BLASTX nr result
ID: Akebia22_contig00056260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00056260
(400 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 81 2e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 77 2e-12
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 77 3e-12
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 76 5e-12
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 76 5e-12
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 76 5e-12
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 76 5e-12
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana] 75 9e-12
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 75 9e-12
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 74 2e-11
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 74 3e-11
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 73 4e-11
ref|XP_007010939.1| Uncharacterized protein TCM_045057 [Theobrom... 73 5e-11
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 72 6e-11
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 72 8e-11
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 72 8e-11
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 72 1e-10
gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta] 71 1e-10
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 71 2e-10
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 71 2e-10
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 80.9 bits (198), Expect = 2e-13
Identities = 45/114 (39%), Positives = 66/114 (57%)
Frame = -3
Query: 344 IPFKSKLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXX 165
+PF+ T + L+R++ EEIK +F+ P +K GPDGF EFF +
Sbjct: 845 LPFRCSETEHEL--LTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFIL 902
Query: 164 XXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
+FF G L K N T+ ALIPK+ +A ++++ I+ CN IYKVI+KI+AN
Sbjct: 903 AIQSFFAKGFLPKGINTTILALIPKKKEAKEMKDYRPISCCNVIYKVISKIIAN 956
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/114 (35%), Positives = 66/114 (57%)
Frame = -3
Query: 344 IPFKSKLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXX 165
+PF+ + D L+R++ EEIK +F+ P++K GPDG+ EF+ +
Sbjct: 158 LPFRC--SEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVII 215
Query: 164 XXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
+FF G L K N T+ ALIPK+ +A ++++ I+ CN +YK I+KI+AN
Sbjct: 216 AIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILAN 269
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = -3
Query: 314 QFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGK 135
Q VSL E+IK A F+ PRNK SGPDGF EFF + FF GK
Sbjct: 336 QQVSLDTPFSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGK 395
Query: 134 LLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
LLK+ N T LIPK A+ + +F I+ N +YKVI+K++ +
Sbjct: 396 LLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTD 439
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -3
Query: 386 GKVFSP-SIQAASLYIPFKSKLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVE 210
G + SP S++ + + + ++DQ L + +EIK A + PRNK SGPDG+ VE
Sbjct: 274 GSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVE 333
Query: 209 FFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIY 30
FF FF+ G+LLK+ N T LIPK A + F I+ N +Y
Sbjct: 334 FFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLY 393
Query: 29 KVITKIMAN 3
KVI+K++ +
Sbjct: 394 KVISKLLTS 402
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = -3
Query: 302 LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKE 123
L+R + EE + +FA P NKF GPDG+ EFF + +FF G L K
Sbjct: 22 LTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKG 81
Query: 122 CNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N T+ ALIPK+ +A + ++ I+ CN IYKVI+KI+AN
Sbjct: 82 LNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIAN 121
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 75.9 bits (185), Expect = 5e-12
