BLASTX nr result
ID: Akebia22_contig00055202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia22_contig00055202 (474 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus] 55 1e-05 >dbj|BAO53574.1| capsid protein [Cauliflower mosaic virus] Length = 489 Score = 55.1 bits (131), Expect = 1e-05 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 3/155 (1%) Frame = +3 Query: 18 KEKEAARAKLSRLQICKLGYIEEYSNSFLDLYYFCEDRS-DDLKDEYFRKTPLIGETLRK 194 +E+E A+ ++++LQ+C + Y+EE++ + Y E ++Y K P+IGE Sbjct: 240 EEQEKAKIRMTKLQLCDICYLEEFTCDYEKNMYKTELADFPGYINQYLSKIPIIGEKALT 299 Query: 195 DYESFEGFNGTKDNSIGERINFTLAQLKYKQTALKDQKLATKALKQLNLGRDNRDENIPV 374 + NGT S+G F +K + + + D K LK+ N + E PV Sbjct: 300 RFR--HEANGTSIYSLG----FAAKIVKEELSKICDLSKKQKKLKKFNKKCCSIGE-APV 352 Query: 375 QWGCRESKKSYKKPKRYHRIPEK--GDFRPYKRKR 473 ++GC+++ K K+YH+ +K ++PYK+K+ Sbjct: 353 EYGCKKTSK-----KKYHKRYKKKYKAYKPYKKKK 382