARATH RecName:
Full=Diaminopimelate epimerase, chloroplastic; Short=DAP
epimerase; Flags: Precursor gi|6729509|emb|CAB67665.1|
diaminopimelate epimerase-like protein [Arabidopsis
thaliana] gi|22022530|gb|AAM83223.1| AT3g53580/F4P12_280
[Arabidopsis thaliana] gi|23505901|gb|AAN28810.1|
At3g53580/F4P12_280 [Arabidopsis thaliana]
gi|332645592|gb|AEE79113.1| diaminopimelate epimerase
[Arabidopsis thaliana]
Length = 362
Score = 408 bits (1049), Expect = e-111
Identities = 197/261 (75%), Positives = 222/261 (85%), Gaps = 1/261 (0%)
Frame = +1
Query: 241 FRSGSSLRNPSSRI-LASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNR 417
F ++PS R+ A+SM+ EK ASFLD+KE+G LHFVKYHGLGNDFILVDNR
Sbjct: 37 FEKEYCFKSPSLRVSAAASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNR 96
Query: 418 DSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRC 597
DS EPK+T +QA KLCDRNFGVGADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRC
Sbjct: 97 DSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRC 156
Query: 598 FARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQ 777
FARFIAELENL+GK SFT+HTGAGLIVPEIQDDGQV+VDMG PIL A DVPTKL ++ +
Sbjct: 157 FARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGE 216
Query: 778 AVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPAR 957
AVV+ L VDGV+WNVTCVSMGNPHC+TF K L+VDDLNL EIGP+FEHH++FPAR
Sbjct: 217 AVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPAR 276
Query: 958 TNTEFVQVFSPSHLKMRVWER 1020
TNTEFV+V S SHLKMRVWER
Sbjct: 277 TNTEFVEVLSRSHLKMRVWER 297
>ref|XP_006374003.1| hypothetical protein POPTR_0016s12850g [Populus trichocarpa]
gi|550321383|gb|ERP51800.1| hypothetical protein
POPTR_0016s12850g [Populus trichocarpa]
Length = 368
Score = 405 bits (1042), Expect = e-110
Identities = 199/262 (75%), Positives = 232/262 (88%), Gaps = 6/262 (2%)
Frame = +1
Query: 253 SSLRNPSSR-ILASSMNIEAP---EKTLKASFLDQKE-SGFLHFVKYHGLGNDFILVDNR 417
+SL+NP+ R ++ SS +IE+ + + K SFLDQ+E S +LHFVKYHGLGNDFILVDNR
Sbjct: 37 NSLKNPNFRPLVVSSTSIESAATQKPSSKTSFLDQREGSRYLHFVKYHGLGNDFILVDNR 96
Query: 418 DSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRC 597
DS EPK+TP+QA KLCDRNFG+GADGVIFA+PGINGTDY+MRIFNSDGSEPEMCGNGVRC
Sbjct: 97 DSSEPKITPEQAAKLCDRNFGIGADGVIFALPGINGTDYTMRIFNSDGSEPEMCGNGVRC 156
Query: 598 FARFIAELENLRGKQ-SFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRD 774
FARFIAE+ENL GK+ SF+VHTGAGLIVPEIQ+DG+V+VDMG+P+L A+DVPTKL A+++
Sbjct: 157 FARFIAEIENLHGKKLSFSVHTGAGLIVPEIQEDGKVKVDMGEPVLKAADVPTKLAANKN 216
Query: 775 QAVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPA 954
AVVK L VDGVTWNVTCVSMGNPHCVTF K + LQVD LNL++IGP+FEHH+VFPA
Sbjct: 217 DAVVKSELVVDGVTWNVTCVSMGNPHCVTFGVKGGQDLQVDSLNLAQIGPKFEHHEVFPA 276
Query: 955 RTNTEFVQVFSPSHLKMRVWER 1020
RTNTEFVQV SPSHLKMRVWER
Sbjct: 277 RTNTEFVQVCSPSHLKMRVWER 298
>ref|XP_002876213.1| diaminopimelate epimerase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297322051|gb|EFH52472.1| diaminopimelate
epimerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 405 bits (1042), Expect = e-110
Identities = 196/261 (75%), Positives = 221/261 (84%), Gaps = 1/261 (0%)
Frame = +1
Query: 241 FRSGSSLRNPSSRI-LASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNR 417
F ++PS R+ A+SM+ EK ASFLD+KE+G LHFVKYHGLGNDFILVDNR
