BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00055731
         (265 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab...    72   6e-11
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    66   4e-09
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...    63   4e-08
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    63   4e-08
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript...    62   6e-08
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    62   1e-07
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               61   1e-07
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript...    61   1e-07
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   61   1e-07
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part...    60   2e-07
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    60   2e-07
gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]              60   3e-07
gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thali...    60   3e-07
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    60   3e-07
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          60   3e-07
gb|ABK28152.1| unknown [Arabidopsis thaliana]                          60   3e-07
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali...    60   3e-07
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    60   4e-07
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            60   4e-07
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    60   4e-07

>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
           lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
           ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = +2

Query: 8   LKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPE 187
           L++   +V WH  VWFP  + R+S   WL +   L T   ++A GV Q   C FCR   E
Sbjct: 72  LRKAKHKVLWHNSVWFPQRVPRYSFIVWLAVKDQLSTGTRMRAWGVEQP--CVFCRERDE 129

Query: 188 SEDHLFLGCNFSHDLW----QRMLRRSNIP 265
           S DHLF  C F++ +W     R+LRR   P
Sbjct: 130 SRDHLFFACPFTYSIWSELTSRLLRRKLNP 159


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/83 (34%), Positives = 44/83 (53%)
 Frame = +2

Query: 2   KALKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNH 181
           +AL+     V WH  VWF N + +H+  +W+     L T+D L++ G+I  + C  C   
Sbjct: 571 RALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNLV 630

Query: 182 PESEDHLFLGCNFSHDLWQRMLR 250
            E+ DHLF  C FS  +W   +R
Sbjct: 631 DETRDHLFFACRFSSRIWTFFMR 653


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
            thaliana]
          Length = 1253

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 43/84 (51%)
 Frame = +2

Query: 2    KALKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNH 181
            +A++   P   W   VWF  ++ +H+   W+     L T+  L A GV   + CC C + 
Sbjct: 911  EAMRPKKPVKDWTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSR 970

Query: 182  PESEDHLFLGCNFSHDLWQRMLRR 253
            PES DHL L C FS  +W+ +  R
Sbjct: 971  PESRDHLLLYCVFSAVIWKLVFFR 994


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 23   PQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHL 202
            PQ  W+  VWFP +  ++S   WL +   L T D +KA    Q   C  C N  E+ DHL
Sbjct: 1350 PQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVTCTLCNNAEETRDHL 1409

Query: 203  FLGCNFSHDLWQRMLRR 253
            F  C ++  +W+ + +R
Sbjct: 1410 FFSCQYTSYVWEALTQR 1426


>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 320

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 26/78 (33%), Positives = 42/78 (53%)
 Frame = +2

Query: 29  VRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLFL 208
           V W+  VWF N++ +H+   W+     L T+D L++ G+   + C  C +H ES  HLF 
Sbjct: 149 VPWYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFF 208

Query: 209 GCNFSHDLWQRMLRRSNI 262
            C F   +W+    R+N+
Sbjct: 209 ECPFCGAVWRFFTGRANL 226


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/70 (34%), Positives = 37/70 (52%)
 Frame = +2

Query: 26  QVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLF 205
           +V W   +WF   I +H+  AW+ +   L T+D + + G I    C FC  H E+  HLF
Sbjct: 40  RVDWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLF 99

Query: 206 LGCNFSHDLW 235
             C F+ ++W
Sbjct: 100 FDCEFAREVW 109


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +2

Query: 8    LKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPE 187
            L+ +   V WH  VWF +++ + +   W+     L T+D L+  G      C  C +  E
Sbjct: 977  LQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDE 1036

Query: 188  SEDHLFLGCNFSHDLWQRMLRRSNI 262
            S +HLF  C FS ++W   +R  N+
Sbjct: 1037 SREHLFFRCQFSSEIWSFFMRALNL 1061


>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 289

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +2

Query: 5   ALKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHP 184
           A++   P++ W   VWF   + +H+   W+     L T+  L + G IQ+  CC C    
Sbjct: 117 AIRPRAPELDWAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIET 176

Query: 185 ESEDHLFLGCNFSHDLWQRMLRR 253
           ES DHL   C F+  +W+    R
Sbjct: 177 ESRDHLLFSCEFAAQVWRLAFSR 199


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/68 (36%), Positives = 37/68 (54%)
 Frame = +2

Query: 35  WHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLFLGC 214
           W ++VWFP  I RH+   W  +   L T+D L+  G+  ++ C  C    ES  HLF GC
Sbjct: 428 WSSIVWFPLAIPRHAFLHWQVMLFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGC 487

Query: 215 NFSHDLWQ 238
            ++  LW+
Sbjct: 488 TYASHLWR 495


>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
           gi|482569649|gb|EOA33837.1| hypothetical protein
           CARUB_v10021318mg, partial [Capsella rubella]
          Length = 290

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/71 (36%), Positives = 38/71 (53%)
 Frame = +2

Query: 23  PQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHL 202
           P V W   VWF   I +H+  +W+ +   L T+D L+  G+   S C  C +  ES  HL
Sbjct: 109 PLVPWFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHL 168

