BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00002504
         (1299 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4...   300   1e-78
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   300   1e-78
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The...   288   4e-75
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   285   2e-74
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   283   9e-74
gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Mor...   281   3e-73
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260...   281   3e-73
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr...   278   3e-72
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              274   5e-71
ref|XP_007038339.1| DNA binding protein, putative isoform 1 [The...   272   3e-70
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...   271   6e-70
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600...   270   8e-70
ref|XP_004307797.1| PREDICTED: uncharacterized protein LOC101300...   270   8e-70
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...   266   2e-68
ref|XP_006490148.1| PREDICTED: DNA-directed RNA polymerase III s...   263   2e-67
ref|XP_006421620.1| hypothetical protein CICLE_v10005426mg [Citr...   262   2e-67
ref|XP_002303490.2| hypothetical protein POPTR_0003s10650g [Popu...   254   6e-65
ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prun...   253   2e-64
ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family pr...   251   5e-64
ref|XP_007220771.1| hypothetical protein PRUPE_ppa024519mg [Prun...   251   6e-64

>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
            cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
            polymerase III subunit RPC4, putative [Theobroma cacao]
          Length = 294

 Score =  300 bits (767), Expect = 1e-78
 Identities = 160/309 (51%), Positives = 209/309 (67%)
 Frame = -3

Query: 1243 EETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGS 1064
            E+    T AP RK+RF PK PPR+APK  + KT+ +EDT+A Q R+LL+R+N+ S +   
Sbjct: 2    EQKDNKTNAP-RKMRFAPKAPPRQAPKLEV-KTEVVEDTDAVQARDLLQRLNQTSAKTKP 59

Query: 1063 KVERKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESNDG 884
            KVE+K      QVAFG  GAS S++ FG           + +G+SR+S   L  +    G
Sbjct: 60   KVEKKVASS--QVAFGHGGASASMKLFG-----------VSKGASRTSRETLNGVVHTPG 106

Query: 883  PDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSINH 704
                      +Y E WDY +YYPVTLP+R+P+SGNPE LDEEEF   S N+ +DE+S+  
Sbjct: 107  -----LREEKEYREPWDYYSYYPVTLPMRRPYSGNPEFLDEEEFA--SENITFDENSVEP 159

Query: 703  AAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEEL 524
            A ELGLM+E+ E  M FLQLP +LP++K+S +  G E+  S  P  R G+ +K C LEEL
Sbjct: 160  AVELGLMDENLEPSMFFLQLPPTLPMIKQSGTTAGLEVDSSSKPAARVGSVKKTCGLEEL 219

Query: 523  PAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRAI 344
            PAG +GKMLVHKSGA+KLKLG TLYDV+PG +C+F QDV A+NT EK CCV+G L KRA+
Sbjct: 220  PAGLMGKMLVHKSGAVKLKLGDTLYDVTPGLNCVFAQDVVAVNTAEKQCCVVGELDKRAV 279

Query: 343  VTPDVDSLL 317
            +TPDVDS+L
Sbjct: 280  LTPDVDSVL 288


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  300 bits (767), Expect = 1e-78
 Identities = 168/316 (53%), Positives = 204/316 (64%)
 Frame = -3

Query: 1243 EETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGS 1064
            E     T A +RKVRF PK P R+ PK  + K++  ED +AAQ  EL+R  NE S +   
Sbjct: 4    ESLKNSTAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKP 62

Query: 1063 KVERKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESNDG 884
            K E+K    P QVAFG  GAS SIR++G              G++ SS    QD  S  G
Sbjct: 63   KAEKKLA--PTQVAFGYGGASASIRSYGT-----------PRGATNSSR--YQDPASGGG 107

Query: 883  PDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSINH 704
               S      +Y E WDY  YYPVTLPLR+P+SGNPE LDEEEFG  S +  YDE+S N 
Sbjct: 108  LYGSGLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNP 167

Query: 703  AAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEEL 524
            A ELGLM+E++EA MLFLQLP ++P++K++A+A+ KE               K C LEEL
Sbjct: 168  AMELGLMDENQEASMLFLQLPATMPMIKQAATAEVKE--------------NKTCRLEEL 213

Query: 523  PAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRAI 344
            P+GF+GKMLV+KSGAIKLKLG TLYDVSPG DC+F QDV AINT++K CCVLG L KRA+
Sbjct: 214  PSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAV 273

Query: 343  VTPDVDSLLEQCD*LG 296
            VTPDVDS L   D LG
Sbjct: 274  VTPDVDSALSSMDDLG 289


>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
            gi|508775585|gb|EOY22841.1| DNA binding protein, putative
            isoform 2 [Theobroma cacao]
          Length = 328

 Score =  288 bits (737), Expect = 4e-75
 Identities = 161/322 (50%), Positives = 207/322 (64%), Gaps = 17/322 (5%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRKAPKPTLTKTKEI--EDTEAAQTRELLRRVNEGSRRRGSKVERKXXXX 1037
            RKVRF PK P       T     E+  ED EAAQ + LL R NE   R+  KVE+K    
Sbjct: 11   RKVRFAPKAPQSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTRQRPKVEKKSS-- 68

Query: 1036 PVQVAFGPSGASPSI-RTFGR---GISSRSIESVLQEGSSRSSEPI----------LQDL 899
              Q++FGP   S ++ R +G    G S +S +S  +       + I            D+
Sbjct: 69   -AQISFGPGAPSSNLLRAYGSQRGGTSGKSTDSRQRSPDDNDGQIIGSFPSASKEDRTDI 127