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Frame = -3
Query: 386 GKVFSP-SIQAASLYIPFKSKLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVE 210
G + SP S++ + + + ++DQ L + +EIK A + PRNK SGPDG+ VE
Sbjct: 274 GSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVE 333
Query: 209 FFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIY 30
FF FF+ G+LLK+ N T LIPK A + F I+ N +Y
Sbjct: 334 FFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLY 393
Query: 29 KVITKIMAN 3
KVI+K++ +
Sbjct: 394 KVISKLLTS 402
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/100 (40%), Positives = 59/100 (59%)
Frame = -3
Query: 302 LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKE 123
L+R++ EEIK +F+ P +K GPDGF EFF +FF G L K
Sbjct: 2 LTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKG 61
Query: 122 CNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N T+ ALIPK+ ++ ++++ I+ CN +YKVI+KI+AN
Sbjct: 62 VNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILAN 101
>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
Length = 458
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/109 (35%), Positives = 62/109 (56%)
Frame = -3
Query: 329 KLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNF 150
+ + ++ ++R + EEIK +FA P++K GPD + +EF+ S +F
Sbjct: 181 RCSEEEKTEMTRSVTEEEIKRVLFAMPKDKSLGPDSYTMEFYKSTWDIIGKEFILAIKSF 240
Query: 149 FNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
F G L K N T+ ALIPK+ N ++++ I+ CN I+KVI KI+AN
Sbjct: 241 FVKGFLPKAINSTILALIPKKATTNEMKDYRPISCCNVIFKVILKIIAN 289
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 75.1 bits (183), Expect = 9e-12
Identities = 41/100 (41%), Positives = 59/100 (59%)
Frame = -3
Query: 302 LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKE 123
L+R + EEI+ +FA P NK GPDG+ EFF + +FF G L K
Sbjct: 746 LTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKG 805
Query: 122 CNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N T+ ALIPK+ +A ++++ I+ CN +YKVI+KI+AN
Sbjct: 806 LNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILAN 845
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 73.9 bits (180), Expect = 2e-11
Identities = 40/101 (39%), Positives = 58/101 (57%)
Frame = -3
Query: 305 SLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLK 126
SL R + EEI+ +F P +K GPDG+ EFF + +FF G L K
Sbjct: 448 SLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPK 507
Query: 125 ECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N T+ ALIPK+ +A ++++ I+ CN +YKVI+KI+AN
Sbjct: 508 GINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIAN 548
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 73.6 bits (179), Expect = 3e-11
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = -3
Query: 398 LNYFGKVFSPS--IQAASLYIPFKS-KLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGP 228
+N+F +FS Q S+ I + K+ D F +L ++E+ + NK GP
Sbjct: 222 VNHFRNLFSAHELTQTPSISICNRGPKVPIDCFAALLCPTSKQEVWNVISVMDNNKAPGP 281
Query: 227 DGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIA 48
DGF V FF FF GK+LK+ N + ALIPK +A+++ +F I+
Sbjct: 282 DGFNVLFFKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHFRPIS 341
Query: 47 LCNFIYKVITKIMAN 3
CN +YK+++KI+AN
Sbjct: 342 CCNLLYKIVSKILAN 356
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Frame = -3
Query: 398 LNYFGKVFSPSIQAASLY-IPFKSKLTRDQFVSLSRLIIREE-----IKYAVFASPRNKF 237
+++F ++F S S I + LTR + +R ++ E IK FA P NK
Sbjct: 404 VDFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKS 463
Query: 236 SGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFW 57
GPDG+ EFF FF G+LL + N T ++PK+P A+R+ F
Sbjct: 464 PGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFR 523
Query: 56 LIALCNFIYKVITKIMA 6
I+ CN IYKVI+K++A
Sbjct: 524 PISCCNAIYKVISKLLA 540
>ref|XP_007010939.1| Uncharacterized protein TCM_045057 [Theobroma cacao]
gi|508727852|gb|EOY19749.1| Uncharacterized protein
TCM_045057 [Theobroma cacao]
Length = 533
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/101 (36%), Positives = 55/101 (54%)
