BLASTX nr result

ID: Akebia22_contig00055500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00055500
         (449 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [...    54   3e-11
dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Viti...    54   3e-11
dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Viti...    54   3e-11
dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Viti...    54   3e-11
ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera] g...    54   3e-11
ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) ...    52   2e-10
gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]          54   2e-10
gb|ADD30912.1| putative RF1 protein [Ximenia americana]                50   2e-10
ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphy...    57   4e-09
ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occident...    44   7e-09
ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) ...    52   7e-09
gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]          53   2e-08
ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tuli...    47   2e-08
gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein ...    48   3e-08
gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast)...    48   3e-08
ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chlorop...    48   3e-08
ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [...    48   3e-08
gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast)...    48   3e-08
ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|34...    48   3e-08
ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) ...    48   3e-08

>ref|YP_009019849.1| hypothetical chloroplast RF1 (chloroplast) [Vitis rotundifolia]
            gi|586947471|gb|AHJ91268.1| hypothetical chloroplast RF1
            (chloroplast) [Vitis rotundifolia]
          Length = 1893

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
            +N  IH+SSIQIRSM+ TN  L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025


>dbj|BAO01719.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
            caucasica]
          Length = 1893

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
            +N  IH+SSIQIRSM+ TN  L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025


>dbj|BAO01635.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
            caucasica]
          Length = 1893

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
            +N  IH+SSIQIRSM+ TN  L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025


>dbj|BAO01551.1| hypothetical chloroplast RF1 (chloroplast) [Vitis vinifera subsp.
            caucasica]
          Length = 1893

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
            +N  IH+SSIQIRSM+ TN  L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025


>ref|YP_567136.1| hypothetical chloroplast RF1 [Vitis vinifera]
            gi|118577986|sp|Q0ZIW0.1|YCF1_VITVI RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|91701709|gb|ABE47593.1| hypothetical chloroplast RF1
            [Vitis vinifera]
          Length = 1893

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETIL 124
            +N  IH+SSIQIRSM+ TN  L E +++DL D TSTIRKKIE I+
Sbjct: 1035 NNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKII 1079



 Score = 39.3 bits (90), Expect(2) = 3e-11
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+ P LLFGLREVY+SSE
Sbjct: 1002 IIKELLKINPTLLFGLREVYESSE 1025


>ref|YP_008963536.1| hypothetical chloroplast RF19 (chloroplast) [Penthorum chinense]
            gi|403226837|gb|AFR25716.1| hypothetical chloroplast RF19
            (chloroplast) [Penthorum chinense]
          Length = 1805

 Score = 51.6 bits (122), Expect(2) = 2e-10
 Identities = 29/46 (63%), Positives = 33/46 (71%)
 Frame = -3

Query: 264  TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            + SN  IHESSIQI SMD TN  L E + +DL D TSTIRK+IE I
Sbjct: 988  SNSNQMIHESSIQIVSMDWTNYSLTEKKKKDLTDRTSTIRKEIEQI 1033



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL+K+ PILLFGL E+Y+SSE
Sbjct: 955  IIKELSKINPILLFGLSEIYESSE 978


>gb|ADD30913.1| putative RF1 protein [Berberidopsis corallina]
          Length = 1909

 Score = 53.9 bits (128), Expect(2) = 2e-10
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN  IHESSIQIRSMD TN  L E +++DL D TSTIR +IE I
Sbjct: 1053 SNRMIHESSIQIRSMDWTNYSLTEKKMKDLTDRTSTIRNQIERI 1096



 Score = 36.6 bits (83), Expect(2) = 2e-10
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I KEL+K  PILLF LREVY+SSE
Sbjct: 1020 ITKELSKANPILLFRLREVYESSE 1043


>gb|ADD30912.1| putative RF1 protein [Ximenia americana]
          Length = 1895

 Score = 50.1 bits (118), Expect(2) = 2e-10
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN  IHESSIQ RSMD T  LL E +++DL D T+TIR +IE I
Sbjct: 1045 SNRMIHESSIQNRSMDWTKYLLTEKKMKDLTDRTNTIRNQIEII 1088



 Score = 40.4 bits (93), Expect(2) = 2e-10
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+K L+KV PILLFGLREVY+SSE
Sbjct: 1012 IIKNLSKVNPILLFGLREVYESSE 1035


>ref|YP_001294243.1| hypothetical chloroplast RF1 [Buxus microphylla]
            gi|182702240|sp|A6MM95.1|YCF1_BUXMI RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|146762344|gb|ABQ45308.1| hypothetical chloroplast RF1
            [Buxus microphylla]
          Length = 1859

 Score = 57.0 bits (136), Expect(2) = 4e-09
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN  IHESSI+IRSMD TN LL E +++DL D T+TIRKKIE I
Sbjct: 1009 SNQMIHESSIRIRSMDWTNSLLTEKKMKDLTDRTNTIRKKIERI 1052



 Score = 29.3 bits (64), Expect(2) = 4e-09
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KEL K+    LFGLREVY SSE
Sbjct: 980  IIKELNKI----LFGLREVYDSSE 999


