BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00055202
         (474 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus]              55   1e-05

>dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus]
          Length = 489

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
 Frame = +3

Query: 18  KEKEAARAKLSRLQICKLGYIEEYSNSFLDLYYFCEDRS-DDLKDEYFRKTPLIGETLRK 194
           +E+E A+ ++++LQ+C + Y+EE++  +    Y  E        ++Y  K P+IGE    
Sbjct: 240 EEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALT 299

Query: 195 DYESFEGFNGTKDNSIGERINFTLAQLKYKQTALKDQKLATKALKQLNLGRDNRDENIPV 374
            +      NGT   S+G    F    +K + + + D     K LK+ N    +  E  PV
Sbjct: 300 RFR--HEANGTSIYSLG----FAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-APV 352

Query: 375 QWGCRESKKSYKKPKRYHRIPEK--GDFRPYKRKR 473
           ++GC+++ K     K+YH+  +K    ++PYK+K+
Sbjct: 353 EYGCKKTSK-----KKYHKRYKKKYKAYKPYKKKK 382