Query: 898  ESNDGPDASDXXXXXKYVECWDYNN-YYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYD 722
             S+D  +AS      +Y E WDY++ YYP+TLPLR+P+SG+PE LD+ EF  ++A  EYD
Sbjct: 128  CSSDAIEASAPKIKREYREPWDYHHTYYPITLPLRRPYSGDPELLDQAEFV-EAARKEYD 186

Query: 721  EDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKG 542
            E +IN A++LGL+EE E+ +M F QLP +LP++KR AS KGKE AE+L    R G  +KG
Sbjct: 187  EKTINPASDLGLLEEGEKGKMFFFQLPANLPVIKRLASTKGKEKAENLGSSERFGALKKG 246

Query: 541  CSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGN 362
            C LEELP GF+GKMLV+KSGA+KLKLG+TLYDVSPGSDCIF QDVAA+NT EKHCCV+G 
Sbjct: 247  CQLEELPGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGE 306

Query: 361  LSKRAIVTPDVDSLLEQCD*LG 296
            L KR +VTPD+ S+L     LG
Sbjct: 307  LGKRVVVTPDISSVLNSVIDLG 328


>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
            gi|223550094|gb|EEF51581.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 328

 Score =  285 bits (730), Expect = 2e-74
 Identities = 155/315 (49%), Positives = 207/315 (65%), Gaps = 16/315 (5%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRKAPKPTLTKTK----EIEDTEAAQTRELLRRVNEGSRRRGSKVERKXX 1043
            RKV+FTPK P ++ P+ T+ KT+    +  + EA Q ++L+R+ NE  RR+G +VE+K  
Sbjct: 11   RKVKFTPKAPSQRRPRRTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFRRQGPRVEKKST 70

Query: 1042 XXPVQVAFGPSG-ASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESN-------- 890
               VQVAFGP   +S SIRTFG       + S +++ +    + ++  L ++        
Sbjct: 71   ---VQVAFGPGATSSTSIRTFGVSKGENPVSSGIKDSTDDDGKIVISSLSTDKEDEIINC 127

Query: 889  --DGPDASDXXXXXKYVECWDYNN-YYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDE 719
              +  DA        Y E WDY+  YYP TLPLR+P+SG+P  LDE EFG  +  LEYDE
Sbjct: 128  ASEDIDALPLKIKKDYREPWDYDRTYYPTTLPLRRPYSGDPVLLDEAEFGEAARKLEYDE 187

Query: 718  DSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGC 539
             ++N A++L L+EE +  +M+F QLP  LPLVKRSASAKGKE AE   P +    A+K  
Sbjct: 188  STMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSASAKGKEKAEGSIPSQGKNAAKKES 247

Query: 538  SLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNL 359
            SL+ L AG++GKMLV++SGA+KLKLG TLYDVS GSDC+F QDV AINT  KHCC +G L
Sbjct: 248  SLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSDCMFAQDVMAINTAAKHCCTIGEL 307

Query: 358  SKRAIVTPDVDSLLE 314
             KRA+VTPDVDSLL+
Sbjct: 308  EKRAVVTPDVDSLLD 322


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  283 bits (725), Expect = 9e-74
 Identities = 174/334 (52%), Positives = 204/334 (61%), Gaps = 35/334 (10%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRKAPKPTLTKTKEIEDT-EAAQTRELLRRVNEGSRRRGSKVERKXXXXP 1034
            RKVRF PK PPR+ PK T  +    E+  EA + + LLRRVNE  RR+G KVE+      
Sbjct: 12   RKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVEKTSS--- 68

Query: 1033 VQVAFGPSGASPS--IRTFG--RGISSRSIESVLQEGSSRSSEPILQDLESNDGPDASDX 866
            VQV FGP  A+PS  IRTFG  R  +S     +  + S+   E I     S   PD ++ 
Sbjct: 69   VQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSXSTTKPDETNG 128

Query: 865  XXXXK----------YVECWDY-NNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDE 719
                           Y E WDY ++YYP TLPLRKPHSG+PE LDE EFG  S NLEYDE
Sbjct: 129  XFADATDDSAQIRKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDE 188

Query: 718  DSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEI----------------- 590
             +IN A+ELGL+EESE+ RM   QLP +LPLVK+SASAKGKEI                 
Sbjct: 189  KTINPASELGLLEESEKGRMFLFQLPANLPLVKQSASAKGKEIVGNSTSLEGIYASAKGK 248

Query: 589  --AESLSPPRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFP 416
              A S    +  GT+E  C LE+L  G  GKMLV+KSGAIKLKLG+ LYDVSPG DC   
Sbjct: 249  QVARSSLSSKSIGTSEHSCRLEDLAGGHXGKMLVYKSGAIKLKLGEILYDVSPGLDCTCV 308

Query: 415  QDVAAINTKEKHCCVLGNLSKRAIVTPDVDSLLE 314
            QDV AINT +KHC  LG L KR IVTPDVDSLL+
Sbjct: 309  QDVVAINTVDKHCYALGELGKRVIVTPDVDSLLD 342


>gb|EXB38927.1| DNA-directed RNA polymerase III subunit RPC4 [Morus notabilis]
          Length = 328

 Score =  281 bits (720), Expect = 3e-73
 Identities = 161/326 (49%), Positives = 206/326 (63%), Gaps = 14/326 (4%)
 Frame = -3