>ref|YP_740623.1| hypothetical chloroplast RF1 [Platanus occidentalis]
            gi|118574761|sp|Q09FY8.1|YCF1_PLAOC RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|114054443|gb|ABI49837.1| hypothetical chloroplast RF1
            [Platanus occidentalis]
          Length = 1915

 Score = 43.5 bits (101), Expect(2) = 7e-09
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
 Frame = -3

Query: 267  TTRSNLFIHESSIQIRSMD*TN*L--LAENQIQDLADWTSTIRKKIETI 127
            T  SN  IHES I+IRS D TN    L E ++++LAD TSTIR +IE I
Sbjct: 1045 TIISNQIIHESPIRIRSTDWTNYYYSLTEKKMKNLADRTSTIRNQIERI 1093



 Score = 42.0 bits (97), Expect(2) = 7e-09
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KELAK+ PILLFGL+EVY+SSE
Sbjct: 1010 IMKELAKINPILLFGLKEVYESSE 1033


>ref|YP_008963750.1| hypothetical chloroplast RF19 (chloroplast) [Liquidambar formosana]
            gi|491650429|gb|AGL13489.1| hypothetical chloroplast RF19
            (chloroplast) [Liquidambar formosana]
          Length = 1878

 Score = 51.6 bits (122), Expect(2) = 7e-09
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -3

Query: 264  TRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            + SN  IHESSIQ RSMD TN  L E + +DL D TSTIR +IE I
Sbjct: 1037 SNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1082



 Score = 33.9 bits (76), Expect(2) = 7e-09
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I + L+K+ PI LFGLREVY+SSE
Sbjct: 1004 IKRILSKINPIQLFGLREVYESSE 1027


>gb|ADD30919.1| putative RF1 protein [Liquidambar styraciflua]
          Length = 1882

 Score = 52.8 bits (125), Expect(2) = 2e-08
 Identities = 31/60 (51%), Positives = 36/60 (60%)
 Frame = -3

Query: 306  YTNQVKIKMGKLYTTRSNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            Y +    K   L  + SN  IHESSIQ RSMD TN  L E + +DL D TSTIR +IE I
Sbjct: 1030 YESSETKKEKDLIISNSNRIIHESSIQFRSMDWTNYSLIEKKTKDLTDRTSTIRNQIEKI 1089



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 349  LAKVYPILLFGLREVYKSSE 290
            L+K  PI LFGLREVY+SSE
Sbjct: 1015 LSKRNPIQLFGLREVYESSE 1034


>ref|YP_740260.1| hypothetical chloroplast RF1 [Liriodendron tulipifera]
            gi|118574755|sp|Q0G9G1.1|YCF1_LIRTU RecName:
            Full=Putative membrane protein ycf1; Short=RF1
            gi|113201052|gb|ABI32567.1| hypothetical chloroplast RF1
            [Liriodendron tulipifera]
          Length = 1835

 Score = 46.6 bits (109), Expect(2) = 2e-08
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            +N   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 994  NNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1037



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PILLFGLR+VY+ +E
Sbjct: 963  IIKEFAKVNPILLFGLRKVYEPNE 986


>gb|AEX98809.1| photosystem I assembly protein Ycf1-like protein (chloroplast)
            [Magnolia officinalis subsp. biloba]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>gb|AEX98725.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
            officinalis subsp. biloba]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>ref|YP_007474509.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia
            officinalis subsp. biloba] gi|372862561|gb|AEX98641.1|
            photosystem I assembly protein Ycf1 (chloroplast)
            [Magnolia officinalis subsp. biloba]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>ref|YP_007474425.1| hypothetical chloroplast RF1 (chloroplast) [Magnolia officinalis]
            gi|372862476|gb|AEX98557.1| hypothetical chloroplast RF1
            (chloroplast) [Magnolia officinalis]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>gb|AEX98391.1| photosystem I assembly protein Ycf1 (chloroplast) [Magnolia denudata]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>ref|YP_006576172.1| Ycf1 (chloroplast) [Magnolia denudata] gi|343887596|gb|AEM65275.1|
            Ycf1 [Magnolia denudata]
          Length = 1863

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1021 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1064



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 990  IIKEFAKVNPIFLFGLRKVYEPNE 1013


>ref|YP_008993750.1| hypothetical chloroplast RF19 (chloroplast) [Magnolia salicifolia]
          Length = 1858

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = -3

Query: 258  SNLFIHESSIQIRSMD*TN*LLAENQIQDLADWTSTIRKKIETI 127
            SN   HES I+IRS+D TN  L E +++DLAD T+TIR KIE I
Sbjct: 1015 SNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERI 1058



 Score = 35.8 bits (81), Expect(2) = 3e-08
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 361  ILKELAKVYPILLFGLREVYKSSE 290
            I+KE AKV PI LFGLR+VY+ +E
Sbjct: 984  IIKEFAKVNPIFLFGLRKVYEPNE 1007


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