BLASTX nr result
ID: Akebia22_contig00055500
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00055500
(449 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [... 54 3e-11
dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11
dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11
dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11
ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] g... 54 3e-11
ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ... 52 2e-10
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 54 2e-10
gb|ADD30912.1| putative RF1 protein [Ximenia americana] 50 2e-10
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy... 57 4e-09
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 44 7e-09
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 52 7e-09
gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua] 53 2e-08
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 47 2e-08
gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ... 48 3e-08
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 48 3e-08
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 48 3e-08
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 48 3e-08
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 48 3e-08
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34... 48 3e-08
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 48 3e-08
>ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia]
gi|586947471|gb|AHJ91268.1| hypothetical chloroplast RF1
(chloroplast) [Vitis rotundifolia]
Length = 1893
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
+N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025
>dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
+N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025
>dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
+N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025
>dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
caucasica]
Length = 1893
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
+N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025
>ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera]
gi|118577986|sp|Q0ZIW0.1|YCF1_VITVI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|91701709|gb|ABE47593.1| hypothetical chloroplast RF1
[Vitis vinifera]
Length = 1893
Score = 54.3 bits (129), Expect(2) = 3e-11
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
+N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079
Score = 39.3 bits (90), Expect(2) = 3e-11
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025
>ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense]
gi|403226837|gb|AFR25716.1| hypothetical chloroplast RF19
(chloroplast) [Penthorum chinense]
Length = 1805
Score = 51.6 bits (122), Expect(2) = 2e-10
Identities = 29/46 (63%), Positives = 33/46 (71%)
Frame = -3
Query: 264 TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
+ SN IHESSIQI SMD TN L E + +DL D TSTIRK+IE I
Sbjct: 988 SNSNQMIHESSIQIVSMDWTNYSLTEKKKKDLTDRTSTIRKEIEQI 1033
Score = 39.3 bits (90), Expect(2) = 2e-10
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL+K+ PILLFGL E+Y+SSE
Sbjct: 955 IIKELSKINPILLFGLSEIYESSE 978
>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
Length = 1909
Score = 53.9 bits (128), Expect(2) = 2e-10
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN IHESSIQIRSMD TN L E +++DL D TSTIR +IE I
Sbjct: 1053 SNRMIHESSIQIRSMDWTNYSLTEKKMKDLTDRTSTIRNQIERI 1096
Score = 36.6 bits (83), Expect(2) = 2e-10
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I KEL+K PILLF LREVY+SSE
Sbjct: 1020 ITKELSKANPILLFRLREVYESSE 1043
>gb|ADD30912.1| putative RF1 protein [Ximenia americana]
Length = 1895
Score = 50.1 bits (118), Expect(2) = 2e-10
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN IHESSIQ RSMD T LL E +++DL D T+TIR +IE I
Sbjct: 1045 SNRMIHESSIQNRSMDWTKYLLTEKKMKDLTDRTNTIRNQIEII 1088
Score = 40.4 bits (93), Expect(2) = 2e-10
Identities = 19/24 (79%), Positives = 22/24 (91%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+K L+KV PILLFGLREVY+SSE
Sbjct: 1012 IIKNLSKVNPILLFGLREVYESSE 1035
>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
[Buxus microphylla]
Length = 1859
Score = 57.0 bits (136), Expect(2) = 4e-09
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN IHESSI+IRSMD TN LL E +++DL D T+TIRKKIE I
Sbjct: 1009 SNQMIHESSIRIRSMDWTNSLLTEKKMKDLTDRTNTIRKKIERI 1052
Score = 29.3 bits (64), Expect(2) = 4e-09
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KEL K+ LFGLREVY SSE
Sbjct: 980 IIKELNKI----LFGLREVYDSSE 999
>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
[Platanus occidentalis]
Length = 1915
Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -3
Query: 267 TTRSNLFIHESSIQIRSMD*TN*L--LAENQIQDLADWTSTIRKKIETI 127
T SN IHES I+IRS D TN L E ++++LAD TSTIR +IE I
Sbjct: 1045 TIISNQIIHESPIRIRSTDWTNYYYSLTEKKMKNLADRTSTIRNQIERI 1093
Score = 42.0 bits (97), Expect(2) = 7e-09
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KELAK+ PILLFGL+EVY+SSE
Sbjct: 1010 IMKELAKINPILLFGLKEVYESSE 1033
>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
(chloroplast) [Liquidambar formosana]
Length = 1878
Score = 51.6 bits (122), Expect(2) = 7e-09
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -3
Query: 264 TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
+ SN IHESSIQ RSMD TN L E + +DL D TSTIR +IE I
Sbjct: 1037 SNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1082
Score = 33.9 bits (76), Expect(2) = 7e-09
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I + L+K+ PI LFGLREVY+SSE
Sbjct: 1004 IKRILSKINPIQLFGLREVYESSE 1027
>gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]
Length = 1882
Score = 52.8 bits (125), Expect(2) = 2e-08
Identities = 31/60 (51%), Positives = 36/60 (60%)
Frame = -3
Query: 306 YTNQVKIKMGKLYTTRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
Y + K L + SN IHESSIQ RSMD TN L E + +DL D TSTIR +IE I
Sbjct: 1030 YESSETKKEKDLIISNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1089
Score = 31.2 bits (69), Expect(2) = 2e-08
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2
Query: 349 LAKVYPILLFGLREVYKSSE 290
L+K PI LFGLREVY+SSE
Sbjct: 1015 LSKRNPIQLFGLREVYESSE 1034
>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
[Liriodendron tulipifera]
Length = 1835
Score = 46.6 bits (109), Expect(2) = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
+N HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 994 NNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1037
Score = 37.4 bits (85), Expect(2) = 2e-08
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PILLFGLR+VY+ +E
Sbjct: 963 IIKEFAKVNPILLFGLRKVYEPNE 986
>gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
photosystem I assembly protein Ycf1 (chloroplast)
[Magnolia officinalis subsp. biloba]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
(chloroplast) [Magnolia officinalis]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
Ycf1 [Magnolia denudata]
Length = 1863
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013
>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
Length = 1858
Score = 47.8 bits (112), Expect(2) = 3e-08
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = -3
Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I
Sbjct: 1015 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1058
Score = 35.8 bits (81), Expect(2) = 3e-08
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -2
Query: 361 ILKELAKVYPILLFGLREVYKSSE 290
I+KE AKV PI LFGLR+VY+ +E
Sbjct: 984 IIKEFAKVNPIFLFGLRKVYEPNE 1007