Query: 1249 MAEETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRR 1070
            M   T K      RK RF PK PP + PK  + K + +E+T+A Q R LLRR NEGS R 
Sbjct: 1    MDPATLKSEPDAPRKRRFMPKAPPSRVPKAEV-KAEVVEETDADQARVLLRRFNEGSTRA 59

Query: 1069 GSKVERKXXXXPVQVAFGPSGASPSIRTFG--RG--------ISSRSIESVLQEGSSRSS 920
              KVE+K      QVAFG  GAS +IR++G  +G         ++R + +     S+ + 
Sbjct: 60   KPKVEKKVAA--AQVAFGYGGASNTIRSYGVPKGGYRNSQGPPATRMLFTSAAFLSTVNK 117

Query: 919  EPILQDLESN---DGPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFG 749
               + D++++   DG   S      +Y E WDY +YYP TLP R+PHSGNPE LDEEEFG
Sbjct: 118  SFPMHDIKNHVLTDGAFPSGTRQEKEYKEPWDYYSYYPSTLPFRRPHSGNPEFLDEEEFG 177

Query: 748  GDSANLEYDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSAS-AKGKEIAESLSP 572
             D+  + YDE S   A ELGL+EE+ E  M+ LQLP  +PL+KRSA+ A G+E  +S   
Sbjct: 178  ADTETINYDETSAKAATELGLVEENPETSMILLQLPPIMPLMKRSANTAAGQEATKSSPA 237

Query: 571  PRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINT 392
            P  A    K C+L ELPAGF+GKMLV++SGAIKLK+G TLYDVS G DC+F QDV AINT
Sbjct: 238  PVVAQATHKACALHELPAGFMGKMLVYRSGAIKLKIGDTLYDVSSGMDCVFSQDVVAINT 297

Query: 391  KEKHCCVLGNLSKRAIVTPDVDSLLE 314
             EKHCC +G L KRA +TPDVD +L+
Sbjct: 298  VEKHCCAVGELKKRAAITPDVDFILQ 323


>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
            gi|297745083|emb|CBI38675.3| unnamed protein product
            [Vitis vinifera]
          Length = 348

 Score =  281 bits (720), Expect = 3e-73
 Identities = 170/334 (50%), Positives = 203/334 (60%), Gaps = 35/334 (10%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRKAPKPTLTKTKEIEDT-EAAQTRELLRRVNEGSRRRGSKVERKXXXXP 1034
            RKVRF PK PPR+ PK T  +    E+  EA + + LLRRVNE  RR+G KVE+      
Sbjct: 12   RKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVEKTSS--- 68

Query: 1033 VQVAFGPSGASPS--IRTFG--RGISSRSIESVLQEGSSRSSEPILQDLESNDGPDASDX 866
            VQV FGP  A+PS  IRTFG  R  +S     +  + S+   E I     S   PD ++ 
Sbjct: 69   VQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSPSTTKPDETNG 128

Query: 865  XXXXK----------YVECWDY-NNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDE 719
                           Y E WDY ++YYP TLPLRKPHSG+PE LDE EFG  S NLEYDE
Sbjct: 129  YFADATDDSAQIRKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDE 188

Query: 718  DSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSP----------- 572
             +IN A+ELGL+EESE+ RM   QLP +LPL K+S SAKGKEI E+ +            
Sbjct: 189  KTINPASELGLLEESEKGRMFLFQLPANLPLFKQSPSAKGKEIVENSTSLEGIYASAKGK 248

Query: 571  --------PRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFP 416
                     +  GT+E  C LE+L  G +GKMLV+KSGAIKLKLG+ LYDVSPG DC   
Sbjct: 249  QVARSSLSSKSIGTSEHSCRLEDLAGGHIGKMLVYKSGAIKLKLGEILYDVSPGLDCTCV 308

Query: 415  QDVAAINTKEKHCCVLGNLSKRAIVTPDVDSLLE 314
            QDV AINT +KHC  LG L KR IVTPDVDSLL+
Sbjct: 309  QDVVAINTVDKHCYALGELGKRVIVTPDVDSLLD 342


>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
            gi|568853572|ref|XP_006480425.1| PREDICTED:
            uncharacterized protein LOC102622464 [Citrus sinensis]
            gi|557530644|gb|ESR41827.1| hypothetical protein
            CICLE_v10012311mg [Citrus clementina]
          Length = 303

 Score =  278 bits (712), Expect = 3e-72
 Identities = 152/313 (48%), Positives = 205/313 (65%), Gaps = 2/313 (0%)
 Frame = -3

Query: 1249 MAEETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRR--VNEGSR 1076
            M  E  K T+  +RK+++ PK PPR+ PK  + KT+ +E+ +AAQ  +LL+R   N+G+ 
Sbjct: 1    MEPEPPKSTSNATRKIKYAPKAPPRRVPKAEV-KTEMVENADAAQAMDLLQRFNANQGAL 59

Query: 1075 RRGSKVERKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLE 896
            +   KVE+K    P Q+AFG  GAS  I+++G           + +G S SS    Q   
Sbjct: 60   KGRPKVEKKVA--PSQIAFGQGGASTFIKSYG-----------IPKGGSSSSRG--QGSA 104

Query: 895  SNDGPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDED 716
             N G  AS      +Y E WDY +YYPV+LPLR+P+SG+PE LDEEEFG  S  + YDE 
Sbjct: 105  VNGGAHASGTRLGKEYQEPWDYYSYYPVSLPLRRPYSGSPELLDEEEFGEASETINYDES 164

