BLASTX nr result

ID: Akebia22_contig00056194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00056194
         (389 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004487840.1| PREDICTED: putative E3 ubiquitin-protein lig...    62   1e-07
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu...    58   2e-06
ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...    57   2e-06
ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein lig...    57   3e-06
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]    57   3e-06

>ref|XP_004487840.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Cicer
           arietinum]
          Length = 1276

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/102 (36%), Positives = 58/102 (56%)
 Frame = +3

Query: 3   SGDDVIDEMTKQLARTYKDRLVYYQVVLYGETTQWNFGCRVAPLLDDESQCFIYGNSTSS 182
           S +D+ +E  K++AR YK+ LVYYQV+LYGET  W+           ES  ++  ++TS 
Sbjct: 185 SEEDINEETVKEMARRYKECLVYYQVMLYGETPWWS---------SKESTSYMDVSNTSC 235

Query: 183 EYVDSVERQNGWTKFHDGEKAHPLELQEDRIDEMEDRAKASI 308
               SV+ ++     +  EK HP++ Q D +D+ME  +K  I
Sbjct: 236 VSSTSVQHESRLKTCNTYEKVHPIDPQ-DVMDKMEQESKQFI 276


>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223544025|gb|EEF45551.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 1357

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 18  IDEMTKQLARTYKDRLVYYQVVLYGETTQWNFGCRVAPLLDDESQCF--IYGNSTSSEYV 191
           I++  +++AR YK  L YYQV+LYGET QW+  CR +   +DESQ F  +  +S SSE +
Sbjct: 203 INDAIREIARRYKHWLTYYQVMLYGETPQWH--CRSS--YNDESQDFWQVSNSSDSSELI 258

Query: 192 DSVERQNGWTKFHDGEKAHPLELQEDRIDEMEDRAK 299
           +    Q   ++ +  EK HPL+ +    ++  D+ K
Sbjct: 259 E----QERCSQTYKHEKVHPLDSKAYPANDKADKPK 290


>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1339

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +3

Query: 24  EMTKQLARTYKDRLVYYQVVLYGETTQWNFGCR-VAPLLDDESQCFIYGNSTSSEYVDSV 200
           E  ++ A+ YK  L+YYQV+ YGET Q   G   +   +D      +YG S+S++   S+
Sbjct: 206 EAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSMYGKSSSTKSSSSI 265

Query: 201 ERQN-GWTKFHDGEKAHPLELQEDRIDEMEDRAKASIITTKQKNTATRDDGRTL 359
              N     + + +K HPL+ QE  ID   D+AKAS     + NT  +D  + L
Sbjct: 266 AHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKAS-----RDNTEIQDYRKAL 314


>ref|XP_004296849.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like
           [Fragaria vesca subsp. vesca]
          Length = 1331

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = +3

Query: 21  DEMTKQLARTYKDRLVYYQVVLYGETTQ-WNFGCRVAPLLDDESQCFIYGNSTSSEYVDS 197
           DE T Q+AR Y+D L+YY+V+LYGET Q    G R     D ES   ++G S   +Y + 
Sbjct: 208 DEATMQMARIYRDWLMYYKVMLYGETPQGQGGGYRDILSPDKESIYSLHGRSNRLDYSNK 267

Query: 198 VERQ-NGWTKFHDGEKAHPLELQEDRIDEMEDRAKASI 308
              + N  T+++ G K HPL+  ED I  +ED  K SI
Sbjct: 268 TGHEYNLHTQWNYG-KVHPLDPHEDSI--IEDGLKTSI 302


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
 Frame = +3

Query: 24  EMTKQLARTYKDRLVYYQVVLYGETTQWNFGCR-VAPLLDDESQCFIYGNSTSSEYVDSV 200
           E  ++ A+ YK  L+YYQV+ YGET Q   G   +   +D       YG S+S++   S+
Sbjct: 206 EAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDILSPVDQSPYNSXYGKSSSTKSSSSI 265

Query: 201 ERQN-GWTKFHDGEKAHPLELQEDRIDEMEDRAKASIITTKQKNTATRDDGRTL 359
              N     + + +K HPL+ QE  ID   D+AKAS     + NT  +D  + L
Sbjct: 266 AHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKAS-----RDNTEIQDYRKAL 314


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