BLASTX nr result
ID: Akebia22_contig00051051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia22_contig00051051
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 97 9e-23
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 96 2e-22
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part... 98 3e-22
ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, part... 95 1e-20
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 94 2e-20
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 93 5e-20
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera] 98 5e-20
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 94 1e-19
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 93 1e-19
ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203... 100 3e-19
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par... 90 3e-19
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 90 3e-19
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 90 3e-19
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 91 3e-19
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 90 3e-19
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 92 3e-19
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 90 3e-19
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 92 3e-19
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 90 4e-19
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 92 5e-19
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 97.1 bits (240), Expect(3) = 9e-23
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D G V+ CYTC+ +K Q Q LY PLP+ N + L+MDF+LG + RG+DSVF
Sbjct: 1134 LKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVF 1193
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA I C+KT D +NIA LF R+
Sbjct: 1194 VVVDRFSKMAHFIACRKTADASNIAKLFFRE 1224
Score = 30.0 bits (66), Expect(3) = 9e-23
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHF 383
F +VVRLH V ITS + KF+SHF
Sbjct: 1221 FFREVVRLHGVPTSITSDRDTKFLSHF 1247
Score = 25.4 bits (54), Expect(3) = 9e-23
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 17 VEERYYWMQLKR 52
+EER+YW QLKR
Sbjct: 1125 MEERFYWPQLKR 1136
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 95.9 bits (237), Expect(3) = 2e-22
Identities = 49/91 (53%), Positives = 62/91 (68%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D G V+ CYTC+ +K Q Q LY PLP+ N + L+MDF+LGF + R +DSVF
Sbjct: 1142 LKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGFPRTQRRVDSVF 1201
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV DRFSKMA I CKKT D +NIA LF R+
Sbjct: 1202 VVADRFSKMAHFIACKKTADASNIAKLFFRE 1232
Score = 30.0 bits (66), Expect(3) = 2e-22
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHF 383
F +VVRLH V ITS + KF+SHF
Sbjct: 1229 FFREVVRLHGVPTSITSDRDTKFLSHF 1255
Score = 25.4 bits (54), Expect(3) = 2e-22
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 17 VEERYYWMQLKR 52
+EER+YW QLKR
Sbjct: 1133 MEERFYWPQLKR 1144
>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
gi|462408434|gb|EMJ13768.1| hypothetical protein
PRUPE_ppa015570mg, partial [Prunus persica]
Length = 541
Score = 97.8 bits (242), Expect(3) = 3e-22
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D G V+ CYTC+ +K Q Q LY PLP+ N + L+MDF+LG + RG+DSVF
Sbjct: 241 LKRDVGTIVRKCYTCQTSKGQVQNTGLYVPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVF 300
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA I CKKT D +NIA LF R+
Sbjct: 301 VVVDRFSKMAHFIACKKTDDASNIAKLFFRE 331
Score = 29.6 bits (65), Expect(3) = 3e-22
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHF 383
F +VVRLH + ITS + KF+SHF
Sbjct: 328 FFREVVRLHGIPTSITSDRDTKFLSHF 354
Score = 23.1 bits (48), Expect(3) = 3e-22
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 17 VEERYYWMQLKR 52
+EE +YW QLKR
Sbjct: 232 MEETFYWPQLKR 243
>ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]
gi|462395598|gb|EMJ01397.1| hypothetical protein
PRUPE_ppa016013mg, partial [Prunus persica]
Length = 1057
Score = 94.7 bits (234), Expect(2) = 1e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D G V+ CYTC+ +K Q Q LY PLP+ N + L+MDF+LG + G+DSVF
Sbjct: 700 LKRDIGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQSGVDSVF 759
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKM I CKKT D +NIA LF R+
Sbjct: 760 VVVDRFSKMTHFIACKKTADASNIAKLFFRE 790
Score = 30.4 bits (67), Expect(2) = 1e-20
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHF 383
F +VVRLH V ITS + KF+SHF
Sbjct: 787 FFREVVRLHGVPTSITSNRDTKFLSHF 813
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 94.4 bits (233), Expect(2) = 2e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D GRFV C TC+ AK + LY PLP+ P + +SMDF+LG + RG DS+F