Query: 715  SINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCS 536
            S+N A ELGLMEE+ E  M+FLQLP +LPL K+ A+   +++ ES S    A   EK  S
Sbjct: 165  SMNPAEELGLMEENLEPNMIFLQLPPTLPLKKQPATGNERQVTESSSKHEGATAKEKTSS 224

Query: 535  LEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLS 356
            L ELP  F+GK+LV++SGA+KLKLG+T+Y+V+PG DC+F QDV  INT EKH CV G L+
Sbjct: 225  LSELPGAFMGKLLVYRSGAVKLKLGETVYNVTPGMDCMFAQDVVVINTAEKHFCVAGELN 284

Query: 355  KRAIVTPDVDSLL 317
            KRAI++PDVD +L
Sbjct: 285  KRAILSPDVDFIL 297


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  274 bits (701), Expect = 5e-71
 Identities = 161/324 (49%), Positives = 195/324 (60%), Gaps = 8/324 (2%)
 Frame = -3

Query: 1243 EETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGS 1064
            E     T A +RKVRF PK P R+ PK  + K++  ED +AAQ  EL+R  N     R  
Sbjct: 4    ESLKNSTAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNVFILWRRI 62

Query: 1063 KVE--------RKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPIL 908
                             P QVAFG  GAS SIR++G              G++ SS    
Sbjct: 63   IFYFFIFFLFCSHNCMAPTQVAFGYGGASASIRSYGT-----------PRGATNSSR--Y 109

Query: 907  QDLESNDGPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLE 728
            QD  S  G   S      +Y E WDY  YYPVTLPLR+P+SGNPE LDEEEFG  S +  
Sbjct: 110  QDPASGGGLYGSGLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTA 169

Query: 727  YDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAE 548
            YDE+S N A ELGLM+E++EA MLFLQLP ++P++K++A+A+                  
Sbjct: 170  YDENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQAATAET----------------- 212

Query: 547  KGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVL 368
              C LEELP+GF+GKMLV+KSGAIKLKLG TLYDVSPG DC+F QDV AINT++K CCVL
Sbjct: 213  --CRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVL 270

Query: 367  GNLSKRAIVTPDVDSLLEQCD*LG 296
            G L KRA+VTPDVDS L   D LG
Sbjct: 271  GELKKRAVVTPDVDSALSSMDDLG 294


>ref|XP_007038339.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
            gi|508775584|gb|EOY22840.1| DNA binding protein, putative
            isoform 1 [Theobroma cacao]
          Length = 359

 Score =  272 bits (695), Expect = 3e-70
 Identities = 161/353 (45%), Positives = 207/353 (58%), Gaps = 48/353 (13%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRKAPKPTLTKTKEI--EDTEAAQTRELLRRVNEGSRRRGSKVERKXXXX 1037
            RKVRF PK P       T     E+  ED EAAQ + LL R NE   R+  KVE+K    
Sbjct: 11   RKVRFAPKAPQSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTRQRPKVEKKSS-- 68

Query: 1036 PVQVAFGPSGASPSI-RTFGR---GISSRSIESVLQEGSSRSSEPI----------LQDL 899
              Q++FGP   S ++ R +G    G S +S +S  +       + I            D+
Sbjct: 69   -AQISFGPGAPSSNLLRAYGSQRGGTSGKSTDSRQRSPDDNDGQIIGSFPSASKEDRTDI 127

Query: 898  ESNDGPDASDXXXXXKYVECW-------------------------------DYNN-YYP 815
             S+D  +AS      +Y E W                               DY++ YYP
Sbjct: 128  CSSDAIEASAPKIKREYREPWVKVCSLFVCLRPSAHLCAIPLILLSSMIALQDYHHTYYP 187

Query: 814  VTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSINHAAELGLMEESEEARMLFLQLPTS 635
            +TLPLR+P+SG+PE LD+ EF  ++A  EYDE +IN A++LGL+EE E+ +M F QLP +
Sbjct: 188  ITLPLRRPYSGDPELLDQAEFV-EAARKEYDEKTINPASDLGLLEEGEKGKMFFFQLPAN 246

Query: 634  LPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQT 455
            LP++KR AS KGKE AE+L    R G  +KGC LEELP GF+GKMLV+KSGA+KLKLG+T
Sbjct: 247  LPVIKRLASTKGKEKAENLGSSERFGALKKGCQLEELPGGFMGKMLVYKSGAVKLKLGET 306

Query: 454  LYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRAIVTPDVDSLLEQCD*LG 296
            LYDVSPGSDCIF QDVAA+NT EKHCCV+G L KR +VTPD+ S+L     LG
Sbjct: 307  LYDVSPGSDCIFAQDVAAVNTTEKHCCVIGELGKRVVVTPDISSVLNSVIDLG 359


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
            gi|449500539|ref|XP_004161125.1| PREDICTED:
            uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score =  271 bits (692), Expect = 6e-70
 Identities = 145/318 (45%), Positives = 201/318 (63%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1249 MAEETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRR 1070
            M +   K  TA  RK++F PK P R+ PKP + K +  ED +AAQ R+LL+R NE ++R 
Sbjct: 1    MEQNPPKNKTAAPRKLKFAPKAPVRRIPKPEV-KAEVAEDADAAQARDLLKRFNESTQRA 59

