BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00055983
         (305 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...    58   2e-06
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...    58   2e-06
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      58   2e-06
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]    55   8e-06

>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = +2

Query: 44  SLSFVFLRYSPSHKGYKCLHIPTNHLNIS*HVTFNEESFPFAAI 175
           S + VFL Y  SHKG++CL I T HL IS HV F+E++FPFAA+
Sbjct: 278 SAACVFLGYPASHKGFRCLDISTRHLYISRHVVFDEQTFPFAAV 321


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
           gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
           [Oryza sativa Japonica Group]
          Length = 841

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +2

Query: 44  SLSFVFLRYSPSHKGYKCLHIPTNHLNIS*HVTFNEESFPFAAI 175
           S  +VFL YS SHKG++CL I T  L IS HV F+E++FPFAAI
Sbjct: 95  SAPYVFLGYSASHKGFRCLDISTRRLYISRHVVFDEKTFPFAAI 138


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +2

Query: 44  SLSFVFLRYSPSHKGYKCLHIPTNHLNIS*HVTFNEESFPFAAI 175
           S  +VFL YS SHKG++CL I T  L IS HV F+E++FPFAAI
Sbjct: 734 SAPYVFLGYSASHKGFRCLDISTRRLYISRHVVFDEKTFPFAAI 777


>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
          Length = 1207

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
 Frame = +2

Query: 35  TSWSLSFVFLRYSPSHKGYKCLHIPTNHLNIS*HVTFNEESF---------PFAAIQTTR 187
           TSW +  +FL YSPSHKG++CL   T+ L I+ H  F+E  F         P +++  + 
Sbjct: 593 TSWCIPCIFLGYSPSHKGFRCLEPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISN 652

Query: 188 FLCDVTSHPYCPCLPILTI*CPHHLHNYPSLLLSQPP 298
           FL +   H   P  P  T   PH   +  S   S PP
Sbjct: 653 FL-EPRLHHIDPSPPSXTFPSPHIPRSNSSPCSSLPP 688