BLASTX nr result

ID: Akebia23_contig00001864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00001864
         (688 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006388517.1| hypothetical protein POPTR_0167s00240g [Popu...    59   1e-06
ref|XP_002325644.2| hypothetical protein POPTR_0019s14980g [Popu...    59   2e-06
ref|XP_006388515.1| hypothetical protein POPTR_0167s00210g [Popu...    59   2e-06
emb|CAN71712.1| hypothetical protein VITISV_013459 [Vitis vinifera]    57   7e-06

>ref|XP_006388517.1| hypothetical protein POPTR_0167s00240g [Populus trichocarpa]
           gi|550310307|gb|ERP47431.1| hypothetical protein
           POPTR_0167s00240g [Populus trichocarpa]
          Length = 173

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
 Frame = +1

Query: 166 FPSLREMAGSAVNQLSEKLKDSLPLLESTWRFLLQ--IITSLACFSVEKIKQYPYFFGLV 339
           F  +++    AV+    KL D       T +FL    ++  L  F  E +   P    +V
Sbjct: 75  FDLIKKFTADAVSDFIRKLSDL------TKKFLASETVVYVLRWFKKENV---PIMVAVV 125

Query: 340 VVLIVLWKWSGGGSPPKKMMKAPGRDHRMPRNKFEEDPKSYFRGLR 477
           V++++     GG +   K MKAPGR++RMPR+ FE +P +YFR LR
Sbjct: 126 VIVLLFGGCCGGAAKSVKTMKAPGRNYRMPRSNFEANPSAYFRDLR 171


>ref|XP_002325644.2| hypothetical protein POPTR_0019s14980g [Populus trichocarpa]
           gi|550317594|gb|EEF00026.2| hypothetical protein
           POPTR_0019s14980g [Populus trichocarpa]
          Length = 156

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 48/143 (33%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
 Frame = +1

Query: 103 SLFKGLILSKARKTLIVIPLTFPSLREMAGSAVNQLSEKLKDSLP--------------L 240
           SL K  ++S A    I  P      + +A  AV+ L+ KL D +               L
Sbjct: 16  SLIKKFLVSDAVSEYIRSPFDLTK-KFIASDAVSDLTHKLSDQIKKFLASGAVSDFIRKL 74

Query: 241 LESTWRFLLQ--IITSLACFSVEKIKQYPYFFGLVVVLIVLW--KWSGGGSPPKKMMKAP 408
            +   +FL    ++  L  F  EK+   P    +VVV+I+L      GG +   K MKAP
Sbjct: 75  SDLIKKFLAPETVVYVLRWFKKEKV---PIMVAVVVVVILLLFRGCCGGSAKSVKTMKAP 131

Query: 409 GRDHRMPRNKFEEDPKSYFRGLR 477
           GR+ R+PR  FE  P +YFRGLR
Sbjct: 132 GRNSRIPRRNFEASPSAYFRGLR 154


>ref|XP_006388515.1| hypothetical protein POPTR_0167s00210g [Populus trichocarpa]
           gi|550310305|gb|ERP47429.1| hypothetical protein
           POPTR_0167s00210g [Populus trichocarpa]
          Length = 66

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = +1

Query: 283 LACFSVEKIKQYPYFFGLVVVLIVLWKWSGGGSPPKKMMKAPGRDHRMPRNKFEEDPKSY 462
           L  F  E +   P    +VV++++     GG S   K MKAPGR++RMPR+ FE +P +Y
Sbjct: 3   LLTFMTENV---PIMVAVVVIVLLFRGCCGGASKSVKTMKAPGRNYRMPRSNFEANPSAY 59

Query: 463 FRGLR 477
           FRGLR
Sbjct: 60  FRGLR 64


>emb|CAN71712.1| hypothetical protein VITISV_013459 [Vitis vinifera]
          Length = 115

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
 Frame = +1

Query: 187 AGSAVNQLSEKLKDSLPLLESTWRFLLQIITSLACFSV--EKIKQYPY----FFGLVVVL 348
           A S +  + EKLK+ L LLE+   +L+  +  +       EK++ +      F  L +VL
Sbjct: 3   AESVMKFVVEKLKELLVLLENFGGYLVDEVDKVFAPDSRGEKLRHWIQVGAPFLILGLVL 62

Query: 349 IVLWKWSGG---GSPPKKMMKAPGRDHRMPRNKFEEDPKSYFRGLR 477
           +V +    G   G    KMMKAPGRD+RM R  FE +P+ YFRGLR
Sbjct: 63  VVFYYCCCGCCRGRRGVKMMKAPGRDYRMARPPFESNPRGYFRGLR 108


Top