BLASTX nr result
ID: Akebia22_contig00052390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00052390
(264 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily pr... 49 5e-08
ref|XP_003591719.1| Pentatricopeptide repeat-containing protein ... 59 1e-07
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat... 47 8e-07
ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat... 54 1e-06
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_003599547.1| Pentatricopeptide repeat-containing protein ... 54 2e-06
gb|EYU46490.1| hypothetical protein MIMGU_mgv11b018784mg [Mimulu... 43 4e-06
>ref|XP_007029330.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508717935|gb|EOY09832.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 747
Score = 49.3 bits (116), Expect(2) = 5e-08
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 29 TPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITF 139
T + LINC+CHL VDFGFS++ +LK GYK +TF
Sbjct: 127 TLNILINCFCHLRRVDFGFSVLGKMLKLGYKPHLVTF 163
Score = 33.5 bits (75), Expect(2) = 5e-08
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQAGELLNKMI 215
+F+TL+KG +E K+AQA L N+M+
Sbjct: 162 TFSTLVKGFCMEHKVAQAARLFNEMV 187
>ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 524
Score = 58.5 bits (140), Expect(2) = 1e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2
Query: 14 TPAIITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTIT 136
TP+I+T +T+INCYCHL +DF FS++ ILK GY DTIT
Sbjct: 80 TPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTIT 120
Score = 22.7 bits (47), Expect(2) = 1e-07
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQA 191
+ TTLIKGL L K+ +A
Sbjct: 120 TLTTLIKGLCLNGKVHEA 137
>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 47.4 bits (111), Expect(2) = 8e-07
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2
Query: 23 IITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITF 139
+ T + +IN +CHLN VDFGFS++ I K G++ DT TF
Sbjct: 109 VYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATF 147
Score = 31.2 bits (69), Expect(2) = 8e-07
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQAGELLNKMI 215
+FTTLI+GL +E KI +A L +KM+
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMV 171
>ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 53.5 bits (127), Expect(2) = 1e-06
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 17 PAIITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITF 139
P +IT + LINC+CH+ + FGFS++ ILK GY+ TITF
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITF 132
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQAGELLNKMI 215
+FTTLIKGL L+ ++ +A +K++
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLL 156
>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product
[Vitis vinifera]
Length = 627
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 17 PAIITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITFLYHTD*GTLLGR*NRSSGG 196
P IT + LINCYC+LN VDFG +++ +L+ G+ +T+TF G LG + G
Sbjct: 125 PDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK-GLCLGSRISEATG 183
Query: 197 VAQQNDKEHC*PDVITYRTIIN 262
+ ++ + P+V+TY T++N
Sbjct: 184 LLRKMVRMGYRPNVVTYGTLLN 205
>ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 636
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 14 TPAIITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITF 139
TP I T + LINCYCH+ ++F FS++ ILK GY+ DTITF
Sbjct: 100 TPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141
Score = 23.5 bits (49), Expect(2) = 2e-06
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQA 191
+F TLIKGL L K+ +A
Sbjct: 140 TFNTLIKGLCLNGKVKEA 157
>gb|EYU46490.1| hypothetical protein MIMGU_mgv11b018784mg [Mimulus guttatus]
Length = 612
Score = 43.1 bits (100), Expect(2) = 4e-06
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 17 PAIITPSTLINCYCHLNIVDFGFSIIPSILKHGYKMDTITF 139
P I L+NCYC L V GF+++ I+K GYK + +TF
Sbjct: 113 PDYIGMHILLNCYCDLKRVGLGFAVVGGIIKRGYKPNIVTF 153
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 138 SFTTLIKGLYLEDKIAQAGELLNKMI 215
+FT+LIKGL LEDK+ A LL K+I
Sbjct: 152 TFTSLIKGLCLEDKLGDALSLLRKII 177