Query: 1069 GSKVERKXXXXPVQVAFGPSGASPSIRTFG---RGISSRSIESVLQEGSSRSSEPILQDL 899
              +V RK    P QVAFG  G+S ++R++G    G   R+ +  L   +S+         
Sbjct: 60   KQRVGRKAA--PTQVAFGSGGSSSTLRSYGVSKAGNRPRNEDGTLPASTSKE-------- 109

Query: 898  ESNDGPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDE 719
                            YVE WDY +YYPVTLPLR+P+SGNP+ L+EEEFG  S NL YDE
Sbjct: 110  ----------------YVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDE 153

Query: 718  DSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGC 539
            ++   A  LGL+EE+ EA +LFLQLP  +P++K+S+S +      S    + +   +K C
Sbjct: 154  NTTTAAMNLGLLEENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTC 213

Query: 538  SLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNL 359
            S+ ELP+G +GK+LV++SGA+KLKLG  +YDVS G DC F Q+VAAIN + K CC++G L
Sbjct: 214  SMNELPSGSIGKLLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGEL 273

Query: 358  SKRAIVTPDVDSLLEQCD 305
            SKRAI+TPDVDS+L+  +
Sbjct: 274  SKRAILTPDVDSMLKNIE 291


>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
          Length = 283

 Score =  270 bits (691), Expect = 8e-70
 Identities = 152/311 (48%), Positives = 202/311 (64%), Gaps = 1/311 (0%)
 Frame = -3

Query: 1243 EETSKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIE-DTEAAQTRELLRRVNEGSRRRG 1067
            +  S  T AP RKVRF PK PPR+A K  L K + +E D +AA+  EL++R NE S +  
Sbjct: 2    DSDSFATKAP-RKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVK 60

Query: 1066 SKVERKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESND 887
             KVE+K    P QVAFG  G+S S++++G       +   + +G     E + ++     
Sbjct: 61   HKVEKKG---PTQVAFGYGGSSSSLKSYGH---YNKVSGSMSDGGI-GGERVQKE----- 108

Query: 886  GPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSIN 707
                        Y E WDY   YPVTLP+R+P+SGNPE LDEEEFG  S +L YDE+SI 
Sbjct: 109  ------------YTEPWDYYTNYPVTLPVRRPYSGNPELLDEEEFGEASRSLTYDENSIK 156

Query: 706  HAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEE 527
             A +LGLMEES E +M  +QLPT +P++K+S   +G E+A S  P +      K CSL E
Sbjct: 157  PAMDLGLMEESLEEKMFLVQLPT-MPMLKQSIKTEGSEMANSSKPSKA-----KACSLNE 210

Query: 526  LPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRA 347
            LPAGF+GKMLV+KSGA+KLKLG+TL+++SPG DC F QDV A+NT+EK+C  +G L+KR 
Sbjct: 211  LPAGFMGKMLVYKSGAVKLKLGETLFNLSPGMDCSFAQDVVAVNTEEKYCSNIGELTKRI 270

Query: 346  IVTPDVDSLLE 314
            I+TPDVDSLL+
Sbjct: 271  IITPDVDSLLD 281


>ref|XP_004307797.1| PREDICTED: uncharacterized protein LOC101300483 [Fragaria vesca
            subsp. vesca]
          Length = 324

 Score =  270 bits (691), Expect = 8e-70
 Identities = 160/324 (49%), Positives = 208/324 (64%), Gaps = 21/324 (6%)
 Frame = -3

Query: 1222 TAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQ--TRELLRRVNEGSRRRGSKVERK 1049
            +AP RK RF P+  PR+ P PT     E+ED E  +   + LLR+  E   RR  K E+K
Sbjct: 7    SAPRRKGRFKPRAQPRR-PNPTT----EVEDAEKEEREAKALLRKFQENRARRAPKAEKK 61

Query: 1048 XXXXPVQVAFGPSG-ASPSIRTFGRGISSRSIESVLQEGSSR-----------SSEPILQ 905
                 V+VAFGP   +S S+RT+G       +E+ L +GSS            SS P+  
Sbjct: 62   SAAA-VEVAFGPGAQSSSSLRTYG----VPKLEN-LDQGSSLGVKGYDGHKILSSSPLAT 115

Query: 904  DLESNDGP------DASDXXXXXKYVECWDY-NNYYPVTLPLRKPHSGNPEQLDEEEFGG 746
                 D P      DAS       YVE WDY N+ YP++LPLRKP+SG+P+ L+E+EF  
Sbjct: 116  GGAGTDAPMDIDTADASISNVKNHYVEIWDYENSKYPISLPLRKPYSGDPDILNEKEFVE 175

Query: 745  DSANLEYDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPR 566
            D+A  EYDE +IN A+ELGL+E++ + ++LF+QLP +LPLVKRS SAKGKE   S +P  
Sbjct: 176  DAAK-EYDESTINCASELGLLEQNPKEKLLFVQLPPTLPLVKRSTSAKGKEKVGSSTPSE 234

Query: 565  RAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKE 386
            + G A+K   LEEL  G++GKMLV+KSGA+K KLG  LYDVSPGSDC+F QD+AAINT  
Sbjct: 235  KVGAAKKSGGLEELSEGYMGKMLVYKSGAVKFKLGDALYDVSPGSDCVFAQDIAAINTAA 294

Query: 385  KHCCVLGNLSKRAIVTPDVDSLLE 314
            + CCVLG L +R +VTPDVDSLL+
Sbjct: 295  RKCCVLGELGQRVVVTPDVDSLLD 318


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
            gi|223544779|gb|EEF46295.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 286