Frame = -3
Query: 305 SLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLK 126
+L LI EE+K+A+++ +K GPDGF + FF + +F GKL K
Sbjct: 113 NLEALISMEELKFAIWSCDGSKAPGPDGFNLNFFKHYWSFIKSELFDFISDFMTRGKLDK 172
Query: 125 ECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N + ALIPK P L +W I+L N +YK++ K++AN
Sbjct: 173 GINSSFIALIPKTPNPTALTEYWPISLINSLYKILAKLLAN 213
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/109 (36%), Positives = 62/109 (56%)
Frame = -3
Query: 329 KLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNF 150
K+ + L+ + +EEIK VF+ P++K GPDG+ EF+ + +F
Sbjct: 555 KVAEEDKGMLTTEVTKEEIKRVVFSMPKDKSLGPDGYRTEFYKATWDIIGEEFVLAIKSF 614
Query: 149 FNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
F G L K N T+ ALIPK+ + ++++ I+ CN IYKVI+KI+AN
Sbjct: 615 FEKGFLPKGVNSTILALIPKKLEEIEMKDYRPISCCNVIYKVISKIIAN 663
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 72.0 bits (175), Expect = 8e-11
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = -3
Query: 368 SIQAASLYIPFKSKLTRDQFVS--LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSF 195
S++ +PF+ D F++ L+ + EEI +F+ PRNK GPDGF VEFF+
Sbjct: 466 SVEKIKGLLPFRC----DSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEA 521
Query: 194 XXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITK 15
FF G L + N T LIPK A+RL F +A C IYKVIT+
Sbjct: 522 WAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITR 581
Query: 14 IMA 6
I++
Sbjct: 582 IIS 584
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 72.0 bits (175), Expect = 8e-11
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = -3
Query: 368 SIQAASLYIPFKSKLTRDQFVS--LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSF 195
S++ +PF+ D F++ L+ + EEI +F+ PRNK GPDGF VEFF+
Sbjct: 423 SVEKIKGLLPFRC----DSFLASQLTTIPSEEEITQVLFSMPRNKAPGPDGFPVEFFIEA 478
Query: 194 XXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIALCNFIYKVITK 15
FF G L + N T LIPK A+RL F +A C IYKVIT+
Sbjct: 479 WAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITR 538
Query: 14 IMA 6
I++
Sbjct: 539 IIS 541
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = -3
Query: 398 LNYFGKVFSP--SIQAASLYIPFKSKLTRDQFVSLSRLIIREEIKYAVFASPRNKFSGPD 225
+NYF +FS S + + + ++T + +L + EEIK A+F +K GPD
Sbjct: 753 VNYFQHLFSSTGSSEYTEVVDGVRGRVTEEMNQALLAVFTPEEIKIALFQMHPSKAPGPD 812
Query: 224 GFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKEPKANRLENFWLIAL 45
GF F+ + L+FF GKLLK NFT ALIPK + + I+L
Sbjct: 813 GFSPFFYQKYWPIVGEDVVAAVLHFFKTGKLLKRINFTHVALIPKVHEPKNMMQLRPISL 872
Query: 44 CNFIYKVITKIM 9
CN +YK+ K++
Sbjct: 873 CNVLYKIGAKVL 884
>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
Length = 671
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/93 (41%), Positives = 52/93 (55%)
Frame = -3
Query: 281 EEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKA 102
EEIK+ +F+ P+NK SGPDGF EFF + ++F G + + N T
Sbjct: 414 EEIKHTLFSMPKNKSSGPDGFTPEFFQASWAIIGPEFVIAFQSYFLHGFMPRGVNATTLT 473
Query: 101 LIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
LIPK L ++ IA CN IYKVI+KI+AN
Sbjct: 474 LIPKVEGPTTLTDYRPIACCNVIYKVISKILAN 506
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/87 (44%), Positives = 49/87 (56%)
Frame = -3
Query: 266 AVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKECNFTLKALIPKE 87
A+F+ PRNK GPDGF VEFF+ FF G LLK N T LIPK
Sbjct: 2 ALFSMPRNKAPGPDGFPVEFFLEAWPIVKESFIAAIKEFFLTGHLLKGFNATAITLIPKV 61
Query: 86 PKANRLENFWLIALCNFIYKVITKIMA 6
P A++L F +A C IYKVIT++++
Sbjct: 62 PGADQLNLFRPVACCTTIYKVITRLIS 88
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = -3
Query: 302 LSRLIIREEIKYAVFASPRNKFSGPDGFCVEFFMSFXXXXXXXXXXXXLNFFNCGKLLKE 123
L+R + EEIK +F+ P++K GPDG+ EF+ + +FF G L K
Sbjct: 96 LTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKG 155
Query: 122 CNFTLKALIPKEPKANRLENFWLIALCNFIYKVITKIMAN 3
N + ALIPK+ A + ++ I+ CN +YKVI+KI+AN
Sbjct: 156 INSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIAN 195