BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia22_contig00052096
         (318 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF81447.1| NBS type disease resistance protein [Populus tric...    48   4e-08
gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wal...    53   5e-07
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...    54   1e-06
gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis c...    54   1e-06
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...    53   2e-06
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...    53   2e-06
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...    53   2e-06
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...    53   2e-06
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]        52   2e-06
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]       50   2e-06
gb|AGW47867.1| polyprotein [Phaseolus vulgaris]                        45   2e-06
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    53   2e-06
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    53   2e-06
gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis c...    53   2e-06
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...    53   2e-06
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...    53   3e-06
gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]       52   3e-06
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]       49   3e-06
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              52   4e-06
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...    52   4e-06

>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 972

 Score = 48.1 bits (113), Expect(2) = 4e-08
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFLIVILIST---------- 172
           + GID+ +V APVAR++ +R +ISL A+++ KI +      FL   L             
Sbjct: 57  REGIDYGEVFAPVARLETIRLMISLAAQHRWKIYQLDVKSAFLNGFLEEEIYVEQPLGYI 116

Query: 171 ------NTTSIKKALYGYKHAPKAWNTRL 103
                     +KKALYG K AP AWNTR+
Sbjct: 117 EAENKGKVYKLKKALYGLKQAPPAWNTRI 145



 Score = 34.7 bits (78), Expect(2) = 4e-08
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           QDNGF++CPY+ A+Y+ +  NG + + AC
Sbjct: 150 QDNGFEKCPYEHAIYVKKGANG-SILFAC 177


>gb|AGH20673.1| reverse transcriptase, partial [Crucihimalaya wallichii]
          Length = 315

 Score = 52.8 bits (125), Expect(2) = 5e-07
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           K GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  KAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KK LYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKTLYGLKQAPRAWNTRI 159



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  N  ++AC
Sbjct: 164 KEKKFIKCPYEHALYIK--IQNNDLLIAC 190


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RTGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDFEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEENKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 1e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AGH20677.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 286

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNEWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           +         +KKALYG K AP+AWNTR+
Sbjct: 131 IKGEEDKVLKLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 1e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera] gi|389595484|gb|AFK88545.1| reverse
           transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 17/87 (19%)
 Frame = -1

Query: 312 GIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------IVI 184
           GID+ +V APVAR++ VR IISL A+N+ +I +      FL                IV 
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 LISTNTTSIKKALYGYKHAPKAWNTRL 103
                   +KKALYG K AP+AWNTR+
Sbjct: 133 GKEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+      N  ++AC
Sbjct: 164 KEKSFIKCPYEHALYIK--TQNNNILIAC 190


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+   KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           +D  F +CPY+ ALY+      N  ++AC
Sbjct: 164 KDKSFIKCPYEHALYIK--TQNNDILIAC 190


>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
          Length = 1471

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318  KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFLIVILIST---------- 172
            K GID+ +V APV R++ +R +IS  A+ +  I +      FL  +L             
Sbjct: 909  KEGIDYDEVFAPVVRMETIRLLISQAAQFKWPIFQMDVKSAFLNGVLEEEVYIEQPPGYM 968

Query: 171  ------NTTSIKKALYGYKHAPKAWNTRL 103
                      +KKALYG K AP+AWNTR+
Sbjct: 969  KIGEEKKVLKLKKALYGLKQAPRAWNTRI 997



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -2

Query: 95   QDNGFKQCPYKQALYLGRIINGNTTIVA 12
            ++NGFKQCPY+ ALY  +   GN   VA
Sbjct: 1002 KENGFKQCPYEHALY-AKNNGGNMIFVA 1028


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318  KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
            + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 910  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 969

Query: 189  VILISTNTTSIKKALYGYKHAPKAWNTRL 103
            V         +KKALYG K AP+AWNTR+
Sbjct: 970  VKGEEDKVLRLKKALYGLKQAPRAWNTRI 998



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 95   QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
            ++  F +CPY+ ALY+   I     ++AC
Sbjct: 1003 KEKDFIKCPYEHALYIK--IQKEDILIAC 1029


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318  KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
            + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 878  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 937

Query: 189  VILISTNTTSIKKALYGYKHAPKAWNTRL 103
            V         +KKALYG K AP+AWNTR+
Sbjct: 938  VKGEEDKVLRLKKALYGLKQAPRAWNTRI 966



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 95   QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
            ++  F +CPY+ ALY+   I     ++AC
Sbjct: 971  KEKDFIKCPYEHALYIK--IQKEDILIAC 997


>gb|AGH20676.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N  KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEAKVLKLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEQDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V AP+AR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 2e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 53.1 bits (126), Expect(2) = 3e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 83  FKQCPYKQALYLGRIINGNTTIVAC 9
           F +CPY+ ALY+   I  +  ++AC
Sbjct: 168 FIKCPYEHALYIK--IQKDDILIAC 190


>gb|AGH20669.1| reverse transcriptase, partial [Lepidium sativum]
          Length = 315

 Score = 51.6 bits (122), Expect(2) = 3e-06
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ +I +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWRIHQMDVKSAFLNGDLNEEVYIEQPQGFI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           +         +KKALYG K AP+AWNTR+
Sbjct: 131 IKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+      N  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--TQNNDILIAC 190


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 35/89 (39%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+   +I +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP+AWNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRAWNTRI 159



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 92  DNGFKQCPYKQALYLGRIINGNTTIVAC 9
           + GF +CPY+ ALY+      N  ++AC
Sbjct: 165 EKGFIKCPYEHALYIK--TQNNDILIAC 190


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 52.4 bits (124), Expect(2) = 4e-06
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318  KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
            + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 849  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDFKLAFLNGDFEEEVYIEQPQGYI 908

Query: 189  VILISTNTTSIKKALYGYKHAPKAWNTRL 103
            V         +KKALYG K AP+AWNTR+
Sbjct: 909  VKGEEDKVLRLKKALYGLKQAPRAWNTRI 937



 Score = 23.9 bits (50), Expect(2) = 4e-06
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 95   QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
            ++  F +CPY+ ALY+   I     ++AC
Sbjct: 942  KEKDFIKCPYEHALYIK--IQKEDILIAC 968


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score = 52.0 bits (123), Expect(2) = 4e-06
 Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
 Frame = -1

Query: 318 KRGIDHKDV-APVARIKIVRSIISLPAKNQ*KIVK*T*NQPFL----------------I 190
           + GID+ +V APVAR++ VR IISL A+N+ KI +      FL                I
Sbjct: 71  RAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYI 130

Query: 189 VILISTNTTSIKKALYGYKHAPKAWNTRL 103
           V         +KKALYG K AP++WNTR+
Sbjct: 131 VKGEEDKVLRLKKALYGLKQAPRSWNTRI 159



 Score = 24.3 bits (51), Expect(2) = 4e-06
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 95  QDNGFKQCPYKQALYLGRIINGNTTIVAC 9
           ++  F +CPY+ ALY+   I  +  ++AC
Sbjct: 164 KEKDFIKCPYEHALYIK--IQKDDILIAC 190