Query: 203 FLGCNFSHDLW 235
           F  C +SH++W
Sbjct: 169 FFECAYSHEVW 179


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +2

Query: 32   RWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKA--RGVIQNSCCCFCRNHPESEDHLF 205
            +WH  +WF     + +  +WL     L T D + +  RG+  +S C  C    ES DHLF
Sbjct: 1238 QWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGI--SSVCVLCNISAESRDHLF 1295

Query: 206  LGCNFSHDLWQRMLRR 253
              CNFS  +W R+ RR
Sbjct: 1296 FSCNFSSHIWDRLTRR 1311


>gb|AAF79357.1|AC007887_16 F15O4.34 [Arabidopsis thaliana]
          Length = 236

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
 Frame = +2

Query: 11  KETIPQVR-------WHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCF 169
           KET+  +R       W+  VWF ++  ++S   WL +   L T D +      Q++ C  
Sbjct: 87  KETLNHMRTISMDVDWYKGVWFGHSTPKYSFCVWLAVLNRLSTGDRMTHWNGGQSAACVL 146

Query: 170 CRNHPESEDHLFLGCNFSHDLWQRMLR 250
           C N PE+ DHLF  C+F+  +W  + R
Sbjct: 147 CHNAPETRDHLFFSCDFASIVWSNLAR 173


>gb|ABE65413.1| hypothetical protein At1g62890 [Arabidopsis thaliana]
          Length = 195

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/77 (32%), Positives = 41/77 (53%)
 Frame = +2

Query: 23  PQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHL 202
           PQ  W+  VWFP +  ++S   WL +   L T D +KA    Q   C  C N  E+ + L
Sbjct: 17  PQTNWYKGVWFPYSTPKYSFLLWLTIQNRLSTGDHIKAWNSGQQVTCTLCGNAEETRNLL 76

Query: 203 FLGCNFSHDLWQRMLRR 253
           F  C+++ ++W+ + +R
Sbjct: 77  FFSCHYTSEVWRTLTQR 93


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 29  VRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLFL 208
           V WH  VWF N++ +H+   W+     L T+D L+  G+   + C  C  H +S  HLF 
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186

Query: 209 GCNFSHDLWQRMLRRSNI 262
            C FS  +W+     +N+
Sbjct: 187 ECQFSGVVWRFFTASTNL 204


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 29  VRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLFL 208
           V WH  VWF N++ +H+   W+     L T+D L+  G+   + C  C  H +S  HLF 
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186

Query: 209 GCNFSHDLWQRMLRRSNI 262
            C FS  +W+     +N+
Sbjct: 187 ECQFSGVVWRFFTASTNL 204


>gb|ABK28152.1| unknown [Arabidopsis thaliana]
          Length = 196

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/77 (32%), Positives = 41/77 (53%)
 Frame = +2

Query: 23  PQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHL 202
           PQ  W+  VWFP +  ++S   WL +   L T D +KA    Q   C  C N  E+ + L
Sbjct: 17  PQTNWYKGVWFPYSTPKYSFLLWLTIQNRLSTGDHIKAWNSGQQVTCTLCGNAEETRNLL 76

Query: 203 FLGCNFSHDLWQRMLRR 253
           F  C+++ ++W+ + +R
Sbjct: 77  FFSCHYTSEVWRTLTQR 93


>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
          Length = 296

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 29  VRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNHPESEDHLFL 208
           V WH  VWF N++ +H+   W+     L T+D L+  G+   + C  C  H +S  HLF 
Sbjct: 127 VPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFF 186

Query: 209 GCNFSHDLWQRMLRRSNI 262
            C FS  +W+     +N+
Sbjct: 187 ECQFSGVVWRFFTASTNL 204


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/84 (30%), Positives = 42/84 (50%)
 Frame = +2

Query: 2    KALKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNH 181
            + L+   P  RW   VWF   + +H+   W      L T+  L + G++ ++ CC C   
Sbjct: 899  EVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFD 958

Query: 182  PESEDHLFLGCNFSHDLWQRMLRR 253
             E+ DHL L C+FS  +W+ +  R
Sbjct: 959  TETRDHLLLLCDFSSQVWRMVFLR 982


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/84 (30%), Positives = 42/84 (50%)
 Frame = +2

Query: 2    KALKETIPQVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQDMLKARGVIQNSCCCFCRNH 181
            + L+   P  RW   VWF   + +H+   W      L T+  L + G++ ++ CC C   
Sbjct: 899  EVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLVSWGLVSSAECCLCSFD 958

Query: 182  PESEDHLFLGCNFSHDLWQRMLRR 253
             E+ DHL L C+FS  +W+ +  R
Sbjct: 959  TETRDHLLLLCDFSSQVWRMVFLR 982


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = +2

Query: 26   QVRWHTLVWFPNNIKRHSATAWLCLSKGLKTQD--MLKARGVIQNSCCCFCRNHPESEDH 199
            +V WH  VWF ++  + S   WL +   L T D  +L  RG+     C  CRN  ES DH
Sbjct: 1279 EVPWHKGVWFTHSTPKFSFCVWLAVYDRLSTGDKMLLWNRGL--QGTCLLCRNATESRDH 1336

Query: 200  LFLGCNFSHDLWQ 238
            LF  C+FS ++W+
Sbjct: 1337 LFFSCSFSSEVWE 1349