 Score =  266 bits (679), Expect = 2e-68
 Identities = 144/306 (47%), Positives = 194/306 (63%)
 Frame = -3

Query: 1234 SKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGSKVE 1055
            SK    P RK+++ PK PPR+ PKP + K+++ ED +A Q  +L+++  E S R   K E
Sbjct: 3    SKPPQDPPRKLKYMPKAPPRRPPKPEV-KSEKAEDEDATQAMKLMKQFQERSMRAKPKAE 61

Query: 1054 RKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESNDGPDA 875
            +K      Q+AFG   ASPSI+++       ++     +GSS +      +L   +    
Sbjct: 62   KKVQAS--QIAFGFGAASPSIKSYAAPKVGAAVNH--NQGSSVNGGAYSSELGEKE---- 113

Query: 874  SDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSINHAAE 695
                    Y+E W+Y +YYPVTLPLR+P+SGNP  L+ EEFG  S   EYDE+S N A  
Sbjct: 114  --------YIEPWNYYSYYPVTLPLRRPYSGNPATLNAEEFGEASDTSEYDENSTNSAIN 165

Query: 694  LGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEELPAG 515
            LGLMEE+ EA M FLQLP ++P++KR A+A G ++ E           EK C L+ELPAG
Sbjct: 166  LGLMEENVEANMFFLQLPPTVPMIKRLATADGHKVKE-----------EKTCKLDELPAG 214

Query: 514  FVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRAIVTP 335
             +GKMLV++SGA+KLKLG TLYDVSPG D  F QD+AAINT EKHCCV+  + K AIVTP
Sbjct: 215  HMGKMLVYRSGAVKLKLGDTLYDVSPGLDFAFAQDIAAINTAEKHCCVVAEIDKHAIVTP 274

Query: 334  DVDSLL 317
            DVD+++
Sbjct: 275  DVDAII 280


>ref|XP_006490148.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like [Citrus
            sinensis]
          Length = 324

 Score =  263 bits (671), Expect = 2e-67
 Identities = 154/318 (48%), Positives = 196/318 (61%), Gaps = 19/318 (5%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRK------APKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGSKVERK 1049
            RKVRF PK PP        AP P      + ED EA + + LLR+ NE + RR  KVE+K
Sbjct: 13   RKVRFAPKAPPPSRQPKVTAPTPVPRPESKHEDPEA-EAQRLLRQFNEANARRRPKVEKK 71

Query: 1048 XXXXPVQVAFGPS-GASPSIRTFG--------RGISSRSIESVLQEGSSRSSEPILQDLE 896
                  QVAFG    +SPSI++FG        +G  S  I+S   E    +  P+    E
Sbjct: 72   SS----QVAFGAGDSSSPSIKSFGPRREVSSAKGTESEIIDSTSDERQIVNFSPVTAR-E 126

Query: 895  SNDGPDASDXXXXXK----YVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLE 728
                P +SD     K    Y E W+Y+ YYP TLP RKP+SG+PE LD+EEFG ++ N E
Sbjct: 127  DRSAPISSDASSTQKIKEDYKEPWNYDTYYPTTLPWRKPNSGDPEVLDQEEFGENTRNSE 186

Query: 727  YDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAE 548
            YDE+S+N AA+LGL++ESE  ++ F QLP  LPL KR AS KGKE AES  P  R   A 
Sbjct: 187  YDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDKRPASTKGKEKAESSKPLGRT-DAP 245

Query: 547  KGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVL 368
            K   L +LP G++GKMLV+KSGA+K KLG TL+DVS GSDC F QD+  ++ K+K CCVL
Sbjct: 246  KDLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLFDVSAGSDCSFAQDLVVMDVKDKTCCVL 305

Query: 367  GNLSKRAIVTPDVDSLLE 314
            G L K A+V+PD+DS L+
Sbjct: 306  GQLDKLAVVSPDIDSFLK 323


>ref|XP_006421620.1| hypothetical protein CICLE_v10005426mg [Citrus clementina]
            gi|557523493|gb|ESR34860.1| hypothetical protein
            CICLE_v10005426mg [Citrus clementina]
          Length = 324

 Score =  262 bits (670), Expect = 2e-67
 Identities = 155/318 (48%), Positives = 195/318 (61%), Gaps = 19/318 (5%)
 Frame = -3

Query: 1210 RKVRFTPKIPPRK------APKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGSKVERK 1049
            RKVRF PK PP        AP P      + ED EA + + LLR+ NE + RR  KVE+K
Sbjct: 13   RKVRFAPKAPPPSRQPKVTAPTPVPRPESKHEDPEA-EAQRLLRQFNEANARRRPKVEKK 71

Query: 1048 XXXXPVQVAFGPS-GASPSIRTFG--------RGISSRSIESVLQEGSSRSSEPILQDLE 896
                  QVAFG    +SPSI++FG        +G  S  I+S   E    +  P     E
Sbjct: 72   SS----QVAFGAGDSSSPSIKSFGPRREVSSAKGTESEIIDSTSDERQIVNFSPATAR-E 126

Query: 895  SNDGPDASDXXXXXK----YVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLE 728
                P +SD     K    Y E W+Y+ YYP TLP RKP+SG+PE LD+EEFG ++ N E
Sbjct: 127  DRSAPISSDASSTQKIKEDYKEPWNYDTYYPTTLPWRKPNSGDPEVLDQEEFGENTRNSE 186

