BLASTX nr result
ID: Akebia22_contig00055500
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00055500 (449 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [... 54 3e-11 dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11 dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11 dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti... 54 3e-11 ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] g... 54 3e-11 ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ... 52 2e-10 gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] 54 2e-10 gb|ADD30912.1| putative RF1 protein [Ximenia americana] 50 2e-10 ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy... 57 4e-09 ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident... 44 7e-09 ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ... 52 7e-09 gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua] 53 2e-08 ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli... 47 2e-08 gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ... 48 3e-08 gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)... 48 3e-08 ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop... 48 3e-08 ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [... 48 3e-08 gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)... 48 3e-08 ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34... 48 3e-08 ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ... 48 3e-08 >ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia] gi|586947471|gb|AHJ91268.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia] Length = 1893 Score = 54.3 bits (129), Expect(2) = 3e-11 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124 +N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+ Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ P LLFGLREVY+SSE Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025 >dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp. caucasica] Length = 1893 Score = 54.3 bits (129), Expect(2) = 3e-11 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124 +N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+ Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ P LLFGLREVY+SSE Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025 >dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp. caucasica] Length = 1893 Score = 54.3 bits (129), Expect(2) = 3e-11 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124 +N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+ Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ P LLFGLREVY+SSE Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025 >dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp. caucasica] Length = 1893 Score = 54.3 bits (129), Expect(2) = 3e-11 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124 +N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+ Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ P LLFGLREVY+SSE Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025 >ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] gi|118577986|sp|Q0ZIW0.1|YCF1_VITVI RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|91701709|gb|ABE47593.1| hypothetical chloroplast RF1 [Vitis vinifera] Length = 1893 Score = 54.3 bits (129), Expect(2) = 3e-11 Identities = 28/45 (62%), Positives = 35/45 (77%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124 +N IH+SSIQIRSM+ TN L E +++DL D TSTIRKKIE I+ Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079 Score = 39.3 bits (90), Expect(2) = 3e-11 Identities = 18/24 (75%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ P LLFGLREVY+SSE Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025 >ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense] gi|403226837|gb|AFR25716.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense] Length = 1805 Score = 51.6 bits (122), Expect(2) = 2e-10 Identities = 29/46 (63%), Positives = 33/46 (71%) Frame = -3 Query: 264 TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 + SN IHESSIQI SMD TN L E + +DL D TSTIRK+IE I Sbjct: 988 SNSNQMIHESSIQIVSMDWTNYSLTEKKKKDLTDRTSTIRKEIEQI 1033 Score = 39.3 bits (90), Expect(2) = 2e-10 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL+K+ PILLFGL E+Y+SSE Sbjct: 955 IIKELSKINPILLFGLSEIYESSE 978 >gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina] Length = 1909 Score = 53.9 bits (128), Expect(2) = 2e-10 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN IHESSIQIRSMD TN L E +++DL D TSTIR +IE I Sbjct: 1053 SNRMIHESSIQIRSMDWTNYSLTEKKMKDLTDRTSTIRNQIERI 1096 Score = 36.6 bits (83), Expect(2) = 2e-10 