BLASTX nr result

ID: Akebia22_contig00056004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00056004
         (344 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   185   5e-45
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   162   3e-38
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   162   4e-38
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   162   4e-38
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     161   8e-38
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]           161   1e-37
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               159   3e-37
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                159   3e-37
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     159   4e-37
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         159   5e-37
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]           159   5e-37
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        157   1e-36
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     156   3e-36
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   156   3e-36
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   153   2e-35
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...   153   3e-35
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   153   3e-35
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   149   3e-34
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...   149   5e-34
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   149   5e-34

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  185 bits (470), Expect = 5e-45
 Identities = 87/113 (76%), Positives = 99/113 (87%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGV+ERMN+ L+EKVRCMLSNA L + FWAEAVTYA HL+NRLP++A +GKTP+EVWS 
Sbjct: 570 QNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVTYAQHLVNRLPSSAIDGKTPLEVWSG 629

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKK 6
            PATDYDSLH+FG  AY+HV ESKLDPRAKKALF+GFS GVKGYRLWC E KK
Sbjct: 630 KPATDYDSLHVFGSIAYYHVIESKLDPRAKKALFMGFSPGVKGYRLWCLEAKK 682


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score =  162 bits (411), Expect = 3e-38
 Identities = 77/114 (67%), Positives = 92/114 (80%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWAEAV+ AC+LINR P+ A + KTPI+VWS 
Sbjct: 553 QNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSG 612

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV  SKL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 613 SPA-NYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 665


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  162 bits (410), Expect = 4e-38
 Identities = 76/114 (66%), Positives = 91/114 (79%)
 Frame = -1

Query: 344  QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
            QNGVAERMNRT++ K RC+LSNAGL K FWAEAV+ AC+LINR P+ A + KTPIEVWS 
Sbjct: 799  QNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 858

Query: 164  TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
            +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 859  SPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 911


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  162 bits (410), Expect = 4e-38
 Identities = 76/114 (66%), Positives = 91/114 (79%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RC+LSNAGL K FWAEAV+ AC+LINR P+ A + KTPIEVWS 
Sbjct: 592 QNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 651

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 652 SPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 704


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  161 bits (408), Expect = 8e-38
 Identities = 76/114 (66%), Positives = 90/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QN VAERMNRT++ K RCMLSNAGL K FWAEAV+ AC+LINR P  A + KTPIEVWS 
Sbjct: 564 QNDVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSG 623

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +P T+Y  L +FGC AY HV   KL+PRA K +FLG+++GVKGY+LWCPE KKV
Sbjct: 624 SP-TNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPETKKV 676


>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
          Length = 1009

 Score =  161 bits (407), Expect = 1e-37
 Identities = 76/114 (66%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWAEAV+ AC+LINR P+ A + KTPIEVWS 
Sbjct: 413 QNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSS 472

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA  Y  L +F C AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 473 SPA-KYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 525


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  159 bits (403), Expect = 3e-37
 Identities = 75/114 (65%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWAEAV+ AC+LINR P  A + KTPI+VWS 
Sbjct: 409 QNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSG 468

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PR  K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 469 SPA-NYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKV 521


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  159 bits (403), Expect = 3e-37
 Identities = 75/114 (65%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWAEAV+ AC+LINR P  A + KTPI+VWS 
Sbjct: 577 QNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSG 636

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PR  K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 637 SPA-NYSDLKVFGCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPETKKV 689


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  159 bits (402), Expect = 4e-37
 Identities = 75/114 (65%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNA L K FWAEAV+ AC+LINR P+ A + KTPIEVWS 
Sbjct: 501 QNGVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 560

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PR  K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 561 SPA-NYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPETKKV 613


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  159 bits (401), Expect = 5e-37
 Identities = 75/114 (65%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWA AV+  C+LINR P+ A + KTPI+VWS 
Sbjct: 420 QNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSG 479

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
            PA +Y  L +FGC AY HV   KL+PRA K +FLG+S+GVKGY+LWCPE KKV
Sbjct: 480 FPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKV 532


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score =  159 bits (401), Expect = 5e-37
 Identities = 75/114 (65%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNAGL K FWA AV+  C+LINR P+ A + KTPI+VWS 
Sbjct: 420 QNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSG 479