Sbjct: 37 FEKEYCFKSPSLRVSAAASMDAVIAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNR 96
Query: 418 DSLEPKVTPDQAVKLCDRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRC 597
DS EPK+T +QA KLCDRNFGVGADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRC
Sbjct: 97 DSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRC 156
Query: 598 FARFIAELENLRGKQSFTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQ 777
FARFIAELENL+GK SFT+HTGAGLIVPEIQDDGQV+VDMG PIL A DVPTKLP ++ +
Sbjct: 157 FARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLPGNKGE 216
Query: 778 AVVKVGLEVDGVTWNVTCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPAR 957
AVV+ L VDG +WNVTCVSMGNPHC+TF K L+VDDLNL EIGP+FE H++FPAR
Sbjct: 217 AVVQAELVVDGESWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFERHEMFPAR 276
Query: 958 TNTEFVQVFSPSHLKMRVWER 1020
TNTEFV+V S SHLKMRVWER
Sbjct: 277 TNTEFVEVLSHSHLKMRVWER 297
>pdb|3EJX|A Chain A, Crystal Structure Of Diaminopimelate Epimerase From
Arabidopsis Thaliana In Complex With Ll-Azidap
gi|223673993|pdb|3EJX|B Chain B, Crystal Structure Of
Diaminopimelate Epimerase From Arabidopsis Thaliana In
Complex With Ll-Azidap gi|223673994|pdb|3EJX|C Chain C,
Crystal Structure Of Diaminopimelate Epimerase From
Arabidopsis Thaliana In Complex With Ll-Azidap
gi|223673995|pdb|3EJX|D Chain D, Crystal Structure Of
Diaminopimelate Epimerase From Arabidopsis Thaliana In
Complex With Ll-Azidap gi|223673996|pdb|3EJX|E Chain E,
Crystal Structure Of Diaminopimelate Epimerase From
Arabidopsis Thaliana In Complex With Ll-Azidap
gi|223673997|pdb|3EJX|F Chain F, Crystal Structure Of
Diaminopimelate Epimerase From Arabidopsis Thaliana In
Complex With Ll-Azidap gi|223674010|pdb|3EKM|A Chain A,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap gi|223674011|pdb|3EKM|B Chain B,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap gi|223674012|pdb|3EKM|C Chain C,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap gi|223674013|pdb|3EKM|D Chain D,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap gi|223674014|pdb|3EKM|E Chain E,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap gi|223674015|pdb|3EKM|F Chain F,
Crystal Structure Of Diaminopimelate Epimerase Form
Arabidopsis Thaliana In Complex With Irreversible
Inhibitor Dl-Azidap
Length = 317
Score = 405 bits (1041), Expect = e-110
Identities = 193/245 (78%), Positives = 215/245 (87%)
Frame = +1
Query: 286 ASSMNIEAPEKTLKASFLDQKESGFLHFVKYHGLGNDFILVDNRDSLEPKVTPDQAVKLC 465
A+SM+ EK ASFLD+KE+G LHFVKYHGLGNDFILVDNRDS EPK+T +QA KLC
Sbjct: 2 AASMDAVTAEKFSPASFLDKKETGVLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLC 61
Query: 466 DRNFGVGADGVIFAMPGINGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLRGKQS 645
DRNFGVGADGVIFAMPG+NGTDY+MRIFNSDGSEPEMCGNGVRCFARFIAELENL+GK S
Sbjct: 62 DRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHS 121
Query: 646 FTVHTGAGLIVPEIQDDGQVRVDMGQPILTASDVPTKLPASRDQAVVKVGLEVDGVTWNV 825
FT+HTGAGLIVPEIQDDGQV+VDMG PIL A DVPTKL ++ +AVV+ L VDGV+WNV
Sbjct: 122 FTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNV 181
Query: 826 TCVSMGNPHCVTFSTKQCETLQVDDLNLSEIGPQFEHHQVFPARTNTEFVQVFSPSHLKM 1005
TCVSMGNPHC+TF K L+VDDLNL EIGP+FEHH++FPARTNTEFV+V S SHLKM
Sbjct: 182 TCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKM 241
Query: 1006 RVWER 1020
RVWER
Sbjct: 242 RVWER 246