Query: 727  YDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAE 548
            YDE+S+N AA+LGL++ESE  ++ F QLP  LPL KR AS KGKE AES  P  R   A 
Sbjct: 187  YDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDKRPASTKGKEKAESSKPLGRT-DAP 245

Query: 547  KGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVL 368
            K   L +LP G++GKMLV+KSGA+K KLG TL+DVS GSDC F QD+  I+ K+K CCVL
Sbjct: 246  KDLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLFDVSAGSDCSFAQDLVVIDVKDKTCCVL 305

Query: 367  GNLSKRAIVTPDVDSLLE 314
            G L K A+V+PD+DS L+
Sbjct: 306  GQLDKLAVVSPDIDSFLK 323


>ref|XP_002303490.2| hypothetical protein POPTR_0003s10650g [Populus trichocarpa]
            gi|550342916|gb|EEE78469.2| hypothetical protein
            POPTR_0003s10650g [Populus trichocarpa]
          Length = 368

 Score =  254 bits (649), Expect = 6e-65
 Identities = 153/333 (45%), Positives = 207/333 (62%), Gaps = 23/333 (6%)
 Frame = -3

Query: 1255 RLMAEETSKVTTAPSR-KVRFTPKIPPRKAPKPTLTKTKEI-------EDTEAAQTRELL 1100
            +L A +     ++PSR K++F PK+P R+  +P++ KT+EI       ED EAAQ + L+
Sbjct: 40   KLRAMDDQVDPSSPSRTKLKFKPKLP-RRQRRPSVPKTEEINDDRRSNEDEEAAQAQMLI 98

Query: 1099 RRVNEGSRRRGSKVERKXXXXPVQVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSS 920
             + NE  RR+  K ++      VQVAFGP   SP +      I   ++      GSS S 
Sbjct: 99   HKFNENLRRQVPKEKKPQ----VQVAFGPGAPSPPLL-----IRKYNVPVHENTGSSWSG 149

Query: 919  EPILQDLESNDG-----PDAS---------DXXXXXKYVECWDYNN-YYPVTLPLRKPHS 785
                +D   +DG     P A+               +Y E WDY++ YYP TLPLR P+S
Sbjct: 150  T---EDTRDDDGKIFVPPSAARVDGAINPLSLKGKRRYKEPWDYHHIYYPNTLPLRPPYS 206

Query: 784  GNPEQLDEEEFGGDSANLEYDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVKRSASA 605
            G+P+ LDE EFG ++ NLEYDE +IN A++LGL+EE +  R+ F Q+P  LP +KRSASA
Sbjct: 207  GDPKLLDEAEFGEEARNLEYDETTINPASDLGLLEECDNERLFFFQVPEKLPFLKRSASA 266

Query: 604  KGKEIAESLSPPRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDC 425
            KGKE A+ +S P  + +A +  S EELP G++GKMLV++SGAIKLKLG  LYDVSPGS+C
Sbjct: 267  KGKERAD-MSMPSESKSAARKTSFEELPKGYMGKMLVYRSGAIKLKLGDALYDVSPGSEC 325

Query: 424  IFPQDVAAINTKEKHCCVLGNLSKRAIVTPDVD 326
             F QDV AINT  K CC +G L KRA+VTPD++
Sbjct: 326  TFAQDVMAINTAGKDCCAIGELGKRAVVTPDIE 358


>ref|XP_007204524.1| hypothetical protein PRUPE_ppa017748mg [Prunus persica]
            gi|462400055|gb|EMJ05723.1| hypothetical protein
            PRUPE_ppa017748mg [Prunus persica]
          Length = 281

 Score =  253 bits (645), Expect = 2e-64
 Identities = 140/302 (46%), Positives = 191/302 (63%), Gaps = 2/302 (0%)
 Frame = -3

Query: 1204 VRFTPKIPPRKAPKPTLTKTKE--IEDTEAAQTRELLRRVNEGSRRRGSKVERKXXXXPV 1031
            +RF PK P R+ PKP +    +   E+++A + +ELL+R NE S R   KVE+K    P 
Sbjct: 1    MRFIPKAP-RRVPKPEVKTEVDHGAEESDAEKAKELLKRFNEQSSRARLKVEKKVV--PT 57

Query: 1030 QVAFGPSGASPSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESNDGPDASDXXXXXK 851
            Q+ FG  GAS +++++G             +G S SS        +N G  AS      +
Sbjct: 58   QIVFGYGGASTTMKSYGA-----------PKGGSASSA-------TNAG--ASGVKEEKE 97

Query: 850  YVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSINHAAELGLMEESE 671
            Y   WD  +YYPVTLPLR P+SGNPE  +EEEFG  S    YDE+S   A +LGL+EE++
Sbjct: 98   YSSPWDQYSYYPVTLPLRPPYSGNPEIRNEEEFGEGSEESTYDENSTTPANDLGLLEENK 157

Query: 670  EARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEELPAGFVGKMLVH 491
               M FLQLP ++P +KRSA+A  +E+ +S  PP  A   +K CSL ELPAGF+GKMLV+
Sbjct: 158  ATSMFFLQLPPNMPTIKRSATADSQEVTKSSGPPGGARNMQKPCSLSELPAGFMGKMLVY 217

Query: 490  KSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRAIVTPDVDSLLEQ 311
            +SGA+K+K+G +L+DVSPG +C F QDV  +N  EK C ++G L+KRAI+TPDVDS+L  
Sbjct: 218  RSGAVKMKIGDSLFDVSPGMNCDFAQDVVVVNKAEKGCGIIGELNKRAIITPDVDSILAS 277