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
            PA +Y  L +FGC AY HV   KL+PRA K +FLG+S+GVKGY+LWCPE KKV
Sbjct: 480 FPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPETKKV 532


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  157 bits (398), Expect = 1e-36
 Identities = 76/114 (66%), Positives = 90/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNR ++ K RCMLSNAGL K FWAEAV+ AC+LINR P+ AN+ KTPIEVWS 
Sbjct: 592 QNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYANK-KTPIEVWSG 650

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ + VKGY+LWCPE KKV
Sbjct: 651 SPA-NYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPETKKV 703


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  156 bits (394), Expect = 3e-36
 Identities = 73/114 (64%), Positives = 87/114 (76%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMN  ++ K RCMLSNA L K FWAEAV+  C+LINR P+ A + KTPIEVWS 
Sbjct: 627 QNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSG 686

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 687 SPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 739


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  156 bits (394), Expect = 3e-36
 Identities = 73/114 (64%), Positives = 87/114 (76%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMN  ++ K RCMLSNA L K FWAEAV+  C+LINR P+ A + KTPIEVWS 
Sbjct: 627 QNGVAERMNMAIISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSG 686

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 687 SPA-NYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 739


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  153 bits (387), Expect = 2e-35
 Identities = 71/114 (62%), Positives = 88/114 (77%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGV ERMNRT++ K RCMLSNAGL + FWAEA + AC+LINR P+ A + KTPIE+WS 
Sbjct: 531 QNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIEMWSG 590

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVK Y+LWCPE +KV
Sbjct: 591 SPA-NYSDLKVFGCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWCPETQKV 643


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score =  153 bits (386), Expect = 3e-35
 Identities = 73/114 (64%), Positives = 87/114 (76%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERM RT++ K RCML   GL K FWAEAV+ AC+LINR P+ A + KTPIEVWS 
Sbjct: 627 QNGVAERMKRTIISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 686

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
           +PA +Y  L +FGC AY HV   KL+PRA K +FLG+ +GVKGY+LWCPE KKV
Sbjct: 687 SPA-NYSDLRVFGCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPETKKV 739


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  153 bits (386), Expect = 3e-35
 Identities = 72/114 (63%), Positives = 89/114 (78%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMN+TLLE+ RCMLSNAGLD+ FWAEAV+ AC+LINR P    + KTP+E+WS 
Sbjct: 570 QNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWS- 628

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKKV 3
             A DY +L  FGC AY+HV E KL+PRAKK +F+G+  GVKG+R+W P  K+V
Sbjct: 629 GKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRV 682


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53370655|gb|AAU89150.1| integrase core domain
           containing protein [Oryza sativa Japonica Group]
           gi|108710286|gb|ABF98081.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1322

 Score =  149 bits (377), Expect = 3e-34
 Identities = 71/113 (62%), Positives = 83/113 (73%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNA ++K FWAEA   AC+LINR P+     KTPIE+WS 
Sbjct: 585 QNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSG 644

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKK 6
            PA DY  L +FGC AY HV   KL+PRA K LFLG+ +GVKGY+LW PE  K
Sbjct: 645 MPA-DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 696


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/113 (62%), Positives = 83/113 (73%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ K RCMLSNA ++K FWAEA   AC+LIN+ P+     KTPIEVWS 
Sbjct: 513 QNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINKSPSIPLNKKTPIEVWSG 572

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKK 6
            PA DY  L +FGC AY HV   KL+PRA K LFLG+ +GVKGY+LW PE  K
Sbjct: 573 MPA-DYSQLRVFGCTAYAHVDNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 624


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  149 bits (375), Expect = 5e-34
 Identities = 71/113 (62%), Positives = 85/113 (75%)
 Frame = -1

Query: 344 QNGVAERMNRTLLEKVRCMLSNAGLDKVFWAEAVTYACHLINRLPAAANEGKTPIEVWSE 165
           QNGVAERMNRT++ + RCMLS+A ++K FWAEA + AC+LINR P+     KTPIEVWS 
Sbjct: 584 QNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG 643

Query: 164 TPATDYDSLHIFGCPAYFHVKESKLDPRAKKALFLGFSTGVKGYRLWCPELKK 6
           TPA DY  L +FGC AY HV   KL+PRA K LFLG+ +GVKGY+LW PE  K
Sbjct: 644 TPA-DYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKLWNPETGK 695


Top