Sbjct: 1227 MRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIF 1286
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC KT D ++IA+LF R+
Sbjct: 1287 VVVDRFSKMAHFIPCHKTDDASHIADLFFRE 1317
Score = 30.4 bits (67), Expect(2) = 2e-20
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1314 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1344
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 92.8 bits (229), Expect(2) = 5e-20
Identities = 46/91 (50%), Positives = 60/91 (65%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D GRFV C TC+ AK + LY PLP+ P + +SMDF+LG + RG DS+F
Sbjct: 1206 MRRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIF 1265
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKM IPC KT D ++IA+LF R+
Sbjct: 1266 VVVDRFSKMVHFIPCHKTDDASHIADLFFRE 1296
Score = 30.4 bits (67), Expect(2) = 5e-20
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1293 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1323
>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
Length = 866
Score = 97.8 bits (242), Expect(2) = 5e-20
Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D GRFVQ C C+ AK Q Q LYTPLP+ + L MDF+LG + RG+DSV
Sbjct: 549 LKRDVGRFVQRCLVCQKAKGQVQNTGLYTPLPVPETIWQDLIMDFVLGLPRTQRGVDSVL 608
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRKWFVCIMYKKKSLHIVRTS-----LLAILS 387
VV+D+F KM +PCKKT + + +ANLF R+ I++ L + ++ L
Sbjct: 609 VVVDQFFKMVHFLPCKKTSNASYVANLFFRE----IVHLHGILRSITSNRDVKFLSHFWR 664
Query: 388 ALWK*FDRSL*YNST 432
LWK FD SL Y++T
Sbjct: 665 TLWKLFDTSLKYSNT 679
Score = 25.4 bits (54), Expect(2) = 5e-20
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 17 VEERYYWMQLKR 52
V+ER+YW QLKR
Sbjct: 540 VDERFYWPQLKR 551
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 93.6 bits (231), Expect(2) = 1e-19
Identities = 48/91 (52%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
++ D R + C TCK AK +SQ LYTPLPI + P +SMDF++G + G DS+F
Sbjct: 1418 MKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIF 1477
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC KT D +IANLF R+
Sbjct: 1478 VVVDRFSKMAHFIPCHKTDDAIHIANLFFRE 1508
Score = 28.1 bits (61), Expect(2) = 1e-19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F +VVRLH + K I S + KF+S+F ++L
Sbjct: 1505 FFREVVRLHGMPKTIVSDRDTKFLSYFWKTL 1535
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 93.2 bits (230), Expect(2) = 1e-19
Identities = 44/92 (47%), Positives = 63/92 (68%)
Frame = +1
Query: 40 AIEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSV 219
++ +D + YC CK AK ++ LYTPLP+ N+P +SMDF+LG + G DS+
Sbjct: 1179 SMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNSPWIDISMDFILGLPRTKYGKDSI 1238
Query: 220 FVVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
FVV+DRFSKMA IPCKKT D +++A+LF ++
Sbjct: 1239 FVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1270
Score = 28.5 bits (62), Expect(2) = 1e-19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F+ +VV+LH + + I S + KF+SHF R L
Sbjct: 1267 FVKEVVKLHGIPRTIVSDRDAKFLSHFWRIL 1297
>ref|XP_004140807.1| PREDICTED: uncharacterized protein LOC101203557 [Cucumis sativus]
Length = 1406
Score = 100 bits (248), Expect = 3e-19
Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 4/133 (3%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D F++ C C+ AK SQ LYTPLPI + + LSMDF+LG + RG DSVF
Sbjct: 1151 LNRDVTNFIKRCSICQTAKGNSQNTGLYTPLPIPSTIWEDLSMDFVLGLPRTQRGHDSVF 1210
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRKWFVCIMYKKKSLHIVRTSLLAILS----A 390
VV+DRFSKMA IPCKKT D NIANLF R+ + IV + LS +
Sbjct: 1211 VVVDRFSKMAHFIPCKKTFDALNIANLFFRE---IVRLHGIPKTIVSDRDVKFLSHFWRS 1267
Query: 391 LWK*FDRSL*YNS 429
LWK FD +L +++
Sbjct: 1268 LWKKFDTNLLFST 1280
>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 89.7 bits (221), Expect(3) = 3e-19
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D R V+ C C K +Q LY PLP +AP HLSMDF+LG + +G DS+F
Sbjct: 503 MRRDVERLVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSIF 562
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC +T D T+IA LF R+
Sbjct: 563 VVVDRFSKMAHFIPCFRTSDATHIAELFFRE 593
Score = 27.3 bits (59), Expect(3) = 3e-19
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH + I S + KF+ HF R+L
Sbjct: 590 FFREIVRLHGIPTSIVSDRDVKFMGHFWRTL 620
Score = 23.5 bits (49), Expect(3) = 3e-19
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +2
Query: 5 SLIQVEERYYWMQLKRTLD 61
+L V +RYYW +++R ++
Sbjct: 490 TLAMVADRYYWPKMRRDVE 508
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 90.1 bits (222), Expect(2) = 3e-19
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+F
Sbjct: 1255 MRRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIF 1314