Query: 310  CD 305
             D
Sbjct: 278  ID 279


>ref|XP_006381642.1| DNA-directed RNA polymerase 3 RPC4 family protein [Populus
            trichocarpa] gi|550336350|gb|ERP59439.1| DNA-directed RNA
            polymerase 3 RPC4 family protein [Populus trichocarpa]
          Length = 292

 Score =  251 bits (641), Expect = 5e-64
 Identities = 141/312 (45%), Positives = 190/312 (60%), Gaps = 4/312 (1%)
 Frame = -3

Query: 1234 SKVTTAPSRKVRFTPKIPPRKAPKPTLTKTKEIEDTEAAQTRELLRRVNEGSRRRGSKVE 1055
            SK      RK RF PK PPR+ PKP + KT+++E+ +  Q   L+++  E S ++  K+ 
Sbjct: 3    SKPPQDAQRKYRFMPKAPPRRVPKPEV-KTEKVENVDTLQAMNLMKQFQERSLKQ--KIT 59

Query: 1054 RKXXXXPVQVAFGPSGAS----PSIRTFGRGISSRSIESVLQEGSSRSSEPILQDLESND 887
             +     + +AFGP  A+    PS  T  R            +GSS           SN 
Sbjct: 60   NEKKVQKLDIAFGPGAAATKPFPSWSTINR-----------DQGSS-----------SNG 97

Query: 886  GPDASDXXXXXKYVECWDYNNYYPVTLPLRKPHSGNPEQLDEEEFGGDSANLEYDEDSIN 707
              DA        Y+E WDY + YPV+LP+R+P+SGN   LDEEEFG  S    YDE+S N
Sbjct: 98   NADAPGPREKE-YIEPWDYYSNYPVSLPMRRPYSGNSAILDEEEFGEVSEAATYDENSTN 156

Query: 706  HAAELGLMEESEEARMLFLQLPTSLPLVKRSASAKGKEIAESLSPPRRAGTAEKGCSLEE 527
             A ELGLMEE+ EA MLF+QLP ++P++KRSA+A G E+ ES  P   A   EK C L+E
Sbjct: 157  SAVELGLMEENVEASMLFVQLPPTMPMIKRSATAVGPEVKESSRPSGGARAIEKTCRLDE 216

Query: 526  LPAGFVGKMLVHKSGAIKLKLGQTLYDVSPGSDCIFPQDVAAINTKEKHCCVLGNLSKRA 347
            LPAG++GK+LV++SGA+KLKLG TLYDVSPG + IF QDV AIN  E+ CCV+  + KR 
Sbjct: 217  LPAGYMGKVLVYRSGAVKLKLGDTLYDVSPGMNSIFAQDVVAINRGEETCCVVAEIEKRV 276

Query: 346  IVTPDVDSLLEQ 311
             + PDVD+++ +
Sbjct: 277  TLIPDVDAIISR 288


>ref|XP_007220771.1| hypothetical protein PRUPE_ppa024519mg [Prunus persica]
            gi|462417233|gb|EMJ21970.1| hypothetical protein
            PRUPE_ppa024519mg [Prunus persica]
          Length = 310

 Score =  251 bits (640), Expect = 6e-64
 Identities = 146/281 (51%), Positives = 179/281 (63%), Gaps = 14/281 (4%)
 Frame = -3

Query: 1117 QTRELLRRVNEGSRRRGSKVERKXXXXP-VQVAFGPSG--ASPSIRTFGR---GISSRSI 956
            +TR  +     G +  G +  +     P V+VAFGP    +S SIRT+G    G + +S 
Sbjct: 24   KTRAPVPAPEVGDKDDGEEARKAEALFPSVRVAFGPGADTSSTSIRTYGTAKDGNTGKSS 83

Query: 955  ESVLQEGSSRSSEPIL----QDLESNDGPDASDXXXXXK-YVECWDYNN-YYPVTLPLRK 794
             S L++     S P L    +D+   D  D        + Y ECWD    YYP TLPLRK
Sbjct: 84   SSGLEDSDDDQSPPTLPEVGKDVSMEDATDVEPLQTVKQRYTECWDSETTYYPTTLPLRK 143

Query: 793  PHSGNPEQLDEEEFGGDS--ANLEYDEDSINHAAELGLMEESEEARMLFLQLPTSLPLVK 620
            P+SG+P  L    F   +  A  EYDE +INHAAELGL+EE  EARMLF+QLPT LPL K
Sbjct: 144  PNSGDPGSLFNGTFNNLNLDAEKEYDESTINHAAELGLLEEKVEARMLFVQLPTILPLTK 203

Query: 619  RSASAKGKEIAESLSPPRRAGTAEKGCSLEELPAGFVGKMLVHKSGAIKLKLGQTLYDVS 440
            RSA+AKGKE   S +     G  +KGCSLEELP G++GKMLV+KSGAIKLKLG TL DVS
Sbjct: 204  RSATAKGKEKVGSSTSLESTGAPKKGCSLEELPGGYMGKMLVYKSGAIKLKLGNTLCDVS 263

Query: 439  PGSDCIFPQDVAAINTKEKHCCVLGNLSKRAIVTPDVDSLL 317
            PGSDC+  +DVA INT+EK CCVLG +S RA+VTP+VDSLL
Sbjct: 264  PGSDCLCDEDVAVINTEEKRCCVLGGISHRAVVTPNVDSLL 304