Identities = 18/24 (75%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I KEL+K PILLF LREVY+SSE Sbjct: 1020 ITKELSKANPILLFRLREVYESSE 1043 >gb|ADD30912.1| putative RF1 protein [Ximenia americana] Length = 1895 Score = 50.1 bits (118), Expect(2) = 2e-10 Identities = 27/44 (61%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN IHESSIQ RSMD T LL E +++DL D T+TIR +IE I Sbjct: 1045 SNRMIHESSIQNRSMDWTKYLLTEKKMKDLTDRTNTIRNQIEII 1088 Score = 40.4 bits (93), Expect(2) = 2e-10 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+K L+KV PILLFGLREVY+SSE Sbjct: 1012 IIKNLSKVNPILLFGLREVYESSE 1035 >ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla] gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1 [Buxus microphylla] Length = 1859 Score = 57.0 bits (136), Expect(2) = 4e-09 Identities = 30/44 (68%), Positives = 35/44 (79%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN IHESSI+IRSMD TN LL E +++DL D T+TIRKKIE I Sbjct: 1009 SNQMIHESSIRIRSMDWTNSLLTEKKMKDLTDRTNTIRKKIERI 1052 Score = 29.3 bits (64), Expect(2) = 4e-09 Identities = 16/24 (66%), Positives = 18/24 (75%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KEL K+ LFGLREVY SSE Sbjct: 980 IIKELNKI----LFGLREVYDSSE 999 >ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis] gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1 [Platanus occidentalis] Length = 1915 Score = 43.5 bits (101), Expect(2) = 7e-09 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%) Frame = -3 Query: 267 TTRSNLFIHESSIQIRSMD*TN*L--LAENQIQDLADWTSTIRKKIETI 127 T SN IHES I+IRS D TN L E ++++LAD TSTIR +IE I Sbjct: 1045 TIISNQIIHESPIRIRSTDWTNYYYSLTEKKMKNLADRTSTIRNQIERI 1093 Score = 42.0 bits (97), Expect(2) = 7e-09 Identities = 19/24 (79%), Positives = 23/24 (95%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KELAK+ PILLFGL+EVY+SSE Sbjct: 1010 IMKELAKINPILLFGLKEVYESSE 1033 >ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana] gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana] Length = 1878 Score = 51.6 bits (122), Expect(2) = 7e-09 Identities = 28/46 (60%), Positives = 32/46 (69%) Frame = -3 Query: 264 TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 + SN IHESSIQ RSMD TN L E + +DL D TSTIR +IE I Sbjct: 1037 SNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1082 Score = 33.9 bits (76), Expect(2) = 7e-09 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I + L+K+ PI LFGLREVY+SSE Sbjct: 1004 IKRILSKINPIQLFGLREVYESSE 1027 >gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua] Length = 1882 Score = 52.8 bits (125), Expect(2) = 2e-08 Identities = 31/60 (51%), Positives = 36/60 (60%) Frame = -3 Query: 306 YTNQVKIKMGKLYTTRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 Y + K L + SN IHESSIQ RSMD TN L E + +DL D TSTIR +IE I Sbjct: 1030 YESSETKKEKDLIISNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1089 Score = 31.2 bits (69), Expect(2) = 2e-08 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = -2 Query: 349 LAKVYPILLFGLREVYKSSE 290 L+K PI LFGLREVY+SSE Sbjct: 1015 LSKRNPIQLFGLREVYESSE 1034 >ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera] gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName: Full=Putative membrane protein ycf1; Short=RF1 gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1 [Liriodendron tulipifera] Length = 1835 Score = 46.6 bits (109), Expect(2) = 2e-08 Identities = 25/44 (56%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 +N HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 994 NNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1037 Score = 37.4 bits (85), Expect(2) = 2e-08 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PILLFGLR+VY+ +E Sbjct: 963 IIKEFAKVNPILLFGLRKVYEPNE 986 >gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862561|gb|AEX98641.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis] gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1| Ycf1 [Magnolia denudata] Length = 1863 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 990 IIKEFAKVNPIFLFGLRKVYEPNE 1013 >ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia] Length = 1858 Score = 47.8 bits (112), Expect(2) = 3e-08 Identities = 26/44 (59%), Positives = 32/44 (72%) Frame = -3 Query: 258 SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127 SN HES I+IRS+D TN L E +++DLAD T+TIR KIE I Sbjct: 1015 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1058 Score = 35.8 bits (81), Expect(2) = 3e-08 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = -2 Query: 361 ILKELAKVYPILLFGLREVYKSSE 290 I+KE AKV PI LFGLR+VY+ +E Sbjct: 984 IIKEFAKVNPIFLFGLRKVYEPNE 1007