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC K+ D T++A+LF R+
Sbjct: 1315 VVVDRFSKMAHFIPCHKSDDATHVADLFFRE 1345
Score = 30.4 bits (67), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1372
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 90.1 bits (222), Expect(2) = 3e-19
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+F
Sbjct: 1151 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIF 1210
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC K+ D T++A+LF R+
Sbjct: 1211 VVVDRFSKMAHFIPCHKSDDATHVADLFFRE 1241
Score = 30.4 bits (67), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1238 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1268
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 90.9 bits (224), Expect(2) = 3e-19
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D R V C TC+ AK + LY PLP+ +AP + +SMDF+LG + +G DSVF
Sbjct: 1230 MRRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSVF 1289
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC KT D T+IA+LF R+
Sbjct: 1290 VVVDRFSKMAHFIPCHKTDDATHIADLFFRE 1320
Score = 29.6 bits (65), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1317 FFREIVRLHGVPNTIVSDRDAKFLSHFWRTL 1347
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 90.1 bits (222), Expect(2) = 3e-19
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+F
Sbjct: 1255 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIF 1314
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC K+ D T++A+LF R+
Sbjct: 1315 VVVDRFSKMAHFIPCHKSDDATHVADLFFRE 1345
Score = 30.4 bits (67), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1372
>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 92.0 bits (227), Expect(2) = 3e-19
Identities = 44/92 (47%), Positives = 62/92 (67%)
Frame = +1
Query: 40 AIEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSV 219
++ +D + YC CK AK ++ LYTPLP+ N P +SMDF+LG + G DS+
Sbjct: 1179 SMRKDVEKVCSYCLECKQAKSRTLPHGLYTPLPVSNFPWIDISMDFILGLPRTKYGKDSI 1238
Query: 220 FVVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
FVV+DRFSKMA IPCKKT D +++A+LF ++
Sbjct: 1239 FVVVDRFSKMARFIPCKKTNDASHVADLFVKE 1270
Score = 28.5 bits (62), Expect(2) = 3e-19
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F+ +VV+LH + + I S + KF+SHF R L
Sbjct: 1267 FVKEVVKLHGIPRTIVSDRDAKFLSHFWRIL 1297
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 90.1 bits (222), Expect(2) = 3e-19
Identities = 44/91 (48%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+F
Sbjct: 568 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIF 627
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC K+ D T++A+LF R+
Sbjct: 628 VVVDRFSKMAHFIPCHKSDDATHVADLFFRE 658
Score = 30.4 bits (67), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 655 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 685
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 92.4 bits (228), Expect(2) = 3e-19
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+F
Sbjct: 43 MRRDVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIF 102
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLFCRK 315
VV+DRFSKMA IPC K+ D TNIA+LF R+
Sbjct: 103 VVVDRFSKMAHFIPCHKSDDATNIADLFFRE 133
Score = 28.1 bits (61), Expect(2) = 3e-19
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F +V+RLH V I S + KF SHF R+L
Sbjct: 130 FFREVIRLHGVPTTIVSDRDAKFPSHFWRTL 160
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 89.7 bits (221), Expect(2) = 4e-19
Identities = 44/88 (50%), Positives = 60/88 (68%)
Frame = +1
Query: 52 DFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVFVVI 231
D RFV C TC+ AK + LY PLP+ + P + +SMDF+LG + +G DS+FVV+
Sbjct: 1258 DVERFVARCTTCQKAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVV 1317
Query: 232 DRFSKMALLIPCKKTMDDTNIANLFCRK 315
DRFSKMA IPC K+ D T++A+LF R+
Sbjct: 1318 DRFSKMAHFIPCHKSDDATHVADLFFRE 1345
Score = 30.4 bits (67), Expect(2) = 4e-19
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH V I S + KF+SHF R+L
Sbjct: 1342 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTL 1372
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 92.0 bits (227), Expect(2) = 5e-19
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = +1
Query: 43 IEEDFGRFVQYCYTCKAAKCQSQTIRLYTPLPILNAP*KHLSMDFMLGFSCSPRGLDSVF 222
+ D R VQ C TC AK + LYTPLP+ +AP + +SMDF+LG + RG DS+F
Sbjct: 1230 MRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIF 1289
Query: 223 VVIDRFSKMALLIPCKKTMDDTNIANLF 306
VV+DRFSKMA IPC K+ D ++IA+LF
Sbjct: 1290 VVVDRFSKMAHFIPCHKSDDASHIASLF 1317
Score = 27.7 bits (60), Expect(2) = 5e-19
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 303 FL*KVVRLHYVQKKITSYCENKFVSHFERSL 395
F ++VRLH + K I S + KF+S+F ++L
Sbjct: 1317 FFSEIVRLHGMPKTIVSDRDTKFLSYFWKTL 1347